Spg008391 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg008391
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	geranylgeranyl pyrophosphate synthase, chloroplastic-like
Location	scaffold10: 33800475 .. 33800861 (+)
RNA-Seq Expression	Spg008391
Synteny	Spg008391

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGTTGCCAAAGCTTTGTTTGGATTTCATCCTTTGAGGTCACTCAACAATGGCTTCAAAAGCAACCAAAGAAGAACAACATTTGCCAAAGCTGAAGCCTTTAATGTATTCACCGACATAGAGAAGTACTCATTGAAGAATAACAATGATCCTTCTTTGCCTAAGTTTGAATTCAAAGACTACTTGAGCTCCAAGATAAAGCGAGTGAATGAGGCTTTGGATCAAACAGTGCCATTGCAGCACCCTACGCAGATCCATGAGGCCATGAGATACTCTCTTTTGTTGTCTGGAAAGCGCTTTCGCCCCGTTCTTTGCCTTGCGTCGTGTGAGCTCATCGGTGGAGACAAGCTCAAGCCATGCCCGTTGCTTGCGCCATTGAAATGA

mRNA sequence

ATGGCAGTTGCCAAAGCTTTGTTTGGATTTCATCCTTTGAGGTCACTCAACAATGGCTTCAAAAGCAACCAAAGAAGAACAACATTTGCCAAAGCTGAAGCCTTTAATGTATTCACCGACATAGAGAAGTACTCATTGAAGAATAACAATGATCCTTCTTTGCCTAAGTTTGAATTCAAAGACTACTTGAGCTCCAAGATAAAGCGAGTGAATGAGGCTTTGGATCAAACAGTGCCATTGCAGCACCCTACGCAGATCCATGAGGCCATGAGATACTCTCTTTTGTTGTCTGGAAAGCGCTTTCGCCCCGTTCTTTGCCTTGCGTCGTGTGAGCTCATCGGTGGAGACAAGCTCAAGCCATGCCCGTTGCTTGCGCCATTGAAATGA

Coding sequence (CDS)

ATGGCAGTTGCCAAAGCTTTGTTTGGATTTCATCCTTTGAGGTCACTCAACAATGGCTTCAAAAGCAACCAAAGAAGAACAACATTTGCCAAAGCTGAAGCCTTTAATGTATTCACCGACATAGAGAAGTACTCATTGAAGAATAACAATGATCCTTCTTTGCCTAAGTTTGAATTCAAAGACTACTTGAGCTCCAAGATAAAGCGAGTGAATGAGGCTTTGGATCAAACAGTGCCATTGCAGCACCCTACGCAGATCCATGAGGCCATGAGATACTCTCTTTTGTTGTCTGGAAAGCGCTTTCGCCCCGTTCTTTGCCTTGCGTCGTGTGAGCTCATCGGTGGAGACAAGCTCAAGCCATGCCCGTTGCTTGCGCCATTGAAATGA

Protein sequence

MAVAKALFGFHPLRSLNNGFKSNQRRTTFAKAEAFNVFTDIEKYSLKNNNDPSLPKFEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASCELIGGDKLKPCPLLAPLK

Homology

[Close]

BLAST of Spg008391 vs. NCBI nr
Match: QFU96147.1 (geranylgeranyl diphosphate synthase 8 [Tripterygium wilfordii])

HSP 1 Score: 106.7 bits (265), Expect = 1.5e-19
Identity = 54/117 (46.15%), Postives = 77/117 (65.81%), Query Frame = 0


Query: 13  LRSLNNGFKSNQRRTTF-AKAEAFNVFTDIEKYSLKNNNDPSLPKFEFKDYLSSKIKRVN 72
           L+ L+NG K   R     AK     +     +  +  + +PSL +F+F +Y+SSK ++VN
Sbjct: 16  LKRLSNGRKDLFRAPFHQAKLVPMRIHATHVEELIPRSQNPSLGRFQFDEYMSSKAEKVN 75

Query: 73  EALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASCELIGGDKLKPCPLLAPLK 129
           +ALD+ VPL+HP +IHEAMRYSLL  GKR RPVLC+ASCEL+GGD+    P+   ++
Sbjct: 76  KALDEAVPLKHPQKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPMACAME 132

[Close]

BLAST of Spg008391 vs. NCBI nr
Match: XP_038701796.1 (geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic-like [Tripterygium wilfordii])

HSP 1 Score: 106.7 bits (265), Expect = 1.5e-19
Identity = 54/117 (46.15%), Postives = 77/117 (65.81%), Query Frame = 0


Query: 13  LRSLNNGFKSNQRRTTF-AKAEAFNVFTDIEKYSLKNNNDPSLPKFEFKDYLSSKIKRVN 72
           L+ L+NG K   R     AK     +     +  +  + +PSL +F+F +Y+SSK ++VN
Sbjct: 16  LKRLSNGRKDLFRAPFHQAKLVPMRIHATHVEELIPRSQNPSLGRFQFDEYMSSKAEKVN 75

Query: 73  EALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASCELIGGDKLKPCPLLAPLK 129
           +ALD+ VPL+HP +IHEAMRYSLL  GKR RPVLC+ASCEL+GGD+    P+   ++
Sbjct: 76  KALDEAVPLKHPQKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPMACAME 132

[Close]

BLAST of Spg008391 vs. NCBI nr
Match: XP_006482126.1 (geranylgeranyl pyrophosphate synthase 7, chloroplastic-like [Citrus sinensis])

HSP 1 Score: 106.3 bits (264), Expect = 2.0e-19
Identity = 48/77 (62.34%), Postives = 62/77 (80.52%), Query Frame = 0


Query: 52  PSLPKFEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASCE 111
           P LP F+F++Y++SK KRVN+ALD+TV L+HP +IHEAMRYSLL  GKR RPVLC+ASCE
Sbjct: 67  PPLPIFQFEEYMTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCE 126

Query: 112 LIGGDKLKPCPLLAPLK 129
           L+GGD+    P+   L+
Sbjct: 127 LVGGDESSAMPVACALE 143

[Close]

BLAST of Spg008391 vs. NCBI nr
Match: GAY43756.1 (hypothetical protein CUMW_076950 [Citrus unshiu])

HSP 1 Score: 106.3 bits (264), Expect = 2.0e-19
Identity = 48/77 (62.34%), Postives = 62/77 (80.52%), Query Frame = 0


Query: 52  PSLPKFEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASCE 111
           P LP F+F++Y++SK KRVN+ALD+TV L+HP +IHEAMRYSLL  GKR RPVLC+ASCE
Sbjct: 67  PPLPIFQFEEYMTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCE 126

Query: 112 LIGGDKLKPCPLLAPLK 129
           L+GGD+    P+   L+
Sbjct: 127 LVGGDESSAMPVACALE 143

[Close]

BLAST of Spg008391 vs. NCBI nr
Match: XP_006430612.1 (geranylgeranyl pyrophosphate synthase 7, chloroplastic [Citrus clementina] >ESR43852.1 hypothetical protein CICLE_v10013734mg [Citrus clementina])

HSP 1 Score: 106.3 bits (264), Expect = 2.0e-19
Identity = 48/77 (62.34%), Postives = 62/77 (80.52%), Query Frame = 0


Query: 52  PSLPKFEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASCE 111
           P LP F+F++Y++SK KRVN+ALD+TV L+HP +IHEAMRYSLL  GKR RPVLC+ASCE
Sbjct: 67  PPLPIFQFEEYMTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCE 126

Query: 112 LIGGDKLKPCPLLAPLK 129
           L+GGD+    P+   L+
Sbjct: 127 LVGGDESSAMPVACALE 143

[Close]

BLAST of Spg008391 vs. ExPASy Swiss-Prot
Match: Q94ID7 (Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Hevea brasiliensis OX=3981 GN=GGPS PE=1 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.3e-18
Identity = 48/113 (42.48%), Postives = 67/113 (59.29%), Query Frame = 0


Query: 10  FHPLRSLNNGFKSNQRRTTFAKAEAFNVFTDIEKYSLKNNNDPSLPKFEFKDYLSSKIKR 69
           F+PL+SL   F   +     +   A  + T  E+   +  N+P  P F+FK Y+  K   
Sbjct: 33  FNPLKSLAISFAYRKSERPISSVSA--IITKEEETLQEEQNNPP-PSFDFKSYMLQKGNS 92

Query: 70  VNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASCELIGGDKLKPCP 123
           +N+AL+  +PLQ P +IHE+MRYSLL  GKR RP LCLA+CEL+GG+     P
Sbjct: 93  INQALEAAIPLQEPAKIHESMRYSLLAGGKRVRPALCLAACELVGGNDSMAMP 142

[Close]

BLAST of Spg008391 vs. ExPASy Swiss-Prot
Match: Q43133 (Geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic OS=Sinapis alba OX=3728 GN=GGPS1 PE=1 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.6e-16
Identity = 41/75 (54.67%), Postives = 51/75 (68.00%), Query Frame = 0


Query: 48  NNNDPSLPKFEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCL 107
           NN   S   F+F  Y+  K   VN+ALD  VPL+ P +IHEAMRYSLL  GKR RPVLC+
Sbjct: 61  NNLKSSSSSFDFMSYIIRKADSVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCI 120

Query: 108 ASCELIGGDKLKPCP 123
           A+CEL+GG++    P
Sbjct: 121 AACELVGGEESLAMP 135

[Close]

BLAST of Spg008391 vs. ExPASy Swiss-Prot
Match: A0A0U3BRC5 (Geranylfarnesyl diphosphate synthase, chloroplastic OS=Leucosceptrum canum OX=694369 GN=GFDPS PE=1 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 3.7e-16
Identity = 39/73 (53.42%), Postives = 53/73 (72.60%), Query Frame = 0


Query: 56  KFEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASCELIGG 115
           +F+FK Y+  KI  VN+ALD  +P++ P +IHEAMRYSLLL GKR  P++CLA+C L+GG
Sbjct: 68  QFDFKAYMLEKITAVNQALDAALPVREPVKIHEAMRYSLLLGGKRICPIVCLAACHLVGG 127

Query: 116 DKLKPCPLLAPLK 129
           D+    P  A L+
Sbjct: 128 DESTAMPSAAALE 140

[Close]

BLAST of Spg008391 vs. ExPASy Swiss-Prot
Match: P34802 (Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GGPPS1 PE=1 SV=2)

HSP 1 Score: 85.9 bits (211), Expect = 3.7e-16
Identity = 40/73 (54.79%), Postives = 54/73 (73.97%), Query Frame = 0


Query: 50  NDPSLPKFEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLAS 109
           ++PS   F+F  Y+ +K + VN+ALD  VPL+ P +IHEAMRYSLL  GKR RPVLC+A+
Sbjct: 69  SEPS--SFDFMSYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAA 128

Query: 110 CELIGGDKLKPCP 123
           CEL+GG++    P
Sbjct: 129 CELVGGEESTAMP 139

[Close]

BLAST of Spg008391 vs. ExPASy Swiss-Prot
Match: Q9SLG2 (Geranylgeranyl pyrophosphate synthase 4 OS=Arabidopsis thaliana OX=3702 GN=GGPP4 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 4.8e-16
Identity = 45/105 (42.86%), Postives = 63/105 (60.00%), Query Frame = 0


Query: 13  LRSLNNGFKSNQRRTTFAKAEAFNVFTDIEKYSLKNNNDPSLPKFEFKDYLSSKIKRVNE 72
           +R L+   KS      FA+ +    F D     L N  D     F+FK Y+ SK + +N 
Sbjct: 37  IRLLHIPIKSPVAAAIFARKDT-REFLD-SSIKLVNEEDDFGFSFDFKPYMISKAETINR 96

Query: 73  ALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASCELIGGDK 118
           ALD+ +PL  P  IH+AMRY++L  GKR RP+LCLA+CEL+GG++
Sbjct: 97  ALDEAIPLIEPLNIHKAMRYAILAGGKRVRPILCLAACELVGGEE 139

[Close]

BLAST of Spg008391 vs. ExPASy TrEMBL
Match: A0A5P9Q552 (Geranylgeranyl diphosphate synthase 8 OS=Tripterygium wilfordii OX=458696 GN=GGPPS8 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 7.4e-20
Identity = 54/117 (46.15%), Postives = 77/117 (65.81%), Query Frame = 0


Query: 13  LRSLNNGFKSNQRRTTF-AKAEAFNVFTDIEKYSLKNNNDPSLPKFEFKDYLSSKIKRVN 72
           L+ L+NG K   R     AK     +     +  +  + +PSL +F+F +Y+SSK ++VN
Sbjct: 16  LKRLSNGRKDLFRAPFHQAKLVPMRIHATHVEELIPRSQNPSLGRFQFDEYMSSKAEKVN 75

Query: 73  EALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASCELIGGDKLKPCPLLAPLK 129
           +ALD+ VPL+HP +IHEAMRYSLL  GKR RPVLC+ASCEL+GGD+    P+   ++
Sbjct: 76  KALDEAVPLKHPQKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPMACAME 132

[Close]

BLAST of Spg008391 vs. ExPASy TrEMBL
Match: V4ST05 (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10013734mg PE=3 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 9.6e-20
Identity = 48/77 (62.34%), Postives = 62/77 (80.52%), Query Frame = 0


Query: 52  PSLPKFEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASCE 111
           P LP F+F++Y++SK KRVN+ALD+TV L+HP +IHEAMRYSLL  GKR RPVLC+ASCE
Sbjct: 67  PPLPIFQFEEYMTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCE 126

Query: 112 LIGGDKLKPCPLLAPLK 129
           L+GGD+    P+   L+
Sbjct: 127 LVGGDESSAMPVACALE 143

[Close]

BLAST of Spg008391 vs. ExPASy TrEMBL
Match: A0A2H5NUF2 (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_076950 PE=3 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 9.6e-20
Identity = 48/77 (62.34%), Postives = 62/77 (80.52%), Query Frame = 0


Query: 52  PSLPKFEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASCE 111
           P LP F+F++Y++SK KRVN+ALD+TV L+HP +IHEAMRYSLL  GKR RPVLC+ASCE
Sbjct: 67  PPLPIFQFEEYMTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCE 126

Query: 112 LIGGDKLKPCPLLAPLK 129
           L+GGD+    P+   L+
Sbjct: 127 LVGGDESSAMPVACALE 143

[Close]

BLAST of Spg008391 vs. ExPASy TrEMBL
Match: A0A140CWP4 (Geranylgeranyl diphosphate synthase OS=Bixa orellana OX=66672 GN=GGDS PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 3.7e-19
Identity = 54/118 (45.76%), Postives = 75/118 (63.56%), Query Frame = 0


Query: 10  FHPLRSL-----NNGFKSNQRRTTFAKAEAFNVFTDIEKYSLKNNNDPSLPKFEFKDYLS 69
           F+PLR+L     ++   + +RR   +    ++V T  ++ +LK   DP  P F+FK Y+ 
Sbjct: 35  FNPLRTLTLPLASSSSSNTKRRPVCSVPSIYSVLT--KEDTLKEEQDPQKPSFDFKSYML 94

Query: 70  SKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASCELIGGDKLKPCP 123
           +K   VN+ALD  VPL+ P +IHEAMRYSLL  GKR RPVLCLA+CEL+GG +    P
Sbjct: 95  TKADAVNQALDAAVPLREPLKIHEAMRYSLLAGGKRVRPVLCLAACELVGGQESTAMP 150

[Close]

BLAST of Spg008391 vs. ExPASy TrEMBL
Match: A0A7J9FR19 (Uncharacterized protein OS=Gossypium trilobum OX=34281 GN=Gotri_026735 PE=3 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 3.7e-19
Identity = 52/121 (42.98%), Postives = 76/121 (62.81%), Query Frame = 0


Query: 8   FGFHPLRSLNNGFKSNQRRTTFAKAEAFNVFTDIEKYSLKNNNDPSLPKFEFKDYLSSKI 67
           F F+PL+++++   S  +R +F    + ++    E   L+ + DP LP F+FK ++  K 
Sbjct: 33  FPFNPLKNISS---STPKRRSFTSLPSISLVLTKEDAVLEEDQDPQLPSFDFKSFMVHKG 92

Query: 68  KRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASCELIGGDKLKPCPLLAPL 127
             VN+ALD  VPL+ P +IHEAMRYSLL  GKR RPVLCLA+C+L+GG +    P    L
Sbjct: 93  NAVNQALDSAVPLRDPVKIHEAMRYSLLAGGKRVRPVLCLAACDLVGGKESMVMPAACAL 150

Query: 128 K 129
           +
Sbjct: 153 E 150

[Close]

BLAST of Spg008391 vs. TAIR 10
Match: AT4G36810.1 (geranylgeranyl pyrophosphate synthase 1 )

HSP 1 Score: 85.9 bits (211), Expect = 2.6e-17
Identity = 40/73 (54.79%), Postives = 54/73 (73.97%), Query Frame = 0


Query: 50  NDPSLPKFEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLAS 109
           ++PS   F+F  Y+ +K + VN+ALD  VPL+ P +IHEAMRYSLL  GKR RPVLC+A+
Sbjct: 69  SEPS--SFDFMSYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAA 128

Query: 110 CELIGGDKLKPCP 123
           CEL+GG++    P
Sbjct: 129 CELVGGEESTAMP 139

[Close]

BLAST of Spg008391 vs. TAIR 10
Match: AT2G18640.1 (geranylgeranyl pyrophosphate synthase 4 )

HSP 1 Score: 85.5 bits (210), Expect = 3.4e-17
Identity = 45/105 (42.86%), Postives = 63/105 (60.00%), Query Frame = 0


Query: 13  LRSLNNGFKSNQRRTTFAKAEAFNVFTDIEKYSLKNNNDPSLPKFEFKDYLSSKIKRVNE 72
           +R L+   KS      FA+ +    F D     L N  D     F+FK Y+ SK + +N 
Sbjct: 37  IRLLHIPIKSPVAAAIFARKDT-REFLD-SSIKLVNEEDDFGFSFDFKPYMISKAETINR 96

Query: 73  ALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASCELIGGDK 118
           ALD+ +PL  P  IH+AMRY++L  GKR RP+LCLA+CEL+GG++
Sbjct: 97  ALDEAIPLIEPLNIHKAMRYAILAGGKRVRPILCLAACELVGGEE 139

[Close]

BLAST of Spg008391 vs. TAIR 10
Match: AT2G23800.1 (geranylgeranyl pyrophosphate synthase 2 )

HSP 1 Score: 83.6 bits (205), Expect = 1.3e-16
Identity = 36/66 (54.55%), Postives = 50/66 (75.76%), Query Frame = 0


Query: 57  FEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASCELIGGD 116
           FEF  Y+ SK + VN+AL++ +P+  P +IHEAMRY++L +GKR RP+LCLASCEL+GG 
Sbjct: 83  FEFDPYMMSKAESVNKALEEAIPVGEPLKIHEAMRYAILAAGKRVRPILCLASCELVGGQ 142

Query: 117 KLKPCP 123
           +    P
Sbjct: 143 ENAAMP 148

[Close]

BLAST of Spg008391 vs. TAIR 10
Match: AT2G18620.1 (Terpenoid synthases superfamily protein )

HSP 1 Score: 81.3 bits (199), Expect = 6.4e-16
Identity = 37/66 (56.06%), Postives = 47/66 (71.21%), Query Frame = 0


Query: 57  FEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASCELIGGD 116
           F+F  Y+  K   VNEALD  V L+ P +IHEA+RYSLL  GKR RPVLC+A+CEL+GG+
Sbjct: 53  FDFTSYMIGKANAVNEALDSAVSLREPIKIHEAIRYSLLARGKRVRPVLCIAACELVGGE 112

Query: 117 KLKPCP 123
           +    P
Sbjct: 113 ESVALP 118

[Close]

BLAST of Spg008391 vs. TAIR 10
Match: AT3G14530.1 (Terpenoid synthases superfamily protein )

HSP 1 Score: 79.0 bits (193), Expect = 3.2e-15
Identity = 41/97 (42.27%), Postives = 59/97 (60.82%), Query Frame = 0


Query: 21  KSNQRRTTFAKAEAFNVFTDIEKYSLKNNNDPSLPKFEFKDYLSSKIKRVNEALDQTVPL 80
           KS ++RT  + + A            +  ++ +   F+FK Y+  K + VN ALD +VPL
Sbjct: 28  KSLRKRTVLSLSSALTSQDAGHMIQPEGKSNDNNSAFDFKLYMIRKAESVNAALDVSVPL 87

Query: 81  QHPTQIHEAMRYSLLLSGKRFRPVLCLASCELIGGDK 118
             P  I EA+RYSLL  GKR RP+LC+A+CEL+GGD+
Sbjct: 88  LKPLTIQEAVRYSLLAGGKRVRPLLCIAACELVGGDE 124

The following BLAST results are available for this feature:

BLAST of Spg008391 vs. NCBI nr


Match Name	E-value	Identity	Description
QFU96147.1	1.5e-19	46.15	geranylgeranyl diphosphate synthase 8 [Tripterygium wilfordii]	[more]
XP_038701796.1	1.5e-19	46.15	geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic-like [Tripter...	[more]
XP_006482126.1	2.0e-19	62.34	geranylgeranyl pyrophosphate synthase 7, chloroplastic-like [Citrus sinensis]	[more]
GAY43756.1	2.0e-19	62.34	hypothetical protein CUMW_076950 [Citrus unshiu]	[more]
XP_006430612.1	2.0e-19	62.34	geranylgeranyl pyrophosphate synthase 7, chloroplastic [Citrus clementina] >ESR4...	[more]

BLAST of Spg008391 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94ID7	1.3e-18	42.48	Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Hevea brasiliensis OX=39...	[more]
Q43133	1.6e-16	54.67	Geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic OS=Sinapis al...	[more]
A0A0U3BRC5	3.7e-16	53.42	Geranylfarnesyl diphosphate synthase, chloroplastic OS=Leucosceptrum canum OX=69...	[more]
P34802	3.7e-16	54.79	Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplast...	[more]
Q9SLG2	4.8e-16	42.86	Geranylgeranyl pyrophosphate synthase 4 OS=Arabidopsis thaliana OX=3702 GN=GGPP4...	[more]

BLAST of Spg008391 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5P9Q552	7.4e-20	46.15	Geranylgeranyl diphosphate synthase 8 OS=Tripterygium wilfordii OX=458696 GN=GGP...	[more]
V4ST05	9.6e-20	62.34	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10013734mg PE=3 ...	[more]
A0A2H5NUF2	9.6e-20	62.34	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_076950 PE=3 SV=1	[more]
A0A140CWP4	3.7e-19	45.76	Geranylgeranyl diphosphate synthase OS=Bixa orellana OX=66672 GN=GGDS PE=2 SV=1	[more]
A0A7J9FR19	3.7e-19	42.98	Uncharacterized protein OS=Gossypium trilobum OX=34281 GN=Gotri_026735 PE=3 SV=1	[more]

BLAST of Spg008391 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G36810.1	2.6e-17	54.79	geranylgeranyl pyrophosphate synthase 1	[more]
AT2G18640.1	3.4e-17	42.86	geranylgeranyl pyrophosphate synthase 4	[more]
AT2G23800.1	1.3e-16	54.55	geranylgeranyl pyrophosphate synthase 2	[more]
AT2G18620.1	6.4e-16	56.06	Terpenoid synthases superfamily protein	[more]
AT3G14530.1	3.2e-15	42.27	Terpenoid synthases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008949	Isoprenoid synthase domain superfamily	GENE3D	1.10.600.10	Farnesyl Diphosphate Synthase	coord: 52..127 e-value: 1.2E-15 score: 59.3
IPR008949	Isoprenoid synthase domain superfamily	SUPERFAMILY	48576	Terpenoid synthases	coord: 59..117
None	No IPR available	PANTHER	PTHR43281	FARNESYL DIPHOSPHATE SYNTHASE	coord: 15..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg008391.1	Spg008391.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008299	isoprenoid biosynthetic process
molecular_function	GO:0016740	transferase activity