Spg008429 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg008429
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Pre-mRNA-splicing factor 38
Location	scaffold10: 33465093 .. 33474555 (-)
RNA-Seq Expression	Spg008429
Synteny	Spg008429

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAAACCCAATCATCTTCACTGACCGTCGCCGGTTGGGAGCATCGTTATAAAAGCCCTAACGAGCGTCTTCAAAGTCCTTTCCTTCGGTTCGTACGGCAAGATTTCCTCTCTTTGCCGTCTTTCCCTTTTCCGTTCGACTTCAGACAATTTTAACTTCAGGTTAGGGCTTTTCTCTTCCCGCTCTCTCCACAGTTCCGCTGCTTGATTTCATTTCCCGCCGGTATGTGTTTCTTGCGATTGGGTTTTGCATCTTTTGGGTTTATCGTTTTGGAGATTGTCAATCGAATTTTGAATCCGGGTACTTCGAAGATTGTTTATATCTGGGGTCAAGTAGGCTTGGTCCATAGAATTGAAGGAACTTTAGCAATTGGCTTCGTGATGGGGATTTCTATTTTCAAGCTTTCGCCTCTTCCTACTTTTTTTTTTATTTATTTTTTTTTTAATTTTTACTTTGATTATTAATTTGGTAATCCGACGGTGCATTGTACTCATAGTCGTTTGAAATCCTGCACTTATCATCTTAGATTGGTTTTTAGCCTTGTGGCATCATTGTTTTACTTCTTCTTTAGTCGTTTAAAGATTTGAAACTCCTTTTTTTGGTTATGATTTTACTAAATACTGGGCCAGGAGGTGGATTGTTGTTGAAAGATTCAGTGTTGCCGTACAGTCGGGAACTTGTCTTGGGAGTGTGTGCCTGTGGAGGCAAATTCAATTACTTAAGTTGTTGAAATTGAACATGGGAATATTGTAGCGGAAGTAGAAGGCTTTTCTGCTTTATAATCTTATAGCTGCTTGTAATATGGAGAACCTAAAAGTCAAAACAAGAAAGTGAATGAAGGAAGCCCATCAGTTCAATGTCACTTGTGGAAATGAGACATATTCTTTTGTAGGTGTCTTTCGTTGTTGGTTCCTTCTTTAGAATCTTTTTGTATGCAGACTATGTACGGTTCTTATATGCTATCAGATGAGAGTGACTGCAATTTGTGTTTTTCTTCACCAGACCATTTTTAGACTTGCTGTTAAAAGTATCATTTTATTATCTTTTAATTTCTGAATTTGTAATGTAGTTGTATATTCTTGTCCCTGCAGGTAGATGTCTAGTTGATAACCCATAAATGGAGATAAAGACTTGCGGGAAGCCAATTGATTCTTTGCTGGAGAAGGTTCTATGTATGAATATTCTGTCTTCTGATTACTTTAAGGAGCTTTATCGTTTGAAGACATACCATGAAGTGGTCGATGAAATTTATAACCAAGTTGATCATGTCGAGCCATGGATGACTGGGAACTGCCGTGGTCCTTCAACAGCATTCTGCCTTCTGTACAAGTTTTTCACCATGAAGCTTACGGTGAAGCAAATGCATGGGCTGTTAAAGCACGAGGATTCTCCTTACATCAGAGCGGTAGGTAGAATCCTTTTGACCTTTAATTATCATATTTTATAACAAATTGACATAATATATTGTTGGTATCATTTATGTCATGTTACCATTAACTGTTGTTTATACTCGCTTTGTGGATTTCATATTACTTATTTTTTTTTTTGGTAAATAGTATAATGGAAATGACCATTGCCCTTCACCGCCCCTTTTTTCTTTCTTTTTTCCTCTTCTTATTCTTTCTTCTCCTTCATTCCTTCTTCTCCTTCTTCTTCTCTTTCCTCTTCCTCCTTTTCTTCTCTTCTTTCACGTTTAGAAGAAACAAAAAAATATATAATGGACATGACAGCTTGCTCTATCGATTTTAAAAGAATTAATATTCTCCAATGTTGCATGTACTTTTACGATCTTTGTTGTGATTTGAAAAAAATATTAATATATTATATGTAGTTTGGAACTTTGATTAATAATGTACAAGTTGGATCAAATACAGCTGTTATTATTATTATTTTTATTATAACAAATCAAACTTTCATTAAGAAATATGTAAGGATGTACAAGGACATACAAAAAACAAGCCCCACCAATGAAAAGACCCTAAAAAACTAACTACAAGAAGGGGTCCCAATCCAGAAGAATGAGCCTCAACATGTAATTACATAAGGCTGGATTAGCAGACGCCCAGATCAAATATAGCTGTTGTAAATAGTTTAGTTTAATATGGTAATTTAGTTTATGTCACTGTAATGAGGATGGTCAGAGGTAGATTTTGAAGTGTATTCTTGAAGGTTTCTGTTTCCTGTAGCATGTAATTTTCTTGTGGGCATCTTAGAGCATAATTAAATTCTTTATCTTCTCAACATATTTACATTAAATGCATTTCGGCAAGATCTTTGTTGATAGTAGGTAGTGATCCATGGATCATTGAAGAATCTGCATTGCTATTTGTTTTTGTTTTGTTATTTTTTTTTTTGGTTATCTCTCAACTTTGGAGTGGTTAATGAATAAACATCTTATTTTTGTAGGAATTATGTCATTGTCACCTAGAAAAGACTACTATGCTAAACTAGTTTGCAGTTTGAAAATAGATTGGAGACTAGCTCTTGGTATATTGATACGTTTAGGTTGCTCTCTTTCTAAGTCCTACCTTTATTCCATCTTTTCAATTTTGTCCTTTATGGTCTGATGGTTCTGTTGTACAGAAACCAAATTGGTTCTGGACATAAACATGGCTCTTTATCTCTCTCCCTATATAGAAGGGAAAAACAGTCACTTGGCTGAAAATTTTCTTCTGCCATCAAGAATTCCCCAATTCCCTGTTAAGAAGATTACTAGAGAAGCTTTCCAACTATCACTAAACAGAATAATTACAAGATCTGAGCCAAAAAGCTTGATCCTTAACTATGAAATAAATCAAGTAATTATTTTCATGAGGTTTTCTACATTTTCCTTAAAATTTTTTGTAGGTTTTCTTAGAGAAGTGTCATTAACCGTCTGTATTATGCTGATTCTGTACTAAAATAGTCGAGTGTTGAGTAGTATTATGATGGGTCTAATTAAAAAATTAAGTTTCCTAAGTAGAAAAGCATTTTCAAGAAATGAAAAATTAATTATTTGAAAGAACAGCATCAAACATAAAATCTGAACTGCTGCTAAAATAATACTGAATGAAAATAGTATTTATGGAATGACTTACTATTAATCGAAGTTAACCCTAAGTTCGTGAAAATGATCAAGATCACTTTTTAAAGTGGTCAAAATCACCAATGCATATGCCCTGAGAGCTATTGTTTATCATGAATTTTAGAATGATGAAATTCCGTATGCAATAAGTTAGAATGGTTGACTACTTTTAAATTTCCACTTGAACAATTTCAACTTTTACTGTGAGAAGAAAAGTTCCTCTTTTTGGCTTGCAATCGTACTGCAGTCAGGCTCCCGTTCTCATTCAAATACACAATTTAAGCAAGTCTTCAATTAGGAACACAGGTCTCCTCTCTCTTTCTCTCTCTCTCAAAATTATTGTTCTGAGTTGATGATGTTTGTGCTTTTATTCGGATTGCGATTTATGAATGGACTTTATTGGGAATGTTGGTGAGAATTCCCCGACTGGAGTAGTGATTATTTAACACCCCCCTCCCCCCCCTCCCCCCATCACCACAAACACCACCATTTTCATGTTTTATTAGTGACTTTCTTATGGACGGAAAAGATGATATCAGAAATTCTTTTTGAAATCTTCTCTTACGCTTGTCTTTGGCCCTTTATGCTAGTTCCTGCAGATTATTGTATTTCTTTAGTTTTTAAAAACTGTCTGATTCATGCATATGCTTGGTAACATTCTTGCCTTGCTCACCAGATGTTATGAACAAAGGATGAGCCTTGTCACTTTGGGTAGCTGTGTCCTTTCTCACACTATAAATTAATAGTGCCTTTGGTTTGCTTTGCAGTTATCTAAGGTTTGAGGTGACCTTTTTTTTTTTTTTAAAGATACTGAGATTATTTCAATCTGTTGGGTTTAATTATCTGTATTTAATATTCATTGATTACAAATCGGTTTTTGTATGCCTATTGCATCTTCTTTCCATTTAATATTCTTAAGAAGGTCAAATTACATAAAAGAAATTAATGTGGTTACTTATATTCTTGCATGCCTCCTTTTCTTGATAATTTTCCTTCTTATCTTATAATATATGATGCCCTTAGTTGTCCGATGTTTTAGAAGCTATGGTCTAGCTGTATTATATAGATTTGGTTCTGCAATGATTTGATGTTATTTCTTAAATTAAAATTTCCAGATTGGATTCCTCTACTTGAGATACGTTGCAGATCCAAAGACTCTCTGGAATTGGTTTGAACCTTATGTCAAAGATGAAGAGGTATGTGATGCATATAGATGCTTGATTTTTTATTATTTATTTTTTTTTTTTATATCATTATGAGGAAAAGCAATACAGTTAGCATCCATGTGTTTGGCTTAGAATTTCCTTTAATGTGCCGTAAGTTATTTTCCGTCCTTTGTATCATTGTTTTCTGCTGCCTTCAGTGTAATTTTGTTGATAATTGATTAAGCATAGACCTATTTTCAATATTATTGAAAGTTCATATATGCTTGTGAAGCATGGTAGGTGATCAAATTTGAATTTGAGGCTGTTGATACTTTCTAATCCAGTAATTACTATGTGTTCTTTTAATTGATTTTGTACTGCAACCCCTCCTTTTGGAATGCGTTTATGTAACCCCCTCCTTTTGGAGGAAGGACACCTTGTCCCTTTGTCTGTTAGGCAATTTTGGCTGGATTGGTGGTGCTTTCTGTATGACGCGTTATCTCTTTCTTATCAAAGAAGAGAAAAAAAAGGATTTCCTACCGCAAGTCTAAGAAGTAGGAAAAGGAAAATTCCATTTGCTATAATAGCTCACAACATTCTGCCCCACTTGCATAGTAAACAACACATGCCCTAGTTGAATTCAGATCTTGTTCCTTCAATAGTGGAAGAGAGCACAAATACTGGGACTCCTTTCTTTTACTCCTCAGTAATTATTCAAATGGATCACTTTGTTTGTAGTAAAAGAAAGAGAAGTCGTTGACAGACATAGGACCTAGTTTTGTATTCTATTTTTCATTATGCTTGAGATCATTATAACATGTAGATGTGAAAGGTATATTTTTTTCGAAGCTGGAATTGTGATCTAACACCCACACGATAGGTTATGCTCTAAGGAAATTCAAAACTAGTATTAAAGCTTTTCCTAATTTAAAGATGGTCTATGTTTCCTCACAAAGCACACTTATTTTTTTTTTTTTTTATAGAAAAACCATCTTTCATTGAGAATAAATGAAAGAATACGAGGGCATACAAAAGCACACTTATTATTATTGTAGGCAATTACCGGGATGAGTTTTATTGGTCTCTTATTGGCGTTGATTCTTTTAAGATTGAGAGACTAAATTAATATTTGATATCTTCTTGGGCACTTTTGGTTTTGAACGAAGATTAGTGAATAAACCAGAGGGTTAAGCTTCCACCCTCCTTTTGAATTTATTTCTTTTCTTGGATTGGACAAAAATCTCCAAGAAATTCAAGAAGTTCAAGAAGATAAGAACACTAACCATCTGGTTACCTCCCTTGTGGAGCTGACTCCTAAATTTCAGATACCAAAGACAATTTTGGAAATTCAATATTCTCTTCGTGGGAATATATGTTGCATGTTTAAGAGGTTTGTGATCCCATCTTTTGGTCGGGCTAATTTCTTTCCACTCTTACTAATAAAACTGGCTCCAAGAGAGAAATGTTTGGCTCCCAAGTCCCAAAATTGGTGGGGACGACCAAGAGATTAAAGTCCCATCCTGTATGAAGAAGGATGTTATTGGTCAAGCTGTGTATATTATACTGTTATCCTGAAGATGGAAGGAGATATTTGGATGAAGTCTGCATGTGTAAAACAGGTTATCTTGATTTCGTATGTATCCCAGTGCCCATGATGCCAATTTTGCAGAGAGCTTTGACAGGAACACTGGTGCTTGGTCTTTTGGTTTCATATGGAACTTCAATGAAAAAGATAAAAGTTAATACCGGAAATTCAATTCAAACAAGACTCTTACAATGGCTTTTTATCCATTTAAGTGTGTATTACAATGGCAACTTATTGCTTTTCTATGTCTGATTGTATCTTAGGCATTTTTTTGAAGATATGGAAAGAGAAAAATAGATGGATTTCAAGGATAGGAATGGTATGGGTTAAGTGAGATTTGGAAGTACCCATTATTTGTCGTCTCCTTTTGGGCCTTTCCAGTGCACACCCTTTTCTGTGCCTATATTCTTTTATTGTTTATTCCAACAGTTTGGGGCTTTTGCTTTTAACCTCTATACGATCAAGCTTTTTTCAGAGGGTTTCTGGTCCGTCCATTTGTTATTTTGTAGTCTGCTTTTCCCATTCGAACAAACAACAGACAAAAAGGACTACTTCCTTAAAATTCCATGATGTTTTGCATGTTTTCATTTTTAATGGATTTAATTTAATAAGAACCTATTTTCAAAAAAAAAATAAATTAATAAGAACCTAAAGCTATAAATTGCAATAAAGGAACTAACAGATTTAATGTGTTTCAGGAATTTTCACCAGGATCCCATGGGCGAATGACTACAATGGGTGTTTATGTCCGTGATTTGCTCCTTGGACAGGTCAGGTTATATATCGACATCTCTCTTTAAATATCATGTTTCTTGGTTTCTTACCAAAACAAAAAAAATCATGTTTTTTGGTTAAATCTTTCTTTTTCTGTTTAAACTTCATTGCGTCAAAAACTTAATAAATTGTGTGTGTATATACAGTTGGTATGTGAATCTTGTGCAACCTGCTGTTGACATTTCTCTAGTGTTTAACCATGTGATGGAAGCACTGCGTTGTTGGAGCTTTTCTTTTTTCTTTTTTGGGAACTGATAATCCTGCATAAGCTCTCTCAATGCAGTTTCCGGATGTTACATTATCATGGTTGGAAGATGTTAAGAATTATATATATATAGAGAGAGAGAGAGAGTATAATAGAGTCAACGACTTTCATTAAGAGTTGAGGAGGTGCAAAAAAGTTCAGGAAAAGAACCACAACATAACGACAGTAGACCCCTCCCTCATTTAAGTTATTAGGAAACTCTTTTTTGACATTAAAATATCTTATAGTTCGTTATCATGGTGATTTGAAGCCATGTTCTCTGTTTTAGAAGGTGCTTCTGAGCTTTGAAGGCAATGCACATCCAAGGTGAAGTTGACTTCACAATTGTGCCTTTGGTCTCTCTCTCTCTCTCTTCTAATGTTCCCAATATTTTCTTAACGTTCCTTGTATAACCTTTTCTTTTAGTTCTATTTCCCACTAGAGCTGCCCCTTCATGAACTTTTAGAATCGTGATATGGAAAAAGTGTTGGCTTAGATCTAACTATTCATTTTTCTCACTTTATTTCAAGGTCCAAATCACGAATGAAAAATTTGCTAGGAGTGTTCTTGAAGTAAAGTAAATTTATCATTTGGATTCAATTATCTCTCTTATAGTGTATGGTGAAAAGAGATGAATCAAGTGTATATGATGAATAAAATAAAACATGAGAACTGGGTTTTACTTTTATCACATTGTTGTTATCTAAAACGTGTGATTATTTATTATTATTTTTTTTTTGAGAAAGAAACAAAGAACTTAATTCACAAAAGCCACAACAAAATACAGCCAAAGGGTCGAGGGATAAGGCATCCCTCCTCCAAAAGAAACTACACAAAAGCCTTCCAATGAAGGATAATCATGGCAGCAGAGTAATTACAAAAATTCCTCTCTAAAACGTGCGACTATTGACTTCACTAAATTGATGATTGAGGGCATGAATTGGAGACAGCCCTCAAAACCCTCTCTTTGTTCAGCCTATAGCTGCACAACTATTTGAGAATAGAAGGAAAGAACTGAAATGTTGTGTTTTAATGCTTTATCTGTAGAAAGCTGATGCAAATCTTGATATCTATGTATGGGTTTGCATTTGGACAAGTGAGGGGAATGATCATTAAGCTTTTACTTGTGTCCTTTCAGCTTTTAATCGGCAATAAGTGTGTTTCTTATGTTGTCTGTTGATATTTAAGTGATTGCTATTGTGTTGGCCAACAGGGTGGAATGATAATTATGCTAAATGTTTAAACTGGCACATTACCACATATCTGTTGTTTTTTTTCACTATATTGTTGTTGTTGTTGTTATTATTTTAAATCCTTGTCTTTGTAGTTAAAAGTACCCACATTATGTTTGTTCATTGCAGTACTACTTCGATACCCTTTTCCCTCGTATTCCAGTTCCTGTCTTGCGGCAAGTTGTAACTAATCTTGAAAAGTTGAAGCTGCCCAGCAAACATTCAGGTGTGACAGGGGAAACCCATCGAATGGGGTCTGAAGACACGGCACGGCGGCCACCTTCTGTAAAAGCTTCACTTTCAGTTTCCTTTGGACAACGAGCCCCACATCGTGCCTCAACTAGGGACTCATCCCCAGTTCGTCGTACACTACCACCATCAGCTAATGACAGAGATAACAGTGATGATCTTCGAAGATCTCCAAGCAGTCGCCGTAGTCAAAGTCGTGAACATCCAGATAACAGGGAGAGGAGCAGGGATAGAGACTACGACAGGGAGAGGAGCAGGGATAGAGATCATGACAGGGACAGGGGAAGGGATAGGGACCGAGATCGAGATCGTGATCGGGACAGAGAAAAGTATAGAGATCGGGAGAGGGACCGAGATAGAGATAGAGAACGAGAGAAAGCTAGGGATAGGGATAGGGATAGGGAGAGAGAGCGGGACAGAGAACGAAGTTATGATTATGATCGAAGGACTCATTATGCTGATAGAGATAGTAGAAGGGACTATGAAAGGGGTAGCCGTGATGGTGGTGCCAGACATTATCGAAGGAGTCGAAGCCGAAGTAGGAGCAGGAGCAGAAGTCGAAGTTTACAAACAGGGAACGGCCACCATGAGCGAGAGCCAAGTCCTGTAAGAGGTGGGACTACAGAGAAGCCATCTATCATATCGAGCAATCTGGCAAAACTTAAAGATATCTATGGTGATGTGAGCGAGCAGAAAGGGGATTCAAGCCGAGAAAGACTTAATATAAGGGATAGTAGTGGTGAAGAAGTGATTAGACTTGGTGGTTCCTGGAAATAGTGAGTGATGATGCTCTAATACAAGAACTCCACTGTATTCAATACCATGTTATCTTTATTTAGAAGACAGATTTAGTTTCTATTGGAAAAAGGGAAGAAAAATCATGTACTTGTCACTTGAGTTTATAGTATTCATCATCTCCCAATCTATCTCCTCAGTTGAATGCCCAGACTTGGGCAAAATGTAATACATGCAACCATGTTGGCTGTGTATTAGATTGAATTGACTTGATTACTGCTTGCTTTATGTTGAATGGACAAGGAAGGGAAGTCAATAGAACTTCTGTATCACTGGACTAATCACTTTGTTTGAAAGCTTATTCCTTCTGAAAAACTGTATTCTCATCCTCTGAATTCTTTTGCATTGTTGTTTAAATAGGCCAACTGGCAATTTG

mRNA sequence

ATGGAGATAAAGACTTGCGGGAAGCCAATTGATTCTTTGCTGGAGAAGGTTCTATGTATGAATATTCTGTCTTCTGATTACTTTAAGGAGCTTTATCGTTTGAAGACATACCATGAAGTGGTCGATGAAATTTATAACCAAGTTGATCATGTCGAGCCATGGATGACTGGGAACTGCCGTGGTCCTTCAACAGCATTCTGCCTTCTGTACAAGTTTTTCACCATGAAGCTTACGGTGAAGCAAATGCATGGGCTGTTAAAGCACGAGGATTCTCCTTACATCAGAGCGTTATCTAAGATTGGATTCCTCTACTTGAGATACGTTGCAGATCCAAAGACTCTCTGGAATTGGTTTGAACCTTATGTCAAAGATGAAGAGGACACCTTGTCCCTTTGTCTGTTAGGCAATTTTGGCTGGATTGGTGGTGCTTTCTATGGAAGGAGATATTTGGATGAAGTCTGCATGTGTAAAACAGGTTATCTTGATTTCGTATGTATCCCAGTGCCCATGATGCCAATTTTGCAGAGAGCTTTGACAGGAACACTGGTGCTTGGTCTTTTGGAATTTTCACCAGGATCCCATGGGCGAATGACTACAATGGGTGTTTATGTCCGTGATTTGCTCCTTGGACAGAAAGCTGATGCAAATCTTGATATCTATTACTACTTCGATACCCTTTTCCCTCGTATTCCAGTTCCTGTCTTGCGGCAAGTTGTAACTAATCTTGAAAAGTTGAAGCTGCCCAGCAAACATTCAGGTGTGACAGGGGAAACCCATCGAATGGGGTCTGAAGACACGGCACGGCGGCCACCTTCTGTAAAAGCTTCACTTTCAGTTTCCTTTGGACAACGAGCCCCACATCGTGCCTCAACTAGGGACTCATCCCCAGTTCGTCGTACACTACCACCATCAGCTAATGACAGAGATAACAGTGATGATCTTCGAAGATCTCCAAGCAGTCGCCGTAGTCAAAGTCGTGAACATCCAGATAACAGGGAGAGGAGCAGGGATAGAGACTACGACAGGGAGAGGAGCAGGGATAGAGATCATGACAGGGACAGGGGAAGGGATAGGGACCGAGATCGAGATCGTGATCGGGACAGAGAAAAGTATAGAGATCGGGAGAGGGACCGAGATAGAGATAGAGAACGAGAGAAAGCTAGGGATAGGGATAGGGATAGGGAGAGAGAGCGGGACAGAGAACGAAGTTATGATTATGATCGAAGGACTCATTATGCTGATAGAGATAGTAGAAGGGACTATGAAAGGGGTAGCCGTGATGGTGGTGCCAGACATTATCGAAGGAGTCGAAGCCGAAGTAGGAGCAGGAGCAGAAGTCGAAGTTTACAAACAGGGAACGGCCACCATGAGCGAGAGCCAAGTCCTGTAAGAGGTGGGACTACAGAGAAGCCATCTATCATATCGAGCAATCTGGCAAAACTTAAAGATATCTATGGTGATGTGAGCGAGCAGAAAGGGGATTCAAGCCGAGAAAGACTTAATATAAGGGATAGTAGTGGTGAAGAAGTGATTAGACTTGGTGGTTCCTGGAAATAG

Coding sequence (CDS)

ATGGAGATAAAGACTTGCGGGAAGCCAATTGATTCTTTGCTGGAGAAGGTTCTATGTATGAATATTCTGTCTTCTGATTACTTTAAGGAGCTTTATCGTTTGAAGACATACCATGAAGTGGTCGATGAAATTTATAACCAAGTTGATCATGTCGAGCCATGGATGACTGGGAACTGCCGTGGTCCTTCAACAGCATTCTGCCTTCTGTACAAGTTTTTCACCATGAAGCTTACGGTGAAGCAAATGCATGGGCTGTTAAAGCACGAGGATTCTCCTTACATCAGAGCGTTATCTAAGATTGGATTCCTCTACTTGAGATACGTTGCAGATCCAAAGACTCTCTGGAATTGGTTTGAACCTTATGTCAAAGATGAAGAGGACACCTTGTCCCTTTGTCTGTTAGGCAATTTTGGCTGGATTGGTGGTGCTTTCTATGGAAGGAGATATTTGGATGAAGTCTGCATGTGTAAAACAGGTTATCTTGATTTCGTATGTATCCCAGTGCCCATGATGCCAATTTTGCAGAGAGCTTTGACAGGAACACTGGTGCTTGGTCTTTTGGAATTTTCACCAGGATCCCATGGGCGAATGACTACAATGGGTGTTTATGTCCGTGATTTGCTCCTTGGACAGAAAGCTGATGCAAATCTTGATATCTATTACTACTTCGATACCCTTTTCCCTCGTATTCCAGTTCCTGTCTTGCGGCAAGTTGTAACTAATCTTGAAAAGTTGAAGCTGCCCAGCAAACATTCAGGTGTGACAGGGGAAACCCATCGAATGGGGTCTGAAGACACGGCACGGCGGCCACCTTCTGTAAAAGCTTCACTTTCAGTTTCCTTTGGACAACGAGCCCCACATCGTGCCTCAACTAGGGACTCATCCCCAGTTCGTCGTACACTACCACCATCAGCTAATGACAGAGATAACAGTGATGATCTTCGAAGATCTCCAAGCAGTCGCCGTAGTCAAAGTCGTGAACATCCAGATAACAGGGAGAGGAGCAGGGATAGAGACTACGACAGGGAGAGGAGCAGGGATAGAGATCATGACAGGGACAGGGGAAGGGATAGGGACCGAGATCGAGATCGTGATCGGGACAGAGAAAAGTATAGAGATCGGGAGAGGGACCGAGATAGAGATAGAGAACGAGAGAAAGCTAGGGATAGGGATAGGGATAGGGAGAGAGAGCGGGACAGAGAACGAAGTTATGATTATGATCGAAGGACTCATTATGCTGATAGAGATAGTAGAAGGGACTATGAAAGGGGTAGCCGTGATGGTGGTGCCAGACATTATCGAAGGAGTCGAAGCCGAAGTAGGAGCAGGAGCAGAAGTCGAAGTTTACAAACAGGGAACGGCCACCATGAGCGAGAGCCAAGTCCTGTAAGAGGTGGGACTACAGAGAAGCCATCTATCATATCGAGCAATCTGGCAAAACTTAAAGATATCTATGGTGATGTGAGCGAGCAGAAAGGGGATTCAAGCCGAGAAAGACTTAATATAAGGGATAGTAGTGGTGAAGAAGTGATTAGACTTGGTGGTTCCTGGAAATAG

Protein sequence

MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCRGPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRALSKIGFLYLRYVADPKTLWNWFEPYVKDEEDTLSLCLLGNFGWIGGAFYGRRYLDEVCMCKTGYLDFVCIPVPMMPILQRALTGTLVLGLLEFSPGSHGRMTTMGVYVRDLLLGQKADANLDIYYYFDTLFPRIPVPVLRQVVTNLEKLKLPSKHSGVTGETHRMGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSANDRDNSDDLRRSPSSRRSQSREHPDNRERSRDRDYDRERSRDRDHDRDRGRDRDRDRDRDRDREKYRDRERDRDRDREREKARDRDRDRERERDRERSYDYDRRTHYADRDSRRDYERGSRDGGARHYRRSRSRSRSRSRSRSLQTGNGHHEREPSPVRGGTTEKPSIISSNLAKLKDIYGDVSEQKGDSSRERLNIRDSSGEEVIRLGGSWK

Homology

[Close]

BLAST of Spg008429 vs. NCBI nr
Match: XP_038875168.1 (pre-mRNA splicing factor SR-like 1 isoform X1 [Benincasa hispida] >XP_038875169.1 pre-mRNA splicing factor SR-like 1 isoform X1 [Benincasa hispida])

HSP 1 Score: 732.3 bits (1889), Expect = 3.0e-207
Identity = 417/530 (78.68%), Postives = 429/530 (80.94%), Query Frame = 0


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRALSKIGFLYLRYVADPKTLWNWFEP 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA   IGFLYLRYVADPKTLW WFEP
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA---IGFLYLRYVADPKTLWTWFEP 120

Query: 121 YVKDEEDTLSLCLLGNFGWIGGAFYGRRYLDEVCMCKTGYLDFVCIPVPMMPILQRALTG 180
           YVKDEE                                                      
Sbjct: 121 YVKDEE------------------------------------------------------ 180

Query: 181 TLVLGLLEFSPGSHGRMTTMGVYVRDLLLGQKADANLDIYYYFDTLFPRIPVPVLRQVVT 240
                  EFSPGSHGRMTTMGVYVRDLLLGQ         YYFDTLFPRIPVPVLRQVV 
Sbjct: 181 -------EFSPGSHGRMTTMGVYVRDLLLGQ---------YYFDTLFPRIPVPVLRQVVA 240

Query: 241 NLEKLKLPSKHSGVTGETHRMGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRT 300
           NLEKLKLPSKHSGVTGETHR+GSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRT
Sbjct: 241 NLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRT 300

Query: 301 LPPSANDRDNSDDLRRSPSSRRSQSREHPDNRERSRDRDYDRERSRDRDH---------- 360
           LPPSANDRDNSDDLRRSPSSRRSQSREHPD+RERSRDRDYDRERSRDRD+          
Sbjct: 301 LPPSANDRDNSDDLRRSPSSRRSQSREHPDSRERSRDRDYDRERSRDRDYDRERSRDRDH 360

Query: 361 --DRDRGRDRDRDRDRDRDREKYRDRERDRDRDREREKARDRDRDRERERDRERSYDYDR 420
             DRDRGRDRDRDR+ DRDREKYRDRERDRDR+RER     RDR+R+RERDRERSYDYDR
Sbjct: 361 DRDRDRGRDRDRDREYDRDREKYRDRERDRDRERERA----RDRERDRERDRERSYDYDR 420

Query: 421 RTHYADRDSRRDYERGSRDGGARHYRRSRSRSRSRSRSRSLQTGNGHHEREPSPVRGGTT 480
           RTHY DR+SRRD+ER SRDGG+RHYRRSRSRSRSRSRSRSLQTGN HHEREPSP RGGTT
Sbjct: 421 RTHYNDRESRRDFERSSRDGGSRHYRRSRSRSRSRSRSRSLQTGNAHHEREPSPARGGTT 453

Query: 481 EKPSIISSNLAKLKDIYGDVSEQKGDSSRERLNIRDSSGEEVIRLGGSWK 519
           EK S ISSNLAKLKDIYGDVSEQKGDSS+ER+N RDSSGEEVIRLGG WK
Sbjct: 481 EKTSSISSNLAKLKDIYGDVSEQKGDSSKERVNRRDSSGEEVIRLGGYWK 453

[Close]

BLAST of Spg008429 vs. NCBI nr
Match: XP_022993767.1 (pre-mRNA splicing factor SR-like 1 [Cucurbita maxima])

HSP 1 Score: 716.8 bits (1849), Expect = 1.3e-202
Identity = 414/533 (77.67%), Postives = 427/533 (80.11%), Query Frame = 0


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRALSKIGFLYLRYVADPKTLWNWFEP 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA   IGFLYLRYVADPKTLWNW EP
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA---IGFLYLRYVADPKTLWNWVEP 120

Query: 121 YVKDEEDTLSLCLLGNFGWIGGAFYGRRYLDEVCMCKTGYLDFVCIPVPMMPILQRALTG 180
           YVKDEE                                                      
Sbjct: 121 YVKDEE------------------------------------------------------ 180

Query: 181 TLVLGLLEFSPGSHGRMTTMGVYVRDLLLGQKADANLDIYYYFDTLFPRIPVPVLRQVVT 240
                  EFSPGSHGRMTTMGVYVRDLLLGQ         YYFDTLFPRIPVPVLRQVV 
Sbjct: 181 -------EFSPGSHGRMTTMGVYVRDLLLGQ---------YYFDTLFPRIPVPVLRQVVA 240

Query: 241 NLEKLKLPSKHSGVTGETHRMGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRT 300
           NLEKLKLPSKHSGVTGETHR+GSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRT
Sbjct: 241 NLEKLKLPSKHSGVTGETHRLGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRT 300

Query: 301 LPPSANDRDNSDDLRRSPSSRRSQSREHPDNRERSRDRDYDRERSRDRD----------H 360
           LP SA DRDNSDDLRRSPSSRRSQSREHPD RERSRDRDYDRERSRDRD          +
Sbjct: 301 LPTSAIDRDNSDDLRRSPSSRRSQSREHPDTRERSRDRDYDRERSRDRDYDRERSRDREY 360

Query: 361 DRDRGRDRDRDRDRDRDREKYRDRERDRDRDREREKARDRDRDRERERDRERSYDYDRRT 420
           DRDRGRDRDR+R+ DRDREKYRDRERDR+RDREREKARDR+RD  RERDRERSYDYDRRT
Sbjct: 361 DRDRGRDRDREREHDRDREKYRDRERDRERDREREKARDRERD--RERDRERSYDYDRRT 420

Query: 421 HYADRDSRRDYERGSRDGGARHYRRSRSRSRSRSRSRSLQTG---NGHHEREPSPVRGGT 480
           HY DR+ RRD+ER SRDGG RHYRRSRSRSRSRS SRSLQTG   +GHHEREPSP RG T
Sbjct: 421 HYTDREGRRDFERSSRDGGTRHYRRSRSRSRSRSSSRSLQTGVNAHGHHEREPSPARGRT 458

Query: 481 TEKPSIISSNLAKLKDIYGDVSEQK--GDSSRERLNIRDSSGEEVIRLGGSWK 519
           +EK SIISSNLAKLKD+YGDVSEQK  GD S+ER+N RDSSGEEVIRLGGSWK
Sbjct: 481 SEKTSIISSNLAKLKDMYGDVSEQKGGGDPSKERINRRDSSGEEVIRLGGSWK 458

[Close]

BLAST of Spg008429 vs. NCBI nr
Match: XP_011655154.1 (pre-mRNA splicing factor SR-like 1 isoform X1 [Cucumis sativus] >XP_011655155.1 pre-mRNA splicing factor SR-like 1 isoform X1 [Cucumis sativus] >XP_031742200.1 pre-mRNA splicing factor SR-like 1 isoform X1 [Cucumis sativus] >XP_031742201.1 pre-mRNA splicing factor SR-like 1 isoform X1 [Cucumis sativus] >XP_031742202.1 pre-mRNA splicing factor SR-like 1 isoform X1 [Cucumis sativus] >KGN51086.2 hypothetical protein Csa_023135 [Cucumis sativus])

HSP 1 Score: 716.1 bits (1847), Expect = 2.2e-202
Identity = 411/520 (79.04%), Postives = 427/520 (82.12%), Query Frame = 0


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRALSKIGFLYLRYVADPKTLWNWFEP 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA   IGFLYLRYVADPKTLWNWFEP
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA---IGFLYLRYVADPKTLWNWFEP 120

Query: 121 YVKDEEDTLSLCLLGNFGWIGGAFYGRRYLDEVCMCKTGYLDFVCIPVPMMPILQRALTG 180
           YVKD+E                                                      
Sbjct: 121 YVKDDE------------------------------------------------------ 180

Query: 181 TLVLGLLEFSPGSHGRMTTMGVYVRDLLLGQKADANLDIYYYFDTLFPRIPVPVLRQVVT 240
                  EFSPGSHGRMTTMGVYVRDLLLGQ         YYFDTLFPRIPVPVLRQVV+
Sbjct: 181 -------EFSPGSHGRMTTMGVYVRDLLLGQ---------YYFDTLFPRIPVPVLRQVVS 240

Query: 241 NLEKLKLPSKHSGVTGETHRMGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRT 300
           NLEKLKLPSKHSGVTGETHR+GSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRT
Sbjct: 241 NLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRT 300

Query: 301 LPPSANDRDNSDDLRRSPSSRRSQSREHPDNRERSRDRDYDRERSRDRDH--DRDRGRDR 360
           LP SANDRDN+DDLRRSPS RRSQSREHPD+RERSRDR++DRERSRDRD+  DRDRGRDR
Sbjct: 301 LPSSANDRDNNDDLRRSPSIRRSQSREHPDSRERSRDREFDRERSRDRDYDRDRDRGRDR 360

Query: 361 DRDRDRDRDREKYRDRERDRDRDREREKARDRDRDRERERDRERSYDYDRRTHYADRDSR 420
           DRDR+ DRDREKYRDRE  RDRDREREKARDR+RD  RERDRERSYDYDRRTHY+DR+SR
Sbjct: 361 DRDREHDRDREKYRDRE--RDRDREREKARDRERD--RERDRERSYDYDRRTHYSDRESR 420

Query: 421 RDYERGSRDGGARHYRRSRSRSRSRSRSRSLQTGNGHHEREPSPVRGGTTEKPSIISSNL 480
           RD+ER SRDGG RHYRRSRSRSRSRSRSRSLQT   HHEREPSP RGGTTEK S+ISSNL
Sbjct: 421 RDFERSSRDGGTRHYRRSRSRSRSRSRSRSLQT---HHEREPSPARGGTTEKASVISSNL 438

Query: 481 AKLKDIYGDVSEQKGDSSRERLNIRDSSGEEVIRLGGSWK 519
           AKLKDIYGDVSEQKGDSS  ++N RD SGEEVIRLGGSWK
Sbjct: 481 AKLKDIYGDVSEQKGDSS--KVNRRDGSGEEVIRLGGSWK 438

[Close]

BLAST of Spg008429 vs. NCBI nr
Match: XP_022141497.1 (pre-mRNA splicing factor SR-like 1 isoform X1 [Momordica charantia] >XP_022141498.1 pre-mRNA splicing factor SR-like 1 isoform X1 [Momordica charantia])

HSP 1 Score: 715.7 bits (1846), Expect = 2.9e-202
Identity = 411/535 (76.82%), Postives = 426/535 (79.63%), Query Frame = 0


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRALSKIGFLYLRYVADPKTLWNWFEP 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA   IGFLYLRYVADPKTLWNWFEP
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA---IGFLYLRYVADPKTLWNWFEP 120

Query: 121 YVKDEEDTLSLCLLGNFGWIGGAFYGRRYLDEVCMCKTGYLDFVCIPVPMMPILQRALTG 180
           YVKDEE                                                      
Sbjct: 121 YVKDEE------------------------------------------------------ 180

Query: 181 TLVLGLLEFSPGSHGRMTTMGVYVRDLLLGQKADANLDIYYYFDTLFPRIPVPVLRQVVT 240
                  EFSPGSHGRMTTMGVYVRDLLLGQ         YYFDTLFPRIPVPVLRQVV 
Sbjct: 181 -------EFSPGSHGRMTTMGVYVRDLLLGQ---------YYFDTLFPRIPVPVLRQVVA 240

Query: 241 NLEKLKLPSKHSGVTGETHRMGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRT 300
           NLEKLKLPSKHSGVTGETHR+GSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRT
Sbjct: 241 NLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRT 300

Query: 301 LPPSANDRDNSDDLRRSPSSRRSQSREHPDNRERSRDRDYDRERSRDRDHDRDRGRD--- 360
           LPPSAND+DN DD+RRSPSSRRSQSREHPDN ERSRDRDYDRERSRDRDHDRDR RD   
Sbjct: 301 LPPSANDKDNGDDVRRSPSSRRSQSREHPDNGERSRDRDYDRERSRDRDHDRDRSRDRDH 360

Query: 361 -----RDRDRDRDRDREKYRDRERDRDRDREREKARDRDRDRERE--------RDRERSY 420
                RDRDRDRDRDREKYRDRERDRDRDR+R++ RDR+R+RERE        RDRERSY
Sbjct: 361 DRDRGRDRDRDRDRDREKYRDRERDRDRDRDRDRDRDRERERERERVRERERDRDRERSY 420

Query: 421 DYDRRTHYADRDSRRDYERGSRDGGARHYRRSRSRSRSRSRSRSLQTGNGHHEREPSPVR 480
           DYDRR+HYADRDSRRDYE+ SRD G+RHYRRSRSRSRSRSRSRSLQT N HHER PSPVR
Sbjct: 421 DYDRRSHYADRDSRRDYEKSSRDDGSRHYRRSRSRSRSRSRSRSLQTVNAHHERVPSPVR 462

Query: 481 GGTTEKPSIISSNLAKLKDIYGDVSEQKGDSSRERLNIRDSSGEEVIRL-GGSWK 519
            G T+K S ISSNLAKLKDIYGDVS+QKGD S+ER+  RD SGEEV RL GGSWK
Sbjct: 481 DGNTDKTSNISSNLAKLKDIYGDVSDQKGDCSKERVPKRDGSGEEVFRLGGGSWK 462

[Close]

BLAST of Spg008429 vs. NCBI nr
Match: KAG7016573.1 (Pre-mRNA splicing factor SR-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 712.6 bits (1838), Expect = 2.5e-201
Identity = 413/541 (76.34%), Postives = 425/541 (78.56%), Query Frame = 0


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRALSKIGFLYLRYVADPKTLWNWFEP 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA   IGFLYLRYVADPKTLWNW EP
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA---IGFLYLRYVADPKTLWNWVEP 120

Query: 121 YVKDEEDTLSLCLLGNFGWIGGAFYGRRYLDEVCMCKTGYLDFVCIPVPMMPILQRALTG 180
           YVKDEE                                                      
Sbjct: 121 YVKDEE------------------------------------------------------ 180

Query: 181 TLVLGLLEFSPGSHGRMTTMGVYVRDLLLGQKADANLDIYYYFDTLFPRIPVPVLRQVVT 240
                  EFSPGSHGRMTTMGVYVRDLLLGQ         YYFDTLFPRIPVPVLRQVV 
Sbjct: 181 -------EFSPGSHGRMTTMGVYVRDLLLGQ---------YYFDTLFPRIPVPVLRQVVA 240

Query: 241 NLEKLKLPSKHSGVTGETHRMGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRT 300
           NLEKLKLPSKHSGVTGETHR+GSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRT
Sbjct: 241 NLEKLKLPSKHSGVTGETHRLGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRT 300

Query: 301 LPPSANDRDNSDDLRRSPSSRRSQSREHPDNRERSRDRDYDRERSRDRDH---------- 360
           LP SA DRDNSDDLRRSPSSRRSQSREHPD RERSRDRDYDRERSRDRD+          
Sbjct: 301 LPTSAIDRDNSDDLRRSPSSRRSQSREHPDTRERSRDRDYDRERSRDRDYDRERSRDREF 360

Query: 361 DRDRGRDRDRDRDRDRDREKYRDRERDRDRDREREKARDRDRDRERERDRERSYDYDRRT 420
           DRDRGRDRDR+R+ DRDREKYRDRERDR+RDREREKARD      RERDRERSYDYDRRT
Sbjct: 361 DRDRGRDRDREREHDRDREKYRDRERDRERDREREKARD------RERDRERSYDYDRRT 420

Query: 421 HYADRDSRRDYERGSRDGGARHYRRSRSRSRSRSRSRSLQT-------GNGHHEREPSPV 480
           HY DR+ RRD+ER SRDGG RHYRRSRSRSRSRSRSRSLQT       G+GHHEREPSP 
Sbjct: 421 HYTDREGRRDFERSSRDGGTRHYRRSRSRSRSRSRSRSLQTGVNAHGHGHGHHEREPSPA 462

Query: 481 RGGTTEKPSIISSNLAKLKDIYGDVSEQK------GDSSRERLNIRDSSGEEVIRLGGSW 519
           RG T+EK SIISSNLAKLKD+YGDVSEQK      GDSS+ER+N RDSSGEEVIRLGGSW
Sbjct: 481 RGRTSEKTSIISSNLAKLKDMYGDVSEQKGGGGGGGDSSKERINRRDSSGEEVIRLGGSW 462

[Close]

BLAST of Spg008429 vs. ExPASy Swiss-Prot
Match: Q8RWB1 (Pre-mRNA splicing factor SR-like 1 OS=Arabidopsis thaliana OX=3702 GN=SRL1 PE=1 SV=1)

HSP 1 Score: 433.0 bits (1112), Expect = 4.9e-120
Identity = 282/522 (54.02%), Postives = 327/522 (62.64%), Query Frame = 0


Query: 2   EIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCRG 61
           EI++ G+  +SLLEKVL MNILSSDYFKELY LKTYHEV+DEIYNQV+HVEPWM GNCRG
Sbjct: 3   EIQSNGRAYESLLEKVLSMNILSSDYFKELYGLKTYHEVIDEIYNQVNHVEPWMGGNCRG 62

Query: 62  PSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRALSKIGFLYLRYVADPKTLWNWFEPY 121
           PSTA+CLLYKFFTMKLTVKQMHGLLKH DSPYIRA   +GFLYLRYVAD KTLW W+EPY
Sbjct: 63  PSTAYCLLYKFFTMKLTVKQMHGLLKHTDSPYIRA---VGFLYLRYVADAKTLWTWYEPY 122

Query: 122 VKDEEDTLSLCLLGNFGWIGGAFYGRRYLDEVCMCKTGYLDFVCIPVPMMPILQRALTGT 181
           +KD+E                                                       
Sbjct: 123 IKDDE------------------------------------------------------- 182

Query: 182 LVLGLLEFSPGSHGRMTTMGVYVRDLLLGQKADANLDIYYYFDTLFPRIPVPVLRQVVTN 241
                 EFSPGS+GRMTTMGVYVRDLLLG          YYFDTLFPRIPVPV+RQ+V+N
Sbjct: 183 ------EFSPGSNGRMTTMGVYVRDLLLG---------LYYFDTLFPRIPVPVMRQIVSN 242

Query: 242 LEKLKLPSKHSGVTGETHRMGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTL 301
           LEK+ LP+K SG TG+  R GSEDTARRPPSVKASLSVSFGQRAPHRASTR SSPVRR  
Sbjct: 243 LEKMNLPTKPSGSTGDMTR-GSEDTARRPPSVKASLSVSFGQRAPHRASTRGSSPVRRP- 302

Query: 302 PPSANDRDNSDDLRRSPSSRRSQSREHPDNRERSRDRDYDRERSRDRDHDRDRGRDRDRD 361
           PP+  DR+  D++++  S RRSQSR++                                 
Sbjct: 303 PPTGYDRNGGDEVQQR-SPRRSQSRDY--------------------------------- 362

Query: 362 RDRDRDREKYRDRERDRDRDREREKARDRDRDRERERDRERSYDYDRRTH--YADRDSRR 421
                    Y DR+ DR R+REREK R+R+R R+R R+RER Y  DRR+   Y  R  R 
Sbjct: 363 ---------YSDRDSDRQREREREKDRERERGRDRYRERERDYGNDRRSRRDYDSRSRRN 393

Query: 422 DYERGSRDGGARHYRRSRSRSRSRSRSRSLQTGNGHHEREPSPVRGGTTEKPS--IISSN 481
           DYE    D  +RH RRSRSRSRSRSRS  +       EREP+P R  + ++ S   ++SN
Sbjct: 423 DYE----DDRSRHDRRSRSRSRSRSRSVQI-------EREPTPKRDSSNKEKSAVTVNSN 393

Query: 482 LAKLKDIYGDVSEQKGDSSRERLNIRDSSGEEVIRLGG-SWK 519
           LAKLKD+YGD S QK D        +DSS EEVI+LGG SW+
Sbjct: 483 LAKLKDLYGDASSQKRDEGFG--TRKDSSSEEVIKLGGSSWR 393

[Close]

BLAST of Spg008429 vs. ExPASy Swiss-Prot
Match: Q5VTL8 (Pre-mRNA-splicing factor 38B OS=Homo sapiens OX=9606 GN=PRPF38B PE=1 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.9e-39
Identity = 189/535 (35.33%), Postives = 249/535 (46.54%), Query Frame = 0


Query: 14  LEKVLCMNILSSDYFK-ELYRLKTYHEVVDEIYNQVDHVEPW---------MTGNCRG-- 73
           L  ++  NILSS YFK +LY LKTYHEVVDEIY +V HVEPW          TG C G  
Sbjct: 58  LNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVR 117

Query: 74  -------PSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRALSKIGFLYLRYVADPKTL 133
                   STAFCLLYK FT+KLT KQ+ GL+ H DSPYIRAL   GF+Y+RY   P  L
Sbjct: 118 GVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRAL---GFMYIRYTQPPTDL 177

Query: 134 WNWFEPYVKDEEDTLSLCLLGNFGWIGGAFYGRRYLDEVCMCKTGYLDFVCIPVPMMPIL 193
           W+WFE ++ DEED                                               
Sbjct: 178 WDWFESFLDDEED----------------------------------------------- 237

Query: 194 QRALTGTLVLGLLEFSPGSHGRMTTMGVYVRDLLLGQKADANLDIYYYFDTLFPRIPVPV 253
                       L+   G  G + T+G  +R  L   +         +F TLFPRIPVPV
Sbjct: 238 ------------LDVKAGG-GCVMTIGEMLRSFLTKLE---------WFSTLFPRIPVPV 297

Query: 254 LRQVVTNLEKLKLPSKHSGVTGETHRMGSEDTARRPPSVKASLSVSFGQRAPHRASTRDS 313
            + +   ++      K  G  G    +      RR  S + SLS    +R+P R+ +R  
Sbjct: 298 QKNIDQQIKTRPRKIKKDGKEG-AEEIDRHVERRRSRSPRRSLS---PRRSPRRSRSR-- 357

Query: 314 SPVRRTLPPSANDRDNSDDLRRSPSSRRSQSREHPDNRERSRDRDYDRERSRDRDHDRDR 373
           S  R     S+ DR+   +  R    R ++ RE    R RS DR  +R RSR R+  R R
Sbjct: 358 SHHREGHGSSSFDRELEREKERQRLEREAKEREKERRRSRSIDRGLERRRSRSRERHRSR 417

Query: 374 GRDRDRDRD-RDRDREKYRDRERDRDRDREREKARDRDRDRERERDRERS---------- 433
            R RDR  D RDRDRE+ ++ ER R RDR+ +K R  +R++ERER RERS          
Sbjct: 418 SRSRDRKGDRRDRDREREKENERGRRRDRDYDKERGNEREKERERSRERSKEQRSRGEVE 477

Query: 434 -----YDYDRRTHYAD-RDSRRDYERG-SRDGGARHYRRSRS-----RSRSRSRSRSLQT 493
                 D D R H  D RDS+++ +   SR    +H  RSRS     RSRSRS+ +S + 
Sbjct: 478 EKKHKEDKDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKH 513

Query: 494 GNGHHEREPSPVRGGTTEKPSIISSNLAKLKDIYGDVSEQKGDSSRERLNIRDSS 507
            N   E+     R G+  +   +  +  K +        +K   S+ER + RD S
Sbjct: 538 KNESKEKSNKRSRSGSQGRTDSVEKS-KKREHSPSKEKSRKRSRSKERSHKRDHS 513

[Close]

BLAST of Spg008429 vs. ExPASy Swiss-Prot
Match: Q80SY5 (Pre-mRNA-splicing factor 38B OS=Mus musculus OX=10090 GN=Prpf38b PE=1 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.9e-39
Identity = 174/471 (36.94%), Postives = 224/471 (47.56%), Query Frame = 0


Query: 14  LEKVLCMNILSSDYFK-ELYRLKTYHEVVDEIYNQVDHVEPW---------MTGNCRG-- 73
           L  ++  NILSS YFK +LY LKTYHEVVDEIY +V HVEPW          TG C G  
Sbjct: 59  LNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVR 118

Query: 74  -------PSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRALSKIGFLYLRYVADPKTL 133
                   STAFCLLYK FT+KLT KQ+ GL+ H DSPYIRAL   GF+Y+RY   P  L
Sbjct: 119 GVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRAL---GFMYIRYTQPPTDL 178

Query: 134 WNWFEPYVKDEEDTLSLCLLGNFGWIGGAFYGRRYLDEVCMCKTGYLDFVCIPVPMMPIL 193
           W+WFE ++ DEED                                               
Sbjct: 179 WDWFESFLDDEED----------------------------------------------- 238

Query: 194 QRALTGTLVLGLLEFSPGSHGRMTTMGVYVRDLLLGQKADANLDIYYYFDTLFPRIPVPV 253
                       L+   G  G + T+G  +R  L   +         +F TLFPRIPVPV
Sbjct: 239 ------------LDVKAGG-GCVMTIGEMLRSFLTKLE---------WFSTLFPRIPVPV 298

Query: 254 LRQVVTNLEKLKLPSKHSGVTGETHRMGSEDTARRPPSVKASLSVSFGQRAPHRASTRDS 313
            + +   ++      K  G  G    +      RR  S + SLS    +R+P R+ +R  
Sbjct: 299 QKNIDQQIKTRPRKIKKDGKEG-IEEIDRHVERRRSRSPRRSLS---PRRSPRRSRSR-- 358

Query: 314 SPVRRTLPPSANDRDNSDDLRRSPSSRRSQSREHPDNRERSRDRDYDRERSRDRDHDRDR 373
           S  R     S+ DR+   +  R    R ++ RE    R RS DR  DR RSR R+  R R
Sbjct: 359 SHHREGHGSSSFDRELEREKERQRLEREAKEREKERRRSRSIDRGLDRRRSRSRERHRSR 418

Query: 374 GRDRDRD---RDRDRDREKYRDRERDRDRDREREKARDRDRDRERERDRERSY----DYD 433
            R RDR    RDRDR+REK  +R R RDRD ++E+  DR+RDRER R+R +      D +
Sbjct: 419 SRSRDRKGDRRDRDREREKENERGRRRDRDYDKERGSDRERDRERSRERSKEQRSRGDGE 448

Query: 434 RRTHYADRDSRRDYERGSRDGGARHYRRSRSRSRSRSRSRSLQTGNGHHER 459
            + H  D++ RR   R  +    + + RSRSR R + RSRS   G     R
Sbjct: 479 EKKHKEDKEDRR--HRDDKKESKKKHSRSRSRER-KHRSRSRNAGKRSRSR 448

[Close]

BLAST of Spg008429 vs. ExPASy Swiss-Prot
Match: Q6AXY7 (Pre-mRNA-splicing factor 38B OS=Rattus norvegicus OX=10116 GN=Prpf38b PE=1 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 2.5e-39
Identity = 187/523 (35.76%), Postives = 247/523 (47.23%), Query Frame = 0


Query: 14  LEKVLCMNILSSDYFK-ELYRLKTYHEVVDEIYNQVDHVEPW---------MTGNCRG-- 73
           L  ++  NILSS YFK +LY LKTYHEVVDEIY +V HVEPW          TG C G  
Sbjct: 58  LNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVR 117

Query: 74  -------PSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRALSKIGFLYLRYVADPKTL 133
                   STAFCLLYK FT+KLT KQ+ GL+ H DSPYIRAL   GF+Y+RY   P  L
Sbjct: 118 GVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRAL---GFMYIRYTQPPTDL 177

Query: 134 WNWFEPYVKDEEDTLSLCLLGNFGWIGGAFYGRRYLDEVCMCKTGYLDFVCIPVPMMPIL 193
           W+WFE ++ DEED                                               
Sbjct: 178 WDWFESFLDDEED----------------------------------------------- 237

Query: 194 QRALTGTLVLGLLEFSPGSHGRMTTMGVYVRDLLLGQKADANLDIYYYFDTLFPRIPVPV 253
                       L+   G  G + T+G  +R  L   +         +F TLFPRIPVPV
Sbjct: 238 ------------LDVKAGG-GCVMTIGEMLRSFLTKLE---------WFSTLFPRIPVPV 297

Query: 254 LRQVVTNLEKLKLPSKHSGVTGETHRMGSEDTARRPPSVKASLSVSFGQRAPHRASTRDS 313
            + +   ++      K  G  G    +      RR  S + SLS    +R+P R+ +R  
Sbjct: 298 QKNIDQQIKTRPRKIKKDGKEG-VEEIDRHIERRRSRSPRRSLS---PRRSPRRSRSR-- 357

Query: 314 SPVRRTLPPSANDRDNSDDLRRSPSSRRSQSREHPDNRERSRDRDYDRERSRDRDHDRDR 373
           S  R     S+ DR+   +  R    R ++ RE    R RS DR  DR RSR R+  R R
Sbjct: 358 SHHRDGHGSSSFDRELEREKERQRLEREAKEREKERRRSRSLDRGLDRRRSRSRERHRSR 417

Query: 374 GRDRDRDRD-RDRDREKYRDRERDRDRDREREKARDRDRDRERERDRERSYDY------D 433
            R RDR  D RDRDRE+ ++ ER R RDR+ +K R  DR+R+RER RERS +       +
Sbjct: 418 SRSRDRKGDRRDRDREREKENERGRRRDRDYDKDRGNDRERDRERSRERSKEQRSRGEGE 477

Query: 434 RRTHYADRDSRRDYERGSRDGGARHYRRSRSRSRS-RSRSRSLQTGNGHHER---EPSPV 493
            + H  D++ RR   R  +    + + RSRSR R  RSRSRS   G     R   + S  
Sbjct: 478 EKKHKEDKEDRR--HRDDKKESKKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKDKASKH 498

Query: 494 RGGTTEKPSIISSNLAKLKDIYGDVSEQKGDSSRERLNIRDSS 507
           +  + EK +  S + ++ +   G V ++K + S  R   R  S
Sbjct: 538 KNESKEKSNKRSRSGSQGRT--GSVEKRKREHSPSREKSRKRS 498

[Close]

BLAST of Spg008429 vs. ExPASy Swiss-Prot
Match: Q6P7Y3 (Pre-mRNA-splicing factor 38B OS=Danio rerio OX=7955 GN=prpf38b PE=2 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 1.3e-32
Identity = 173/538 (32.16%), Postives = 237/538 (44.05%), Query Frame = 0


Query: 14  LEKVLCMNILSSDYFK-ELYRLKTYHEVVDEIYNQVDHVEPW---------MTGNCRG-- 73
           L  ++  N+LSS YFK +LY LKTYHEVVDEIY +V+HVEPW          TG C G  
Sbjct: 36  LNPMILTNVLSSPYFKVQLYELKTYHEVVDEIYFKVNHVEPWEKGSRKTAGQTGMCGGVR 95

Query: 74  -------PSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRALSKIGFLYLRYVADPKTL 133
                   STAFCLLYK FT+KLT KQ+ GL+ H DSP IRAL   GF+Y+RY   P  L
Sbjct: 96  GVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHSDSPDIRAL---GFMYIRYTQPPPDL 155

Query: 134 WNWFEPYVKDEEDTLSLCLLGNFGWIGGAFYGRRYLDEVCMCKTGYLDFVCIPVPMMPIL 193
            +W++ ++ DEE+                                               
Sbjct: 156 VDWYDEFLDDEEE----------------------------------------------- 215

Query: 194 QRALTGTLVLGLLEFSPGSHGRMTTMGVYVRDLLLGQKADANLDIYYYFDTLFPRIPVPV 253
                       L+   G  G + T+G  +R  L   +         +F TLFPRIPVPV
Sbjct: 216 ------------LDVKAGG-GCVMTVGEMLRSFLTKLE---------WFSTLFPRIPVPV 275

Query: 254 LRQVVTNLEKLKLPSKHSGVTGETHRMGSEDTARRPPSVKASLSVSFGQRAPHRASTRDS 313
            + +  +++     S+      +  +   E+ A   P+              H    R  
Sbjct: 276 QKAIDQHMK-----SRPRKPPQKDEQEEEEEEATAAPA---------ADTGRHGDKRRSR 335

Query: 314 SPVRRTLPPSANDRDNSDDLRRSPSSRRSQSREHPDNRERSRDRDYDRERSRDRDHDRDR 373
           +P R   P  + +R  S   R     R   S ++   RER R R     + RDRD DRDR
Sbjct: 336 TPRRSPSPRKSQNRSRS---RSHHRERHGASFDYELERERDRQRKEREGKDRDRDRDRDR 395

Query: 374 GRDRDRDRDRDRDREKYRDRERDRDRDREREKAR-----------DRDRDRERERDRERS 433
            RDR+RDRDR R R   R+ ER R R RER ++R           DRD+DRE E +RERS
Sbjct: 396 ERDRERDRDRRRSRTPDRNAERRRSRSRERRRSRSTSRDKRTERKDRDKDREAESERERS 455

Query: 434 YDYDRRTHYADRDSRRDYERGSRDGGARHYR-----------RSRSRSRSRSRSRSLQTG 493
              DR  H+ DR+  +D +R   +G  R ++           +   RSRSRSR R  +  
Sbjct: 456 RKKDRE-HHKDRERSKD-KRSKGEGEERRHKDDKEEKKHREEKRSKRSRSRSRDRKHKAE 478

Query: 494 NGHHEREPSPVRGGTTEKPSIISSNLAKLKDIYGDVSEQKGDSSRERLNIRDSSGEEV 511
               +R     R G+  +         K +  +    + K   S+ER + R+SS E +
Sbjct: 516 RSSKKRS----RSGSRSRQEAGEEKNRKRERSHSKDRQHKRSRSKERSHRRESSNERI 478

[Close]

BLAST of Spg008429 vs. ExPASy TrEMBL
Match: A0A6J1JTS5 (Pre-mRNA-splicing factor 38 OS=Cucurbita maxima OX=3661 GN=LOC111489677 PE=3 SV=1)

HSP 1 Score: 716.8 bits (1849), Expect = 6.3e-203
Identity = 414/533 (77.67%), Postives = 427/533 (80.11%), Query Frame = 0


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRALSKIGFLYLRYVADPKTLWNWFEP 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA   IGFLYLRYVADPKTLWNW EP
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA---IGFLYLRYVADPKTLWNWVEP 120

Query: 121 YVKDEEDTLSLCLLGNFGWIGGAFYGRRYLDEVCMCKTGYLDFVCIPVPMMPILQRALTG 180
           YVKDEE                                                      
Sbjct: 121 YVKDEE------------------------------------------------------ 180

Query: 181 TLVLGLLEFSPGSHGRMTTMGVYVRDLLLGQKADANLDIYYYFDTLFPRIPVPVLRQVVT 240
                  EFSPGSHGRMTTMGVYVRDLLLGQ         YYFDTLFPRIPVPVLRQVV 
Sbjct: 181 -------EFSPGSHGRMTTMGVYVRDLLLGQ---------YYFDTLFPRIPVPVLRQVVA 240

Query: 241 NLEKLKLPSKHSGVTGETHRMGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRT 300
           NLEKLKLPSKHSGVTGETHR+GSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRT
Sbjct: 241 NLEKLKLPSKHSGVTGETHRLGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRT 300

Query: 301 LPPSANDRDNSDDLRRSPSSRRSQSREHPDNRERSRDRDYDRERSRDRD----------H 360
           LP SA DRDNSDDLRRSPSSRRSQSREHPD RERSRDRDYDRERSRDRD          +
Sbjct: 301 LPTSAIDRDNSDDLRRSPSSRRSQSREHPDTRERSRDRDYDRERSRDRDYDRERSRDREY 360

Query: 361 DRDRGRDRDRDRDRDRDREKYRDRERDRDRDREREKARDRDRDRERERDRERSYDYDRRT 420
           DRDRGRDRDR+R+ DRDREKYRDRERDR+RDREREKARDR+RD  RERDRERSYDYDRRT
Sbjct: 361 DRDRGRDRDREREHDRDREKYRDRERDRERDREREKARDRERD--RERDRERSYDYDRRT 420

Query: 421 HYADRDSRRDYERGSRDGGARHYRRSRSRSRSRSRSRSLQTG---NGHHEREPSPVRGGT 480
           HY DR+ RRD+ER SRDGG RHYRRSRSRSRSRS SRSLQTG   +GHHEREPSP RG T
Sbjct: 421 HYTDREGRRDFERSSRDGGTRHYRRSRSRSRSRSSSRSLQTGVNAHGHHEREPSPARGRT 458

Query: 481 TEKPSIISSNLAKLKDIYGDVSEQK--GDSSRERLNIRDSSGEEVIRLGGSWK 519
           +EK SIISSNLAKLKD+YGDVSEQK  GD S+ER+N RDSSGEEVIRLGGSWK
Sbjct: 481 SEKTSIISSNLAKLKDMYGDVSEQKGGGDPSKERINRRDSSGEEVIRLGGSWK 458

[Close]

BLAST of Spg008429 vs. ExPASy TrEMBL
Match: A0A6J1CK04 (Pre-mRNA-splicing factor 38 OS=Momordica charantia OX=3673 GN=LOC111011867 PE=3 SV=1)

HSP 1 Score: 715.7 bits (1846), Expect = 1.4e-202
Identity = 411/535 (76.82%), Postives = 426/535 (79.63%), Query Frame = 0


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRALSKIGFLYLRYVADPKTLWNWFEP 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA   IGFLYLRYVADPKTLWNWFEP
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA---IGFLYLRYVADPKTLWNWFEP 120

Query: 121 YVKDEEDTLSLCLLGNFGWIGGAFYGRRYLDEVCMCKTGYLDFVCIPVPMMPILQRALTG 180
           YVKDEE                                                      
Sbjct: 121 YVKDEE------------------------------------------------------ 180

Query: 181 TLVLGLLEFSPGSHGRMTTMGVYVRDLLLGQKADANLDIYYYFDTLFPRIPVPVLRQVVT 240
                  EFSPGSHGRMTTMGVYVRDLLLGQ         YYFDTLFPRIPVPVLRQVV 
Sbjct: 181 -------EFSPGSHGRMTTMGVYVRDLLLGQ---------YYFDTLFPRIPVPVLRQVVA 240

Query: 241 NLEKLKLPSKHSGVTGETHRMGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRT 300
           NLEKLKLPSKHSGVTGETHR+GSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRT
Sbjct: 241 NLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRT 300

Query: 301 LPPSANDRDNSDDLRRSPSSRRSQSREHPDNRERSRDRDYDRERSRDRDHDRDRGRD--- 360
           LPPSAND+DN DD+RRSPSSRRSQSREHPDN ERSRDRDYDRERSRDRDHDRDR RD   
Sbjct: 301 LPPSANDKDNGDDVRRSPSSRRSQSREHPDNGERSRDRDYDRERSRDRDHDRDRSRDRDH 360

Query: 361 -----RDRDRDRDRDREKYRDRERDRDRDREREKARDRDRDRERE--------RDRERSY 420
                RDRDRDRDRDREKYRDRERDRDRDR+R++ RDR+R+RERE        RDRERSY
Sbjct: 361 DRDRGRDRDRDRDRDREKYRDRERDRDRDRDRDRDRDRERERERERVRERERDRDRERSY 420

Query: 421 DYDRRTHYADRDSRRDYERGSRDGGARHYRRSRSRSRSRSRSRSLQTGNGHHEREPSPVR 480
           DYDRR+HYADRDSRRDYE+ SRD G+RHYRRSRSRSRSRSRSRSLQT N HHER PSPVR
Sbjct: 421 DYDRRSHYADRDSRRDYEKSSRDDGSRHYRRSRSRSRSRSRSRSLQTVNAHHERVPSPVR 462

Query: 481 GGTTEKPSIISSNLAKLKDIYGDVSEQKGDSSRERLNIRDSSGEEVIRL-GGSWK 519
            G T+K S ISSNLAKLKDIYGDVS+QKGD S+ER+  RD SGEEV RL GGSWK
Sbjct: 481 DGNTDKTSNISSNLAKLKDIYGDVSDQKGDCSKERVPKRDGSGEEVFRLGGGSWK 462

[Close]

BLAST of Spg008429 vs. ExPASy TrEMBL
Match: A0A6J1FF63 (Pre-mRNA-splicing factor 38 OS=Cucurbita moschata OX=3662 GN=LOC111444923 PE=3 SV=1)

HSP 1 Score: 710.7 bits (1833), Expect = 4.5e-201
Identity = 411/540 (76.11%), Postives = 425/540 (78.70%), Query Frame = 0


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRALSKIGFLYLRYVADPKTLWNWFEP 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA   IGFLYLRYVADPKTLWNW EP
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA---IGFLYLRYVADPKTLWNWVEP 120

Query: 121 YVKDEEDTLSLCLLGNFGWIGGAFYGRRYLDEVCMCKTGYLDFVCIPVPMMPILQRALTG 180
           YVKDEE                                                      
Sbjct: 121 YVKDEE------------------------------------------------------ 180

Query: 181 TLVLGLLEFSPGSHGRMTTMGVYVRDLLLGQKADANLDIYYYFDTLFPRIPVPVLRQVVT 240
                  EFSPGSHGRMTTMGVYVRDLLLGQ         YYFDTLFPRIPVPVLRQVV 
Sbjct: 181 -------EFSPGSHGRMTTMGVYVRDLLLGQ---------YYFDTLFPRIPVPVLRQVVA 240

Query: 241 NLEKLKLPSKHSGVTGETHRMGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRT 300
           NLEKLKLPSKHSGVTGETHR+GSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRT
Sbjct: 241 NLEKLKLPSKHSGVTGETHRLGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRT 300

Query: 301 LPPSANDRDNSDDLRRSPSSRRSQSREHPDNRERSRDRDYDRERSRDRDH---------- 360
           LP SA DRDN+DDLRRSPSSRRSQSREHPD RERSRDRDYDRERSRDRD+          
Sbjct: 301 LPTSAIDRDNNDDLRRSPSSRRSQSREHPDTRERSRDRDYDRERSRDRDYDRERSRDREY 360

Query: 361 ----DRDRGRDRDRDRDRDRDREKYRDRERDRDRDREREKARDRDRDRERERDRERSYDY 420
               DRDRGRDRDR+++ DRDREKYRDRERDR+RDREREKARD      RERDRERSYDY
Sbjct: 361 DRDRDRDRGRDRDREQEHDRDREKYRDRERDRERDREREKARD------RERDRERSYDY 420

Query: 421 DRRTHYADRDSRRDYERGSRDGGARHYRRSRSRSRSRSRSRSLQTG---NGHHEREPSPV 480
           DRRTHY DRD RRD+ER SRDGG RHYRRSRSRSRSRSRSRSLQTG   +GHHEREPSP 
Sbjct: 421 DRRTHYTDRDGRRDFERSSRDGGTRHYRRSRSRSRSRSRSRSLQTGVNAHGHHEREPSPA 461

Query: 481 RGGTTEKPSIISSNLAKLKDIYGDVSEQK-----GDSSRERLNIRDSSGEEVIRLGGSWK 519
           RG T+EK SIISSNLAKLKD+YGDVSEQK     GDSS+ER+N RDSSGEEVIRLGGSW+
Sbjct: 481 RGRTSEKTSIISSNLAKLKDMYGDVSEQKGGGGGGDSSKERINRRDSSGEEVIRLGGSWR 461

[Close]

BLAST of Spg008429 vs. ExPASy TrEMBL
Match: A0A5D3D5T6 (Pre-mRNA-splicing factor 38 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold418G00040 PE=3 SV=1)

HSP 1 Score: 698.0 bits (1800), Expect = 3.0e-197
Identity = 409/550 (74.36%), Postives = 424/550 (77.09%), Query Frame = 0


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRALSKIGFLYLRYVADPKTLWNWFEP 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA   IGFLYLRYVADPKTLWNWFEP
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA---IGFLYLRYVADPKTLWNWFEP 120

Query: 121 YVKDEEDTLSLCLLGNFGWIGGAFYGRRYLDEVCMCKTGYLDFVCIPVPMMPILQRALTG 180
           YVKD+E                                                      
Sbjct: 121 YVKDDE------------------------------------------------------ 180

Query: 181 TLVLGLLEFSPGSHGRMTTMGVYVRDLLLGQKADANLDIYYYFDTLFPRIPVPVLRQVVT 240
                  EFSPGSHGRMTTMGVYVRDLLLGQ         YYFDTLFPRIPVPVLRQVV+
Sbjct: 181 -------EFSPGSHGRMTTMGVYVRDLLLGQ---------YYFDTLFPRIPVPVLRQVVS 240

Query: 241 NLEKLKLPSKHSGVTGETHRMGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRT 300
           NLEKLKLPSKHSGVTGETHR+GSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRT
Sbjct: 241 NLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRT 300

Query: 301 LPPSANDRDNSDDLRRSPSSRRSQSREHPDNRERSRDRDYDRERSRDR------------ 360
           LP S NDRD +DDLRRSPS+RRSQSREHPD+RERSRDR+YDRERSRDR            
Sbjct: 301 LPSSVNDRDINDDLRRSPSNRRSQSREHPDSRERSRDREYDRERSRDREYDRERSRDRDY 360

Query: 361 --------------------DHDRDRGRDRDRDRDRDRDREKYRDRERDRDRDREREKAR 420
                               D DRDRGRDRDRDR+ DRDREKYRDRE  RDRDREREKAR
Sbjct: 361 DRERSRDRDYDRERSRDRDYDRDRDRGRDRDRDRELDRDREKYRDRE--RDRDREREKAR 420

Query: 421 DRDRDRERERDRERSYDYDRRTHYADRDSRRDYERGSRDGGARHYRRSRSRSRSRSRSRS 480
           DR+RD  RERDRERSYDYDRRTHY+DR+SRRD+ER SRDGG RHYRRSRSRSRSRSR RS
Sbjct: 421 DRERD--RERDRERSYDYDRRTHYSDRESRRDFERSSRDGGTRHYRRSRSRSRSRSRGRS 468

Query: 481 LQTGNGHHEREPSPVRGGTTEKPSIISSNLAKLKDIYGDVSEQKGDSSRERLNIRDSSGE 519
           LQT   HHERE SP RGGTTEK S+ISSNLAKLKDIYGDVSEQKGDSS  ++N RDSSGE
Sbjct: 481 LQT---HHEREQSPARGGTTEKASVISSNLAKLKDIYGDVSEQKGDSS--KINRRDSSGE 468

[Close]

BLAST of Spg008429 vs. ExPASy TrEMBL
Match: A0A5A7TWJ6 (Pre-mRNA-splicing factor 38 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold284G00850 PE=3 SV=1)

HSP 1 Score: 694.1 bits (1790), Expect = 4.4e-196
Identity = 409/560 (73.04%), Postives = 424/560 (75.71%), Query Frame = 0


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRALSKIGFLYLRYVADPKTLWNWFEP 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA   IGFLYLRYVADPKTLWNWFEP
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA---IGFLYLRYVADPKTLWNWFEP 120

Query: 121 YVKDEEDTLSLCLLGNFGWIGGAFYGRRYLDEVCMCKTGYLDFVCIPVPMMPILQRALTG 180
           YVKD+E                                                      
Sbjct: 121 YVKDDE------------------------------------------------------ 180

Query: 181 TLVLGLLEFSPGSHGRMTTMGVYVRDLLLGQKADANLDIYYYFDTLFPRIPVPVLRQVVT 240
                  EFSPGSHGRMTTMGVYVRDLLLGQ         YYFDTLFPRIPVPVLRQVV+
Sbjct: 181 -------EFSPGSHGRMTTMGVYVRDLLLGQ---------YYFDTLFPRIPVPVLRQVVS 240

Query: 241 NLEKLKLPSKHSGVTGETHRMGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRT 300
           NLEKLKLPSKHSGVTGETHR+GSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRT
Sbjct: 241 NLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRT 300

Query: 301 LPPSANDRDNSDDLRRSPSSRRSQSREHPDNRERSRDRDYDRERSRDR------------ 360
           LP S NDRD +DDLRRSPS+RRSQSREHPD+RERSRDR+YDRERSRDR            
Sbjct: 301 LPSSVNDRDINDDLRRSPSNRRSQSREHPDSRERSRDREYDRERSRDREYDRERSRDRDY 360

Query: 361 ------------------------------DHDRDRGRDRDRDRDRDRDREKYRDRERDR 420
                                         D DRDRGRDRDRDR+ DRDREKYRDRE  R
Sbjct: 361 DRERSRDRDYDRERSRDRDYDRERSRDRDYDRDRDRGRDRDRDRELDRDREKYRDRE--R 420

Query: 421 DRDREREKARDRDRDRERERDRERSYDYDRRTHYADRDSRRDYERGSRDGGARHYRRSRS 480
           DRDREREKARDR+RD  RERDRERSYDYDRRTHY+DR+SRRD+ER SRDGG RHYRRSRS
Sbjct: 421 DRDREREKARDRERD--RERDRERSYDYDRRTHYSDRESRRDFERSSRDGGTRHYRRSRS 478

Query: 481 RSRSRSRSRSLQTGNGHHEREPSPVRGGTTEKPSIISSNLAKLKDIYGDVSEQKGDSSRE 519
           RSRSRSR RSLQT   HHERE SP RGGTTEK S+ISSNLAKLKDIYGDVSEQKGDSS  
Sbjct: 481 RSRSRSRGRSLQT---HHEREQSPARGGTTEKASVISSNLAKLKDIYGDVSEQKGDSS-- 478

[Close]

BLAST of Spg008429 vs. TAIR 10
Match: AT5G37370.1 (PRP38 family protein )

HSP 1 Score: 433.0 bits (1112), Expect = 3.5e-121
Identity = 282/522 (54.02%), Postives = 327/522 (62.64%), Query Frame = 0


Query: 2   EIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCRG 61
           EI++ G+  +SLLEKVL MNILSSDYFKELY LKTYHEV+DEIYNQV+HVEPWM GNCRG
Sbjct: 3   EIQSNGRAYESLLEKVLSMNILSSDYFKELYGLKTYHEVIDEIYNQVNHVEPWMGGNCRG 62

Query: 62  PSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRALSKIGFLYLRYVADPKTLWNWFEPY 121
           PSTA+CLLYKFFTMKLTVKQMHGLLKH DSPYIRA   +GFLYLRYVAD KTLW W+EPY
Sbjct: 63  PSTAYCLLYKFFTMKLTVKQMHGLLKHTDSPYIRA---VGFLYLRYVADAKTLWTWYEPY 122

Query: 122 VKDEEDTLSLCLLGNFGWIGGAFYGRRYLDEVCMCKTGYLDFVCIPVPMMPILQRALTGT 181
           +KD+E                                                       
Sbjct: 123 IKDDE------------------------------------------------------- 182

Query: 182 LVLGLLEFSPGSHGRMTTMGVYVRDLLLGQKADANLDIYYYFDTLFPRIPVPVLRQVVTN 241
                 EFSPGS+GRMTTMGVYVRDLLLG          YYFDTLFPRIPVPV+RQ+V+N
Sbjct: 183 ------EFSPGSNGRMTTMGVYVRDLLLG---------LYYFDTLFPRIPVPVMRQIVSN 242

Query: 242 LEKLKLPSKHSGVTGETHRMGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTL 301
           LEK+ LP+K SG TG+  R GSEDTARRPPSVKASLSVSFGQRAPHRASTR SSPVRR  
Sbjct: 243 LEKMNLPTKPSGSTGDMTR-GSEDTARRPPSVKASLSVSFGQRAPHRASTRGSSPVRRP- 302

Query: 302 PPSANDRDNSDDLRRSPSSRRSQSREHPDNRERSRDRDYDRERSRDRDHDRDRGRDRDRD 361
           PP+  DR+  D++++  S RRSQSR++                                 
Sbjct: 303 PPTGYDRNGGDEVQQR-SPRRSQSRDY--------------------------------- 362

Query: 362 RDRDRDREKYRDRERDRDRDREREKARDRDRDRERERDRERSYDYDRRTH--YADRDSRR 421
                    Y DR+ DR R+REREK R+R+R R+R R+RER Y  DRR+   Y  R  R 
Sbjct: 363 ---------YSDRDSDRQREREREKDRERERGRDRYRERERDYGNDRRSRRDYDSRSRRN 393

Query: 422 DYERGSRDGGARHYRRSRSRSRSRSRSRSLQTGNGHHEREPSPVRGGTTEKPS--IISSN 481
           DYE    D  +RH RRSRSRSRSRSRS  +       EREP+P R  + ++ S   ++SN
Sbjct: 423 DYE----DDRSRHDRRSRSRSRSRSRSVQI-------EREPTPKRDSSNKEKSAVTVNSN 393

Query: 482 LAKLKDIYGDVSEQKGDSSRERLNIRDSSGEEVIRLGG-SWK 519
           LAKLKD+YGD S QK D        +DSS EEVI+LGG SW+
Sbjct: 483 LAKLKDLYGDASSQKRDEGFG--TRKDSSSEEVIKLGGSSWR 393

[Close]

BLAST of Spg008429 vs. TAIR 10
Match: AT5G37370.2 (PRP38 family protein )

HSP 1 Score: 417.5 bits (1072), Expect = 1.5e-116
Identity = 275/522 (52.68%), Postives = 320/522 (61.30%), Query Frame = 0


Query: 2   EIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCRG 61
           EI++ G+  +SLLEKVL MNILSSDYFKELY LKTYHEV+DEIYNQV+HVEPWM GNCRG
Sbjct: 3   EIQSNGRAYESLLEKVLSMNILSSDYFKELYGLKTYHEVIDEIYNQVNHVEPWMGGNCRG 62

Query: 62  PSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRALSKIGFLYLRYVADPKTLWNWFEPY 121
           PSTA+CLLYKFFTMKLTVKQMHGLLKH DSPYIRA   +GFLYLRYVAD KTLW W+EPY
Sbjct: 63  PSTAYCLLYKFFTMKLTVKQMHGLLKHTDSPYIRA---VGFLYLRYVADAKTLWTWYEPY 122

Query: 122 VKDEEDTLSLCLLGNFGWIGGAFYGRRYLDEVCMCKTGYLDFVCIPVPMMPILQRALTGT 181
           +KD+E                                                       
Sbjct: 123 IKDDE------------------------------------------------------- 182

Query: 182 LVLGLLEFSPGSHGRMTTMGVYVRDLLLGQKADANLDIYYYFDTLFPRIPVPVLRQVVTN 241
                 EFSPGS+GRMTTMGV                 YYYFDTLFPRIPVPV+RQ+V+N
Sbjct: 183 ------EFSPGSNGRMTTMGV-----------------YYYFDTLFPRIPVPVMRQIVSN 242

Query: 242 LEKLKLPSKHSGVTGETHRMGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTL 301
           LEK+ LP+K SG TG+  R GSEDTARRPPSVKASLSVSFGQRAPHRASTR SSPVRR  
Sbjct: 243 LEKMNLPTKPSGSTGDMTR-GSEDTARRPPSVKASLSVSFGQRAPHRASTRGSSPVRRP- 302

Query: 302 PPSANDRDNSDDLRRSPSSRRSQSREHPDNRERSRDRDYDRERSRDRDHDRDRGRDRDRD 361
           PP+  DR+  D++++  S RRSQSR++                                 
Sbjct: 303 PPTGYDRNGGDEVQQR-SPRRSQSRDY--------------------------------- 362

Query: 362 RDRDRDREKYRDRERDRDRDREREKARDRDRDRERERDRERSYDYDRRTH--YADRDSRR 421
                    Y DR+ DR R+REREK R+R+R R+R R+RER Y  DRR+   Y  R  R 
Sbjct: 363 ---------YSDRDSDRQREREREKDRERERGRDRYRERERDYGNDRRSRRDYDSRSRRN 385

Query: 422 DYERGSRDGGARHYRRSRSRSRSRSRSRSLQTGNGHHEREPSPVRGGTTEKPS--IISSN 481
           DYE    D  +RH RRSRSRSRSRSRS  +       EREP+P R  + ++ S   ++SN
Sbjct: 423 DYE----DDRSRHDRRSRSRSRSRSRSVQI-------EREPTPKRDSSNKEKSAVTVNSN 385

Query: 482 LAKLKDIYGDVSEQKGDSSRERLNIRDSSGEEVIRLGG-SWK 519
           LAKLKD+YGD S QK D        +DSS EEVI+LGG SW+
Sbjct: 483 LAKLKDLYGDASSQKRDEGFG--TRKDSSSEEVIKLGGSSWR 385

[Close]

BLAST of Spg008429 vs. TAIR 10
Match: AT5G37370.4 (PRP38 family protein )

HSP 1 Score: 346.3 bits (887), Expect = 4.3e-95
Identity = 240/469 (51.17%), Postives = 279/469 (59.49%), Query Frame = 0


Query: 55  MTGNCRGPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRALSKIGFLYLRYVADPKTL 114
           M GNCRGPSTA+CLLYKFFTMKLTVKQMHGLLKH DSPYIRA   +GFLYLRYVAD KTL
Sbjct: 1   MGGNCRGPSTAYCLLYKFFTMKLTVKQMHGLLKHTDSPYIRA---VGFLYLRYVADAKTL 60

Query: 115 WNWFEPYVKDEEDTLSLCLLGNFGWIGGAFYGRRYLDEVCMCKTGYLDFVCIPVPMMPIL 174
           W W+EPY+KD+E                                                
Sbjct: 61  WTWYEPYIKDDE------------------------------------------------ 120

Query: 175 QRALTGTLVLGLLEFSPGSHGRMTTMGVYVRDLLLGQKADANLDIYYYFDTLFPRIPVPV 234
                        EFSPGS+GRMTTMGVYVRDLLLG          YYFDTLFPRIPVPV
Sbjct: 121 -------------EFSPGSNGRMTTMGVYVRDLLLG---------LYYFDTLFPRIPVPV 180

Query: 235 LRQVVTNLEKLKLPSKHSGVTGETHRMGSEDTARRPPSVKASLSVSFGQRAPHRASTRDS 294
           +RQ+V+NLEK+ LP+K SG TG+  R GSEDTARRPPSVKASLSVSFGQRAPHRASTR S
Sbjct: 181 MRQIVSNLEKMNLPTKPSGSTGDMTR-GSEDTARRPPSVKASLSVSFGQRAPHRASTRGS 240

Query: 295 SPVRRTLPPSANDRDNSDDLRRSPSSRRSQSREHPDNRERSRDRDYDRERSRDRDHDRDR 354
           SPVRR  PP+  DR+  D++++  S RRSQSR++                          
Sbjct: 241 SPVRRP-PPTGYDRNGGDEVQQR-SPRRSQSRDY-------------------------- 300

Query: 355 GRDRDRDRDRDRDREKYRDRERDRDRDREREKARDRDRDRERERDRERSYDYDRRTH--Y 414
                           Y DR+ DR R+REREK R+R+R R+R R+RER Y  DRR+   Y
Sbjct: 301 ----------------YSDRDSDRQREREREKDRERERGRDRYRERERDYGNDRRSRRDY 338

Query: 415 ADRDSRRDYERGSRDGGARHYRRSRSRSRSRSRSRSLQTGNGHHEREPSPVRGGTTEKPS 474
             R  R DYE    D  +RH RRSRSRSRSRSRS  +       EREP+P R  + ++ S
Sbjct: 361 DSRSRRNDYE----DDRSRHDRRSRSRSRSRSRSVQI-------EREPTPKRDSSNKEKS 338

Query: 475 --IISSNLAKLKDIYGDVSEQKGDSSRERLNIRDSSGEEVIRLGG-SWK 519
              ++SNLAKLKD+YGD S QK D        +DSS EEVI+LGG SW+
Sbjct: 421 AVTVNSNLAKLKDLYGDASSQKRDEGFG--TRKDSSSEEVIKLGGSSWR 338

[Close]

BLAST of Spg008429 vs. TAIR 10
Match: AT5G37370.3 (PRP38 family protein )

HSP 1 Score: 175.6 bits (444), Expect = 1.0e-43
Identity = 81/96 (84.38%), Postives = 89/96 (92.71%), Query Frame = 0


Query: 2  EIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCRG 61
          EI++ G+  +SLLEKVL MNILSSDYFKELY LKTYHEV+DEIYNQV+HVEPWM GNCRG
Sbjct: 3  EIQSNGRAYESLLEKVLSMNILSSDYFKELYGLKTYHEVIDEIYNQVNHVEPWMGGNCRG 62

Query: 62 PSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAL 98
          PSTA+CLLYKFFTMKLTVKQMHGLLKH DSPYIRA+
Sbjct: 63 PSTAYCLLYKFFTMKLTVKQMHGLLKHTDSPYIRAI 98

[Close]

BLAST of Spg008429 vs. TAIR 10
Match: AT1G60900.1 (U2 snRNP auxilliary factor, large subunit, splicing factor )

HSP 1 Score: 48.5 bits (114), Expect = 1.9e-05
Identity = 73/150 (48.67%), Postives = 91/150 (60.67%), Query Frame = 0


Query: 306 NDRDNSDDLRRSPSSRRSQSRE-HPDNRERSRDRDYDRERSRDRD--HDRDRGRDRDRDR 365
           N  +N   L  SP    S+SRE H   ++ S+  + D E  RD+D   DRDR +DRDR++
Sbjct: 17  NHNENYISLESSPFHEDSKSRESHDLKKDSSKISEKDNENGRDKDGNKDRDREKDRDREK 76

Query: 366 DRDRDREKYRDRERDRDRDREREK---ARDRDRDRERERDRER-SYDYDRRTHYADRDSR 425
            RDRDREK RDR+RDR+R ++R++    RDR RDR RER  +R   D D      DRD R
Sbjct: 77  SRDRDREKSRDRDRDRERSKDRQRDRHHRDRHRDRSRERSEKRDDLDDDHHRRSRDRDRR 136

Query: 426 RDYERGSRDGGARHYRRSRSRSRSRSRSRS 449
           R  +   RD   RH RRSRSRSRSRS  RS
Sbjct: 137 RSRD---RDREVRHRRRSRSRSRSRSERRS 163

The following BLAST results are available for this feature:

BLAST of Spg008429 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875168.1	3.0e-207	78.68	pre-mRNA splicing factor SR-like 1 isoform X1 [Benincasa hispida] >XP_038875169....	[more]
XP_022993767.1	1.3e-202	77.67	pre-mRNA splicing factor SR-like 1 [Cucurbita maxima]	[more]
XP_011655154.1	2.2e-202	79.04	pre-mRNA splicing factor SR-like 1 isoform X1 [Cucumis sativus] >XP_011655155.1 ...	[more]
XP_022141497.1	2.9e-202	76.82	pre-mRNA splicing factor SR-like 1 isoform X1 [Momordica charantia] >XP_02214149...	[more]
KAG7016573.1	2.5e-201	76.34	Pre-mRNA splicing factor SR-like 1, partial [Cucurbita argyrosperma subsp. argyr...	[more]

BLAST of Spg008429 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RWB1	4.9e-120	54.02	Pre-mRNA splicing factor SR-like 1 OS=Arabidopsis thaliana OX=3702 GN=SRL1 PE=1 ...	[more]
Q5VTL8	1.9e-39	35.33	Pre-mRNA-splicing factor 38B OS=Homo sapiens OX=9606 GN=PRPF38B PE=1 SV=1	[more]
Q80SY5	1.9e-39	36.94	Pre-mRNA-splicing factor 38B OS=Mus musculus OX=10090 GN=Prpf38b PE=1 SV=1	[more]
Q6AXY7	2.5e-39	35.76	Pre-mRNA-splicing factor 38B OS=Rattus norvegicus OX=10116 GN=Prpf38b PE=1 SV=1	[more]
Q6P7Y3	1.3e-32	32.16	Pre-mRNA-splicing factor 38B OS=Danio rerio OX=7955 GN=prpf38b PE=2 SV=1	[more]

BLAST of Spg008429 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JTS5	6.3e-203	77.67	Pre-mRNA-splicing factor 38 OS=Cucurbita maxima OX=3661 GN=LOC111489677 PE=3 SV=...	[more]
A0A6J1CK04	1.4e-202	76.82	Pre-mRNA-splicing factor 38 OS=Momordica charantia OX=3673 GN=LOC111011867 PE=3 ...	[more]
A0A6J1FF63	4.5e-201	76.11	Pre-mRNA-splicing factor 38 OS=Cucurbita moschata OX=3662 GN=LOC111444923 PE=3 S...	[more]
A0A5D3D5T6	3.0e-197	74.36	Pre-mRNA-splicing factor 38 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A5A7TWJ6	4.4e-196	73.04	Pre-mRNA-splicing factor 38 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]

BLAST of Spg008429 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G37370.1	3.5e-121	54.02	PRP38 family protein	[more]
AT5G37370.2	1.5e-116	52.68	PRP38 family protein	[more]
AT5G37370.4	4.3e-95	51.17	PRP38 family protein	[more]
AT5G37370.3	1.0e-43	84.38	PRP38 family protein	[more]
AT1G60900.1	1.9e-05	48.67	U2 snRNP auxilliary factor, large subunit, splicing factor	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024767	Pre-mRNA-splicing factor 38, C-terminal	PFAM	PF12871	PRP38_assoc	coord: 259..350 e-value: 9.0E-7 score: 29.5
IPR005037	Pre-mRNA-splicing factor 38	PFAM	PF03371	PRP38	coord: 12..126 e-value: 1.2E-39 score: 136.0
IPR005037	Pre-mRNA-splicing factor 38	PANTHER	PTHR23142	UNCHARACTERIZED	coord: 188..402
IPR005037	Pre-mRNA-splicing factor 38	PANTHER	PTHR23142	UNCHARACTERIZED	coord: 367..516 coord: 1..128
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 276..301
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 450..464
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 305..431
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 250..473
None	No IPR available	PANTHER	PTHR23142:SF3	PRP38 FAMILY PROTEIN	coord: 367..516 coord: 1..128
None	No IPR available	PANTHER	PTHR23142:SF3	PRP38 FAMILY PROTEIN	coord: 188..402

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg008429.1	Spg008429.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0071011	precatalytic spliceosome