Spg008416 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg008416
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	two-component response regulator ORR4-like
Location	scaffold10: 32101321 .. 32102970 (-)
RNA-Seq Expression	Spg008416
Synteny	Spg008416

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTAGTACATCAAACCTCTGACCTCTTGGTCGAAGGTACATGTCAATTACCACTAAGCTAAGCTCGCTTTGACAAAACAAATTAGAATATTAATGGCATGTCAAACCTTGAAATTCAGCACTATATTAAAAGCTTTATTAGTCAAAATTTAAAGTTTAAATACCCATCCAAAAATTTCAAAATTTAAAGTTTAGAAACTCATCCCGTCAAACTTCACCCACCAAAATTTTAATTCAACCATAAATATTTAAAACTCAAAAAATTAAAAATAAATAAATAAATAAAAAAGAGACGTCAAAATAGAATGATTTGAAAAAAGAAAAAAAAAAAATGGTAATAGAAAGAGAAGGTTGGTGGGGATGTTAGAAGCACGTTAGACGTACTCTCCAACAGCACAGGCTTTAGCCTTTACGAAAAGGTGACAAACACAAACAGGCGCGCCCACGGCTGCTCGAAATCAACAACACTTTCATTCGCAAAATCCATTAAACAATTGGTCAAGAGTCGCCCCCCATCTAAACCAAATCAACCTTCAAGATCCTCTCGATTCCGAATCAAATCTGTCGGATCTCACTTTCCAACTGTCACATTTCAAGATCTTCTTCCTATGGAATCGATCCTCCTTTCGATCCATAGATATATAAAAACTCCTCCATCCCCTTCTCCCTCTCATCACTTCTCAATTCTCATTCCATCGATCTTTTTCTCCATTTCTCTCTGTGAATCTAGCCATGGGCGTTGCTGTCGAAACCACGCAGTTCCATGTTCTTGCCGTTGATGATAGCTTCATCGATCGGAAATTGATCGAGCGCCTCCTCAAAACCTCTTCCTATCATGGTATTCATCGATTTCAGTTTCTCTTTCTTGGGGTTTTTTTCCCCCTCTCGGATTTAGGGCTAATCGGTGTTTGATTTTCTGTTTTGATTAGTTACTGCTGTTGATTCTGGTACCAAGGCCTTGGAATTCCTCGGTCTTGTTGAAGATCGTGCTCACGACGATGAACAACGCGACTCCAAAATCGCCCCGACCTCGAATCATCATCCTCATTCGCGACAGGAAGTGGATGTGAATTTGATCATCACGGATTACAGTATGCCTGGAATGAGCGGCTACGAGCTCCTCAGGAAGATCAAGGTTTGCCCTAATTTCCTCTCCTTTTTTTTTTATTCTGCAGAGCAATCAAAATAACCGAATCCAATGAGATCCAATTCGATGACTAAATCAATTTGATCATGTAATTGCAGGAATCGAAATCTCTTAAAGACATACCAGTTGTGATCATGTCCTCTGAGAACGTTCCTTCGAGAATCAACAGATGCTTGGAAGAAGGAGCTGAAGAATTCTTCCTCAAACCAGTTCAATTGTCTGATGTGAGGAAGTTGAGACCTCATTTGATTAAAGAAAAATCAACCAGGAATTGATGAAGAAGATGAAGAAGAAGAATTCTTCAACTAATTTTAATTTTTTTTTTTTTTTTTTTTTTTTTAATTTTAGCAATTCTGTAAAGAATTAGATCCGAAACTGACTACTATATTTCATCACTAGCAAGTTCTAAACACAGATTTTCTCGGAAAACTAACAGAGAAAAAAGAATGTATAGATCTGCTGTTCAATTTTGCCTGCTGATTTATGGAGTAAAACTTTTTATT

mRNA sequence

ATGGGCGTTGCTGTCGAAACCACGCAGTTCCATGTTCTTGCCGTTGATGATAGCTTCATCGATCGGAAATTGATCGAGCGCCTCCTCAAAACCTCTTCCTATCATGTTACTGCTGTTGATTCTGGTACCAAGGCCTTGGAATTCCTCGGTCTTGAATCGAAATCTCTTAAAGACATACCAGTTGTGATCATGTCCTCTGAGAACGTTCCTTCGAGAATCAACAGATGCTTGGAAGAAGGAGCTGAAGAATTCTTCCTCAAACCAGTTCAATTGTCTGATGTGAGGAAGTTGAGACCTCATTTGATTAAAGAAAAATCAACCAGGAATTGA

Coding sequence (CDS)

ATGGGCGTTGCTGTCGAAACCACGCAGTTCCATGTTCTTGCCGTTGATGATAGCTTCATCGATCGGAAATTGATCGAGCGCCTCCTCAAAACCTCTTCCTATCATGTTACTGCTGTTGATTCTGGTACCAAGGCCTTGGAATTCCTCGGTCTTGAATCGAAATCTCTTAAAGACATACCAGTTGTGATCATGTCCTCTGAGAACGTTCCTTCGAGAATCAACAGATGCTTGGAAGAAGGAGCTGAAGAATTCTTCCTCAAACCAGTTCAATTGTCTGATGTGAGGAAGTTGAGACCTCATTTGATTAAAGAAAAATCAACCAGGAATTGA

Protein sequence

MGVAVETTQFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLESKSLKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTRN

Homology

[Close]

BLAST of Spg008416 vs. NCBI nr
Match: KAG7032635.1 (Two-component response regulator ARR9 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 189.5 bits (480), Expect = 1.5e-44
Identity = 108/157 (68.79%), Postives = 109/157 (69.43%), Query Frame = 0


Query: 1   MGVAVETTQFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGL--------- 60
           MGVAVETT+FHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGL         
Sbjct: 1   MGVAVETTRFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVEDPDLDDD 60

Query: 61  ---------------------------------------ESKSLKDIPVVIMSSENVPSR 110
                                                  ESKSLKDIPVVIMSSENVPSR
Sbjct: 61  DDEQHSKLPPSIQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENVPSR 120

[Close]

BLAST of Spg008416 vs. NCBI nr
Match: XP_022993798.1 (two-component response regulator ORR4-like [Cucurbita maxima])

HSP 1 Score: 186.0 bits (471), Expect = 1.7e-43
Identity = 106/157 (67.52%), Postives = 107/157 (68.15%), Query Frame = 0


Query: 1   MGVAVETTQFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGL--------- 60
           MGVAVE+TQFHVLAVDDSFIDRKLIERLLKTSSYHVT VDSG KALEFLGL         
Sbjct: 1   MGVAVESTQFHVLAVDDSFIDRKLIERLLKTSSYHVTVVDSGNKALEFLGLDGDHDDDDD 60

Query: 61  ---------------------------------------ESKSLKDIPVVIMSSENVPSR 110
                                                  ESKSLKDIPVVIMSSENVPSR
Sbjct: 61  EPDSEIAPSNHHQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENVPSR 120

[Close]

BLAST of Spg008416 vs. NCBI nr
Match: XP_023550008.1 (two-component response regulator ORR4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 184.9 bits (468), Expect = 3.8e-43
Identity = 105/156 (67.31%), Postives = 107/156 (68.59%), Query Frame = 0


Query: 1   MGVAVETTQFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGL--------- 60
           MGVAVE+T+FHVLAVDDSFIDRKLIERLLKTSSYHVT VDSG KALEFLGL         
Sbjct: 1   MGVAVESTRFHVLAVDDSFIDRKLIERLLKTSSYHVTVVDSGNKALEFLGLVGDHDDDDE 60

Query: 61  --------------------------------------ESKSLKDIPVVIMSSENVPSRI 110
                                                 ESKSLKDIPVVIMSSENVPSRI
Sbjct: 61  TDSEIAPSNHHQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENVPSRI 120

[Close]

BLAST of Spg008416 vs. NCBI nr
Match: XP_022938947.1 (two-component response regulator ORR4-like [Cucurbita moschata])

HSP 1 Score: 184.9 bits (468), Expect = 3.8e-43
Identity = 106/160 (66.25%), Postives = 107/160 (66.88%), Query Frame = 0


Query: 1   MGVAVETTQFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGL--------- 60
           MGVAVE+TQFHVLAVDDSFIDRKLIERLLKTSSYHVT VDSG KALEFLGL         
Sbjct: 1   MGVAVESTQFHVLAVDDSFIDRKLIERLLKTSSYHVTVVDSGNKALEFLGLVGDHDDDDD 60

Query: 61  ------------------------------------------ESKSLKDIPVVIMSSENV 110
                                                     ESKSLKDIPVVIMSSENV
Sbjct: 61  DDDEPDSEIAPSNHHQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENV 120

[Close]

BLAST of Spg008416 vs. NCBI nr
Match: XP_038875323.1 (two-component response regulator ORR4-like [Benincasa hispida])

HSP 1 Score: 184.1 bits (466), Expect = 6.4e-43
Identity = 106/158 (67.09%), Postives = 107/158 (67.72%), Query Frame = 0


Query: 1   MGVAVETTQFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGL--------- 60
           M VAVETT+FHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGL         
Sbjct: 1   MVVAVETTRFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLAEDHNHDEE 60

Query: 61  ----------------------------------------ESKSLKDIPVVIMSSENVPS 110
                                                   ESKS KDIPVVIMSSENVPS
Sbjct: 61  TNSSKIAPSNQHHQDVDVNLIITDYSMPGMSGYELLRKIKESKSFKDIPVVIMSSENVPS 120

[Close]

BLAST of Spg008416 vs. ExPASy Swiss-Prot
Match: B8BLZ4 (Two-component response regulator ORR10 OS=Oryza sativa subsp. indica OX=39946 GN=RR10 PE=2 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 8.1e-33
Identity = 80/146 (54.79%), Postives = 93/146 (63.70%), Query Frame = 0


Query: 1   MGVAVETTQFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGL--------- 60
           M VA+E   FHVLAVDDS  DRKLIERLLKTSS+ VT VDSG+KALEFLGL         
Sbjct: 1   MAVAIE-APFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSPIS 60

Query: 61  --------------------------------ESKSLKDIPVVIMSSENVPSRINRCLEE 106
                                           ES  L+DIPVVIMSS+N+PSRINRCLEE
Sbjct: 61  TQSDQQEVGVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRCLEE 120

[Close]

BLAST of Spg008416 vs. ExPASy Swiss-Prot
Match: Q2QXY3 (Two-component response regulator ORR10 OS=Oryza sativa subsp. japonica OX=39947 GN=RR10 PE=2 SV=2)

HSP 1 Score: 141.0 bits (354), Expect = 8.1e-33
Identity = 80/146 (54.79%), Postives = 93/146 (63.70%), Query Frame = 0


Query: 1   MGVAVETTQFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGL--------- 60
           M VA+E   FHVLAVDDS  DRKLIERLLKTSS+ VT VDSG+KALEFLGL         
Sbjct: 1   MAVAIE-APFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSPIS 60

Query: 61  --------------------------------ESKSLKDIPVVIMSSENVPSRINRCLEE 106
                                           ES  L+DIPVVIMSS+N+PSRINRCLEE
Sbjct: 61  TQSDQQEVGVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRCLEE 120

[Close]

BLAST of Spg008416 vs. ExPASy Swiss-Prot
Match: Q4GZK2 (Two-component response regulator ORR9 OS=Oryza sativa subsp. indica OX=39946 GN=RR9 PE=2 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 8.1e-33
Identity = 80/146 (54.79%), Postives = 93/146 (63.70%), Query Frame = 0


Query: 1   MGVAVETTQFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGL--------- 60
           M VA+E   FHVLAVDDS  DRKLIERLLKTSS+ VT VDSG+KALEFLGL         
Sbjct: 1   MAVAIE-APFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSPIS 60

Query: 61  --------------------------------ESKSLKDIPVVIMSSENVPSRINRCLEE 106
                                           ES  L+DIPVVIMSS+N+PSRINRCLEE
Sbjct: 61  TQSDQQEVAVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRCLEE 120

[Close]

BLAST of Spg008416 vs. ExPASy Swiss-Prot
Match: Q2RAP3 (Two-component response regulator ORR9 OS=Oryza sativa subsp. japonica OX=39947 GN=RR9 PE=2 SV=2)

HSP 1 Score: 141.0 bits (354), Expect = 8.1e-33
Identity = 80/146 (54.79%), Postives = 93/146 (63.70%), Query Frame = 0


Query: 1   MGVAVETTQFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGL--------- 60
           M VA+E   FHVLAVDDS  DRKLIERLLKTSS+ VT VDSG+KALEFLGL         
Sbjct: 1   MAVAIE-APFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSPIS 60

Query: 61  --------------------------------ESKSLKDIPVVIMSSENVPSRINRCLEE 106
                                           ES  L+DIPVVIMSS+N+PSRINRCLEE
Sbjct: 61  TQSDQQEVAVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRCLEE 120

[Close]

BLAST of Spg008416 vs. ExPASy Swiss-Prot
Match: Q4GZK7 (Two-component response regulator ORR4 OS=Oryza sativa subsp. indica OX=39946 GN=RR4 PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 2.0e-31
Identity = 79/150 (52.67%), Postives = 90/150 (60.00%), Query Frame = 0


Query: 1   MGVAVETTQFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLE-------- 60
           M V    ++FHVLAVDDS IDRKLIE LLK SSY VT VDSG+KALE LGL         
Sbjct: 1   MTVVDAESRFHVLAVDDSLIDRKLIEMLLKNSSYQVTTVDSGSKALELLGLRDEGDDSSS 60

Query: 61  -------------------------------------SKSLKDIPVVIMSSENVPSRINR 106
                                                S SLKDIPVVIMSSENVP+RINR
Sbjct: 61  SPSSSSPDHQEIDVNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARINR 120

[Close]

BLAST of Spg008416 vs. ExPASy TrEMBL
Match: A0A6J1K3C0 (two-component response regulator ORR4-like OS=Cucurbita maxima OX=3661 GN=LOC111489700 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 8.2e-44
Identity = 106/157 (67.52%), Postives = 107/157 (68.15%), Query Frame = 0


Query: 1   MGVAVETTQFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGL--------- 60
           MGVAVE+TQFHVLAVDDSFIDRKLIERLLKTSSYHVT VDSG KALEFLGL         
Sbjct: 1   MGVAVESTQFHVLAVDDSFIDRKLIERLLKTSSYHVTVVDSGNKALEFLGLDGDHDDDDD 60

Query: 61  ---------------------------------------ESKSLKDIPVVIMSSENVPSR 110
                                                  ESKSLKDIPVVIMSSENVPSR
Sbjct: 61  EPDSEIAPSNHHQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENVPSR 120

[Close]

BLAST of Spg008416 vs. ExPASy TrEMBL
Match: A0A6J1FFG9 (two-component response regulator ORR4-like OS=Cucurbita moschata OX=3662 GN=LOC111445004 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.8e-43
Identity = 106/160 (66.25%), Postives = 107/160 (66.88%), Query Frame = 0


Query: 1   MGVAVETTQFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGL--------- 60
           MGVAVE+TQFHVLAVDDSFIDRKLIERLLKTSSYHVT VDSG KALEFLGL         
Sbjct: 1   MGVAVESTQFHVLAVDDSFIDRKLIERLLKTSSYHVTVVDSGNKALEFLGLVGDHDDDDD 60

Query: 61  ------------------------------------------ESKSLKDIPVVIMSSENV 110
                                                     ESKSLKDIPVVIMSSENV
Sbjct: 61  DDDEPDSEIAPSNHHQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENV 120

[Close]

BLAST of Spg008416 vs. ExPASy TrEMBL
Match: A0A6J1JQG8 (two-component response regulator ORR4-like OS=Cucurbita maxima OX=3661 GN=LOC111486903 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 5.3e-43
Identity = 108/162 (66.67%), Postives = 109/162 (67.28%), Query Frame = 0


Query: 1   MGVA----VETTQFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGL----- 60
           MGVA    VETT+FHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGL     
Sbjct: 1   MGVAVAVDVETTRFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVEDPD 60

Query: 61  --------------------------------------------ESKSLKDIPVVIMSSE 110
                                                       ESKSLKDIPVVIMSSE
Sbjct: 61  LDDDVDDEQHSKLPPSIQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSE 120

[Close]

BLAST of Spg008416 vs. ExPASy TrEMBL
Match: A0A6J1GPD5 (two-component response regulator ORR4-like OS=Cucurbita moschata OX=3662 GN=LOC111456248 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 5.3e-43
Identity = 108/162 (66.67%), Postives = 109/162 (67.28%), Query Frame = 0


Query: 1   MGVA----VETTQFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGL----- 60
           MGVA    VETT+FHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGL     
Sbjct: 1   MGVAVAVDVETTRFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVEDPD 60

Query: 61  --------------------------------------------ESKSLKDIPVVIMSSE 110
                                                       ESKSLKDIPVVIMSSE
Sbjct: 61  LDDDVDDEQHSKLPPSIQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSE 120

[Close]

BLAST of Spg008416 vs. ExPASy TrEMBL
Match: A0A0A0KQE6 (Response regulatory domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G434550 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.2e-42
Identity = 105/156 (67.31%), Postives = 106/156 (67.95%), Query Frame = 0


Query: 1   MGVAVETTQFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGL--------- 60
           M VAVE+T FHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGL         
Sbjct: 1   MVVAVESTPFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVQHHDQQTD 60

Query: 61  --------------------------------------ESKSLKDIPVVIMSSENVPSRI 110
                                                 ESKSLKDIPVVIMSSENVPSRI
Sbjct: 61  SKIAPDQNHHHQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRI 120

[Close]

BLAST of Spg008416 vs. TAIR 10
Match: AT3G57040.1 (response regulator 9 )

HSP 1 Score: 136.0 bits (341), Expect = 1.9e-32
Identity = 79/151 (52.32%), Postives = 93/151 (61.59%), Query Frame = 0


Query: 1   MGVAVETTQFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGL--------- 60
           MG+A E +QFHVLAVDDS  DRKLIERLL+ SS  VT VDSG+KALEFLGL         
Sbjct: 1   MGMAAE-SQFHVLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGLRQSTDSNDP 60

Query: 61  -------------------------------------ESKSLKDIPVVIMSSENVPSRIN 106
                                                ES + +DIPVVIMSSENVP+RI+
Sbjct: 61  NAFSKAPVNHQVVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARIS 120

[Close]

BLAST of Spg008416 vs. TAIR 10
Match: AT2G41310.1 (response regulator 3 )

HSP 1 Score: 127.9 bits (320), Expect = 5.1e-30
Identity = 72/142 (50.70%), Postives = 87/142 (61.27%), Query Frame = 0


Query: 8   TQFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGL---------------- 67
           ++FHVLAVDDS  DRK+IERLL+ SS  VT VDSG+KALEFLGL                
Sbjct: 7   SKFHVLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLRVDDNDPNALSTSPQI 66

Query: 68  ----------------------------ESKSLKDIPVVIMSSENVPSRINRCLEEGAEE 106
                                       ES + + IPVVIMSSENVP+RI+RCLEEGAEE
Sbjct: 67  HQEVEINLIITDYCMPGMTGYDLLKKVKESAAFRSIPVVIMSSENVPARISRCLEEGAEE 126

[Close]

BLAST of Spg008416 vs. TAIR 10
Match: AT1G59940.1 (response regulator 3 )

HSP 1 Score: 117.1 bits (292), Expect = 8.9e-27
Identity = 66/136 (48.53%), Postives = 86/136 (63.24%), Query Frame = 0


Query: 5   VETTQFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGL------------- 64
           +++ Q HVLAVDDS +DR +IERLL+ +S  VTAVDSG +ALEFLGL             
Sbjct: 28  LDSDQVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDDDKAAVEFDRLK 87

Query: 65  -----------------------ESKSLKDIPVVIMSSENVPSRINRCLEEGAEEFFLKP 105
                                  ES S K++PVVIMSSENV +RI+RCLEEGAE+F LKP
Sbjct: 88  VDLIITDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVMTRIDRCLEEGAEDFLLKP 147

[Close]

BLAST of Spg008416 vs. TAIR 10
Match: AT1G10470.1 (response regulator 4 )

HSP 1 Score: 115.5 bits (288), Expect = 2.6e-26
Identity = 65/141 (46.10%), Postives = 86/141 (60.99%), Query Frame = 0


Query: 5   VETTQFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGL------------- 64
           ++  + HVLAVDDS +DR +IERLL+ +S  VTAVDSG +ALEFLGL             
Sbjct: 29  LDLDEVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDNEKASAEFDRLK 88

Query: 65  -----------------------ESKSLKDIPVVIMSSENVPSRINRCLEEGAEEFFLKP 110
                                  ES + +++PVVIMSSENV +RI+RCLEEGA++F LKP
Sbjct: 89  VDLIITDYCMPGMTGYELLKKIKESSNFREVPVVIMSSENVLTRIDRCLEEGAQDFLLKP 148

[Close]

BLAST of Spg008416 vs. TAIR 10
Match: AT5G62920.1 (response regulator 6 )

HSP 1 Score: 112.5 bits (280), Expect = 2.2e-25
Identity = 63/129 (48.84%), Postives = 79/129 (61.24%), Query Frame = 0


Query: 11  HVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGL------------------- 70
           HVLAVDDS +DRK IERLL+ SS  VT VDS T+AL++LGL                   
Sbjct: 26  HVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDVEEKSVGFEDLKVNLIMT 85

Query: 71  -----------------ESKSLKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQLSDV 104
                            ES + +++PVVIMSSEN+  RI+RCLEEGAE+F LKPV+LSDV
Sbjct: 86  DYSMPGMTGYELLKKIKESSAFREVPVVIMSSENILPRIDRCLEEGAEDFLLKPVKLSDV 145

The following BLAST results are available for this feature:

BLAST of Spg008416 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7032635.1	1.5e-44	68.79	Two-component response regulator ARR9 [Cucurbita argyrosperma subsp. argyrosperm...	[more]
XP_022993798.1	1.7e-43	67.52	two-component response regulator ORR4-like [Cucurbita maxima]	[more]
XP_023550008.1	3.8e-43	67.31	two-component response regulator ORR4-like [Cucurbita pepo subsp. pepo]	[more]
XP_022938947.1	3.8e-43	66.25	two-component response regulator ORR4-like [Cucurbita moschata]	[more]
XP_038875323.1	6.4e-43	67.09	two-component response regulator ORR4-like [Benincasa hispida]	[more]

BLAST of Spg008416 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B8BLZ4	8.1e-33	54.79	Two-component response regulator ORR10 OS=Oryza sativa subsp. indica OX=39946 GN...	[more]
Q2QXY3	8.1e-33	54.79	Two-component response regulator ORR10 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q4GZK2	8.1e-33	54.79	Two-component response regulator ORR9 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]
Q2RAP3	8.1e-33	54.79	Two-component response regulator ORR9 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q4GZK7	2.0e-31	52.67	Two-component response regulator ORR4 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]

BLAST of Spg008416 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K3C0	8.2e-44	67.52	two-component response regulator ORR4-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1FFG9	1.8e-43	66.25	two-component response regulator ORR4-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1JQG8	5.3e-43	66.67	two-component response regulator ORR4-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1GPD5	5.3e-43	66.67	two-component response regulator ORR4-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A0A0KQE6	1.2e-42	67.31	Response regulatory domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_...	[more]

BLAST of Spg008416 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57040.1	1.9e-32	52.32	response regulator 9	[more]
AT2G41310.1	5.1e-30	50.70	response regulator 3	[more]
AT1G59940.1	8.9e-27	48.53	response regulator 3	[more]
AT1G10470.1	2.6e-26	46.10	response regulator 4	[more]
AT5G62920.1	2.2e-25	48.84	response regulator 6	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.2300		coord: 3..52 e-value: 2.1E-7 score: 32.6
None	No IPR available	GENE3D	3.40.50.2300		coord: 53..109 e-value: 1.8E-7 score: 32.8
None	No IPR available	PANTHER	PTHR43874	TWO-COMPONENT RESPONSE REGULATOR	coord: 3..52
None	No IPR available	PANTHER	PTHR43874:SF140	RESPONSE REGULATOR ARR8, PUTATIVE-RELATED	coord: 3..52
None	No IPR available	PANTHER	PTHR43874:SF140	RESPONSE REGULATOR ARR8, PUTATIVE-RELATED	coord: 54..107
None	No IPR available	PANTHER	PTHR43874	TWO-COMPONENT RESPONSE REGULATOR	coord: 54..107
IPR001789	Signal transduction response regulator, receiver domain	PROSITE	PS50110	RESPONSE_REGULATORY	coord: 11..109 score: 11.128622
IPR011006	CheY-like superfamily	SUPERFAMILY	52172	CheY-like	coord: 9..99

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg008416.1	Spg008416.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000160	phosphorelay signal transduction system