Spg008415 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg008415
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	psbQ-like protein 3, chloroplastic
Location	scaffold10: 33092902 .. 33093857 (-)
RNA-Seq Expression	Spg008415
Synteny	Spg008415

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAATTAAGCCCAATCTCAATCTCAAACCTCAGCAATCGCATCCATTTCTCTCCTTCTCCTACCACGATCTCCTTCCACTCATTCAAGATCACAGGCAATCGTTCTAACAAGTGCACAAACATTAGCAGAAGATTGGGGCTGGGATTGATAGCTTTAATGGCGTCGTCAGTAGCAACATCGCCGGTGAAAATGGCGACTGCTTTGGATCTGAAATTGATCGCGCCGGAGCAGAGTTTCGAGGAGGCCGAGAGCGGAATCAGAAGCCACGCAGAAGCGCTTTTGCAGGTTAGAGGTTTAATTGAATCGGAGTCTTGGAAGGAAGCTCAGAAGCAGTTGAGAAGCAGTTCGCCGCTGCTGAAACAGGATCTCTACACTATAATTGAATACAAACCGCCTGCCGAGCGACCTCCTCTCAGGAAACTGTACTCTGTTCTCTTCAACAATGTCACTCGAGTAAGTTTGATTGTTTGAAGCTCGTCAATGTCTCTAATATCCTTATGCGTTTGAAGTGAAATTACGAAGAATTTTGTTCTCTTCTTCTTTGAATTTGTTTTTATTTTTGGTTTTGGTGATCTGCAGATGGATTATGCAGCGAGAGATAAAGATGCAGAACGAGTTTGGCAGTGCTACAATAACATTGTGATGGCCATCTCTGACATTTTGTCCAGAATTTAGAAAGATAGATAAAGATTCTCGATTCTCAAGCCAATGAAATCTGGTAACTGCGCTATCCATTATGGTGTTCTTGGGTTGAGTTGGATCGGATTAATTTTTCTTTTCTTTTTTCTTTTTTCTTTTTAACCCATCTTAATTGTTTAGATTGTTCGACTCAGACAATTCTAGTTCATAATCAATCTAAGTATGAAATACTTGGACTGAATGGATTTGAATTGTTCTAAATTTTGTTAAAAGAACAAAAAACTAAAGAACATGTTAGTCCCTAAAACATT

mRNA sequence

ATGGCGGAATTAAGCCCAATCTCAATCTCAAACCTCAGCAATCGCATCCATTTCTCTCCTTCTCCTACCACGATCTCCTTCCACTCATTCAAGATCACAGGCAATCGTTCTAACAAGTGCACAAACATTAGCAGAAGATTGGGGCTGGGATTGATAGCTTTAATGGCGTCGTCAGTAGCAACATCGCCGGTGAAAATGGCGACTGCTTTGGATCTGAAATTGATCGCGCCGGAGCAGAGTTTCGAGGAGGCCGAGAGCGGAATCAGAAGCCACGCAGAAGCGCTTTTGCAGGTTAGAGGTTTAATTGAATCGGAGTCTTGGAAGGAAGCTCAGAAGCAGTTGAGAAGCAGTTCGCCGCTGCTGAAACAGGATCTCTACACTATAATTGAATACAAACCGCCTGCCGAGCGACCTCCTCTCAGGAAACTGTACTCTGTTCTCTTCAACAATGTCACTCGAATGGATTATGCAGCGAGAGATAAAGATGCAGAACGAGTTTGGCAGTGCTACAATAACATTGTGATGGCCATCTCTGACATTTTGTCCAGAATTTAG

Coding sequence (CDS)

ATGGCGGAATTAAGCCCAATCTCAATCTCAAACCTCAGCAATCGCATCCATTTCTCTCCTTCTCCTACCACGATCTCCTTCCACTCATTCAAGATCACAGGCAATCGTTCTAACAAGTGCACAAACATTAGCAGAAGATTGGGGCTGGGATTGATAGCTTTAATGGCGTCGTCAGTAGCAACATCGCCGGTGAAAATGGCGACTGCTTTGGATCTGAAATTGATCGCGCCGGAGCAGAGTTTCGAGGAGGCCGAGAGCGGAATCAGAAGCCACGCAGAAGCGCTTTTGCAGGTTAGAGGTTTAATTGAATCGGAGTCTTGGAAGGAAGCTCAGAAGCAGTTGAGAAGCAGTTCGCCGCTGCTGAAACAGGATCTCTACACTATAATTGAATACAAACCGCCTGCCGAGCGACCTCCTCTCAGGAAACTGTACTCTGTTCTCTTCAACAATGTCACTCGAATGGATTATGCAGCGAGAGATAAAGATGCAGAACGAGTTTGGCAGTGCTACAATAACATTGTGATGGCCATCTCTGACATTTTGTCCAGAATTTAG

Protein sequence

MAELSPISISNLSNRIHFSPSPTTISFHSFKITGNRSNKCTNISRRLGLGLIALMASSVATSPVKMATALDLKLIAPEQSFEEAESGIRSHAEALLQVRGLIESESWKEAQKQLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYNNIVMAISDILSRI

Homology

[Close]

BLAST of Spg008415 vs. NCBI nr
Match: XP_022991100.1 (psbQ-like protein 3, chloroplastic isoform X1 [Cucurbita maxima])

HSP 1 Score: 302.8 bits (774), Expect = 2.1e-78
Identity = 159/185 (85.95%), Postives = 169/185 (91.35%), Query Frame = 0


Query: 1   MAELSPISISNLSNRIHFSPSPTTISFHSFKITGNRSNKCTNISRRLGLGLIALMA-SSV 60
           MAELSPIS+SNLSNRIHFS SP  ISF  F IT  R + C +ISRRLGLG +ALMA SSV
Sbjct: 1   MAELSPISVSNLSNRIHFSSSPPIISFQLFSITAKRCSNCRSISRRLGLGFMALMASSSV 60

Query: 61  ATSPVKMATALDLKLIAPEQSFEEAESGIRSHAEALLQVRGLIESESWKEAQKQLRSSSP 120
           A++PVK+  ALDLKLIAPEQSFEEAESGIR HAEA+LQVRGLIESESWKEAQKQLRSSSP
Sbjct: 61  ASTPVKITNALDLKLIAPEQSFEEAESGIRGHAEAVLQVRGLIESESWKEAQKQLRSSSP 120

Query: 121 LLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYNNIVMAISD 180
           LLKQDLYTIIEYKPPAERPPLRKLYS+LFNNVTRMDYAARDKDAERVWQCY+NIVMAISD
Sbjct: 121 LLKQDLYTIIEYKPPAERPPLRKLYSLLFNNVTRMDYAARDKDAERVWQCYDNIVMAISD 180

Query: 181 ILSRI 185
           ILSRI
Sbjct: 181 ILSRI 185

[Close]

BLAST of Spg008415 vs. NCBI nr
Match: XP_023551782.1 (psbQ-like protein 3, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 292.7 bits (748), Expect = 2.2e-75
Identity = 160/190 (84.21%), Postives = 170/190 (89.47%), Query Frame = 0


Query: 1   MAELSPISISNLSNRIHF-SPSPTTISFHSFKITGNRSNKC----TNISRRLGLGLIALM 60
           MAELSPIS+SNLSNRIHF S SP  IS   F IT  R + C     +ISRRLGLGLIALM
Sbjct: 1   MAELSPISVSNLSNRIHFSSSSPPIISVQLFSITAKRCSNCRSISRSISRRLGLGLIALM 60

Query: 61  A-SSVATSPVKMATALDLKLIAPEQSFEEAESGIRSHAEALLQVRGLIESESWKEAQKQL 120
           A SSVA++PVK+A ALDLKLIAPEQSFEEAESGIR HAEA+LQVRGLIESESWKEAQKQL
Sbjct: 61  ASSSVASTPVKIANALDLKLIAPEQSFEEAESGIRGHAEAVLQVRGLIESESWKEAQKQL 120

Query: 121 RSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYNNIV 180
           RSSSPLLKQDLYTIIEYKPPAERPPLR+LYS+LFNNVTRMDYAARDKDAERVWQCY+NIV
Sbjct: 121 RSSSPLLKQDLYTIIEYKPPAERPPLRRLYSLLFNNVTRMDYAARDKDAERVWQCYDNIV 180

Query: 181 MAISDILSRI 185
           MAISDILSRI
Sbjct: 181 MAISDILSRI 190

[Close]

BLAST of Spg008415 vs. NCBI nr
Match: XP_022962345.1 (psbQ-like protein 3, chloroplastic isoform X1 [Cucurbita moschata])

HSP 1 Score: 288.9 bits (738), Expect = 3.1e-74
Identity = 157/186 (84.41%), Postives = 168/186 (90.32%), Query Frame = 0


Query: 1   MAELSPISISNLSNRIHF-SPSPTTISFHSFKITGNRSNKCTNISRRLGLGLIALMA-SS 60
           MAELSPIS+SNLSNRIHF S SP   S   F IT  R + C +ISRRLGLGLIALMA SS
Sbjct: 1   MAELSPISVSNLSNRIHFSSSSPPINSSQLFSITAKRCSNCRSISRRLGLGLIALMASSS 60

Query: 61  VATSPVKMATALDLKLIAPEQSFEEAESGIRSHAEALLQVRGLIESESWKEAQKQLRSSS 120
           VA++PV++A ALDLKLIAPEQSFEEAESGIR HAEA+LQVRGLIESESWKEAQKQLR+SS
Sbjct: 61  VASTPVRIANALDLKLIAPEQSFEEAESGIRGHAEAVLQVRGLIESESWKEAQKQLRTSS 120

Query: 121 PLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYNNIVMAIS 180
           PLLKQDLYTIIEYKPPAERPPLRKLYS+LFNNVTRMDYAARDKDAERV QCY+NIVMAIS
Sbjct: 121 PLLKQDLYTIIEYKPPAERPPLRKLYSLLFNNVTRMDYAARDKDAERVRQCYDNIVMAIS 180

Query: 181 DILSRI 185
           DILSRI
Sbjct: 181 DILSRI 186

[Close]

BLAST of Spg008415 vs. NCBI nr
Match: KAG7032694.1 (PsbQ-like protein 3, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 286.6 bits (732), Expect = 1.5e-73
Identity = 156/186 (83.87%), Postives = 167/186 (89.78%), Query Frame = 0


Query: 1   MAELSPISISNLSNRIHF-SPSPTTISFHSFKITGNRSNKCTNISRRLGLGLIALMA-SS 60
           MAELSPIS+SNLSNRIHF S SP   S   F IT  R + C +ISRRLGLGLIALMA SS
Sbjct: 1   MAELSPISVSNLSNRIHFSSSSPPINSSQLFSITAKRCSNCRSISRRLGLGLIALMASSS 60

Query: 61  VATSPVKMATALDLKLIAPEQSFEEAESGIRSHAEALLQVRGLIESESWKEAQKQLRSSS 120
           VA++PV++A ALDLKLIAPEQSFEEAESGIR HAEA+LQVRGLIESESWKEAQKQLR+SS
Sbjct: 61  VASTPVRIANALDLKLIAPEQSFEEAESGIRGHAEAVLQVRGLIESESWKEAQKQLRTSS 120

Query: 121 PLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYNNIVMAIS 180
           PLLKQDLYTIIEYKPPAERPPLRKLYS+LFNNVTRMDYAARDKDAERV QCY+NI MAIS
Sbjct: 121 PLLKQDLYTIIEYKPPAERPPLRKLYSLLFNNVTRMDYAARDKDAERVRQCYDNIEMAIS 180

Query: 181 DILSRI 185
           DILSRI
Sbjct: 181 DILSRI 186

[Close]

BLAST of Spg008415 vs. NCBI nr
Match: KAG6601995.1 (Auxin response factor 8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 283.9 bits (725), Expect = 1.0e-72
Identity = 154/186 (82.80%), Postives = 166/186 (89.25%), Query Frame = 0


Query: 1   MAELSPISISNLSNRIHF-SPSPTTISFHSFKITGNRSNKCTNISRRLGLGLIALMA-SS 60
           MAELSPIS+SNLSNRIHF S SP   S   F IT  R + C +ISRRLGLGLIAL+A SS
Sbjct: 509 MAELSPISVSNLSNRIHFSSSSPPINSSQLFSITAKRCSNCRSISRRLGLGLIALLASSS 568

Query: 61  VATSPVKMATALDLKLIAPEQSFEEAESGIRSHAEALLQVRGLIESESWKEAQKQLRSSS 120
           VA++PV++A ALDLKLIAPEQSFEEAESGIR HAEA+LQVRGLIESESWKEAQKQLR+SS
Sbjct: 569 VASTPVRIANALDLKLIAPEQSFEEAESGIRGHAEAVLQVRGLIESESWKEAQKQLRTSS 628

Query: 121 PLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYNNIVMAIS 180
           PLLKQDLYTIIEYKPP ERPPLRKLYS+LFNNVTRMDYAARDKDAERV QCY+NI MAIS
Sbjct: 629 PLLKQDLYTIIEYKPPVERPPLRKLYSLLFNNVTRMDYAARDKDAERVRQCYDNIEMAIS 688

Query: 181 DILSRI 185
           DILSRI
Sbjct: 689 DILSRI 694

[Close]

BLAST of Spg008415 vs. ExPASy Swiss-Prot
Match: Q2V4B2 (PsbQ-like protein 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PQL3 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 6.4e-22
Identity = 53/109 (48.62%), Postives = 75/109 (68.81%), Query Frame = 0


Query: 77  PEQSFEEAESGIRSHAEALLQVRG-LIESESWKEAQKQLRSSSPLLKQDLYTIIEYKPPA 136
           PE++ E A+ G+R +AE + +++  +IE + WKE  K+LR S+  +KQD Y II+ KPP 
Sbjct: 79  PERTVELAQEGLRKNAENIKRIKEIMIEKKLWKEGGKELRRSASNMKQDFYLIIQAKPPK 138

Query: 137 ERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYNNIVMAISDILSRI 185
           +RP  R LYS LFN++T+MDYAARD D  +V + Y NIV  + DI  RI
Sbjct: 139 DRPLFRSLYSSLFNSITKMDYAARDGDETKVLEYYINIVAILDDIFPRI 187

[Close]

BLAST of Spg008415 vs. ExPASy TrEMBL
Match: A0A6J1JRX6 (psbQ-like protein 3, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487796 PE=3 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 1.0e-78
Identity = 159/185 (85.95%), Postives = 169/185 (91.35%), Query Frame = 0


Query: 1   MAELSPISISNLSNRIHFSPSPTTISFHSFKITGNRSNKCTNISRRLGLGLIALMA-SSV 60
           MAELSPIS+SNLSNRIHFS SP  ISF  F IT  R + C +ISRRLGLG +ALMA SSV
Sbjct: 1   MAELSPISVSNLSNRIHFSSSPPIISFQLFSITAKRCSNCRSISRRLGLGFMALMASSSV 60

Query: 61  ATSPVKMATALDLKLIAPEQSFEEAESGIRSHAEALLQVRGLIESESWKEAQKQLRSSSP 120
           A++PVK+  ALDLKLIAPEQSFEEAESGIR HAEA+LQVRGLIESESWKEAQKQLRSSSP
Sbjct: 61  ASTPVKITNALDLKLIAPEQSFEEAESGIRGHAEAVLQVRGLIESESWKEAQKQLRSSSP 120

Query: 121 LLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYNNIVMAISD 180
           LLKQDLYTIIEYKPPAERPPLRKLYS+LFNNVTRMDYAARDKDAERVWQCY+NIVMAISD
Sbjct: 121 LLKQDLYTIIEYKPPAERPPLRKLYSLLFNNVTRMDYAARDKDAERVWQCYDNIVMAISD 180

Query: 181 ILSRI 185
           ILSRI
Sbjct: 181 ILSRI 185

[Close]

BLAST of Spg008415 vs. ExPASy TrEMBL
Match: A0A6J1HES6 (psbQ-like protein 3, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462819 PE=3 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.5e-74
Identity = 157/186 (84.41%), Postives = 168/186 (90.32%), Query Frame = 0


Query: 1   MAELSPISISNLSNRIHF-SPSPTTISFHSFKITGNRSNKCTNISRRLGLGLIALMA-SS 60
           MAELSPIS+SNLSNRIHF S SP   S   F IT  R + C +ISRRLGLGLIALMA SS
Sbjct: 1   MAELSPISVSNLSNRIHFSSSSPPINSSQLFSITAKRCSNCRSISRRLGLGLIALMASSS 60

Query: 61  VATSPVKMATALDLKLIAPEQSFEEAESGIRSHAEALLQVRGLIESESWKEAQKQLRSSS 120
           VA++PV++A ALDLKLIAPEQSFEEAESGIR HAEA+LQVRGLIESESWKEAQKQLR+SS
Sbjct: 61  VASTPVRIANALDLKLIAPEQSFEEAESGIRGHAEAVLQVRGLIESESWKEAQKQLRTSS 120

Query: 121 PLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYNNIVMAIS 180
           PLLKQDLYTIIEYKPPAERPPLRKLYS+LFNNVTRMDYAARDKDAERV QCY+NIVMAIS
Sbjct: 121 PLLKQDLYTIIEYKPPAERPPLRKLYSLLFNNVTRMDYAARDKDAERVRQCYDNIVMAIS 180

Query: 181 DILSRI 185
           DILSRI
Sbjct: 181 DILSRI 186

[Close]

BLAST of Spg008415 vs. ExPASy TrEMBL
Match: A0A0A0KT23 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G315360 PE=3 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 9.5e-69
Identity = 144/184 (78.26%), Postives = 156/184 (84.78%), Query Frame = 0


Query: 1   MAELSPISISNLSNRIHFSPSPTTISFHSFKITGNRSNKCTNISRRLGLGLIALMASSVA 60
           MA+L PIS+SNL+NRIHFS SP TISF SF  T N SN  TNISRRLGLG IALMASSV 
Sbjct: 1   MAKLIPISLSNLTNRIHFSYSPLTISFPSFNTTPNCSNNATNISRRLGLGFIALMASSVT 60

Query: 61  TSPVKMATALDLKLIAPEQSFEEAESGIRSHAEALLQVRGLIESESWKEAQKQLRSSSPL 120
             P ++A ALDLKLIAPEQS +EAESGIR HAEALLQVR LIESE+WKEAQK+LRS+S L
Sbjct: 61  AIPAEVANALDLKLIAPEQSLDEAESGIRRHAEALLQVRSLIESEAWKEAQKRLRSTSAL 120

Query: 121 LKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYNNIVMAISDI 180
           LKQDLYTIIEYKPPAERP LRKLYS+LFNNVTRMDYAARDKD   VW+ Y  + MAISDI
Sbjct: 121 LKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDVGGVWESYKKMEMAISDI 180

Query: 181 LSRI 185
           LSRI
Sbjct: 181 LSRI 184

[Close]

BLAST of Spg008415 vs. ExPASy TrEMBL
Match: A0A5A7VLN5 (PsbQ-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold871G00050 PE=3 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 2.0e-66
Identity = 140/184 (76.09%), Postives = 154/184 (83.70%), Query Frame = 0


Query: 1   MAELSPISISNLSNRIHFSPSPTTISFHSFKITGNRSNKCTNISRRLGLGLIALMASSVA 60
           MA+L PIS+SNL+NRIHFS SP TISF SF  T N S    NISRRLGLG IALMASSV 
Sbjct: 1   MAKLIPISLSNLTNRIHFSSSPLTISFQSFNTTPNCSKNAKNISRRLGLGFIALMASSVT 60

Query: 61  TSPVKMATALDLKLIAPEQSFEEAESGIRSHAEALLQVRGLIESESWKEAQKQLRSSSPL 120
             P ++A AL+LKLIAPEQS +EAE GIR HAEALLQVR L+ESE+WKEAQK+LRS+S L
Sbjct: 61  AIPAEVANALNLKLIAPEQSLDEAERGIRGHAEALLQVRSLMESEAWKEAQKRLRSTSAL 120

Query: 121 LKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYNNIVMAISDI 180
           LKQDLYTIIEYKPPAERP LRKLYS+LFNNVTRMDYAARDKDA  V +CY  + MAISDI
Sbjct: 121 LKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDAGGVRECYKKMEMAISDI 180

Query: 181 LSRI 185
           LSRI
Sbjct: 181 LSRI 184

[Close]

BLAST of Spg008415 vs. ExPASy TrEMBL
Match: A0A1S3CIJ1 (psbQ-like protein 3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501351 PE=3 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 2.0e-66
Identity = 140/184 (76.09%), Postives = 154/184 (83.70%), Query Frame = 0


Query: 1   MAELSPISISNLSNRIHFSPSPTTISFHSFKITGNRSNKCTNISRRLGLGLIALMASSVA 60
           MA+L PIS+SNL+NRIHFS SP TISF SF  T N S    NISRRLGLG IALMASSV 
Sbjct: 1   MAKLIPISLSNLTNRIHFSSSPLTISFQSFNTTPNCSKNAKNISRRLGLGFIALMASSVT 60

Query: 61  TSPVKMATALDLKLIAPEQSFEEAESGIRSHAEALLQVRGLIESESWKEAQKQLRSSSPL 120
             P ++A AL+LKLIAPEQS +EAE GIR HAEALLQVR L+ESE+WKEAQK+LRS+S L
Sbjct: 61  AIPAEVANALNLKLIAPEQSLDEAERGIRGHAEALLQVRSLMESEAWKEAQKRLRSTSAL 120

Query: 121 LKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYNNIVMAISDI 180
           LKQDLYTIIEYKPPAERP LRKLYS+LFNNVTRMDYAARDKDA  V +CY  + MAISDI
Sbjct: 121 LKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDAGGVRECYKKMEMAISDI 180

Query: 181 LSRI 185
           LSRI
Sbjct: 181 LSRI 184

[Close]

BLAST of Spg008415 vs. TAIR 10
Match: AT2G01918.1 (PsbQ-like 3 )

HSP 1 Score: 105.5 bits (262), Expect = 4.5e-23
Identity = 53/109 (48.62%), Postives = 75/109 (68.81%), Query Frame = 0


Query: 77  PEQSFEEAESGIRSHAEALLQVRG-LIESESWKEAQKQLRSSSPLLKQDLYTIIEYKPPA 136
           PE++ E A+ G+R +AE + +++  +IE + WKE  K+LR S+  +KQD Y II+ KPP 
Sbjct: 79  PERTVELAQEGLRKNAENIKRIKEIMIEKKLWKEGGKELRRSASNMKQDFYLIIQAKPPK 138

Query: 137 ERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYNNIVMAISDILSRI 185
           +RP  R LYS LFN++T+MDYAARD D  +V + Y NIV  + DI  RI
Sbjct: 139 DRPLFRSLYSSLFNSITKMDYAARDGDETKVLEYYINIVAILDDIFPRI 187

[Close]

BLAST of Spg008415 vs. TAIR 10
Match: AT3G01440.1 (PsbQ-like 1 )

HSP 1 Score: 43.9 bits (102), Expect = 1.6e-04
Identity = 24/97 (24.74%), Postives = 48/97 (49.48%), Query Frame = 0


Query: 88  IRSHAEALLQVRGLIESESWKEAQKQLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVL 147
           ++ +A  LL +  LI  ++    +K LR  S  L  D   +I      ++ PL  L + L
Sbjct: 123 VKKNAFDLLAMEDLIGPDTLNYVKKYLRLKSTFLFYDFDNLISAAASEDKQPLTDLANRL 182

Query: 148 FNNVTRMDYAARDKDAERVWQCYNNIVMAISDILSRI 185
           F+N  +++ AA+ K+      CY +    + ++++R+
Sbjct: 183 FDNFEKLEDAAKTKNLAETESCYKDTKFLLQEVMTRM 219

The following BLAST results are available for this feature:

BLAST of Spg008415 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022991100.1	2.1e-78	85.95	psbQ-like protein 3, chloroplastic isoform X1 [Cucurbita maxima]	[more]
XP_023551782.1	2.2e-75	84.21	psbQ-like protein 3, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_022962345.1	3.1e-74	84.41	psbQ-like protein 3, chloroplastic isoform X1 [Cucurbita moschata]	[more]
KAG7032694.1	1.5e-73	83.87	PsbQ-like protein 3, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6601995.1	1.0e-72	82.80	Auxin response factor 8, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Spg008415 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2V4B2	6.4e-22	48.62	PsbQ-like protein 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PQL3 PE=2 ...	[more]

BLAST of Spg008415 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JRX6	1.0e-78	85.95	psbQ-like protein 3, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1HES6	1.5e-74	84.41	psbQ-like protein 3, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A0A0KT23	9.5e-69	78.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G315360 PE=3 SV=1	[more]
A0A5A7VLN5	2.0e-66	76.09	PsbQ-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold871G...	[more]
A0A1S3CIJ1	2.0e-66	76.09	psbQ-like protein 3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501351 PE=3 ...	[more]

BLAST of Spg008415 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01918.1	4.5e-23	48.62	PsbQ-like 3	[more]
AT3G01440.1	1.6e-04	24.74	PsbQ-like 1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023222	PsbQ-like domain superfamily	GENE3D	1.20.120.290		coord: 54..184 e-value: 4.6E-34 score: 119.6
IPR023222	PsbQ-like domain superfamily	SUPERFAMILY	101112	Oxygen-evolving enhancer protein 3,	coord: 77..184
IPR008797	Oxygen-evolving enhancer protein 3	PFAM	PF05757	PsbQ	coord: 78..183 e-value: 8.8E-20 score: 71.3
IPR008797	Oxygen-evolving enhancer protein 3	PANTHER	PTHR33399	OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC	coord: 27..184
None	No IPR available	PANTHER	PTHR33399:SF6	PSBQ-LIKE PROTEIN 3, CHLOROPLASTIC	coord: 27..184

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg008415.1	Spg008415.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
biological_process	GO:0009767	photosynthetic electron transport chain
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0019898	extrinsic component of membrane
cellular_component	GO:0009654	photosystem II oxygen evolving complex
cellular_component	GO:0009523	photosystem II
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity