Spg008516 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg008516
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Ty3-gypsy retrotransposon protein
Location	scaffold10: 32281672 .. 32287827 (+)
RNA-Seq Expression	Spg008516
Synteny	Spg008516

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATCCAGTACCAATCTACACGAACTTGAACTAGAAATTTCAAGTCCTGCTTCTGTCCTCAAGGAGTTCATCGCAGATGGACTCCTTGAGGCAAAAACCTTTGAAGCGAAAGAAGTGGAAAAGTCGGAGGAAACCGCTTATCACCACTATTCTTTTAACACGTGTCACTTTTTTATTTTTTATTTACTTTTATTAAATGTCAAAATCTCATTGTTGAGTGAGAAATTTCGGCCAATCACAAATTGTCACGTCATTAATTTGAATTAATGATAAAATAAATTTGGGACAATTACAAATTTACATGTGTCCCTAAATTAAATTAATAGACATTAAAATTCGGCAAATCAAACAATGCCACTTGTCTATTATTGATCCATCAGATGACATAAGCCGATACCAATCAAATTATGCCACGTGGCAATTGGACCCGAGACTAATGTGACCCGAGATCATCGAAGAAATTGGGCTAAATTAAAAGAATCCAATTTTATTAAAAATAAGTTGGATTAAAGCCCAAATATAGCCTAAGCCCAGAGGTTGGGCCCAAGCCCAAGCCCATATGAGGTCCATCAAACTCTATAAATAGAGGAGACCACCATTTATTTTGGGCATTCAGACAGATTCAGACAGAGTCAGAGAAGCCAGAGCCCAGAGCATTCTCCCAAGGTCTAGAGTCTTCAGAAGTCAGAGAGTCCAGAGAATTCAAAAGATCCAAGATTCAGAATTCGTCAATCTCAAGACTCAGAAGATCCAACGACTGGAAGACTCCAAAGAATCAACCGTTTCTTCATCAAGATACAAGTTGAAGATTCAACCTTCCTCCGTCTGAGATCAAGCTCGACGGCCCTCAGATCAGACTCTACATTTCGAGAGAAAGCATCAGAGGATAAATATTAGAGACTGTAACACTTCTACATACAAAATCAATAAAATTAAGTTCATTTCCACGAATTAAATTTCCTTTGTTGAAATCTCGTGTGAACAAATTGGCACGCCCAGTGGGACAATCTCTACCTCTCATCTCTTTTTCTCGCAAAGAAATCATGACTTCCGAAGAAGCTTCTTCAAAGATCGCTGCTTCAAGCAACTCCTATGTGGGGCCAATTACTCGCAGTCGCTCCAAGGAAACCCAACATGAAGACAGCCAAACTCCTGTCATTGCAAACAAGATGCTGAGACGCATGACAGAATCTGCTCAACTGGAAATCGCCACTGCAGAAAATCTGATGCTTGGCAAATTCATCTCTTCTTCTCAGCAACCAAGCGAAACATCCAGTCCTGATATGATGTCTGTTATGATAACTGATGCTGGAACTAGTGAAGAACGAATGGCTGAAGTTGAGAAGAAAATCAGCATGTTACTGAAGATGGTCGAAGAGAAAGACCAAGAAATCGCCTCTCTCAGGAACCAGATGGAAAGTCGGGATGTTGCTGAATCGAGTCAGACCCCTACCATCAAAGATAAAGGAAAGATTATTGCACAAGATCAGTCACAACATTCCGCTTCTATTGCTTCACTGTCCGTCCAACAGCTCCAGGATATGATCATGAATTCCATCAGAGCTCAATATGGTGGACCGACTCAGAACTCTCTCTTGTATTCCAAGCCATATACCAAGAGAATCGACAATCTGAGAATGCCTCATGGATACCAGCCACCGAAGTTTCAACAATTTGACGGGAAGGGCAATCCCAAACAGCACGTTGCTCATTTCGTCGAGACATGTGAAAACGCTGGTACTAGAGGAGACCTACTAGTCAGGCAGTTCGTACGAACACTGAAGGGGAATGCTTTCGACTAGTATACCGACCTTGAGCCTGAGACTATCGATAGTTGGGAACAACTTGAGAATGAGTTCCTCAACCGCTTCTACAGCACAAGACGAACCGTTAGTATGACGGAGCTCACCAGCGCTAAACAACGGAAAGGTGAACCAGTTGTTGACTACATCAACCGTTGGAGAGCTTTGAGCTTAGATTGCAAGGACCGACTCACCGAATTGTCTGCTGTTGAAATGTGCACCCAAGGCATTCATTGGGGACTCCTTTATATCCTGCAAGGAATAAAGCCCCGCACTTTCGAGGAGTTGGCAACCTGCGCTCATGACATGGAATTGAGCATTGCTACTAGAGGGAACAAAGATTCTATTGTCCCCGATGGTAGGAAAGAAAAGAAAGAAGTTAAGAATACTGAGAAAGCTACCAAAAGCACTACGAAAGAGTCAATGGTAGTCAATGCAGCTCCTTTCAAGTTTTCTCCGAAAGGAAAAGAAAAGAAGATAGAGAAACAACAAGAGGGAGGTGAGAGGCGTCGTCTGACCTTGAAAGAAAGGCAAGAGAAAGTTTACCCTTTTCCAGATTCCGACATTTCAGATATGTTAGAACAACTTCTGGAAAAACAACTTATTGAACTACCAGAATGCAAGCGACCATAAGAGATGGGGAGAGTTAATGATCCCAACTACTACAAATATCACCGAGTCATCAGCCACCCGGTGGAAAAGTGCTTCGTTCTGAAGGAGCTAATTTTGAAGTTAGCTAAAGAAAAGAAGATTGAGTTAGATCTTGATGAGGTAGCTCAATCAAATCATGCGACGATAGCAACAAATCTCAACGATTGAGCATCCCCAAGCCTGGCTCATAATTCAGTAGCAAGTCTGATCCAGTTCGAGACATTAAAGCCGATCATTATTTGGCTTCAGCAAGAATCTTCAAGTGACATCTTCCAAGACCAACTTGAGTCTGTTGAAAATGAAGATGAAGGATGGACTTTGGTGACTCGTCGAAAGAAGCAAAAGAAACATTTCGTTCAAAAAAAGTCTCACATGTTCCGAAACTACAGAAGAAAGAACATGTCACAAAAGCAAAAGAGAAAGACAAAAGGTTTAAGAAAACCTAAACTAGTTGTCGAAGAGAATCAAGATTTTGTTCTGTCTCGACATCCAATAACCCTTAAAGATTTCTTCCCAAAGAACTTTATTAATGACGATCATGAGGATATACCCGAGATAGTCGCATGTCATGCTGTCAATGCATTCGAAGAAGGCAATTCTTCTTCAAGTCTATCTCAGGTGATGGCAAGGCCAAAAGATTCACCTTCATTCACAATGGATGATTTGGTGTCACTCCCTCAAGCAACCAAAGATGCTATTGTTGAAATATTGAAAAGTTCTAACGTTGCAGACGTTCCAGACTTGCAAGGACATAGATGTGCCTCATGTTGTATGTCCATTAGCTTCACAGATGAAGACTTGATGTTGGGATCGAAGCCTCATAATAGGCCCTTGTTCGTCTCGGGATATATTCGAGAGCAAAAAGTTGGTCGAATTCTCATCGACGATGGATCTGCGGTGAATATAATGCCTAAGTCAACCATGACACAGATAGGAATTTCAATGGATGAACTATCAAACAGTAGGTTGGTTATTCAAGGCTTTAACCAAGGCGGCCAACGAGCAATCGGCATGATCCGTTTGGAGCTTGTTATTGGAGATTTGAAGGCCAACACTTTATTCCATATCATAGATTCCAAGACCACTTACAAGTTACTGTTAGGTCGTCCTTGGATTCATGGAAATGGAGTAATATCTTCTACACTTCATCAGTGTTTCAAGTTCTATCAAGACGGTGTCAAGAAAGTTGAAGCCGACACGAATCCATTCTCAAAGACAGAATCCCACTTTGCAGATGCAAAGTTTTATATGCAGAATGATAAAGCAGGGGAGATCATACCAGCTGAGATTCCTCTGATTGAAAGTCACAAAGTAGAGCACCCAAAGAATGCGAAGAAGGAGTCGATCGAAGAAGTAGATGCTTGTGAAGTTCAACCAAAGGAAGCATCCGTTCACCCTGTAAAATCGAAAGCTCCAAAGGAAGAGGCATTGTCAAACGTCCCTATATTGCGCTACGTTCCTTTATCTCGACGCAAGAAAGGGGAATCACCATTCACAGAATGTTCAGGAATTTTGAAGGTTGGTGATGTGGAGATTCTAAAAGAAAATTTCACCACACCTCTGACAACAATTACCAAGCAAGAGATTCAGGAATCAAAGACTGATCGTACCAAAGTGATTTTGCCAGAAAGACGAACGAAGGCTGGATTTGACCCAAATGCATACAAACTCCTAGAAAAGGCAGGATACGACTTTACAACTCATACTGAGTTTAAAAGTCTAAAAATTTTCGATGGGAGATCTGAGCTTTCTCCAACACAGAAGAAGCTCCAAAAAGAAGGTTATGCCATACCATCCTCGAGAGCCGGACTAGGATATAATCCCCTAGTGCCAGTTCGTATAACCAGAAAATGGAAGGTTGCAGATGCACATCACATAACGATAGAAGAGATGTGCGATCCAGAAGATAAAAAGAACGATGATAGCCAGAAAATCTCTGTCTTTGATCCCATTAAAGCGCCGACTACTCGTCTTTCAGTTCATCAGCGGCTGAAATATTCATCTTCAGAAAAGGAAGGTCAGGGAAAAACTTCTGTTCCTACTCGACGTTCAGTGTTTCATCGTCTGAGTGTGTCTACATCGAAGAAAGTAGATGAACCTTTGAGATCCGTGTTTGACCGCCTTCAAGCAACAAATGGCCAATGCAAGGGAAAGTTGAAAAGTCTCGAAACAGAAGAATCTGATGAAATGAATGACAACAATGGTTTTTCCAGTACTGTTCCTTCGCGGATGAAGAGAAAGCCTTTCGTTCTCATAAATACGGAAGGTACTTTAAAAGTAAAGCGACAGTTAGTCATTCTAACTAACCCTTCGAAGATGAACCAAGAGTTCGAAGAAGAACAGGCCAATTGTTGTCATATTTCTTTCGAAGAAATGCCAGACACTGAAATTTCTGAAGAAGATGCTGAAGAAGCACCGACATCGTTAGAGGATGGCAGCCAATCAACAATTGATGAGCTCAAAGAGGTAAACCTGGGTACGACAGAAGAGCCACGCCTGACATTCATCAGTGCGTCACTTAGTGCTGAAGAGGAACATGAATACCTGAATTTACTCGTTACATATAAAGATGTCTTCGCTTGGTCGTACAAAGAGATGCCAGGACTCGATCCAAAGATTGCAGTCCACCATCTTGCGACTAAACAAGGATATCGACCTATTAAACAGGCCCAAAGGCGTTTCCGACCGGAGATCGTTCCTCAAATTGAAATTGAAGTCAACAAGTTGATAGAAGCAGGGTTCATTCGGGAAGTGAAATATCCAACATGGATAGCAAACATTGTGCCAGTAAAAAAGAAGAATGGACAACTGCGAGTATGCGTGGACTTTCGTGACTTGAATAATGCTTGTCCCAAAGATGACTTTCCATTGCCCATCACTGAACTTATGGTCGATGCCACTACAGGACATGAAGCCTTATCTTTCATGGATGGATCATCAGGGAATAATCAAATTCGAATGGCCCTTGAAGATGAAAAGATCACAGCATTTCGAACTCCAAAAGGAATATACTGTTACAAGGTGATGCCTTTTGGATTAAAGAACGCCGGGGCAACTTACCAACGAGCCATGCAGAAGATCTTCGATGATATGCTCCACAAACGTGTTGAGTGCTATGTTGATGATCTCGTGGTCAAATCCAAGAAACGAGAGGACCACTTGCAAGATTTGAAGATAGTTTTTGACCGTTTGAGAAAGTGCCAGTTGAAAATGAATCCTCTTAAATGCGCCTTCGGTGTGACATCAGGAAAGTTTCTTGGTTTCGTAGTAAGGCATCGAGGAATTGAAATCGACCAATCAAAGATTGAAGCCATTCAGAAAATGCCAGAACCACGAAACTTGCGGGAATTAAGAAGTCTCTTAGGGCGTCTGGCCTATATCAGAAGGTTCATCTCTAATCTAGCAGGTCGATATCAGCCATTTCAAAGACTGATGAGAAAAGACACAATCTTTGAATGGGATAAAGCTTGTTGATAACTCTCCAAAAGGTAGTTATTTAGGCCTCATTTCTATATTGATTTGTGTGTCTTTTGTGCTTAATAGGGTTGGTTTTAGATATATATTACATGTTTTAACCCATTTGGAAGAATGGAAGCTTTGGAAATCATTTTGTGCAGAATCTGTTGCTGGGCGACTTCAGGGAGCAAACTCTGTGCTGCAGCAAAGTTGGGAGCAAAACTGCCACGTCACAGCTCATTAG

mRNA sequence

ATGGCATCCAGTACCAATCTACACGAACTTGAACTAGAAATTTCAAGTCCTGCTTCTGTCCTCAAGGAGTTCATCGCAGATGGACTCCTTGAGGCAAAAACCTTTGAAGCGAAAGAAATTCAGACAGAGTCAGAGAAGCCAGAGCCCAGAGCATTCTCCCAAGGTCTAGAGTCTTCAGAAGTCAGAGAGTCCAGAGAATTCAAAAGATCCAAGATTCAGAATTCTCGCTCCAAGGAAACCCAACATGAAGACAGCCAAACTCCTGTCATTGCAAACAAGATGCTGAGACGCATGACAGAATCTGCTCAACTGGAAATCGCCACTGCAGAAAATCTGATGCTTGGCAAATTCATCTCTTCTTCTCAGCAACCAAGCGAAACATCCAGTCCTGATATGATGTCTGTTATGATAACTGATGCTGGAACTAGTGAAGAACGAATGGCTGAAGTTGAGAAGAAAATCAGCATGTTACTGAAGATGGTCGAAGAGAAAGACCAAGAAATCGCCTCTCTCAGGAACCAGATGGAAAGTCGGGATGTTGCTGAATCGAAATCTTCAAGTGACATCTTCCAAGACCAACTTGAGTCTGTTGAAAATGAAGATGAAGGATGGACTTTGGTGACTCGTCGAAAGAAGCAAAAGAAACATTTCGTTCAAAAAAAGTCTCACATGTTCCGAAACTACAGAAGAAAGAACATGTCACAAAAGCAAAAGAGAAAGACAAAAGGTTTAAGAAAACCTAAACTAGTTGTCGAAGAGAATCAAGATTTTGTTCTGTCTCGACATCCAATAACCCTTAAAGATTTCTTCCCAAAGAACTTTATTAATGACGATCATGAGGATATACCCGAGATAGTCGCATGTCATGCTGTCAATGCATTCGAAGAAGGCAATTCTTCTTCAAGTCTATCTCAGAATGCGAAGAAGGAGTCGATCGAAGAAGTAGATGCTTGTGAAGTTCAACCAAAGGAAGCATCCGTTCACCCTGTAAAATCGAAAGCTCCAAAGGAAGAGGCATTGTCAAACGTCCCTATATTGCGCTACGTTCCTTTATCTCGACGCAAGAAAGGGGAATCACCATTCACAGAATGTTCAGGAATTTTGAAGGTTGGTGATGTGGAGATTCTAAAAGAAAATTTCACCACACCTCTGACAACAATTACCAAGCAAGAGATTCAGGAATCAAAGACTGATCGTACCAAAGTGATTTTGCCAGAAAGACGAACGAAGGCTGGATTTGACCCAAATGCATACAAACTCCTAGAAAAGGCAGGATACGACTTTACAACTCATACTGAGTTTAAAAGTCTAAAAATTTTCGATGGGAGATCTGAGCTTTCTCCAACACAGAAGAAGCTCCAAAAAGAAGGTTATGCCATACCATCCTCGAGAGCCGGACTAGGATATAATCCCCTAGTGCCAGTTCGTATAACCAGAAAATGGAAGGTTGCAGATGCACATCACATAACGATAGAAGAGATGTGCGATCCAGAAGATAAAAAGAACGATGATAGCCAGAAAATCTCTGTCTTTGATCCCATTAAAGCGCCGACTACTCGTCTTTCAGTTCATCAGCGGCTGAAATATTCATCTTCAGAAAAGGAAGGTCAGGGAAAAACTTCTGTTCCTACTCGACGTTCAGTGTTTCATCGTCTGAGTGTGTCTACATCGAAGAAAGTAGATGAACCTTTGAGATCCGTGTTTGACCGCCTTCAAGCAACAAATGGCCAATGCAAGGGAAAGTTGAAAAGTCTCGAAACAGAAGAATCTGATGAAATGAATGACAACAATGGTTTTTCCAGTACTGTTCCTTCGCGGATGAAGAGAAAGCCTTTCGTTCTCATAAATACGGAAGAATCTGTTGCTGGGCGACTTCAGGGAGCAAACTCTGTGCTGCAGCAAAGTTGGGAGCAAAACTGCCACGTCACAGCTCATTAG

Coding sequence (CDS)

ATGGCATCCAGTACCAATCTACACGAACTTGAACTAGAAATTTCAAGTCCTGCTTCTGTCCTCAAGGAGTTCATCGCAGATGGACTCCTTGAGGCAAAAACCTTTGAAGCGAAAGAAATTCAGACAGAGTCAGAGAAGCCAGAGCCCAGAGCATTCTCCCAAGGTCTAGAGTCTTCAGAAGTCAGAGAGTCCAGAGAATTCAAAAGATCCAAGATTCAGAATTCTCGCTCCAAGGAAACCCAACATGAAGACAGCCAAACTCCTGTCATTGCAAACAAGATGCTGAGACGCATGACAGAATCTGCTCAACTGGAAATCGCCACTGCAGAAAATCTGATGCTTGGCAAATTCATCTCTTCTTCTCAGCAACCAAGCGAAACATCCAGTCCTGATATGATGTCTGTTATGATAACTGATGCTGGAACTAGTGAAGAACGAATGGCTGAAGTTGAGAAGAAAATCAGCATGTTACTGAAGATGGTCGAAGAGAAAGACCAAGAAATCGCCTCTCTCAGGAACCAGATGGAAAGTCGGGATGTTGCTGAATCGAAATCTTCAAGTGACATCTTCCAAGACCAACTTGAGTCTGTTGAAAATGAAGATGAAGGATGGACTTTGGTGACTCGTCGAAAGAAGCAAAAGAAACATTTCGTTCAAAAAAAGTCTCACATGTTCCGAAACTACAGAAGAAAGAACATGTCACAAAAGCAAAAGAGAAAGACAAAAGGTTTAAGAAAACCTAAACTAGTTGTCGAAGAGAATCAAGATTTTGTTCTGTCTCGACATCCAATAACCCTTAAAGATTTCTTCCCAAAGAACTTTATTAATGACGATCATGAGGATATACCCGAGATAGTCGCATGTCATGCTGTCAATGCATTCGAAGAAGGCAATTCTTCTTCAAGTCTATCTCAGAATGCGAAGAAGGAGTCGATCGAAGAAGTAGATGCTTGTGAAGTTCAACCAAAGGAAGCATCCGTTCACCCTGTAAAATCGAAAGCTCCAAAGGAAGAGGCATTGTCAAACGTCCCTATATTGCGCTACGTTCCTTTATCTCGACGCAAGAAAGGGGAATCACCATTCACAGAATGTTCAGGAATTTTGAAGGTTGGTGATGTGGAGATTCTAAAAGAAAATTTCACCACACCTCTGACAACAATTACCAAGCAAGAGATTCAGGAATCAAAGACTGATCGTACCAAAGTGATTTTGCCAGAAAGACGAACGAAGGCTGGATTTGACCCAAATGCATACAAACTCCTAGAAAAGGCAGGATACGACTTTACAACTCATACTGAGTTTAAAAGTCTAAAAATTTTCGATGGGAGATCTGAGCTTTCTCCAACACAGAAGAAGCTCCAAAAAGAAGGTTATGCCATACCATCCTCGAGAGCCGGACTAGGATATAATCCCCTAGTGCCAGTTCGTATAACCAGAAAATGGAAGGTTGCAGATGCACATCACATAACGATAGAAGAGATGTGCGATCCAGAAGATAAAAAGAACGATGATAGCCAGAAAATCTCTGTCTTTGATCCCATTAAAGCGCCGACTACTCGTCTTTCAGTTCATCAGCGGCTGAAATATTCATCTTCAGAAAAGGAAGGTCAGGGAAAAACTTCTGTTCCTACTCGACGTTCAGTGTTTCATCGTCTGAGTGTGTCTACATCGAAGAAAGTAGATGAACCTTTGAGATCCGTGTTTGACCGCCTTCAAGCAACAAATGGCCAATGCAAGGGAAAGTTGAAAAGTCTCGAAACAGAAGAATCTGATGAAATGAATGACAACAATGGTTTTTCCAGTACTGTTCCTTCGCGGATGAAGAGAAAGCCTTTCGTTCTCATAAATACGGAAGAATCTGTTGCTGGGCGACTTCAGGGAGCAAACTCTGTGCTGCAGCAAAGTTGGGAGCAAAACTGCCACGTCACAGCTCATTAG

Protein sequence

MASSTNLHELELEISSPASVLKEFIADGLLEAKTFEAKEIQTESEKPEPRAFSQGLESSEVRESREFKRSKIQNSRSKETQHEDSQTPVIANKMLRRMTESAQLEIATAENLMLGKFISSSQQPSETSSPDMMSVMITDAGTSEERMAEVEKKISMLLKMVEEKDQEIASLRNQMESRDVAESKSSSDIFQDQLESVENEDEGWTLVTRRKKQKKHFVQKKSHMFRNYRRKNMSQKQKRKTKGLRKPKLVVEENQDFVLSRHPITLKDFFPKNFINDDHEDIPEIVACHAVNAFEEGNSSSSLSQNAKKESIEEVDACEVQPKEASVHPVKSKAPKEEALSNVPILRYVPLSRRKKGESPFTECSGILKVGDVEILKENFTTPLTTITKQEIQESKTDRTKVILPERRTKAGFDPNAYKLLEKAGYDFTTHTEFKSLKIFDGRSELSPTQKKLQKEGYAIPSSRAGLGYNPLVPVRITRKWKVADAHHITIEEMCDPEDKKNDDSQKISVFDPIKAPTTRLSVHQRLKYSSSEKEGQGKTSVPTRRSVFHRLSVSTSKKVDEPLRSVFDRLQATNGQCKGKLKSLETEESDEMNDNNGFSSTVPSRMKRKPFVLINTEESVAGRLQGANSVLQQSWEQNCHVTAH

Homology

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BLAST of Spg008516 vs. NCBI nr
Match: TYK05005.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 260.0 bits (663), Expect = 5.4e-65
Identity = 214/640 (33.44%), Postives = 279/640 (43.59%), Query Frame = 0


Query: 191 QDQLESVENEDEGWTLVTRRKKQKKHFVQKKSHMFRNYRRKNMSQKQKRKTKGLRKPKLV 250
           Q++   +E +DE WT+VTRRKK+K   +QK+   +RNYRR N +QK K+K K  RK KL+
Sbjct: 364 QEKERLIEEDDERWTIVTRRKKRKSTPIQKEHRFYRNYRRWNKAQKNKKKKK-TRKLKLM 423

Query: 251 VEENQDFVLSRHPITLKDFFPKNFINDDHEDIPEIVACHAVNAFEEG------------- 310
            +E++DF  ++  ITL DFFP  F+ D  ++ P +VACHA+NA EE              
Sbjct: 424 HKEDKDFPRTQRLITLADFFPTRFLGDHQDENPGVVACHAINATEEESIPLRSLEEEKVS 483

Query: 311 ---------------------------NSSSSLSQNA----------------------- 370
                                      NS++S S  +                       
Sbjct: 484 KDLSRFNVDDLLSLPQEIKTILINALLNSAASSSSASTVTYESTPYCMSIDFSNDDLLLG 543

Query: 371 ------------------------------------------------------------ 430
                                                                       
Sbjct: 544 SKLHNRPLYVSGYVREQRVDRILVDNGSAVNIMPKSTIRQLGILMKELSNSKLVIQGFNQ 603

Query: 431 ---------------------------------KKESIEEVDACEV-------------- 490
                                            K +S  EV + EV              
Sbjct: 604 GSQRVIDGVKKVEADSNPFSEAESHFADAKFYLKNDSSPEVVSVEVPLVNREDNLQLKSL 663

Query: 491 --------------QPKEASVHPVKSKAPKEEALSNVPILRYVPLSRRKKGESPFTECSG 550
                         +  EAS    KS    +E  SN  ILRYVPLSRRKKGESPF E   
Sbjct: 664 ASKEPHISIGTFHSEKSEASTSTAKSVILMDEKTSNPSILRYVPLSRRKKGESPFVESPQ 723

Query: 551 ILKVGDVEILKENFTTPLTTITKQEIQESKTDRTKVILPERRTKAGFDPNAYKLLEKAGY 610
            LKVGD+E+LKE+FTTPLT ITKQEI   K D T+  LP+RRTK  FDP AYKL+ KAGY
Sbjct: 724 GLKVGDIEVLKESFTTPLTKITKQEI---KIDLTEASLPQRRTKDEFDPKAYKLMAKAGY 783

Query: 611 DFTTHTEFKSLKIFDGRSELSPTQKKLQKEGYAIPSSRAGLGYNPLVPVRITRKW--KVA 620
           DFTTHTEFKSLKI + + +LS TQKKL +EG+AIP SR GLGY    P+RITRK   K+ 
Sbjct: 784 DFTTHTEFKSLKIHE-QPKLSSTQKKLLREGHAIPMSRKGLGYKLPEPIRITRKGKEKMV 843

[Close]

BLAST of Spg008516 vs. NCBI nr
Match: KAA0061113.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK03782.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 255.0 bits (650), Expect = 1.7e-63
Identity = 221/665 (33.23%), Postives = 322/665 (48.42%), Query Frame = 0


Query: 4   STNLHELELEISSPASVLKEFIADGLLEAKTFEAKEIQTESEKPEPRAFSQGLESSEVRE 63
           +T  H++EL I+S  +             K F   +++   +K E ++ ++ +  S V+E
Sbjct: 322 ATRAHDMELSIASRGT-------------KDFPVPKVR--KDKKETKS-AEKVVKSTVKE 381

Query: 64  SREFKRSKIQNSRSKETQHEDSQTPVIANKMLRRMTESAQLEIATAENLMLGKFISSSQQ 123
           S     + ++ S+ KE + E      IA+ ML ++ E   +++   +          S+Q
Sbjct: 382 SMVVNTTPLKFSKRKEGRAEKKDDGNIAD-MLEQLLEKQLIQLPECKR---------SEQ 441

Query: 124 PSETSSPDMMSVMITDAGTSEERMAEVEKKISMLLKMVEEKDQEIASLRNQMESRDVAES 183
                 P+        +   E+     E    ++L++  EK  ++          D+ E 
Sbjct: 442 AGNVDDPNYCKYHRVISHPVEKYFVLKE----LILRLAREKKIKL----------DLEEE 501

Query: 184 KSSSDIFQDQLESVENEDEGWTLVTRRKKQKKHFVQKKSHMFRNYRRKNMSQKQKRKTKG 243
            +  D  Q++   +E +DEGWT+VTRRKK+K   +QK+S ++ NYRR N +QK K+K K 
Sbjct: 502 VTPED-SQEKERLIEEDDEGWTVVTRRKKRKSTLIQKESRLYINYRRGNKTQKNKKKKK- 561

Query: 244 LRKPKLVVEENQDFVLSRHPITLKDFFPKNFINDDHEDIPEIVA---------------- 303
            RK KLV E+++DF  ++  +TL DFFP  F+ D  ++ P +VA                
Sbjct: 562 TRKLKLVHEKDKDFPRTQRVVTLADFFPTRFLGDHQDENPGVVASASSSSAPIATYESTP 621

Query: 304 -CHAVNAFEEG--------NSSSSLSQNAKKESIEEV-----DACEVQPK---------- 363
            C +++  +E         N    +S   +++ +E +      A  + PK          
Sbjct: 622 YCMSIDFSDEDLLLGSKLHNRPLYVSGYVQEQRVERILVDNGSAVNIMPKSTMRQLGILM 681

Query: 364 ------------------------------------------------------------ 423
                                                                       
Sbjct: 682 EELSNSKLVIQGFNQGSQRVIDAKFYLKNDGSPEVVSVEVPLVNKEDNLQLKSLASRESH 741

Query: 424 -----------EASVHPVKSKAPKEEALSNVPILRYVPLSRRKKGESPFTECSGILKVGD 483
                      EAS    KS    +E  SN PILRYVPLSRRKKGESPF E    LKVGD
Sbjct: 742 KSTGTFHSGKSEASTSTAKSVIVMDEKTSNPPILRYVPLSRRKKGESPFVEFPQGLKVGD 801

Query: 484 VEILKENFTTPLTTITKQEIQESKTDRTKVILPERRTKAGFDPNAYKLLEKAGYDFTTHT 543
           +E+LKE+FTTPLT ITKQEI   K D  +  LP+RRTK GFDP AYK + KAGYDFTTHT
Sbjct: 802 IEVLKESFTTPLTKITKQEI---KIDLIEASLPQRRTKDGFDPKAYKSMAKAGYDFTTHT 861

Query: 544 EFKSLKIFDGRSELSPTQKKLQKEGYAIPSSRAGLGYNPLVPVRITRKW--KVADAHHIT 556
           EFKSLKI + + +LS TQKKL +EG+AIP SR GLGY P  P+RITRK   KV D++HIT
Sbjct: 862 EFKSLKIHE-QPKLSSTQKKLLREGHAIPMSRKGLGYKPPEPIRITRKGKEKVVDSNHIT 921

[Close]

BLAST of Spg008516 vs. NCBI nr
Match: TYJ98225.1 (uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa])

HSP 1 Score: 253.4 bits (646), Expect = 5.1e-63
Identity = 164/356 (46.07%), Postives = 205/356 (57.58%), Query Frame = 0


Query: 280  EDIPEIVACHAVNAFEEGNSSSSLSQNAKKESIEEVDACEVQPKEASVHPVKSKAPKEEA 339
            ED+ EI++        +G   +       K+S  + DA   Q         K +AP+ E 
Sbjct: 861  EDVSEIISTEV--PVTKGTFKNEQEMITSKKS-SKGDALNSQQNGELTTETKLRAPEAEK 920

Query: 340  L-------SNVPILRYVPLSRRKKGESPFTECSGILKVGDVEILKENFTTPLTTITKQEI 399
            +       SN P+LRY+PLSRRKKGESPFTECS  L V + EILKENFT PLT I K E 
Sbjct: 921  IATLQKEVSNPPVLRYIPLSRRKKGESPFTECSKNLTVKNTEILKENFTAPLTKIEKGEA 980

Query: 400  QESKTDRTKVILPERRTKAGFDPNAYKLLEKAGYDFTTHTEFKSLKIFDGRSELSPTQKK 459
            ++ +    +  LPERRT  GFDP AYKL+ KAGYDFTT TE KS+KIFD R ELSPTQKK
Sbjct: 981  KKIEKKDLQAYLPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKK 1040

Query: 460  LQKEGYAIPSSRAGLGYNPLVPVRITRKW--KVADAHHITIEEMCDPEDKKNDDSQKISV 519
            LQK+GY+IP+SRAG+GY    PVRIT K   KVA+  HIT+EE  D E+ K   SQ+ SV
Sbjct: 1041 LQKQGYSIPNSRAGIGYQSSEPVRITGKGKAKVANTCHITVEESKDSEEGKKVRSQRSSV 1100

Query: 520  FDPIKAPTTRLSVHQRLKYSSSEKEGQGKTSVPTRRSVFHRLSVSTSK-----KVDEPLR 579
            FD I     R SV QR+  S ++   Q  T   TR S F RL+ S  K           +
Sbjct: 1101 FDRIAFSAIRPSVFQRVSTSIAKDSNQVSTCSSTRLSAFQRLNTSAKKVRSISPTPTTRK 1160

Query: 580  SVFDRLQATNGQCKGKLKSLETEESDEMNDNNGFSSTVPSRMKRKPFVLINTEESV 622
            S F RL  +  + + K     + +S  +  +    S  PSRMKRK FV +NTE S+
Sbjct: 1161 SAFKRLSVSVTRDQKKASMSVSNKSSLVTGDEEIRSAFPSRMKRKMFVSVNTEGSL 1213

[Close]

BLAST of Spg008516 vs. NCBI nr
Match: TYJ98225.1 (uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa])

HSP 1 Score: 67.8 bits (164), Expect = 4.0e-07
Identity = 47/117 (40.17%), Postives = 74/117 (63.25%), Query Frame = 0


Query: 75  SRSKETQHEDSQTPV-IANKMLRRMTESAQLEIATAENLMLGKFISSSQQPS-ETSSPDM 134
           SRS+E Q  +   P  +A  + +++++  +  I   EN  + +  S S++ + E   P++
Sbjct: 22  SRSREIQSSEDMPPFEVAKNIWKQISKPPKGGIVIKENPAIDEHNSLSERSNEEVPQPNI 81

Query: 135 MSVMITDAGTSEERMAEVEKKISMLLKMVEEKDQEIASLRNQMESRDVAESKSSSDI 190
           MSVM+TD  TSE+RM  +EKK++M +K VEE+D EIA L+N +ESRD AES  +  I
Sbjct: 82  MSVMVTDVDTSEDRMVVLEKKVNMHMKAVEERDFEIALLKNHIESRDAAESSHTHTI 138

HSP 2 Score: 253.4 bits (646), Expect = 5.1e-63
Identity = 164/356 (46.07%), Postives = 205/356 (57.58%), Query Frame = 0


Query: 280  EDIPEIVACHAVNAFEEGNSSSSLSQNAKKESIEEVDACEVQPKEASVHPVKSKAPKEEA 339
            ED+ EI++        +G   +       K+S  + DA   Q         K +AP+ E 
Sbjct: 883  EDVSEIISTEV--PVTKGTFKNEQEMITSKKS-SKGDALNSQQNGELTTETKLRAPEAEK 942

Query: 340  L-------SNVPILRYVPLSRRKKGESPFTECSGILKVGDVEILKENFTTPLTTITKQEI 399
            +       SN P+LRY+PLSRRKKGESPFTECS  L V + EILKENFT PLT I K E 
Sbjct: 943  IATLQKEVSNPPVLRYIPLSRRKKGESPFTECSKNLTVKNTEILKENFTAPLTKIEKGEA 1002

Query: 400  QESKTDRTKVILPERRTKAGFDPNAYKLLEKAGYDFTTHTEFKSLKIFDGRSELSPTQKK 459
            ++ +    +  LPERRT  GFDP AYKL+ KAGYDFTT TE KS+KIFD R ELSPTQKK
Sbjct: 1003 KKIEKKDLQAYLPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKK 1062

Query: 460  LQKEGYAIPSSRAGLGYNPLVPVRITRKW--KVADAHHITIEEMCDPEDKKNDDSQKISV 519
            LQK+GY+IP+SRAG+GY    PVRIT K   KVA+  HIT+EE  D E+ K   SQ+ SV
Sbjct: 1063 LQKQGYSIPNSRAGIGYQSSEPVRITGKGKAKVANTCHITVEESKDSEEGKKVRSQRSSV 1122

Query: 520  FDPIKAPTTRLSVHQRLKYSSSEKEGQGKTSVPTRRSVFHRLSVSTSK-----KVDEPLR 579
            FD I     R SV QR+  S ++   Q  T   TR S F RL+ S  K           +
Sbjct: 1123 FDRIAFSAIRPSVFQRVSTSIAKDSNQVSTCSSTRLSAFQRLNTSAKKVRSISPTPTTRK 1182

Query: 580  SVFDRLQATNGQCKGKLKSLETEESDEMNDNNGFSSTVPSRMKRKPFVLINTEESV 622
            S F RL  +  + + K     + +S  +  +    S  PSRMKRK FV +NTE S+
Sbjct: 1183 SAFKRLSVSVTRDQKKASMSVSNKSSLVTGDEEIRSAFPSRMKRKMFVSVNTEGSL 1235

[Close]

BLAST of Spg008516 vs. NCBI nr
Match: KAA0047477.1 (uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa])

HSP 1 Score: 73.9 bits (180), Expect = 5.5e-09
Identity = 50/117 (42.74%), Postives = 76/117 (64.96%), Query Frame = 0


Query: 75  SRSKETQHEDSQTPV-IANKMLRRMTESAQLEIATAENLMLGKFISSSQQPS-ETSSPDM 134
           SRS+E Q  +   P  +A  +  ++++  +  I   EN  + +  S S++ + E   P++
Sbjct: 22  SRSREIQSSEDMPPFDVAKNIWEQISKPPKGGIVIKENPAMDEHNSLSERSNEEVPQPNI 81

Query: 135 MSVMITDAGTSEERMAEVEKKISMLLKMVEEKDQEIASLRNQMESRDVAESKSSSDI 190
           MSVM+TD  TSE+RMAE+EKK++ML+K VEE+D EIA L+N +ESRD AES  +  I
Sbjct: 82  MSVMVTDVDTSEDRMAELEKKVNMLMKAVEERDFEIALLKNHIESRDAAESSHTHTI 138

HSP 2 Score: 253.4 bits (646), Expect = 5.1e-63
Identity = 164/356 (46.07%), Postives = 205/356 (57.58%), Query Frame = 0


Query: 280  EDIPEIVACHAVNAFEEGNSSSSLSQNAKKESIEEVDACEVQPKEASVHPVKSKAPKEEA 339
            ED+ EI++        +G   +       K+S  + DA   Q         K +AP+ E 
Sbjct: 813  EDVSEIISTEV--PVTKGTFKNEQEMITSKKS-SKGDALNSQQNGELTTETKLRAPEAEK 872

Query: 340  L-------SNVPILRYVPLSRRKKGESPFTECSGILKVGDVEILKENFTTPLTTITKQEI 399
            +       SN P+LRY+PLSRRKKGESPFTECS  L V + EILKENFT PLT I K E 
Sbjct: 873  IATLQKEVSNPPVLRYIPLSRRKKGESPFTECSKNLTVKNTEILKENFTAPLTKIEKGEA 932

Query: 400  QESKTDRTKVILPERRTKAGFDPNAYKLLEKAGYDFTTHTEFKSLKIFDGRSELSPTQKK 459
            ++ +    +  LPERRT  GFDP AYKL+ KAGYDFTT TE KS+KIFD R ELSPTQKK
Sbjct: 933  KKIEKKDLQAYLPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKK 992

Query: 460  LQKEGYAIPSSRAGLGYNPLVPVRITRKW--KVADAHHITIEEMCDPEDKKNDDSQKISV 519
            LQK+GY+IP+SRAG+GY    PVRIT K   KVA+  HIT+EE  D E+ K   SQ+ SV
Sbjct: 993  LQKQGYSIPNSRAGIGYQSSEPVRITGKGKAKVANTCHITVEESKDSEEGKKVRSQRSSV 1052

Query: 520  FDPIKAPTTRLSVHQRLKYSSSEKEGQGKTSVPTRRSVFHRLSVSTSK-----KVDEPLR 579
            FD I     R SV QR+  S ++   Q  T   TR S F RL+ S  K           +
Sbjct: 1053 FDRIAFSAIRPSVFQRVSTSIAKDSNQVSTCSSTRLSAFQRLNTSAKKVRSISPTPTTRK 1112

Query: 580  SVFDRLQATNGQCKGKLKSLETEESDEMNDNNGFSSTVPSRMKRKPFVLINTEESV 622
            S F RL  +  + + K     + +S  +  +    S  PSRMKRK FV +NTE S+
Sbjct: 1113 SAFKRLSVSVTRDQKKASMSVSNKSSLVTGDEEIRSAFPSRMKRKMFVSVNTEGSL 1165

[Close]

BLAST of Spg008516 vs. ExPASy TrEMBL
Match: A0A5D3C0W6 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G002360 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 2.6e-65
Identity = 214/640 (33.44%), Postives = 279/640 (43.59%), Query Frame = 0


Query: 191 QDQLESVENEDEGWTLVTRRKKQKKHFVQKKSHMFRNYRRKNMSQKQKRKTKGLRKPKLV 250
           Q++   +E +DE WT+VTRRKK+K   +QK+   +RNYRR N +QK K+K K  RK KL+
Sbjct: 364 QEKERLIEEDDERWTIVTRRKKRKSTPIQKEHRFYRNYRRWNKAQKNKKKKK-TRKLKLM 423

Query: 251 VEENQDFVLSRHPITLKDFFPKNFINDDHEDIPEIVACHAVNAFEEG------------- 310
            +E++DF  ++  ITL DFFP  F+ D  ++ P +VACHA+NA EE              
Sbjct: 424 HKEDKDFPRTQRLITLADFFPTRFLGDHQDENPGVVACHAINATEEESIPLRSLEEEKVS 483

Query: 311 ---------------------------NSSSSLSQNA----------------------- 370
                                      NS++S S  +                       
Sbjct: 484 KDLSRFNVDDLLSLPQEIKTILINALLNSAASSSSASTVTYESTPYCMSIDFSNDDLLLG 543

Query: 371 ------------------------------------------------------------ 430
                                                                       
Sbjct: 544 SKLHNRPLYVSGYVREQRVDRILVDNGSAVNIMPKSTIRQLGILMKELSNSKLVIQGFNQ 603

Query: 431 ---------------------------------KKESIEEVDACEV-------------- 490
                                            K +S  EV + EV              
Sbjct: 604 GSQRVIDGVKKVEADSNPFSEAESHFADAKFYLKNDSSPEVVSVEVPLVNREDNLQLKSL 663

Query: 491 --------------QPKEASVHPVKSKAPKEEALSNVPILRYVPLSRRKKGESPFTECSG 550
                         +  EAS    KS    +E  SN  ILRYVPLSRRKKGESPF E   
Sbjct: 664 ASKEPHISIGTFHSEKSEASTSTAKSVILMDEKTSNPSILRYVPLSRRKKGESPFVESPQ 723

Query: 551 ILKVGDVEILKENFTTPLTTITKQEIQESKTDRTKVILPERRTKAGFDPNAYKLLEKAGY 610
            LKVGD+E+LKE+FTTPLT ITKQEI   K D T+  LP+RRTK  FDP AYKL+ KAGY
Sbjct: 724 GLKVGDIEVLKESFTTPLTKITKQEI---KIDLTEASLPQRRTKDEFDPKAYKLMAKAGY 783

Query: 611 DFTTHTEFKSLKIFDGRSELSPTQKKLQKEGYAIPSSRAGLGYNPLVPVRITRKW--KVA 620
           DFTTHTEFKSLKI + + +LS TQKKL +EG+AIP SR GLGY    P+RITRK   K+ 
Sbjct: 784 DFTTHTEFKSLKIHE-QPKLSSTQKKLLREGHAIPMSRKGLGYKLPEPIRITRKGKEKMV 843

[Close]

BLAST of Spg008516 vs. ExPASy TrEMBL
Match: A0A5D3BY54 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G001700 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 8.5e-64
Identity = 221/665 (33.23%), Postives = 322/665 (48.42%), Query Frame = 0


Query: 4   STNLHELELEISSPASVLKEFIADGLLEAKTFEAKEIQTESEKPEPRAFSQGLESSEVRE 63
           +T  H++EL I+S  +             K F   +++   +K E ++ ++ +  S V+E
Sbjct: 322 ATRAHDMELSIASRGT-------------KDFPVPKVR--KDKKETKS-AEKVVKSTVKE 381

Query: 64  SREFKRSKIQNSRSKETQHEDSQTPVIANKMLRRMTESAQLEIATAENLMLGKFISSSQQ 123
           S     + ++ S+ KE + E      IA+ ML ++ E   +++   +          S+Q
Sbjct: 382 SMVVNTTPLKFSKRKEGRAEKKDDGNIAD-MLEQLLEKQLIQLPECKR---------SEQ 441

Query: 124 PSETSSPDMMSVMITDAGTSEERMAEVEKKISMLLKMVEEKDQEIASLRNQMESRDVAES 183
                 P+        +   E+     E    ++L++  EK  ++          D+ E 
Sbjct: 442 AGNVDDPNYCKYHRVISHPVEKYFVLKE----LILRLAREKKIKL----------DLEEE 501

Query: 184 KSSSDIFQDQLESVENEDEGWTLVTRRKKQKKHFVQKKSHMFRNYRRKNMSQKQKRKTKG 243
            +  D  Q++   +E +DEGWT+VTRRKK+K   +QK+S ++ NYRR N +QK K+K K 
Sbjct: 502 VTPED-SQEKERLIEEDDEGWTVVTRRKKRKSTLIQKESRLYINYRRGNKTQKNKKKKK- 561

Query: 244 LRKPKLVVEENQDFVLSRHPITLKDFFPKNFINDDHEDIPEIVA---------------- 303
            RK KLV E+++DF  ++  +TL DFFP  F+ D  ++ P +VA                
Sbjct: 562 TRKLKLVHEKDKDFPRTQRVVTLADFFPTRFLGDHQDENPGVVASASSSSAPIATYESTP 621

Query: 304 -CHAVNAFEEG--------NSSSSLSQNAKKESIEEV-----DACEVQPK---------- 363
            C +++  +E         N    +S   +++ +E +      A  + PK          
Sbjct: 622 YCMSIDFSDEDLLLGSKLHNRPLYVSGYVQEQRVERILVDNGSAVNIMPKSTMRQLGILM 681

Query: 364 ------------------------------------------------------------ 423
                                                                       
Sbjct: 682 EELSNSKLVIQGFNQGSQRVIDAKFYLKNDGSPEVVSVEVPLVNKEDNLQLKSLASRESH 741

Query: 424 -----------EASVHPVKSKAPKEEALSNVPILRYVPLSRRKKGESPFTECSGILKVGD 483
                      EAS    KS    +E  SN PILRYVPLSRRKKGESPF E    LKVGD
Sbjct: 742 KSTGTFHSGKSEASTSTAKSVIVMDEKTSNPPILRYVPLSRRKKGESPFVEFPQGLKVGD 801

Query: 484 VEILKENFTTPLTTITKQEIQESKTDRTKVILPERRTKAGFDPNAYKLLEKAGYDFTTHT 543
           +E+LKE+FTTPLT ITKQEI   K D  +  LP+RRTK GFDP AYK + KAGYDFTTHT
Sbjct: 802 IEVLKESFTTPLTKITKQEI---KIDLIEASLPQRRTKDGFDPKAYKSMAKAGYDFTTHT 861

Query: 544 EFKSLKIFDGRSELSPTQKKLQKEGYAIPSSRAGLGYNPLVPVRITRKW--KVADAHHIT 556
           EFKSLKI + + +LS TQKKL +EG+AIP SR GLGY P  P+RITRK   KV D++HIT
Sbjct: 862 EFKSLKIHE-QPKLSSTQKKLLREGHAIPMSRKGLGYKPPEPIRITRKGKEKVVDSNHIT 921

[Close]

BLAST of Spg008516 vs. ExPASy TrEMBL
Match: A0A5A7TZU9 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 2.5e-63
Identity = 164/356 (46.07%), Postives = 205/356 (57.58%), Query Frame = 0


Query: 280  EDIPEIVACHAVNAFEEGNSSSSLSQNAKKESIEEVDACEVQPKEASVHPVKSKAPKEEA 339
            ED+ EI++        +G   +       K+S  + DA   Q         K +AP+ E 
Sbjct: 883  EDVSEIISTEV--PVTKGTFKNEQEMITSKKS-SKGDALNSQQNGELTTETKLRAPEAEK 942

Query: 340  L-------SNVPILRYVPLSRRKKGESPFTECSGILKVGDVEILKENFTTPLTTITKQEI 399
            +       SN P+LRY+PLSRRKKGESPFTECS  L V + EILKENFT PLT I K E 
Sbjct: 943  IATLQKEVSNPPVLRYIPLSRRKKGESPFTECSKNLTVKNTEILKENFTAPLTKIEKGEA 1002

Query: 400  QESKTDRTKVILPERRTKAGFDPNAYKLLEKAGYDFTTHTEFKSLKIFDGRSELSPTQKK 459
            ++ +    +  LPERRT  GFDP AYKL+ KAGYDFTT TE KS+KIFD R ELSPTQKK
Sbjct: 1003 KKIEKKDLQAYLPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKK 1062

Query: 460  LQKEGYAIPSSRAGLGYNPLVPVRITRKW--KVADAHHITIEEMCDPEDKKNDDSQKISV 519
            LQK+GY+IP+SRAG+GY    PVRIT K   KVA+  HIT+EE  D E+ K   SQ+ SV
Sbjct: 1063 LQKQGYSIPNSRAGIGYQSSEPVRITGKGKAKVANTCHITVEESKDSEEGKKVRSQRSSV 1122

Query: 520  FDPIKAPTTRLSVHQRLKYSSSEKEGQGKTSVPTRRSVFHRLSVSTSK-----KVDEPLR 579
            FD I     R SV QR+  S ++   Q  T   TR S F RL+ S  K           +
Sbjct: 1123 FDRIAFSAIRPSVFQRVSTSIAKDSNQVSTCSSTRLSAFQRLNTSAKKVRSISPTPTTRK 1182

Query: 580  SVFDRLQATNGQCKGKLKSLETEESDEMNDNNGFSSTVPSRMKRKPFVLINTEESV 622
            S F RL  +  + + K     + +S  +  +    S  PSRMKRK FV +NTE S+
Sbjct: 1183 SAFKRLSVSVTRDQKKASMSVSNKSSLVTGDEEIRSAFPSRMKRKMFVSVNTEGSL 1235

[Close]

BLAST of Spg008516 vs. ExPASy TrEMBL
Match: A0A5A7TZU9 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.7e-09
Identity = 50/117 (42.74%), Postives = 76/117 (64.96%), Query Frame = 0


Query: 75  SRSKETQHEDSQTPV-IANKMLRRMTESAQLEIATAENLMLGKFISSSQQPS-ETSSPDM 134
           SRS+E Q  +   P  +A  +  ++++  +  I   EN  + +  S S++ + E   P++
Sbjct: 22  SRSREIQSSEDMPPFDVAKNIWEQISKPPKGGIVIKENPAMDEHNSLSERSNEEVPQPNI 81

Query: 135 MSVMITDAGTSEERMAEVEKKISMLLKMVEEKDQEIASLRNQMESRDVAESKSSSDI 190
           MSVM+TD  TSE+RMAE+EKK++ML+K VEE+D EIA L+N +ESRD AES  +  I
Sbjct: 82  MSVMVTDVDTSEDRMAELEKKVNMLMKAVEERDFEIALLKNHIESRDAAESSHTHTI 138

HSP 2 Score: 253.4 bits (646), Expect = 2.5e-63
Identity = 164/356 (46.07%), Postives = 205/356 (57.58%), Query Frame = 0


Query: 280  EDIPEIVACHAVNAFEEGNSSSSLSQNAKKESIEEVDACEVQPKEASVHPVKSKAPKEEA 339
            ED+ EI++        +G   +       K+S  + DA   Q         K +AP+ E 
Sbjct: 861  EDVSEIISTEV--PVTKGTFKNEQEMITSKKS-SKGDALNSQQNGELTTETKLRAPEAEK 920

Query: 340  L-------SNVPILRYVPLSRRKKGESPFTECSGILKVGDVEILKENFTTPLTTITKQEI 399
            +       SN P+LRY+PLSRRKKGESPFTECS  L V + EILKENFT PLT I K E 
Sbjct: 921  IATLQKEVSNPPVLRYIPLSRRKKGESPFTECSKNLTVKNTEILKENFTAPLTKIEKGEA 980

Query: 400  QESKTDRTKVILPERRTKAGFDPNAYKLLEKAGYDFTTHTEFKSLKIFDGRSELSPTQKK 459
            ++ +    +  LPERRT  GFDP AYKL+ KAGYDFTT TE KS+KIFD R ELSPTQKK
Sbjct: 981  KKIEKKDLQAYLPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKK 1040

Query: 460  LQKEGYAIPSSRAGLGYNPLVPVRITRKW--KVADAHHITIEEMCDPEDKKNDDSQKISV 519
            LQK+GY+IP+SRAG+GY    PVRIT K   KVA+  HIT+EE  D E+ K   SQ+ SV
Sbjct: 1041 LQKQGYSIPNSRAGIGYQSSEPVRITGKGKAKVANTCHITVEESKDSEEGKKVRSQRSSV 1100

Query: 520  FDPIKAPTTRLSVHQRLKYSSSEKEGQGKTSVPTRRSVFHRLSVSTSK-----KVDEPLR 579
            FD I     R SV QR+  S ++   Q  T   TR S F RL+ S  K           +
Sbjct: 1101 FDRIAFSAIRPSVFQRVSTSIAKDSNQVSTCSSTRLSAFQRLNTSAKKVRSISPTPTTRK 1160

Query: 580  SVFDRLQATNGQCKGKLKSLETEESDEMNDNNGFSSTVPSRMKRKPFVLINTEESV 622
            S F RL  +  + + K     + +S  +  +    S  PSRMKRK FV +NTE S+
Sbjct: 1161 SAFKRLSVSVTRDQKKASMSVSNKSSLVTGDEEIRSAFPSRMKRKMFVSVNTEGSL 1213

[Close]

BLAST of Spg008516 vs. ExPASy TrEMBL
Match: A0A5D3BIH8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G001270 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.9e-07
Identity = 47/117 (40.17%), Postives = 74/117 (63.25%), Query Frame = 0


Query: 75  SRSKETQHEDSQTPV-IANKMLRRMTESAQLEIATAENLMLGKFISSSQQPS-ETSSPDM 134
           SRS+E Q  +   P  +A  + +++++  +  I   EN  + +  S S++ + E   P++
Sbjct: 22  SRSREIQSSEDMPPFEVAKNIWKQISKPPKGGIVIKENPAIDEHNSLSERSNEEVPQPNI 81

Query: 135 MSVMITDAGTSEERMAEVEKKISMLLKMVEEKDQEIASLRNQMESRDVAESKSSSDI 190
           MSVM+TD  TSE+RM  +EKK++M +K VEE+D EIA L+N +ESRD AES  +  I
Sbjct: 82  MSVMVTDVDTSEDRMVVLEKKVNMHMKAVEERDFEIALLKNHIESRDAAESSHTHTI 138

HSP 2 Score: 253.4 bits (646), Expect = 2.5e-63
Identity = 164/356 (46.07%), Postives = 205/356 (57.58%), Query Frame = 0


Query: 280  EDIPEIVACHAVNAFEEGNSSSSLSQNAKKESIEEVDACEVQPKEASVHPVKSKAPKEEA 339
            ED+ EI++        +G   +       K+S  + DA   Q         K +AP+ E 
Sbjct: 813  EDVSEIISTEV--PVTKGTFKNEQEMITSKKS-SKGDALNSQQNGELTTETKLRAPEAEK 872

Query: 340  L-------SNVPILRYVPLSRRKKGESPFTECSGILKVGDVEILKENFTTPLTTITKQEI 399
            +       SN P+LRY+PLSRRKKGESPFTECS  L V + EILKENFT PLT I K E 
Sbjct: 873  IATLQKEVSNPPVLRYIPLSRRKKGESPFTECSKNLTVKNTEILKENFTAPLTKIEKGEA 932

Query: 400  QESKTDRTKVILPERRTKAGFDPNAYKLLEKAGYDFTTHTEFKSLKIFDGRSELSPTQKK 459
            ++ +    +  LPERRT  GFDP AYKL+ KAGYDFTT TE KS+KIFD R ELSPTQKK
Sbjct: 933  KKIEKKDLQAYLPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKK 992

Query: 460  LQKEGYAIPSSRAGLGYNPLVPVRITRKW--KVADAHHITIEEMCDPEDKKNDDSQKISV 519
            LQK+GY+IP+SRAG+GY    PVRIT K   KVA+  HIT+EE  D E+ K   SQ+ SV
Sbjct: 993  LQKQGYSIPNSRAGIGYQSSEPVRITGKGKAKVANTCHITVEESKDSEEGKKVRSQRSSV 1052

Query: 520  FDPIKAPTTRLSVHQRLKYSSSEKEGQGKTSVPTRRSVFHRLSVSTSK-----KVDEPLR 579
            FD I     R SV QR+  S ++   Q  T   TR S F RL+ S  K           +
Sbjct: 1053 FDRIAFSAIRPSVFQRVSTSIAKDSNQVSTCSSTRLSAFQRLNTSAKKVRSISPTPTTRK 1112

Query: 580  SVFDRLQATNGQCKGKLKSLETEESDEMNDNNGFSSTVPSRMKRKPFVLINTEESV 622
            S F RL  +  + + K     + +S  +  +    S  PSRMKRK FV +NTE S+
Sbjct: 1113 SAFKRLSVSVTRDQKKASMSVSNKSSLVTGDEEIRSAFPSRMKRKMFVSVNTEGSL 1165

The following BLAST results are available for this feature:

BLAST of Spg008516 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK05005.1	5.4e-65	33.44	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0061113.1	1.7e-63	33.23	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK03782.1 ty3-gyp...	[more]
TYJ98225.1	5.1e-63	46.07	uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa]	[more]
TYJ98225.1	4.0e-07	40.17	uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa]	[more]
KAA0047477.1	5.5e-09	42.74	uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]	[more]

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BLAST of Spg008516 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg008516 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C0W6	2.6e-65	33.44	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3BY54	8.5e-64	33.23	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7TZU9	2.5e-63	46.07	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940...	[more]
A0A5A7TZU9	2.7e-09	42.74	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940...	[more]
A0A5D3BIH8	1.9e-07	40.17	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

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BLAST of Spg008516 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 147..174
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 585..604
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 524..545

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg008516.1	Spg008516.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090304	nucleic acid metabolic process