Spg008568 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg008568
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	RNA-binding protein 2-like
Location	scaffold10: 36180165 .. 36188662 (+)
RNA-Seq Expression	Spg008568
Synteny	Spg008568

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCATGAACTAAATTGTTACTTTCATACAAGTTTAGGGACAAAAATGATTTTTAACTAAAAAAAAATCCATAAACTTACTACATCGAGTAACTGGATAGGATAAGGCAGTTACTTATCTGGTAATTCGAAATTCGAACCAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAAAAAATAGAATTTCGATGTGGGATTAGATAATTGATTCTCGCGTAATATCTACGGTGAGGTCTCGCGTATTGGATCCTAATGTGTCTGAGGAGCTTCCTCTGCTTCGAAAACATTTCCACCGTTTTACTCCGAAACATCAGACAGCTCTAAATTAATCAATCAATCGTCTGTTAGGGTTTTAGCAATCTCTAAATTCTGCGTGAAGCTCGATTCATTTGTCTCCGCTTTCCAAGATCGCGTCTTCCCTCTGTCTTCTGCCTCTCTCTGAAGCTCTAATTGAGGAAAAACTGCAGCTTATATGGCGGATGATTATTGGAATCGGCAGCAGCCTCTGCTTCCCTCGCCTGGCTTGCTTAAACGACCTCGTACTGAATATGGTAGGTTCGTGTAGTTTTTTTTATGTTTAATTTGTTTCTGCTTGAAACCTCTTTCTGAAATTCGGTCTCTTTTATTGAATTCGAATGCACTTTTGGTTGCGTATGATGATTTTGCAGCTAGTTTGATAGTGATTTTTGATGGGCTTAATGGTAGAAAACTAATCAAAACGTTATTTTATTATTTGTTTTGATTTGCTAAGTTTTTGGGGGTGTTAGGTAACTTTTCGACCCAAGAGGAAATAGTACTCCAGATTGATGTGTTTCAGGGGTATTAAAAAAAATTGATGGCCCAATGCAATTCATCTGATAGTTGAGAGAAGGCAATTCTCCTCTTTTGTTTCTAGTAGTGAATGTGCAAGCCAAGTTCTCCAGTAGAAACTAGAAAGGGCCAAATCAAAGGTTTAAATGGCCATGTCATGAACTGAAATTTGGTGATGATGCCCTCATTTTCACCTGCTATGGAAGTCAGTTTGGAAATTTACTTCATATTTTAGAACTTTTTGAGAATGCTTTGAAGCTGAAAATAAACTTTATAAACCAATCGTACAACTTTCATGATCCCAGGGAAGAAACCATCGCAATGAATCTTAATAGTGCAAAGCATAGCTGGTCGTTATCCTATATTTGGATTGTAACACCCGAGTTAGGAGGGGTACATGAATGAACTGAGGCCACATCCGAATGAGAGGGATCCTGAGGACATGAAAGTATGGTCAAGATAAGCTTAAAAGAATTGATAGATACTACCTATACCAACAAGGTGCACCTTCCTTTTCGGTGGCTCAATCATAGGAACTTTGAAATTAAGCGTGCTTGGCTTGGAGAAGTTTTATGTTGGGTGACCTCTTTGGAATTTTCCTAGGAAGCATGTGAGTGAGGACAAAGCATGCTAAAAAGGACCCCGTGTTGGTTTGTGGGGACAGTCTTCAATCTTAGAAGCAATTTAAGACAAGTATGGTGACGTGACCAGGTCGTAGGGGAATGCCGGGGCCGTTAGGTGCCGAATTCGGATTCTGAATCCCGAGCCTGGGGCGTTACAAATGCTAGTCCATTATGGGGAAATCTAGTTTTCAATTTTTTGGTCCCCAGTATTGGAGAAAATTCATAACACGCTGCTTAGTAAATAGAATATTGCTCTATGTTGGCATTCTGGTAGAATTTGCTTCACTTCCTATAATTCAAGAGAAGGCTTTCCAATTATCTCTCAAATTGGAGGTTTTTGAAGTAGTCAAGTGGGAGGAAAAAAAGAGAAAGAAGAAAACTATTGTTTGCTAACATAATGGCATAAAGTTTAAAATATATTAAAAATTTTGAATTAAAACATCTCAGTAGTCAGAGGAAAAGAAAGCACAGAACATTGCTGCAGTAGTGGCAAGTGAAATAGGAGCAACCTAAATTGTGAAAATAAGGTTGTGGAAGAGCTATGCAAGTGGCGTATTGTTAGGTGAATTGGTGAAGTGTGCAACCTAGATAGTCAGAGTCTAGTAAGGTACTAGCATGACGAGCCAACAATGGAAGTTCGAATCTCTCTCAAATCCATTCTATATTCTATCATCTATGGTGAGTGGAGCATGTCTTTTTTTTTTTTTTTGAGAAGAGAAATAAATTTTATTGATGATTGAAATGAGGAGAAAATCTCCAAACACCTAAGGGTGAATTACAAGAAAACCTTCCAGTTCGAAATAAAAAAAGGACAAACTATAATTGGAGAACGGGTGTTTACATTTACACCAATATAAAGCATGAAAAAGAATTAAATCGATGAATTTATCAAAAGAAGAGAAACAATCCCTGAAAATTCTGTCATTCCTTTCGCCCCATAAATACAATACCAAAGAAAGACCCTGTTGAAAGTGGTGAGTGAAGCATGTCTTGCAAGTCAAGAAAGGGGTCTGGTCAAAATGTTGGGGCCAACAATATCTTTGTGTGCACCAATGCACTTAGGAAACTTGTTTGATGTCAGGATCAATCTTTCAACTTAATTAGTGATTTGCACTAGGAAGCAAAGTGGTTATAGTTTTTTGTACTTTGTATACAAAAGAGGTCAAAAGATTGAAGGTCCTTGTAAGCGCCACTGTAATGGTGCCAAAGTGAGGTCTTTCGGATGAAAACCCTAAACCAACACAGATTATTTTGTGCTGGAAGCCCTGGTAGTAAGTAGAAAATAAAAAGTAGACCCAAGGTAAATTTTATTCAACACATTCTTTCTAATACACCTACCCGTTTTAAGTCCCTCCCAAGCGTTCCACAGTGGTAGTTGAATAGTGCTTTAGGAATTCCTTGTAGGAAGATGGAACTTCAGTTAACGGAAGTCATATTGTTAATTAGGGGCAAATTGTTTCAAGTTTTTCACACGTTCTTTGCCTAGTGAGTACGTGTGCTTGGAGCAGAAATAAAAAGAAAAAAAAAGAATGGGTGCTTGGAGCTGAGAGCTAGAGATAGAAAAATCAATGCAATGGCAATTGCATGACATCATCCTTAAAAAATGATAAGAAAATTTAGTTTCATATATTGGGTAAAATTAATATTTCCGTATTAATGTATGCCAATCGGTCTTCACGAGGATGGGGCTATTGATCTCCTACCATAAAAATGTTTAGATACTTCCATAAAATTTGTTTGGGCATGACCCACATTTGTTTTGTAATTCTGACATCCTGCTACTATTTTGAAGCCTTTATGAAGGAAATTTTCGCTTGATCTCCTAAAGTAGAAGCTGATTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTTTTTTTTTTTTGAGATTGAAAGAATTTTTCACTTGATTTACAATTGGTTTTTTTTAAGCCTTTAGTTTTGCTTTTATAGAGGTTTCCCGTCCATTGAACTTAAAGTAATGTTATATAGAATTTGGCTTGGGAAAGAGATTAGAAGTGTGGAATATGTGCATGACTGAACTACTAAAACGGTTAATTTAAATAGTAAGATGGAATAACTATACTCATTGGACTTTATTGATTTAATTGAATATTCCTGAAGTACTATTGTGGACCTATTTTCTTTGACATATCTTTTATTCCTTTGCTATAGGGGCATCTGTTGATTAATGTTTTTAATAAGCTCTAGCAGTTTTCCTTCATTTTATATTGGAAATGGAATTATGCCCTGCTTTCTTTGCCTGCAGAACTTCCATCCTCTGGGTTTCCTACTGGCCATGAAATGCACAGTTATTTAGCAAGTGACGATCATGGTGGTCCTCGGGCTGTAAAAGATACACAAACAATTGGATCAGCATACGATCGTTATCTCCAAAGTGTGGTATGACTGAAATCTACATTTATTTTCTCTTCTTGCCTTGTAGTTTGAGTGCTGAAAACTTTTCACAATTGCTTCTGAAGCAACTTTCTTCTTTTACTTCCGGAGAAGTACCTACCCATGGGGAAATGGGGATGGGAAGGCCTGTTGCAAACAGAATGCCAATTGGGAGTAGAATGCCTGGGCCTTCAATACCTGATCCTGTTGTAATGAGTCGCCCTCCTGCAGTTTCTCCTGATCTTGCACCAAATGGTCGAAATATTGAGTATGGTAATCATCTTCCTATAGATTCAATGAACAGACCCGGACGTGAAACTGTGCCTCTTCCTCCTGATGCCTCCAACACTTTATATGTTGAAGGACTTCCTCCAGATAGTTCCAGGAGAGAAGTAGCTCGTATCCTTTTTCTCAGTGGTGATGCCACTGCAAATTTATATTGATTTTTCTCTCCCTTTTCAATTATTTACTTAAAGAGCTTCATTCCTTTACTTCAATGAAGATATTTTCCGCCCCTTTGTGGGATATAAAGAATTGAGACTTGTGAGCAAAGAATCTAAACATGTAATAGACCATTTTTTTGTTGTTTTTTGATTTCTCTTTTTAACTCCTCTGCGGGCACTAACCTTTACTTGGTTTTTCATGTTACATTTGTTTCAAAATATAGCGTGGTGGGGACCCTCTTATATTATGTTTTGTGGATTTTGCGAATCCAGCCTGTGCAGCAACTGCCATGAGTGCATTGCAAGGTGAATTATACTCACATTTCTTCCACATGGTCTTTTGCAGTTCTTGTAGAAGCAATATTTTTCCCTTGTCACCTCTTTTTACTCCAGATAGAAAAGATTGGGATTGAATCAATTATAGAATATCATTTTCTTTAGAAAAGCTCTCATCATCTTTATACTATTATTTAACTTATATATGCATGTATATTCTGTTTTCTGGTTATTGGGTGGGTACGAGTCTTCTGATTCATGTTGAGGAAGGACAACTTAGGAGTTTTGGTTGTAGTCAGAAAACTTCTTTGGTTTGTGTCTAGGTCCTAAGATTATAGGATTTCAAGACGAGTGTTCTTGGTTTGGGGGGGGGGGGGGGGGGGGGGGTCGGCATATTATTACTTTGATCAAGGAGGGCGTATCTTTGGTGGACATCCTATAGAGTGATGGTCCATTTGCTTGATCTAACTTGATACAGAAGGTTCTTGGCGCTTCCATTGAATGTTTTTTCTTTTTCAGCAAGCAAGTTAACAATGGTAGAGTTAGAAGACATGAAAAGCCCGCCTCTACCCCTGTGATTTTTAACGGCTGGAGATATTTAAGAGTGTGGCTGTTTCATTCCAAATTTATCCTCATTAGATTTCTAGCAAACTTCAAATGATTTCGGGGGTTTCCTGGTCATGACTTTATTTATTTATTTAATTTTGATAGGAAACAAAGACCCGGATCAGCTGTGTTTATTGCCCCATGACTAAGCTACCAAAGAAGAATTTTTATTTTCTTGGGATAGGAATCTGTCCAAATCACCTTATAGAGGCCATTCATATGTGTATGATTGTATTCTCCCAGATCTTCCATAAGGGATTTAACTGTAAAAGTATTGGATGGATCTAAGGGCCTATGATGAAAGGGATTACAAAAGGGCCTTATCGATAATTATTTAAAAAAAAACACCTCCACTGATTAACAAGGGTATTAAGACTGTAATTACAAAAAGGGAGGGACAATTTGCTCCAAGAAACAGCTAAAAGGGAAGTAGATTCCATAAAGTAGCCTATGACTTTTTCCTTATACAAAAAGATGCGACCATTACGCTCCAACCATAGGTTCCAGAAGAATGCACGAACATAACAAAGTCAGAGGATCTTTTTGTCATTTTTAAAAGGATGACCCAACAGTAAAAGAGATAAGAGGGAAAGAATATCACATGGTCTAGGGAAAGTCCATTTGAATGTCGTTTGCAAGAAGTTCCAAAACTTAGAGCAAATAGATGACTTTATGCTGAAGGAGTTTAATAGCAAATCCAAGGATCAGAATGAGGAGAATTTTGGCAACTTGGATGCTTTGAGGTTTTTATCTTTCTTTCTTTTTTTTTTTTTTTTTGATAGAAATGATAACCACTCCATTCCACAAAAAACAACTACACACCCTTACAGGCAAGGGACTAGAGTCCCTCCCCAACCGGAGAGGAGTTACAAGAAAGTCTTCCAATCTAAGTTAATGGTGTTAGTGGTGTAATTACAAAAGAGGTTGTGAGGTAAGTGGTGTAATTACAAAAGAGGTTGTGAAGGCTACTCCAATTGGAGGCTGTAAACTCTACAAGATCACAAAAGAGTCCAAAAGAATTAAACTTATAAAAAAAATTATAGCATTTCTTTTATAAGGAGGAGAAATTGGTAATCATAAGAATATAGATCTTCCTCTCGACATGTGGTGTTCAAGGTTTTTTCAGGAGGCAATTTGGCTTGTCTCTTGGGGTGTGGCATTAGGATGGCTATAGCTGGTCAAATAAGGGATTGGTTTTGTATTACGGGATGATAAGAGATGCAGATTCTCTTTCTAAAGGAAGACCATAGAGTTTGGATGAAGGAAAGTTCAAGTTCTTATTCTCGAAACTCATTTTGGTAAGATCTGTACACGGAGAACTTTATTTTCAGTGCAAAAAGAGTTCACTGGAGCTGTTTGATGTACCTTTGTCCAGAGAAGGTTAAAATTTGTCTGGACTCCTTTTTTGGGAGGGTTGCATGCTCAAGACAAGATTGCCACCCTTTCAGTTGAGGACTTGATAGATTACCTCTTTTTTTGGGGCTCCTTTCGCAATGGAGCATTCGGAGATTTCTTTTTCACAATTTTCATTATCTATAGACTCCGCCTTTCCCTTGACAAACGAAAAACCTTTTTTCTTCCTTTCATGGCCATTCATTTACTTTATTTTTATTATTTTTTTTATTTTTATGAATAACCGAGCTTTCATTGGAAAAAAATAAAAGAATACAAGGGCATCCAAAAAACCAAGCCCCAAAGAAGAAACCCATCTACAGAAAGGGTTTCCAGTCGATCAAAATAAGACCTAACGTGTAATTACAAAAAGCCTTAGAAATCGAGGCCCATAACGAAACAGAGAGTATAATATTAGCCCAAACCTCACTAGGATGTCTCTCCACCCCTCTAAAAGTTTTATTATTCCTCTCCCCTCATAAACCCCATAAAATAGCACAAACGCAGCAAGCCATAAGAACCTTCCCTTCTCTCGGAATGGCGGATGGAGGAGGAACTCCTCGATCACCTCCCTGCATCGACATTGGCTAGCAGATTGGAACTCGAACACCTCAAAGAAGAGGCTCCAGACTAAGCGAGCAAAATCACAACCCCACAACAAATGATCAAGATTTTCCTTCGCTTTCCGACAAAGAATGCAACAAAAAGGGCCAACCATAGGGGTCATGACTCTCGATAGCCTGTCAAGAGTGTTAACACGACCCAGAATGACCTGTCAAACGAAGAACCAAACTTTCTTTGGAGCTTTAACCTTCCATAGACACAAAAAAACAGACTCTCTAACCGAGGAGGGATTAACCAAAAATTGAAAGAACGAACTACAAGAAAAGCCCCCAGAAGGGTTGAGACTCCAAAAACGAACATCCCTCCTATCCGGACTACGGCTAAACCCCTCTATCTAAGAAAGAAGGGTCATGATGCCCGTGGTTTCTCTATCAAATAATGGACGACTAAAACCAAAGGAAAATGAAGTGGAGCTCCCCACAGAGCCAAAGACTTCAGCCACAGTGCGATTTATGGCCATTCATTTACAAAGAGAGCTAAATTCTATGGCTTAATGCAGTTAGAGCATGCTTGGAGAAGTGTGGTTTGACTTCTAGATAAATAGAAGGAAATTTCAAGATTAGGAACATTTGATGAAGAAAATTTGGAATAAATGTTATTATTATTTTTTGATCTTTTGTTTACTTCTACATGCAATTATTCTCTACAAGTATAGTGCATTTTTATGATTCCAGCTTTTACGTGCTAGTCTTGTATTTTCATCTCATGAATGAAATTTTATTTCCTATTAAAGAAAACATCTAGGTGCATGTTTAATTCATTTTTCTGCTATAAATGGTATAAATGTGTAAGTAGTTTCATCATTCATGTGGCAACTAGTTTGTATCTAGTTTGTTGAAAGAATACACGATAGATATGCTAAAAAATTGTCTGATCTGCACAGGTTATAAAATGGACGAACAGGATCCCGAATCTAATTACTTGAGACTACAGTTCTCACGACATCCAGGTCCGAGGTCTGGTTCTGGATCAGGCGGCAAAAGGTGAATAAGCTTTAGAGACAGGATGACCAATTTAAATGGGAGACGTTTCATCATCTGGTGCACATTTTACTAGCTGCTTGTGCGCCCATTATATGTTAGAGATGCTGTTAAGATAGGCAAATTGTAGACGACCCCACTGAATATTAAAGTTACATGTAAATTTATGGGGATTAGATCCAAAGGGTTTCAATAGTCAATTGTGCAATTGAATTTTAATGTACAATCATGTCAATGGTTCAGAATTCGAAATATATATGGCACAGTTTTTATAACTGTTGTTTTTTATTCCCCACACCAAAGTAACATGCTTTCTCATAAATTCTGGCCTGGTGGATTAATATTTTGAACCCCA

mRNA sequence

ATGGCGGATGATTATTGGAATCGGCAGCAGCCTCTGCTTCCCTCGCCTGGCTTGCTTAAACGACCTCGTACTGAATATGAACTTCCATCCTCTGGGTTTCCTACTGGCCATGAAATGCACAGTTATTTAGCAAGTGACGATCATGGTGGTCCTCGGGCTGTAAAAGATACACAAACAATTGGATCAGCATACGATCGTTATCTCCAAAGTGTGCAACTTTCTTCTTTTACTTCCGGAGAAGTACCTACCCATGGGGAAATGGGGATGGGAAGGCCTGTTGCAAACAGAATGCCAATTGGGAGTAGAATGCCTGGGCCTTCAATACCTGATCCTGTTGTAATGAGTCGCCCTCCTGCAGTTTCTCCTGATCTTGCACCAAATGGTCGAAATATTGAGTATGGTAATCATCTTCCTATAGATTCAATGAACAGACCCGGACGTGAAACTGTGCCTCTTCCTCCTGATGCCTCCAACACTTTATATGTTGAAGGACTTCCTCCAGATAGTTCCAGGAGAGAAGTAGCTCCCTGTGCAGCAACTGCCATGAGTGCATTGCAAGGTTATAAAATGGACGAACAGGATCCCGAATCTAATTACTTGAGACTACAGTTCTCACGACATCCAGGTCCGAGGTCTGGTTCTGGATCAGGCGGCAAAAGGTGA

Coding sequence (CDS)

ATGGCGGATGATTATTGGAATCGGCAGCAGCCTCTGCTTCCCTCGCCTGGCTTGCTTAAACGACCTCGTACTGAATATGAACTTCCATCCTCTGGGTTTCCTACTGGCCATGAAATGCACAGTTATTTAGCAAGTGACGATCATGGTGGTCCTCGGGCTGTAAAAGATACACAAACAATTGGATCAGCATACGATCGTTATCTCCAAAGTGTGCAACTTTCTTCTTTTACTTCCGGAGAAGTACCTACCCATGGGGAAATGGGGATGGGAAGGCCTGTTGCAAACAGAATGCCAATTGGGAGTAGAATGCCTGGGCCTTCAATACCTGATCCTGTTGTAATGAGTCGCCCTCCTGCAGTTTCTCCTGATCTTGCACCAAATGGTCGAAATATTGAGTATGGTAATCATCTTCCTATAGATTCAATGAACAGACCCGGACGTGAAACTGTGCCTCTTCCTCCTGATGCCTCCAACACTTTATATGTTGAAGGACTTCCTCCAGATAGTTCCAGGAGAGAAGTAGCTCCCTGTGCAGCAACTGCCATGAGTGCATTGCAAGGTTATAAAATGGACGAACAGGATCCCGAATCTAATTACTTGAGACTACAGTTCTCACGACATCCAGGTCCGAGGTCTGGTTCTGGATCAGGCGGCAAAAGGTGA

Protein sequence

MADDYWNRQQPLLPSPGLLKRPRTEYELPSSGFPTGHEMHSYLASDDHGGPRAVKDTQTIGSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPIGSRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPIDSMNRPGRETVPLPPDASNTLYVEGLPPDSSRREVAPCAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGSGGKR

Homology

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BLAST of Spg008568 vs. NCBI nr
Match: XP_038884976.1 (RNA-binding protein 2-like isoform X2 [Benincasa hispida])

HSP 1 Score: 411.0 bits (1055), Expect = 6.5e-111
Identity = 205/257 (79.77%), Postives = 215/257 (83.66%), Query Frame = 0


Query: 1   MADDYWNRQQPLLPSPGLLKRPRTEYELPSSGFPTGHEMHSYLASDDHGGPRAVKDTQTI 60
           MADDYWNRQQPLLPSPG+LKRPRTEYELPSSG P+GHEMH+YLASDD GG R+VKDTQTI
Sbjct: 1   MADDYWNRQQPLLPSPGILKRPRTEYELPSSGLPSGHEMHNYLASDDRGGLRSVKDTQTI 60

Query: 61  GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPIGSRMPGPSIPDPVVMSRPPAV 120
           GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMP+GSRMPGP +PDP+VMSRPPAV
Sbjct: 61  GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPVGSRMPGPLLPDPIVMSRPPAV 120

Query: 121 SPDLAPNGRNIEYGNHLPIDSMNRPGRETVPLPPDASNTLYVEGLPPDSSRREVA----- 180
           SPD+APNGRNIEYGNHLP+DSM+RPGRETVPLPPDASNTLYVEGLPPDSSRREVA     
Sbjct: 121 SPDIAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAHIFRP 180

Query: 181 --------------------------------PCAATAMSALQGYKMDEQDPESNYLRLQ 221
                                            CAATAMSALQGYKMDEQDPESNYLRLQ
Sbjct: 181 FVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQ 240

[Close]

BLAST of Spg008568 vs. NCBI nr
Match: XP_038884975.1 (RNA-binding protein 2-like isoform X1 [Benincasa hispida])

HSP 1 Score: 409.1 bits (1050), Expect = 2.5e-110
Identity = 205/262 (78.24%), Postives = 215/262 (82.06%), Query Frame = 0


Query: 1   MADDYWNRQQPLLPSPGLLKRPRTEYELPSSGFPTGHEMHSYLASDDHGGPRAVKDTQTI 60
           MADDYWNRQQPLLPSPG+LKRPRTEYELPSSG P+GHEMH+YLASDD GG R+VKDTQTI
Sbjct: 1   MADDYWNRQQPLLPSPGILKRPRTEYELPSSGLPSGHEMHNYLASDDRGGLRSVKDTQTI 60

Query: 61  GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPIGSRMPGPSIPDPVVMSRPPAV 120
           GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMP+GSRMPGP +PDP+VMSRPPAV
Sbjct: 61  GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPVGSRMPGPLLPDPIVMSRPPAV 120

Query: 121 SPDLAPNGRNIEYGNHLPIDSMNRPGRETVPLPPDASNTLYVEGLPPDSSRREVA----- 180
           SPD+APNGRNIEYGNHLP+DSM+RPGRETVPLPPDASNTLYVEGLPPDSSRREVA     
Sbjct: 121 SPDIAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARILFI 180

Query: 181 -------------------------------------PCAATAMSALQGYKMDEQDPESN 221
                                                 CAATAMSALQGYKMDEQDPESN
Sbjct: 181 DIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESN 240

[Close]

BLAST of Spg008568 vs. NCBI nr
Match: XP_038884977.1 (RNA-binding protein 2-like isoform X3 [Benincasa hispida])

HSP 1 Score: 409.1 bits (1050), Expect = 2.5e-110
Identity = 205/262 (78.24%), Postives = 215/262 (82.06%), Query Frame = 0


Query: 1   MADDYWNRQQPLLPSPGLLKRPRTEYELPSSGFPTGHEMHSYLASDDHGGPRAVKDTQTI 60
           MADDYWNRQQPLLPSPG+LKRPRTEYELPSSG P+GHEMH+YLASDD GG R+VKDTQTI
Sbjct: 1   MADDYWNRQQPLLPSPGILKRPRTEYELPSSGLPSGHEMHNYLASDDRGGLRSVKDTQTI 60

Query: 61  GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPIGSRMPGPSIPDPVVMSRPPAV 120
           GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMP+GSRMPGP +PDP+VMSRPPAV
Sbjct: 61  GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPVGSRMPGPLLPDPIVMSRPPAV 120

Query: 121 SPDLAPNGRNIEYGNHLPIDSMNRPGRETVPLPPDASNTLYVEGLPPDSSRREVA----- 180
           SPD+APNGRNIEYGNHLP+DSM+RPGRETVPLPPDASNTLYVEGLPPDSSRREVA     
Sbjct: 121 SPDIAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARILFI 180

Query: 181 -------------------------------------PCAATAMSALQGYKMDEQDPESN 221
                                                 CAATAMSALQGYKMDEQDPESN
Sbjct: 181 DIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESN 240

[Close]

BLAST of Spg008568 vs. NCBI nr
Match: XP_038884978.1 (RNA-binding protein 2-like isoform X4 [Benincasa hispida])

HSP 1 Score: 409.1 bits (1050), Expect = 2.5e-110
Identity = 205/262 (78.24%), Postives = 215/262 (82.06%), Query Frame = 0


Query: 1   MADDYWNRQQPLLPSPGLLKRPRTEYELPSSGFPTGHEMHSYLASDDHGGPRAVKDTQTI 60
           MADDYWNRQQPLLPSPG+LKRPRTEYELPSSG P+GHEMH+YLASDD GG R+VKDTQTI
Sbjct: 1   MADDYWNRQQPLLPSPGILKRPRTEYELPSSGLPSGHEMHNYLASDDRGGLRSVKDTQTI 60

Query: 61  GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPIGSRMPGPSIPDPVVMSRPPAV 120
           GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMP+GSRMPGP +PDP+VMSRPPAV
Sbjct: 61  GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPVGSRMPGPLLPDPIVMSRPPAV 120

Query: 121 SPDLAPNGRNIEYGNHLPIDSMNRPGRETVPLPPDASNTLYVEGLPPDSSRREVA----- 180
           SPD+APNGRNIEYGNHLP+DSM+RPGRETVPLPPDASNTLYVEGLPPDSSRREVA     
Sbjct: 121 SPDIAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARILFI 180

Query: 181 -------------------------------------PCAATAMSALQGYKMDEQDPESN 221
                                                 CAATAMSALQGYKMDEQDPESN
Sbjct: 181 DIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESN 240

[Close]

BLAST of Spg008568 vs. NCBI nr
Match: XP_022141348.1 (RNA-binding protein 2-like [Momordica charantia])

HSP 1 Score: 407.5 bits (1046), Expect = 7.2e-110
Identity = 205/257 (79.77%), Postives = 211/257 (82.10%), Query Frame = 0


Query: 1   MADDYWNRQQPLLPSPGLLKRPRTEYELPSSGFPTGHEMHSYLASDDHGGPRAVKDTQTI 60
           MADDYWNRQQPLLPSPG+LKRPR +YELPSSG PTGHEMH+YL SDD GGPRAVKDTQTI
Sbjct: 1   MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTI 60

Query: 61  GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPIGSRMPGPSIPDPVVMSRPPAV 120
           GSAYDRYLQSVQLSSF SGEVPTHG+MGM RPVANRMP+GSRMPGPSIPDPVVMSRPPAV
Sbjct: 61  GSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAV 120

Query: 121 SPDLAPNGRNIEYGNHLPIDSMNRPGRETVPLPPDASNTLYVEGLPPDSSRREVA----- 180
           SPDLAPNGRNIEYGNHLP+DSM RPGRETVPLPPDASNTLYVEGLP DSSRREVA     
Sbjct: 121 SPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRP 180

Query: 181 --------------------------------PCAATAMSALQGYKMDEQDPESNYLRLQ 221
                                            CAATAMSALQGYKMDEQDPESNYLRLQ
Sbjct: 181 FVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQ 240

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BLAST of Spg008568 vs. ExPASy Swiss-Prot
Match: Q8H0P8 (RNA-binding protein 1 OS=Medicago truncatula OX=3880 GN=RBP1 PE=2 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 3.6e-56
Identity = 126/252 (50.00%), Postives = 152/252 (60.32%), Query Frame = 0


Query: 1   MADDYWNRQQPLLPSPGLLKRPRTEYELPSSGFPTGHEMHSYLASDDHGGPRAVKDTQTI 60
           MAD YWNRQQ LLP  GL KRPR +YE+P+SG P+G+EMH     +D  G   VKD++TI
Sbjct: 1   MADGYWNRQQSLLPHSGLHKRPRPDYEMPASGLPSGNEMHYLSREEDRSGHPMVKDSKTI 60

Query: 61  GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPIGSRMPGPSIPDPVVM-SRPPA 120
           GSAYDRYLQ  Q+ SFTSGE  T G +G+ R +         +P  S+ DP  M  R   
Sbjct: 61  GSAYDRYLQG-QVPSFTSGEASTVGALGLQRGIGG-------LPNHSLSDPSAMIGRHGG 120

Query: 121 VSPDLAPNGRNIEYGNHLPIDSMNRPGRETVPLPPDASNTLYVEGLPPDSSRREVA---- 180
             PDLAPNGR + YG   P+D ++R G E   LPPDAS TLY+EGLP D +RREVA    
Sbjct: 121 GGPDLAPNGRGMNYGFQPPMDPVSRHGPEPALLPPDASPTLYIEGLPSDCTRREVAHIFR 180

Query: 181 --------------------------------PCAATAMSALQGYKMDEQDPESNYLRLQ 216
                                            CAATA+SALQGYK+DE +PES++LRLQ
Sbjct: 181 PFVGYREVRLVSKEAKHRGDPLILCFVDFANPACAATALSALQGYKVDEINPESSHLRLQ 240

[Close]

BLAST of Spg008568 vs. ExPASy Swiss-Prot
Match: G7ID19 (RNA-binding protein 2 OS=Medicago truncatula OX=3880 GN=RBP2 PE=2 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 2.6e-54
Identity = 126/261 (48.28%), Postives = 160/261 (61.30%), Query Frame = 0


Query: 1   MADDYWNRQQPLLPSP-GLLKRPRTEYELPSSGFPTGHEMHSYLASDDHGGPRAVKDTQT 60
           MAD +WNRQQ  LP P G+LKRPRTEY+   SG  +G+E+H+Y+A ++  G + + DT+ 
Sbjct: 1   MADGFWNRQQQHLPPPGGMLKRPRTEYDTAPSGVTSGNEVHNYIAQNN--GHQMLNDTKI 60

Query: 61  IGSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPIGSRMPGPSIPDPVVMSRPPA 120
           +GSAYDR+LQS  L+SF SGE    G +G  R V         +PG S+ DP  M     
Sbjct: 61  LGSAYDRFLQSAGLTSFNSGEASVIGGVGFARGV-------GELPGHSLGDPSAMGHLSG 120

Query: 121 V--SPDLAPNGRNIEYGNHLPIDSMNRPGRETVPLPPDASNTLYVEGLPPDSSRREVA-- 180
           V   PDL+ NGR++ +G  LPID+++RPG ET+PLP DAS+TLYVEGLP DS++REVA  
Sbjct: 121 VGGGPDLSRNGRDVNFGGQLPIDAVSRPGPETIPLPRDASSTLYVEGLPSDSTKREVAHI 180

Query: 181 -----------------------------------PCAATAMSALQGYKMDEQDPESNYL 221
                                               CAATA+SALQGYK+DE +PES+YL
Sbjct: 181 FRPFVGYREVRLVAKESKHRGGDPLILCFVDFANPACAATALSALQGYKVDEINPESSYL 240

[Close]

BLAST of Spg008568 vs. ExPASy Swiss-Prot
Match: F4HWF9 (Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana OX=3702 GN=NSRB PE=2 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.1e-36
Identity = 106/258 (41.09%), Postives = 139/258 (53.88%), Query Frame = 0


Query: 1   MADDYWNRQQPLLPSPGLLKRPRTEYELPSSGFPTGHEMHSYLASD-DHGGPRAVKDTQT 60
           ++ D+++   P  P  G      T Y +PS       +MHSYL+ D D G P +VKDT++
Sbjct: 186 VSPDFFSTIGPTDPQEG------TPYLIPSG------DMHSYLSQDEDRGIPHSVKDTRS 245

Query: 61  IGSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPIGSRMPGPSIPDPVVMSRPPA 120
           IGSAYDRYLQS+Q     S E      +GM R   + M     MPGPS+ + ++     +
Sbjct: 246 IGSAYDRYLQSMQTFFVPSEEAGPFNGVGMVRQGGSNM-----MPGPSMGE-LMAGCGGS 305

Query: 121 VSPDLAPNGRNIEYGNHLPIDSMNRPGRETVPLPPDASNTLYVEGLPPDSSRREV----- 180
           +  D  PNGR++ +G    +DS+ RPGRE  PLPPD SNTLYVEGLP + SRREV     
Sbjct: 306 LPSDFRPNGRDMGFGQ---LDSVGRPGREPHPLPPDVSNTLYVEGLPSNCSRREVSHIFR 365

Query: 181 --------------------------------APCAATAMSALQGYKMDEQDPESNYLRL 221
                                           + CAATA+SALQ Y+MDE +P+S  LRL
Sbjct: 366 PFVGYREVRLVTQDSKHRSGDPTVLCFVDFENSACAATALSALQDYRMDEDEPDSKILRL 421

[Close]

BLAST of Spg008568 vs. ExPASy Swiss-Prot
Match: A1A6K6 (Nuclear speckle RNA-binding protein A OS=Arabidopsis thaliana OX=3702 GN=NSRA PE=2 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 5.3e-31
Identity = 102/251 (40.64%), Postives = 122/251 (48.61%), Query Frame = 0


Query: 1   MADDYWNRQ-QPLLPSPGLLKRPRTEYELPSSGFPTGHEMHSYLASDDHGGPRAVKDTQT 60
           MAD YWN+Q Q   P  G +KRPR+++E PSS    GH    Y   +D   P    DT+T
Sbjct: 1   MADGYWNQQRQQHHPPGGPMKRPRSDFEAPSSTMTIGHGGGYYPRDEDLDVP----DTRT 60

Query: 61  IGSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPIGSRMPGPSIPDPVVMSRPPA 120
           IGSAYDRYLQSVQ     SGE    G + MGR        G  +      D  ++ R   
Sbjct: 61  IGSAYDRYLQSVQ-----SGE---GGSVSMGRSGGGGGGGGGNV---QTIDDFMLRRGGV 120

Query: 121 VSPDLAPNGRNIEYGNHLPIDSMNRPGRETVPLPPDASNTLYVEGLPPDSSRREVA---- 180
           +  D  PNG  I +    P+   N        LP DASNTLYVEGLP + SRREVA    
Sbjct: 121 LPLDHGPNGHTIGFDPPEPVGRRN--------LPSDASNTLYVEGLPSNCSRREVAHIFR 180

Query: 181 ---------------------------------PCAATAMSALQGYKMDEQDPESNYLRL 214
                                             CAATA+SALQGY+MDE + +S +LRL
Sbjct: 181 PFVGYREVRLVTKDSKHRNGDPIVLCFVDFTNPACAATALSALQGYRMDENESDSKFLRL 228

[Close]

BLAST of Spg008568 vs. ExPASy Swiss-Prot
Match: Q6JB11 (Protein MATERNALLY EXPRESSED GENE 5 OS=Zea mays OX=4577 GN=MEG5 PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 4.2e-04
Identity = 21/34 (61.76%), Postives = 26/34 (76.47%), Query Frame = 0


Query: 142 MNRPGRETVPLPPDASNTLYVEGLPPDSSRREVA 176
           M   GR   PLPPDAS+TLY+EGLP + +RREV+
Sbjct: 22  MGYGGRPEPPLPPDASSTLYIEGLPANCTRREVS 55

[Close]

BLAST of Spg008568 vs. ExPASy TrEMBL
Match: A0A6J1CKA2 (RNA-binding protein 2-like OS=Momordica charantia OX=3673 GN=LOC111011769 PE=4 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 3.5e-110
Identity = 205/257 (79.77%), Postives = 211/257 (82.10%), Query Frame = 0


Query: 1   MADDYWNRQQPLLPSPGLLKRPRTEYELPSSGFPTGHEMHSYLASDDHGGPRAVKDTQTI 60
           MADDYWNRQQPLLPSPG+LKRPR +YELPSSG PTGHEMH+YL SDD GGPRAVKDTQTI
Sbjct: 1   MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTI 60

Query: 61  GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPIGSRMPGPSIPDPVVMSRPPAV 120
           GSAYDRYLQSVQLSSF SGEVPTHG+MGM RPVANRMP+GSRMPGPSIPDPVVMSRPPAV
Sbjct: 61  GSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAV 120

Query: 121 SPDLAPNGRNIEYGNHLPIDSMNRPGRETVPLPPDASNTLYVEGLPPDSSRREVA----- 180
           SPDLAPNGRNIEYGNHLP+DSM RPGRETVPLPPDASNTLYVEGLP DSSRREVA     
Sbjct: 121 SPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRP 180

Query: 181 --------------------------------PCAATAMSALQGYKMDEQDPESNYLRLQ 221
                                            CAATAMSALQGYKMDEQDPESNYLRLQ
Sbjct: 181 FVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQ 240

[Close]

BLAST of Spg008568 vs. ExPASy TrEMBL
Match: A0A1S3B4F0 (RNA-binding protein 2 OS=Cucumis melo OX=3656 GN=LOC103485638 PE=4 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 1.1e-108
Identity = 200/257 (77.82%), Postives = 212/257 (82.49%), Query Frame = 0


Query: 1   MADDYWNRQQPLLPSPGLLKRPRTEYELPSSGFPTGHEMHSYLASDDHGGPRAVKDTQTI 60
           MADDYWNRQQPLLPSP +LKRPRT+YELP+SG  TGH+MH+YLASDD GGPR+VKDTQTI
Sbjct: 1   MADDYWNRQQPLLPSPAMLKRPRTDYELPASGLSTGHDMHNYLASDDRGGPRSVKDTQTI 60

Query: 61  GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPIGSRMPGPSIPDPVVMSRPPAV 120
           GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMP+G+RMPGP +PDP+VMSRPPAV
Sbjct: 61  GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPVGNRMPGPLLPDPIVMSRPPAV 120

Query: 121 SPDLAPNGRNIEYGNHLPIDSMNRPGRETVPLPPDASNTLYVEGLPPDSSRREVA----- 180
           SPDLAPNGRNIEYGNHLP+DSM+RPGRETVPLPPDASNTLYVEGLPPDSSRREVA     
Sbjct: 121 SPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAHIFRP 180

Query: 181 --------------------------------PCAATAMSALQGYKMDEQDPESNYLRLQ 221
                                            CAATAMSALQGYKMDEQDPESNYLRLQ
Sbjct: 181 FVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQ 240

[Close]

BLAST of Spg008568 vs. ExPASy TrEMBL
Match: A0A6J1JXN9 (RNA-binding protein 2-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111489771 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 5.2e-106
Identity = 200/257 (77.82%), Postives = 209/257 (81.32%), Query Frame = 0


Query: 1   MADDYWNRQQPLLPSPGLLKRPRTEYELPSSGFPTGHEMHSYLASDDHGGPRAVKDTQTI 60
           MADDYWNRQQPLLPSPG+LKRPRTEYE PSSG P  HEMH+Y+A+DDHGGPRAVKDTQTI
Sbjct: 1   MADDYWNRQQPLLPSPGMLKRPRTEYEPPSSGLPAVHEMHNYIANDDHGGPRAVKDTQTI 60

Query: 61  GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPIGSRMPGPSIPDPVVMSRPPAV 120
           GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRP+ANRMPIG+RMPGP +PDPVVMSRP AV
Sbjct: 61  GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPLANRMPIGNRMPGPLLPDPVVMSRPLAV 120

Query: 121 SPDLAPNGRNIEYGNHLPIDSMNRPGRETVPLPPDASNTLYVEGLPPDSSRREVA----- 180
           SPDLA NGRNIEYGNHLP+DS NRP RETVPLPPDA+NTLYVEGLP DSSRREVA     
Sbjct: 121 SPDLALNGRNIEYGNHLPVDSTNRPIRETVPLPPDATNTLYVEGLPSDSSRREVAHIFRP 180

Query: 181 --------------------------------PCAATAMSALQGYKMDEQDPESNYLRLQ 221
                                            CAATAMSALQGYKMDEQDPESNYLRLQ
Sbjct: 181 FVGYKELRLVTKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQ 240

[Close]

BLAST of Spg008568 vs. ExPASy TrEMBL
Match: A0A6J1JRD4 (RNA-binding protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111486876 PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 3.7e-104
Identity = 197/258 (76.36%), Postives = 209/258 (81.01%), Query Frame = 0


Query: 1   MADDYWNRQQPLLPSPGLLKRPRTEYELPSSGFPTGHEMHSYLASDDHGGPRAVKDTQTI 60
           MADDYWNRQQPLLPSPG+LKRPR EYELPSSGFP GH+MHS+L+SDD  GP AVKDTQ I
Sbjct: 1   MADDYWNRQQPLLPSPGMLKRPRVEYELPSSGFPPGHDMHSHLSSDDRSGPPAVKDTQAI 60

Query: 61  GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPIGSRMPGPSIPDPVVMSRPPAV 120
           GSAYDRYLQSVQLSS  SGEVPT GEMGMGRP+ANR+P+GSRMPGPSIPDPVVMSRPPAV
Sbjct: 61  GSAYDRYLQSVQLSSAASGEVPTLGEMGMGRPIANRIPVGSRMPGPSIPDPVVMSRPPAV 120

Query: 121 SPDLAPNGRNIEYGNHLPIDSMNRPGRETVPLPPDASNTLYVEGLPPDSSRREV------ 180
           SPDLAPNGRNIEYGNHLP++S+NRPGRETVPLPPDASNTLYVEGLP DSSRREV      
Sbjct: 121 SPDLAPNGRNIEYGNHLPVESINRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRP 180

Query: 181 -------------------------------APCAATAMSALQGYKMDEQDPESNYLRLQ 221
                                          A CAATAMSALQGYKMDEQDP+SNYLRLQ
Sbjct: 181 FVGYKELRLVSKESKHRGGDPLILCFVDFANAACAATAMSALQGYKMDEQDPDSNYLRLQ 240

[Close]

BLAST of Spg008568 vs. ExPASy TrEMBL
Match: A0A6J1E3U2 (RNA-binding protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111430572 PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 3.7e-104
Identity = 197/258 (76.36%), Postives = 208/258 (80.62%), Query Frame = 0


Query: 1   MADDYWNRQQPLLPSPGLLKRPRTEYELPSSGFPTGHEMHSYLASDDHGGPRAVKDTQTI 60
           MADDYWNRQQPLLPSPG+LKRPR EYELPSSGFP GH+MH++LASDD  GP AVKDTQ I
Sbjct: 1   MADDYWNRQQPLLPSPGMLKRPRAEYELPSSGFPPGHDMHNHLASDDRSGPPAVKDTQAI 60

Query: 61  GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPIGSRMPGPSIPDPVVMSRPPAV 120
           GSAYDRYLQSVQLSS  SGEVPT GEMGMGRP+ANR+P+GSRMPGPSIPDPVVMSRPPAV
Sbjct: 61  GSAYDRYLQSVQLSSAASGEVPTLGEMGMGRPIANRIPVGSRMPGPSIPDPVVMSRPPAV 120

Query: 121 SPDLAPNGRNIEYGNHLPIDSMNRPGRETVPLPPDASNTLYVEGLPPDSSRREV------ 180
           SPDL PNGRNIEYGNHLP++SMNRPGRETVPLPPDASNTLYVEGLP DSSRREV      
Sbjct: 121 SPDLTPNGRNIEYGNHLPVESMNRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRP 180

Query: 181 -------------------------------APCAATAMSALQGYKMDEQDPESNYLRLQ 221
                                          A CAATAMSALQGYKMDEQDP+SNYLRLQ
Sbjct: 181 FVGYKELRLVSKESKHRGGDPLILCFVDFANAACAATAMSALQGYKMDEQDPDSNYLRLQ 240

[Close]

BLAST of Spg008568 vs. TAIR 10
Match: AT1G21320.2 (nucleotide binding;nucleic acid binding )

HSP 1 Score: 174.1 bits (440), Expect = 1.2e-43
Identity = 114/264 (43.18%), Postives = 152/264 (57.58%), Query Frame = 0


Query: 1   MADDYWNRQQ----PLLPSPGLL--KRPRTEYELPSSGFPTGHEMHSYLASD-DHGGPRA 60
           MAD+YWN+Q+    P+  +P +L  KRPR++++      P+G +MHSYL+ D D G P +
Sbjct: 1   MADEYWNQQRQYQLPISSNPHVLPPKRPRSDFQGTPYLIPSG-DMHSYLSQDEDRGIPHS 60

Query: 61  VKDTQTIGSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPIGSRMPGPSIPDPVV 120
           VKDT++IGSAYDRYLQS+Q     S E      +GM R   + M     MPGPS+ + ++
Sbjct: 61  VKDTRSIGSAYDRYLQSMQTFFVPSEEAGPFNGVGMVRQGGSNM-----MPGPSMGE-LM 120

Query: 121 MSRPPAVSPDLAPNGRNIEYGNHLPIDSMNRPGRETVPLPPDASNTLYVEGLPPDSSRRE 180
                ++  D  PNGR++ +G    +DS+ RPGRE  PLPPD SNTLYVEGLP + SRRE
Sbjct: 121 AGCGGSLPSDFRPNGRDMGFGQ---LDSVGRPGREPHPLPPDVSNTLYVEGLPSNCSRRE 180

Query: 181 V-------------------------------------APCAATAMSALQGYKMDEQDPE 221
           V                                     + CAATA+SALQ Y+MDE +P+
Sbjct: 181 VSHIFRPFVGYREVRLVTQDSKHRSGDPTVLCFVDFENSACAATALSALQDYRMDEDEPD 240

[Close]

BLAST of Spg008568 vs. TAIR 10
Match: AT1G21320.1 (nucleotide binding;nucleic acid binding )

HSP 1 Score: 154.8 bits (390), Expect = 7.8e-38
Identity = 106/258 (41.09%), Postives = 139/258 (53.88%), Query Frame = 0


Query: 1   MADDYWNRQQPLLPSPGLLKRPRTEYELPSSGFPTGHEMHSYLASD-DHGGPRAVKDTQT 60
           ++ D+++   P  P  G      T Y +PS       +MHSYL+ D D G P +VKDT++
Sbjct: 186 VSPDFFSTIGPTDPQEG------TPYLIPSG------DMHSYLSQDEDRGIPHSVKDTRS 245

Query: 61  IGSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPIGSRMPGPSIPDPVVMSRPPA 120
           IGSAYDRYLQS+Q     S E      +GM R   + M     MPGPS+ + ++     +
Sbjct: 246 IGSAYDRYLQSMQTFFVPSEEAGPFNGVGMVRQGGSNM-----MPGPSMGE-LMAGCGGS 305

Query: 121 VSPDLAPNGRNIEYGNHLPIDSMNRPGRETVPLPPDASNTLYVEGLPPDSSRREV----- 180
           +  D  PNGR++ +G    +DS+ RPGRE  PLPPD SNTLYVEGLP + SRREV     
Sbjct: 306 LPSDFRPNGRDMGFGQ---LDSVGRPGREPHPLPPDVSNTLYVEGLPSNCSRREVSHIFR 365

Query: 181 --------------------------------APCAATAMSALQGYKMDEQDPESNYLRL 221
                                           + CAATA+SALQ Y+MDE +P+S  LRL
Sbjct: 366 PFVGYREVRLVTQDSKHRSGDPTVLCFVDFENSACAATALSALQDYRMDEDEPDSKILRL 421

[Close]

BLAST of Spg008568 vs. TAIR 10
Match: AT1G76940.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 136.0 bits (341), Expect = 3.8e-32
Identity = 102/251 (40.64%), Postives = 122/251 (48.61%), Query Frame = 0


Query: 1   MADDYWNRQ-QPLLPSPGLLKRPRTEYELPSSGFPTGHEMHSYLASDDHGGPRAVKDTQT 60
           MAD YWN+Q Q   P  G +KRPR+++E PSS    GH    Y   +D   P    DT+T
Sbjct: 1   MADGYWNQQRQQHHPPGGPMKRPRSDFEAPSSTMTIGHGGGYYPRDEDLDVP----DTRT 60

Query: 61  IGSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPIGSRMPGPSIPDPVVMSRPPA 120
           IGSAYDRYLQSVQ     SGE    G + MGR        G  +      D  ++ R   
Sbjct: 61  IGSAYDRYLQSVQ-----SGE---GGSVSMGRSGGGGGGGGGNV---QTIDDFMLRRGGV 120

Query: 121 VSPDLAPNGRNIEYGNHLPIDSMNRPGRETVPLPPDASNTLYVEGLPPDSSRREVA---- 180
           +  D  PNG  I +    P+   N        LP DASNTLYVEGLP + SRREVA    
Sbjct: 121 LPLDHGPNGHTIGFDPPEPVGRRN--------LPSDASNTLYVEGLPSNCSRREVAHIFR 180

Query: 181 ---------------------------------PCAATAMSALQGYKMDEQDPESNYLRL 214
                                             CAATA+SALQGY+MDE + +S +LRL
Sbjct: 181 PFVGYREVRLVTKDSKHRNGDPIVLCFVDFTNPACAATALSALQGYRMDENESDSKFLRL 228

[Close]

BLAST of Spg008568 vs. TAIR 10
Match: AT1G76940.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 81.3 bits (199), Expect = 1.1e-15
Identity = 55/141 (39.01%), Postives = 66/141 (46.81%), Query Frame = 0


Query: 110 DPVVMSRPPAVSPDLAPNGRNIEYGNHLPIDSMNRPGRETVPLPPDASNTLYVEGLPPDS 169
           D  ++ R   +  D  PNG  I +    P+   N        LP DASNTLYVEGLP + 
Sbjct: 42  DDFMLRRGGVLPLDHGPNGHTIGFDPPEPVGRRN--------LPSDASNTLYVEGLPSNC 101

Query: 170 SRREVA-------------------------------------PCAATAMSALQGYKMDE 214
           SRREVA                                      CAATA+SALQGY+MDE
Sbjct: 102 SRREVAHIFRPFVGYREVRLVTKDSKHRNGDPIVLCFVDFTNPACAATALSALQGYRMDE 161

The following BLAST results are available for this feature:

BLAST of Spg008568 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038884976.1	6.5e-111	79.77	RNA-binding protein 2-like isoform X2 [Benincasa hispida]	[more]
XP_038884975.1	2.5e-110	78.24	RNA-binding protein 2-like isoform X1 [Benincasa hispida]	[more]
XP_038884977.1	2.5e-110	78.24	RNA-binding protein 2-like isoform X3 [Benincasa hispida]	[more]
XP_038884978.1	2.5e-110	78.24	RNA-binding protein 2-like isoform X4 [Benincasa hispida]	[more]
XP_022141348.1	7.2e-110	79.77	RNA-binding protein 2-like [Momordica charantia]	[more]

BLAST of Spg008568 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8H0P8	3.6e-56	50.00	RNA-binding protein 1 OS=Medicago truncatula OX=3880 GN=RBP1 PE=2 SV=1	[more]
G7ID19	2.6e-54	48.28	RNA-binding protein 2 OS=Medicago truncatula OX=3880 GN=RBP2 PE=2 SV=1	[more]
F4HWF9	1.1e-36	41.09	Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana OX=3702 GN=NSRB PE...	[more]
A1A6K6	5.3e-31	40.64	Nuclear speckle RNA-binding protein A OS=Arabidopsis thaliana OX=3702 GN=NSRA PE...	[more]
Q6JB11	4.2e-04	61.76	Protein MATERNALLY EXPRESSED GENE 5 OS=Zea mays OX=4577 GN=MEG5 PE=2 SV=1	[more]

BLAST of Spg008568 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CKA2	3.5e-110	79.77	RNA-binding protein 2-like OS=Momordica charantia OX=3673 GN=LOC111011769 PE=4 S...	[more]
A0A1S3B4F0	1.1e-108	77.82	RNA-binding protein 2 OS=Cucumis melo OX=3656 GN=LOC103485638 PE=4 SV=1	[more]
A0A6J1JXN9	5.2e-106	77.82	RNA-binding protein 2-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11148977...	[more]
A0A6J1JRD4	3.7e-104	76.36	RNA-binding protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111486876 PE=4 SV=1	[more]
A0A6J1E3U2	3.7e-104	76.36	RNA-binding protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111430572 PE=4 SV...	[more]

BLAST of Spg008568 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G21320.2	1.2e-43	43.18	nucleotide binding;nucleic acid binding	[more]
AT1G21320.1	7.8e-38	41.09	nucleotide binding;nucleic acid binding	[more]
AT1G76940.1	3.8e-32	40.64	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G76940.2	1.1e-15	39.01	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 186..220
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..159
None	No IPR available	PANTHER	PTHR10501	U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B	coord: 177..220
None	No IPR available	PANTHER	PTHR10501:SF53	NUCLEAR SPECKLE RNA-BINDING PROTEIN A-RELATED	coord: 177..220
None	No IPR available	PANTHER	PTHR10501	U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B	coord: 8..175
None	No IPR available	PANTHER	PTHR10501:SF53	NUCLEAR SPECKLE RNA-BINDING PROTEIN A-RELATED	coord: 8..175

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg008568.1	Spg008568.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding