Spg008578 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg008578
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibonuclease H
Locationscaffold10: 31194142 .. 31200289 (+)
RNA-Seq ExpressionSpg008578
SyntenySpg008578
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTGAGTGTGTTTCACTGGCTAGAACGCTTGTTCTCGAGTCTGAAGCTTCGATTGATTCTTGGAGTCTTGAAGTCTTTGAGTGATCTTGAAGGGTCTTCGGTCTTCAAGAAGTGTTCAGTACTTAGGAACTTATGGATTTTAGAGAGTCTTCAGTGTTGGTGGAGTCTCTTTGAATTCTCTGGTCCTGGCTGAGAGTTCAAAATTTCTGAACACTAGAAATGGAGAAGAGCTCCTCTATTTATAGAGTTTTCCATGCGTAGGTAGGTTTGGACTTGGATGAGTTTTGAGCCTAGTCATTTGAATTTGGGTTTTATTGACTTTAGGTCTAACCATTTGGATTTGGGTTTGGTTTAAATTTGAGTCAAATACCATATGACCCAATTTTGATCAAACTAGCTGGGTCATTTTAAAATAGCTGTTTTGAAAAAGGGCCATTTGTGTTTTCATTCTGAGAAATGGCCAAAAGCTAATTTGTGTAAATTCTTTTGGCAACAAAGTGGACGAAAATACCCCAACCAAAATCTTAATTCATACATAAATTAAACCAAAAATACACTAGGGAGAAAATCTATGGTTCTTACCGATTAATTCAACAACCAAATCAATAACAGAATTTCAAATTAAACAAATAAATCTGGGAACTTAAATTTAAAACAAGAAATTTAAATTCACTAAACCAGGGAGAAAATCTAGGATTCTTACCGATTAATTCAACAACCAAATCAATAACAGAATTTCAAATTAAACCAAAAATACACTATAAATCAGGGAGAAAATCTAGGATTCTTACGGATTAATTCAACAACCAAATCAATAACATAATTTCAAATTAAACAAATAAATCTGGTAACTTAAATTTAAAACAAGAAATTTAAGTTCAAATAAGAGAGAATAAATTTAAAACAAGAATTTTAAATTCAAATAAGAGAGAAAAAACAAGAGAACTCAAAATTTAACCACAGTATATTGGATTCAATCAAAAATCAAGAACAACTAATAACTTACATGTTGCAACTAGGATTAAATAAAAAATGAAGAACAACTTCATGTATCTAAAACATCAACTCAAGAATAAAATGCCAGTGATAACATTTGGTAGACATCATTAAGTGTTGCACCTAAAACATCATATCAAAAATAAAGTATAATCTGAAACAATTTCAAAAGTAATTCACGGATCCAATTTCAAAAAGAGAAAATAAAAAGGCTCACCAATCCCATTAATATCACTGTAAATGAGAAAATAAAAGCAATTGACCGAAAACTCTTCATATTCTCTCTTTGAAACCCTCATTTCAAAAAATCAAAAAAGAAAAGAGAAACCGTACCGTTCTTCGAAAGAAACCCTTTCAGCTTCTCGATTCTTCGTTCCTTCGGGAGAGACCAAAACTGATTCTTCTTCAACATTCATCGTTCCTTCTAGCAAACCCCATCATTCTTCTTCTTCGATCCTTCTTCTTCAACTGATTCTCCTTCAATCTTCGTCTCGAAACCAAAACCCTCAACCCGATTCTCAAACCCCTCGACAGATTTACACTGTATTTACACAGACATTCAAACCCCTTGACAGATTTACACTGTATTTACACAGACATTCGAGGGAACATTCAGAAGCTCGAAGAGGTTGTGTCGACATTCCAGGGTATGCATGTTTCGATTCTCTTCTAACTTTTTGGTTTATATAGATATAAACTATTTTTTCCTTACAAATAGGACAATTTGACCGAAGTTAGGACCCACCATTTTAATAAGAAAATGAAGAGAGAGAATTGATGTTGTAAATTCTGAAAAACCAAAGCCAAAAAATGTATATTTTGGGAAGACAAAGAGGATTGATTCTGTAACTATCATTCCTTGATTCATGGAATTGGAGGTTACAGATTTTCATTTTTTTTTTTAAATATCATCAGATAAGGCTGCACAAATATAGGAGAGACGTGGGGAATGACTCAAGGGTAAAAATGGAAGTTCCAATCCCACGAAAATAGGTTAGAAAACCGGTTTGGCCATTTTTCATTAAAAAAATCCAGTTTGGCCATTTTTCAGAAATACCCTGTAATTTTTGGCCATTTCTAAGGATATCCCAAATTTTTATTATTTGATTAAATGGTTCATTTGGCCTTAAAATTTTATAATTGGTCAACTTTGTCTTCAAATTAAATTTGGGACACATGTCAATTTATAATTGGTCCCAAATTTAATTATTTGTAATTTCACCATTAATTTTAGGTAATGACGTGGTAATTTGTGATTGGTCGAAATTCTCTCCAACAGTTTTCTTTTAATTTCTCACGACAAAAAAAAATTAAGTGAGAATGTTAGAACATGACTGGATTGTTGCCTTTTTTAATTTGTTTTAAAGTAAAAATATTTTTGCAATATTTCACATGTCAGGTATTTGTTGATTAAAATGTAGTTAAAGTAATTAGATATATGCATCTTCTTGATCGAGTCCGGTATTATTATTTAAATAAATAAACTATTAAAAGTCAAACTAAAAAAAATACTTGAAATATAAACGAACAATTGGAAGAAGTTCGAAAATACCTGAAATATAAACGAACAATTGGAAGAAATTGGAAGAGACAAGTAGTTTTACACCTGAAAACAAAAAGTTGGAGGGGAAAAAGAAATTAAAGTTAGTCATTCATAACATAAAATATTTGAGAATGACTTTCTTCTAATTAAATTGATAAAATAAAACAAAAACATTATAATTATAATTCAAGAGATGTACCTGAAACCAACAATGGAGCAGATGAATAGTTTTTTATGTGAAAACTAATGGGAGAAGGTGAACAATTTAGAGAGGGAATTTAGATTCGAATTCTAATTTGATTAGATTTTGGATATAGTGTATATAGATCATATGATAAAAAAAAAAAATACCTTATTTGTTTTTATTAAAAAAAATTTTAAAAAAAAACAAACCAATCAGTAAATTATTAAAATTTATATACGAATAGTGGGAACGGATCAATAAATACCCTATTTGTTAATCTTTTACTTTTTAATTAAAATAATTAGATTTAACTAAAATAATTATTTTAAGATTTTTTTTTCAAAATTTCATATTAAATTTCATATTGGTTTTTAAAATTTTTGATCCAATCGTTAAAGTCAATTGTTTTTTATCATTATGTTTGTTTTTTTCTTCTTTTTAATTAAAATAATTAGATTTAACTAAAATAATTATCTTAAGATTTTTTTTTCAAAATTTCATATTAAATTTCATATTGGATTTTAAAATTTTTTATCCAATAGTGAAAGTCAATTGTTTTTTATCATTATGTTTGTTTTTTTCTTATTTTTTCTTCTTTTTAATTAAAATAATTAGATTTAACTAAAACAATTATCTTAAGATTTTTTTTTCAAAATTTCATATTAAATTTCATATTGGTTTTAAAAATTTTTTATCCAATCGTAAAAGTCAATTGTTTTTTTTTTTATCATTATGTTTGTTTTTTTCTTATTTTTTCTTTTTTTTATAGGAAAAGATTTTTCTCAAAATTTCATATTCGTTTTTTAATTGTTTTACAGATTACCACTTTTTATTTTTTGTATATTTTTATTTTTTTAATTAAAATAATTAGATTTTAACTAAAGTAATTATCTTAAATTTAAAGGGGTATTTTAGTCTAAAAATGTTTTCCACGAATCCTTGCTTTTTAATATATATATTATAGATTATAGATAGGATGAACTTTTCTTGAAAAGATTTGGCATCATATTTAATTGGATTTGTTATGGGCAATTTTGGACCACCCGACGCATAAGGAGCTGACGAGGATGTCCGGGCGAAAATAGGGCTGGAAAACCGACCCAGAGGAGGAACCGACCAAAGGGCCGGGCCAGCTTGGCCCGACCCAAATGGTCGGCCTCGGCCTTAGGCCGAGGCCGAGCGTTATGGTCGGCCTCGGCCCAAGGCCGAGGCCGACCATTCGGCCCGCTTGCGCGGGCCGAGCTCGGTCACCTCCTCTCGGTCCCCAATGTCGCTAGCCGCCCCGGTTTCGCCTGGTTTGTCCCGAAACGCCTCCGAATTCCTAAAAACCCTAGGAGCATGAGCAGGTATTTATACCCCTCTTCGCCACTGAAGAAGGGGACCCGAACTCAATTCTCGACTCTCTTCCCTTGCTCACTAGCTCTCTCTTCCGTTTTCTGACTTAAGCATCGGAGGCGGTGTGGCTAGCACCACACCGGTGTGCAGGTTTTCTCTTTTGCAGGCCACGTCTTCCCCCTCATCTACAAATTTACCGTTGGTGGCACGTGAAGGTCAGGTGAGTTTCCTCTGACCAAAATCGACCATCAACAGTTGGCGCCGTCTGTGGGGAAGAAAGCTTGCCAAATCTGCATATCGGTCATTCCATGAGTAAGGGGATGGAGATGAGAAATCTAGACATAAACACAGGGAATTCGGATGGTGATCGCCACCGGCGGAGGTCACGGGAAGAAGGCCGAGATCGGCCTCGGACTGAATCTCCTCGTCCTCGGTCTCCACTGCCCTCATCCCGAGAGAAGCAAGCTGATCTCAAATTTGCTGCTCTCGAAAACAAAGTAAGTGCGATGGATCATAATTTGTCCAGGATACTTCGTATCTTGGATAAACCTGGTCCCAGCACTAAAACCCCTGACGAGAGGCTGGTTAGGGATCCAAGGAAGGGGAAGGAGCCAATCGAGTACACTGCAGAATCGGAGACGAGATCGAAGGGAAAGAAGACTAGCAGCATGACCAGCAAGGTCAGGGGGCTCAAACCTACTGATCGTACGATTTTGAGGAGCCCAGAGTCGAGCACACTTAAGGGGCATGACTACACAGTTTCTACCCCAAGCTATGGTCATGCTAAGACAGACCTGAGAAATCTGATCGAGGAGAAGCGCAGAAGTGCCAAAACTGCCGAATCTGAGGCCAGGGCTGCCGAAGCTGAAGCCAGGGCTGCCGAGGCCGAGGCCAGAGCAGCCGAGGCCGAGGCTAGGTTGGCCGAGGCCGAGGCCAAGAAGGACAATCCCCCCTGGAAGACTGAGCTTCTAAACACACTAAAAGAGCTTGGAAATCCACAGGGATACCTGCAGAAGTTAAAGAACTCAGGAGCACAAGACTTGGAAGAATTGATCGACCAAGTTGACCCGCCCTTCACAGAAGAAGTCATGAAAGCCGAGGTGCCACAGAAGTTCAAGGTACCTACATTCACACCGTACGATGGCAAGAAAGACCCTGTGCAGCATCTAAATGCCTACAAAAGCTGGATGGACTTCCACGGCGTCTCGGACGCAATCAGGTGCCGTGCCTTCTTTTTCACTTTGACAGGATCAGCCAAGCATTGGTTTGAAAGGCTGAAGAGAAGATCCATCGGCTCTTTCAAGGAGTTAGCCCGAGCATTCCTTGCACAGTTCATGGGAGCCAGAGAACAGCGCAAGCCCCACATCAACCTCTTAACAGTCAAACAGCAACTAGGTGAGAGCTTGCGCGATTACATAACGCGTTTTAACGACGAAGCGCTGCAGGTTGAGGGATACAGTGAGGGAGCAGCCCTAGTAGCCATCACAGCTGGTCTGGAAGACGAAAGACTGCTTAATTCAATAGGTAAGAGCCAACCTCGAACCTATGCAGAGTTCGTCTCCCGGGCACAGAAGTACATGAGCGCAGAAGAGTTGCTCAAATCAAAAAAGTTAGAACGTGAACACAAGAGGCCTTCTTCATCTGACCGCGACAGTAGGAAGGACAAGAAGCAGCGGACCGACGAGGGAGGCCGAGGCCGACCAGACTATAGCCGAGGCCGACCAGATCATGGCCGAGGCCGACTAGACCAAGGAGACTACCTGAAGAAGTTTGAGAGGTACACCCCTACTTCAATCCCACAGGAGCAAATTTTGATGGAGATAAGGAATACAAACCTGCTCAACGCGCCCAGGAAGCTGAAGTCCAATCCTGACAACAGAGACAAGAGCCAGTATTGCCTCTTTCATCGAGATCATGGACATTCAACCAGAAACTGCATTCAGCTAAAGGACGAGATTGAAGCGCTGATTCGGAACGGATACCTGAAGGAATTCACCACTAAGGCCGAGGCAGACCAGAGGTGGCCAAGGCCGACCAGAGATGACCCAGGCAAAGACAAGGGTGGACCTCAACTGGAAATTCGTTGA

mRNA sequence

ATGTGTGAGTGTGTTTCACTGGCTAGAACGCTTGTTCTCGAGTCTGAAGCTTCGATTGATTCTTGGAGTCTTGAAGTCTTTGAACATTCGAGGGAACATTCAGAAGCTCGAAGAGGTTGTGTCGACATTCCAGGGGCTGGAAAACCGACCCAGAGGAGGAACCGACCAAAGGGCCGGGCCAGCTTGGCCCGACCCAAATGGTCGGCCTCGGCCTTAGGCCGAGGCCGAGCGTTATGGTCGGCCTCGGCCCAAGGCCGAGGCCGACCATTCGGCCCGCTTGCGCGGGCCGAGCTCGGTCACCTCCTCTCGGTCCCCAATGTCGCTAGCCGCCCCGGTTTCGCCTGGTTTGTCCCGAAACGCCTCCGAATTCCTAAAAACCCTAGGAGCATGAGCAGCATCGGAGGCGGTGTGGCTAGCACCACACCGGTGTGCAGGTTTTCTCTTTTGCAGGCCACGTCTTCCCCCTCATCTACAAATTTACCGTTGGTGGCACGTGAAGGTCAGGGGATGGAGATGAGAAATCTAGACATAAACACAGGGAATTCGGATGGTGATCGCCACCGGCGGAGGTCACGGGAAGAAGGCCGAGATCGGCCTCGGACTGAATCTCCTCGTCCTCGGTCTCCACTGCCCTCATCCCGAGAGAAGCAAGCTGATCTCAAATTTGCTGCTCTCGAAAACAAAGTAAGTGCGATGGATCATAATTTGTCCAGGATACTTCGTATCTTGGATAAACCTGGTCCCAGCACTAAAACCCCTGACGAGAGGCTGGTTAGGGATCCAAGGAAGGGGAAGGAGCCAATCGAGTACACTGCAGAATCGGAGACGAGATCGAAGGGAAAGAAGACTAGCAGCATGACCAGCAAGGTCAGGGGGCTCAAACCTACTGATCGTACGATTTTGAGGAGCCCAGAGTCGAGCACACTTAAGGGGCATGACTACACAGTTTCTACCCCAAGCTATGGTCATGCTAAGACAGACCTGAGAAATCTGATCGAGGAGAAGCGCAGAAGTGCCAAAACTGCCGAATCTGAGGCCAGGGCTGCCGAAGCTGAAGCCAGGGCTGCCGAGGCCGAGGCCAGAGCAGCCGAGGCCGAGGCTAGGTTGGCCGAGGCCGAGGCCAAGAAGGACAATCCCCCCTGGAAGACTGAGCTTCTAAACACACTAAAAGAGCTTGGAAATCCACAGGGATACCTGCAGAAGTTAAAGAACTCAGGAGCACAAGACTTGGAAGAATTGATCGACCAAGTTGACCCGCCCTTCACAGAAGAAAAGTACATGAGCGCAGAAGAGTTGCTCAAATCAAAAAAGTTAGAACGTGAACACAAGAGGCCTTCTTCATCTGACCGCGACAGTAGGAAGGACAAGAAGCAGCGGACCGACGAGGGAGGCCGAGGCCGACCAGACTATAGCCGAGGCCGACCAGATCATGGCCGAGGCCGACTAGACCAAGGAGACTACCTGAAGAAGTTTGAGAGGTACACCCCTACTTCAATCCCACAGGAGCAAATTTTGATGGAGATAAGGAATACAAACCTGCTCAACGCGCCCAGGAAGCTGAAGTCCAATCCTGACAACAGAGACAAGAGCCAGTATTGCCTCTTTCATCGAGATCATGGACATTCAACCAGAAACTGCATTCAGCTAAAGGACGAGATTGAAGCGCTGATTCGGAACGGATACCTGAAGGAATTCACCACTAAGGCCGAGGCAGACCAGAGGTGGCCAAGGCCGACCAGAGATGACCCAGGCAAAGACAAGGGTGGACCTCAACTGGAAATTCGTTGA

Coding sequence (CDS)

ATGTGTGAGTGTGTTTCACTGGCTAGAACGCTTGTTCTCGAGTCTGAAGCTTCGATTGATTCTTGGAGTCTTGAAGTCTTTGAACATTCGAGGGAACATTCAGAAGCTCGAAGAGGTTGTGTCGACATTCCAGGGGCTGGAAAACCGACCCAGAGGAGGAACCGACCAAAGGGCCGGGCCAGCTTGGCCCGACCCAAATGGTCGGCCTCGGCCTTAGGCCGAGGCCGAGCGTTATGGTCGGCCTCGGCCCAAGGCCGAGGCCGACCATTCGGCCCGCTTGCGCGGGCCGAGCTCGGTCACCTCCTCTCGGTCCCCAATGTCGCTAGCCGCCCCGGTTTCGCCTGGTTTGTCCCGAAACGCCTCCGAATTCCTAAAAACCCTAGGAGCATGAGCAGCATCGGAGGCGGTGTGGCTAGCACCACACCGGTGTGCAGGTTTTCTCTTTTGCAGGCCACGTCTTCCCCCTCATCTACAAATTTACCGTTGGTGGCACGTGAAGGTCAGGGGATGGAGATGAGAAATCTAGACATAAACACAGGGAATTCGGATGGTGATCGCCACCGGCGGAGGTCACGGGAAGAAGGCCGAGATCGGCCTCGGACTGAATCTCCTCGTCCTCGGTCTCCACTGCCCTCATCCCGAGAGAAGCAAGCTGATCTCAAATTTGCTGCTCTCGAAAACAAAGTAAGTGCGATGGATCATAATTTGTCCAGGATACTTCGTATCTTGGATAAACCTGGTCCCAGCACTAAAACCCCTGACGAGAGGCTGGTTAGGGATCCAAGGAAGGGGAAGGAGCCAATCGAGTACACTGCAGAATCGGAGACGAGATCGAAGGGAAAGAAGACTAGCAGCATGACCAGCAAGGTCAGGGGGCTCAAACCTACTGATCGTACGATTTTGAGGAGCCCAGAGTCGAGCACACTTAAGGGGCATGACTACACAGTTTCTACCCCAAGCTATGGTCATGCTAAGACAGACCTGAGAAATCTGATCGAGGAGAAGCGCAGAAGTGCCAAAACTGCCGAATCTGAGGCCAGGGCTGCCGAAGCTGAAGCCAGGGCTGCCGAGGCCGAGGCCAGAGCAGCCGAGGCCGAGGCTAGGTTGGCCGAGGCCGAGGCCAAGAAGGACAATCCCCCCTGGAAGACTGAGCTTCTAAACACACTAAAAGAGCTTGGAAATCCACAGGGATACCTGCAGAAGTTAAAGAACTCAGGAGCACAAGACTTGGAAGAATTGATCGACCAAGTTGACCCGCCCTTCACAGAAGAAAAGTACATGAGCGCAGAAGAGTTGCTCAAATCAAAAAAGTTAGAACGTGAACACAAGAGGCCTTCTTCATCTGACCGCGACAGTAGGAAGGACAAGAAGCAGCGGACCGACGAGGGAGGCCGAGGCCGACCAGACTATAGCCGAGGCCGACCAGATCATGGCCGAGGCCGACTAGACCAAGGAGACTACCTGAAGAAGTTTGAGAGGTACACCCCTACTTCAATCCCACAGGAGCAAATTTTGATGGAGATAAGGAATACAAACCTGCTCAACGCGCCCAGGAAGCTGAAGTCCAATCCTGACAACAGAGACAAGAGCCAGTATTGCCTCTTTCATCGAGATCATGGACATTCAACCAGAAACTGCATTCAGCTAAAGGACGAGATTGAAGCGCTGATTCGGAACGGATACCTGAAGGAATTCACCACTAAGGCCGAGGCAGACCAGAGGTGGCCAAGGCCGACCAGAGATGACCCAGGCAAAGACAAGGGTGGACCTCAACTGGAAATTCGTTGA

Protein sequence

MCECVSLARTLVLESEASIDSWSLEVFEHSREHSEARRGCVDIPGAGKPTQRRNRPKGRASLARPKWSASALGRGRALWSASAQGRGRPFGPLARAELGHLLSVPNVASRPGFAWFVPKRLRIPKNPRSMSSIGGGVASTTPVCRFSLLQATSSPSSTNLPLVAREGQGMEMRNLDINTGNSDGDRHRRRSREEGRDRPRTESPRPRSPLPSSREKQADLKFAALENKVSAMDHNLSRILRILDKPGPSTKTPDERLVRDPRKGKEPIEYTAESETRSKGKKTSSMTSKVRGLKPTDRTILRSPESSTLKGHDYTVSTPSYGHAKTDLRNLIEEKRRSAKTAESEARAAEAEARAAEAEARAAEAEARLAEAEAKKDNPPWKTELLNTLKELGNPQGYLQKLKNSGAQDLEELIDQVDPPFTEEKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQRTDEGGRGRPDYSRGRPDHGRGRLDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR
Homology
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BLAST of Spg008578 vs. NCBI nr
Match: XP_022159192.1 (uncharacterized protein LOC111025612 [Momordica charantia])

HSP 1 Score: 112.1 bits (279), Expect = 1.7e-20
Identity = 68/178 (38.20%), Postives = 98/178 (55.06%), Query Frame = 0 

Query: 424 EKYMSAEEL------LKSKKLEREHKRPSSSDRDSRKDKKQRTDEGGRGRPDYSRGRPDH 483
           +KYMSAEE       L+ K+ +++ +R       S+ +K+ R                  
Sbjct: 29  QKYMSAEEFFHLKKELEGKRADQKRERSGEKPLSSKWEKQDRV----------------- 88

Query: 484 GRGRLDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHR 543
               + Q D  +KFE+YTPT++P EQ+LMEI++  LL  P  +K+ P+ R K +YCLFHR
Sbjct: 89  ----VGQKDLPRKFEKYTPTTVPLEQVLMEIKDQRLLKWPETMKAPPNKRSKGRYCLFHR 148

Query: 544 DHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR 596
           DHGH+T +C  LK+E+E LIR GYLKE+    +A      P R++   D   P  EIR
Sbjct: 149 DHGHATLDCFDLKEEVEGLIRKGYLKEYVDDLKA-----TPNREN---DNKSPTREIR 177

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BLAST of Spg008578 vs. NCBI nr
Match: XP_022158830.1 (uncharacterized protein LOC111025293 [Momordica charantia])

HSP 1 Score: 111.3 bits (277), Expect = 2.9e-20
Identity = 66/172 (38.37%), Postives = 95/172 (55.23%), Query Frame = 0 

Query: 424 EKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQRTDEGGRGRPDYSRGRPDHGRGRLD 483
           ++YMSA E   SK      + P     D ++++     +G R             R R  
Sbjct: 345 QRYMSAGEFFYSK------REPDGKRTDPKRERSGDKPQGSRWEK----------RDRSS 404

Query: 484 QGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHST 543
           Q D  +KFE+YTPT++P EQ+LMEI++  LL  P ++K++   R K +YCLFHRDHGH+T
Sbjct: 405 QKDPPRKFEKYTPTTVPIEQVLMEIKDQRLLKWPERMKASSAKRSKGRYCLFHRDHGHAT 464

Query: 544 RNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR 596
           ++C  LK+E+E LIR GYLKE+  + +A Q          G+    P  EIR
Sbjct: 465 QDCFDLKEEVEGLIRRGYLKEYVEEPKATQN---------GESDKSPAREIR 491

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BLAST of Spg008578 vs. NCBI nr
Match: XP_022159368.1 (uncharacterized protein LOC111025785 [Momordica charantia])

HSP 1 Score: 104.0 bits (258), Expect = 4.6e-18
Identity = 65/172 (37.79%), Postives = 92/172 (53.49%), Query Frame = 0 

Query: 424 EKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQRTDEGGRGRPDYSRGRPDHGRGRLD 483
           ++YMSA E   SK                R+   +RTD+      D  +G     R R  
Sbjct: 129 QRYMSAGEFFYSK----------------REPDGKRTDQKRERSGDKPQGSRWEKRDRSS 188

Query: 484 QGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHST 543
           Q D  +KFE+YTPT++P EQ+LMEI++  LL  P ++K     R K +YCLFHRDH H+T
Sbjct: 189 QKDPPRKFEKYTPTTVPLEQVLMEIKDQRLLKWPERMKVPSTKRSKGRYCLFHRDHNHAT 248

Query: 544 RNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR 596
           ++   LK+E+E LIR GYL+E+  + +A Q          G+ +  P  EIR
Sbjct: 249 QDYFDLKEEVEGLIRRGYLQEYVEEPKATQN---------GESEKSPAREIR 275

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BLAST of Spg008578 vs. NCBI nr
Match: XP_022142767.1 (uncharacterized protein LOC111012805 [Momordica charantia])

HSP 1 Score: 104.0 bits (258), Expect = 4.6e-18
Identity = 65/172 (37.79%), Postives = 91/172 (52.91%), Query Frame = 0 

Query: 424 EKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQRTDEGGRGRPDYSRGRPDHGRGRLD 483
           ++YMSA E   SK                R+   +RTD+      D  +G     R R  
Sbjct: 170 QRYMSAGEFFYSK----------------RESNGKRTDQKRERSGDKPQGSRWEKRDRSC 229

Query: 484 QGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHST 543
           Q D  +KFE+YT T++P EQ+LMEI+N  LL  P ++ ++   R K +YCLFH DHGH+T
Sbjct: 230 QKDPPQKFEKYTSTTVPLEQVLMEIKNQRLLKWPERMNASSTKRSKGRYCLFHWDHGHAT 289

Query: 544 RNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR 596
           ++C  LK+E+E LI  GYLKE+  + +A Q          G+    P  EIR
Sbjct: 290 QDCFDLKEEVEGLILRGYLKEYVEEPKATQN---------GESDKSPAREIR 316

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BLAST of Spg008578 vs. NCBI nr
Match: XP_030948866.1 (uncharacterized protein LOC115972746 [Quercus lobata])

HSP 1 Score: 100.5 bits (249), Expect = 5.1e-17
Identity = 66/166 (39.76%), Postives = 89/166 (53.61%), Query Frame = 0 

Query: 418 DPPFTEEKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQRTDEGGRGRPDYSRGRPDH 477
           D  +   KYM+AE+ L    L  E K      +D+R+D+ ++    G  R D  R RP  
Sbjct: 245 DVLYRATKYMNAEDAL----LACEEKPKKRERQDTRQDRGRKVARTGDQR-DEKRSRPPT 304

Query: 478 GRGRLDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHR 537
           GR           F  +TP + P +Q+LM+I+N   L  P KLK NP+ R + +YC FHR
Sbjct: 305 GR-----------FTNFTPLTAPIDQVLMQIKNEGALTFPGKLKGNPNKRPRDKYCRFHR 364

Query: 538 DHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEAD-QRWPRPTRDD 583
           DHGH T NC  LK +IEALIR G L+ F +K   D    P P R++
Sbjct: 365 DHGHDTANCYDLKQQIEALIRQGKLQRFASKERIDTPEEPAPRREN 394

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BLAST of Spg008578 vs. ExPASy TrEMBL
Match: A0A6J1DZ52 (uncharacterized protein LOC111025612 OS=Momordica charantia OX=3673 GN=LOC111025612 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 8.2e-21
Identity = 68/178 (38.20%), Postives = 98/178 (55.06%), Query Frame = 0 

Query: 424 EKYMSAEEL------LKSKKLEREHKRPSSSDRDSRKDKKQRTDEGGRGRPDYSRGRPDH 483
           +KYMSAEE       L+ K+ +++ +R       S+ +K+ R                  
Sbjct: 29  QKYMSAEEFFHLKKELEGKRADQKRERSGEKPLSSKWEKQDRV----------------- 88

Query: 484 GRGRLDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHR 543
               + Q D  +KFE+YTPT++P EQ+LMEI++  LL  P  +K+ P+ R K +YCLFHR
Sbjct: 89  ----VGQKDLPRKFEKYTPTTVPLEQVLMEIKDQRLLKWPETMKAPPNKRSKGRYCLFHR 148

Query: 544 DHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR 596
           DHGH+T +C  LK+E+E LIR GYLKE+    +A      P R++   D   P  EIR
Sbjct: 149 DHGHATLDCFDLKEEVEGLIRKGYLKEYVDDLKA-----TPNREN---DNKSPTREIR 177

[Close]
BLAST of Spg008578 vs. ExPASy TrEMBL
Match: A0A6J1DWY0 (uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025293 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.4e-20
Identity = 66/172 (38.37%), Postives = 95/172 (55.23%), Query Frame = 0 

Query: 424 EKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQRTDEGGRGRPDYSRGRPDHGRGRLD 483
           ++YMSA E   SK      + P     D ++++     +G R             R R  
Sbjct: 345 QRYMSAGEFFYSK------REPDGKRTDPKRERSGDKPQGSRWEK----------RDRSS 404

Query: 484 QGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHST 543
           Q D  +KFE+YTPT++P EQ+LMEI++  LL  P ++K++   R K +YCLFHRDHGH+T
Sbjct: 405 QKDPPRKFEKYTPTTVPIEQVLMEIKDQRLLKWPERMKASSAKRSKGRYCLFHRDHGHAT 464

Query: 544 RNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR 596
           ++C  LK+E+E LIR GYLKE+  + +A Q          G+    P  EIR
Sbjct: 465 QDCFDLKEEVEGLIRRGYLKEYVEEPKATQN---------GESDKSPAREIR 491

[Close]
BLAST of Spg008578 vs. ExPASy TrEMBL
Match: A0A6J1DYL6 (uncharacterized protein LOC111025785 OS=Momordica charantia OX=3673 GN=LOC111025785 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.2e-18
Identity = 65/172 (37.79%), Postives = 92/172 (53.49%), Query Frame = 0 

Query: 424 EKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQRTDEGGRGRPDYSRGRPDHGRGRLD 483
           ++YMSA E   SK                R+   +RTD+      D  +G     R R  
Sbjct: 129 QRYMSAGEFFYSK----------------REPDGKRTDQKRERSGDKPQGSRWEKRDRSS 188

Query: 484 QGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHST 543
           Q D  +KFE+YTPT++P EQ+LMEI++  LL  P ++K     R K +YCLFHRDH H+T
Sbjct: 189 QKDPPRKFEKYTPTTVPLEQVLMEIKDQRLLKWPERMKVPSTKRSKGRYCLFHRDHNHAT 248

Query: 544 RNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR 596
           ++   LK+E+E LIR GYL+E+  + +A Q          G+ +  P  EIR
Sbjct: 249 QDYFDLKEEVEGLIRRGYLQEYVEEPKATQN---------GESEKSPAREIR 275

[Close]
BLAST of Spg008578 vs. ExPASy TrEMBL
Match: A0A6J1CNT2 (uncharacterized protein LOC111012805 OS=Momordica charantia OX=3673 GN=LOC111012805 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.2e-18
Identity = 65/172 (37.79%), Postives = 91/172 (52.91%), Query Frame = 0 

Query: 424 EKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQRTDEGGRGRPDYSRGRPDHGRGRLD 483
           ++YMSA E   SK                R+   +RTD+      D  +G     R R  
Sbjct: 170 QRYMSAGEFFYSK----------------RESNGKRTDQKRERSGDKPQGSRWEKRDRSC 229

Query: 484 QGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHST 543
           Q D  +KFE+YT T++P EQ+LMEI+N  LL  P ++ ++   R K +YCLFH DHGH+T
Sbjct: 230 QKDPPQKFEKYTSTTVPLEQVLMEIKNQRLLKWPERMNASSTKRSKGRYCLFHWDHGHAT 289

Query: 544 RNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR 596
           ++C  LK+E+E LI  GYLKE+  + +A Q          G+    P  EIR
Sbjct: 290 QDCFDLKEEVEGLILRGYLKEYVEEPKATQN---------GESDKSPAREIR 316

[Close]
BLAST of Spg008578 vs. ExPASy TrEMBL
Match: A0A7N2N013 (Ribonuclease H OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 9.3e-17
Identity = 63/151 (41.72%), Postives = 86/151 (56.95%), Query Frame = 0 

Query: 425 KYMSAEELLKSKKLEREHKRPSSSDR--DSRKDKKQRTDEGGRGRPDYSRGRPDHGRGRL 484
           KYM+AE+ L S++      RP   DR  DSR+D+ ++    G  R D  R +P  GR   
Sbjct: 304 KYMNAEDALLSRE-----DRPKKRDRPEDSRQDQGRKKGRMGDRRED-RRPKPMSGR--- 363

Query: 485 DQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHS 544
                   F  +TP + P +Q+LM+I++   L  P KLKS+P  R + +YC FHRDHGH 
Sbjct: 364 --------FANFTPLNAPIDQVLMQIKDEGSLTFPGKLKSDPSKRSRDKYCRFHRDHGHD 423

Query: 545 TRNCIQLKDEIEALIRNGYLKEFTTKAEADQ 574
           T +C  LK +IEALIR G L++F  K   DQ
Sbjct: 424 TADCYDLKQQIEALIRQGKLQKFVNKGRTDQ 437

The following BLAST results are available for this feature:
BLAST of Spg008578 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022159192.11.7e-2038.20uncharacterized protein LOC111025612 [Momordica charantia][more]
XP_022158830.12.9e-2038.37uncharacterized protein LOC111025293 [Momordica charantia][more]
XP_022159368.14.6e-1837.79uncharacterized protein LOC111025785 [Momordica charantia][more]
XP_022142767.14.6e-1837.79uncharacterized protein LOC111012805 [Momordica charantia][more]
XP_030948866.15.1e-1739.76uncharacterized protein LOC115972746 [Quercus lobata][more]
BLAST of Spg008578 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg008578 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DZ528.2e-2138.20uncharacterized protein LOC111025612 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1DWY01.4e-2038.37uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1DYL62.2e-1837.79uncharacterized protein LOC111025785 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1CNT22.2e-1837.79uncharacterized protein LOC111012805 OS=Momordica charantia OX=3673 GN=LOC111012... [more]
A0A7N2N0139.3e-1741.72Ribonuclease H OS=Quercus lobata OX=97700 PE=4 SV=1[more]
BLAST of Spg008578 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 325..375
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..66
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 248..282
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 180..204
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 166..216
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 241..382
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 399..489
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 327..380
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 424..489
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 300..324
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 567..595

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg008578.1Spg008578.1mRNA