Spg008244 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg008244
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Ty3-gypsy retrotransposon protein
Location	scaffold2: 18780084 .. 18793994 (+)
RNA-Seq Expression	Spg008244
Synteny	Spg008244

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTATCAAAACTCCTGCGACACCTGCTTCGAAAATAGAGAGGACACCAGCATCAACACCTGGAGGACCTCGATCTAAGGAAGAGAAAATCGTTGTTACCGTGCGGTTAAGGCCTCTGAGTAAAAAGGAGCAGCAAGCGAAGGATCAAATGGCCTGGGAATGTACTGATGATAATACGATTGTGTACAAACCCCAGCCTCAGGAACGTCAAACTCGTCATCTAATCTAGTTTAATATAAAGGGGGATTTGCACAAACAGCAAAAACCGGCAAAAGTATTGCAAAAGTAGCAAAAAAATAAAATTATTTGCGGAAATAGCAAAAAATACGTTAAATTACGAAAATACCCTTAGTATCTCCAATAGTCTATCAGTCCCTATTATTGATAGTCACTGATAGACTTCGATTAATCGGAGTCTATCAGTAATAAATATTGATAGACTTCGATTAATCGGAGTCTATGATAAATACTGATAGACTTTGATGATAAGCTTCAATTAAATTACGAAAATACCCTTAGTATCTCCAATAGTCTATCAGTCCCTATTATTGATAGTCACTGATAGACTTCGATTAATCGGAGTCTATCAGTAATAAATATTGATACATTAAATTACGAAAATACCCTTAGTATCTCCAATAGTCTATCAGTCCCTATTATTGATAGTCACTGATAGACTTCGATTAATCGGAGTCTATCAGTAATAAATATTGATAGACTTCGATTAATCGGAGTCTATGATAAATACTGATAGACTTTGATGATAAGCTTCAATTAATCGGAGTCTATTAGTGATAGACCTTGATAGACTTTGATTAATCGAAGTCTAGACTCTGATAATCATAATCTATAAGTTTTTATCGTGTTTAATTCAAGCCTATCAGTGATAGCCACTGATAGAAAACAATTTAATTCAAGGCTATCAGTTTCTATCCATCAGTTTAATTTAAGTCTATCAGTGATAATCACTAATAGAAAATCGTTTAATTCAAGGTTATCAGTTTCTATCACTGATAGAAATCAATTTAATTCAAGACTATTAGTTTCTATCACTGATAGAAACCAATTTAATTGAAGTTTATCAGTTTCTATCAGAAATCAATTTAATCAAAGTCTATTGACTTGTATCACTGATAGAAATTAGTTTAATTCAAATCTATCCTTTTCTATCGAGGATAGAAATCAGTTAATTGAAGTCTATCCGTTTCTATCCCGTATAGAAATCAGTTAATTATCAATTAATTGAAGTCTACCAATGATTGTTACCGATAGAAATCAATTTAATTGAAATCTATCAATAAAGTACTTTCCATTGCAATCATCTCGGTAATTAGAAACTCATCCAAAATTATTATACTACAATCATAAATTGAACAAAAAATTTAAGTCTCTTGTGGTAATTAGAACATAAAATCCAAAAATAACCATTACGAACAAGCGACTCTCAATCAACAATATAATTTTTAAAGCGCACACAAGCTCCGTGACCACCACCATGAAATTGCTATTCTTTTTTTTTTTTTGAAAAATACATAAAATTGCTATTCTTGTATTCTTTGTATTTCATTATCTATCAATTATAGTCTGTGATAGACTTCGACCAGTGATAGTCAGTGATAGACTACGATTAACCAGAGTATATCAAGTGATATACTTTGATATACCTATACAAACACTCACCAAAATTGCTATTTTTGTATTCTTGGCATTCTTGAATTAAAAAGAAGGTCAACAAGAGCTTAGCTCAATTGGCATAAACTTGTACACAATGCACAGAACAAAACAGATGGAAAAAAAGTATATTAATCACACAAGAACTCCACCCGCATAAATGCACAAAAAATTAAAAAAAATTAAAAAAAAAAAAAGAAGAAGAAATCGTAACAGAGGGAAGAAAGGGAAAACGAAAAGCAAAAAAAAAAAAAAAAAAAGAAGAAGAAATCAGAACAGAGGGAAGAAAGGGAAAAAATGATGGAAGAAAGGGAAAGGGTAAAATGGGAATTATCAGAATATATTCTAATTTTTTGCCATATTTGCAATTCTTTTTACCTTGTGCTAAATTTGCTATTATATATAATTAATTTGCCACCCACTGCAATTACTCTAATATAAAATAATGAAATTTATCCAGCTCAACATGCCACGTCATTTTTCCGTTAGTCAACTAACGGTCAAATTAACTCATGGACCATTTAAAACTAATTTTCAAACCTCAGGGACTAAAGTGTAGCTTTTGAAACTTCGGAGACCAAATAGACATCAACCTCAAACCTCAGGGACCAAAAGTAAAAAAAAAAAAGAGTTGTTGACAATTAATTTTCTATGATCAGTTTGATACTATTTTAGTTTTGTTTCTTTATCTTCTGTTTACTAATATTTTTTCCTAATTTAGGTTAAAAACTGTTTTCTATTTGAAATTTGAAATATTTAAAAATAATCATAAATAATTTTTTTTAAAAAAAGGTTTTTTTAAAGGAAAAAAAAAAGGTTTTTTATAACCGTAAAAAATTACACAAATAAATTGAGAATAAAAAAAACTTTAAACAAAAACACGCCCATTTGTTAAGATTTTAAAATTTTTTATTTTATAAAATTTAAACTTGTTTACCACTAATACTATCCAATGTTTGACATTTTTAGTCCCTAAACTATAAACTTGTTTACCACCAATATTATCCAAGTTGGCTTAAGTTCAAAATTTTAAAAATAACAGATCATAAAATAAAACAAGTATGAGGAGTCAAAACGAGCTTAGCTCAGTGGTAATTGACATATACTCTCAACCAAGAGATCCAGAGGTTCGAATCTCCCTACCTTCAAAGGTTGATGTACTAAAAAAAAAAAAAAAAGAGATAAACTTAAATTTTTAAAAATAAAATAAAATATTTAGGAATTGAAATTATTATAGACTTTAATTTTTGCATCACTTTCTTTTAGCTTTCCAACCTACCTTTGAACTTTCAAGGTTGACGTCCATCTTTTCTTGGCTACCATTGATTTAATTTGTCTTTAAATCAATGGTAGCCAAGAAAATAATAATAAGCAAGATTGCTGAAATGTCATAATAATAAGCAAGATTACGTCACCAATTTTAAAGACAAATTTGTTAGGGTTGGTGATTATCTTCAAGACAAATAATAATAATAAGCAAGATTACGTCACCAATTTTCAACTTTCTTCAAAAAAACAAAAAAACAAAAAAAAAAAAAAAAGCAAAAACATATACAGAAGCTTGCGGCTGGGACACAGAGGGCATTTATGAAAAAAAAAAATTGGAAGTGGTTATGCTGGACATATATGTAAATTTAAAAAAAAAAAAAAAAAAAAAATAGAGAAGTCAAATCTTGCGGCTGAGCTTATGTGTATGATACATGCGATAAAAAAATCTGGCGGCATATGTATTTGAAGACGACAACCCTAACATGTACATATGTTAAAAAAAAAAGGGAAAAAAGAAAGTAACTTGAGTTCATGAAGCGGTGGAAATTAGAAGATAAATTTGATGAAAGTTGAAAATCGTCCACGGTTGGAGTTCAATTACATATAGATGTTTCATGGGATACGAACGACAACTATATAATTAAAAAAAAGGGACAAAAGTTTTGAAAGGATTTTTTTTTTTACTTACCGACGGCACGGCACGAAGTGAGATTATTGCTCGAACTCAAGGCCTACACAAAGAAGAAAATATATGAGCATTTGAAGTCAAATGAAAGAAAGAAAAGAGAAGTTGAAGAGGAGAATTTTTCTCAATACCTAGTTTTCTTGCTTGAATGACTTTGTGTCTTGACCTATGCAAACTCCTCAATTTATATAAGGAGAAATTAGGTCAAGCACATAAGGAAAGGCTGTTTTTTGGCAAAGGAAATTTTGGCCTAATCAAATATGGTAAGGAATTTCCTACAATTTCCATTAAGGTAAAAAAAAATTTGCCTCCAAGTTATATGGATCAACAAAGAAATCTTGGCCAAATAAAATTGGCAAGCCAAGAGACCTCCAATTTTTTTGTTCAAAGTGCCTATCTACCTCCAAATTCATGTCCAGGGTAGAGAAAAAACAATTGTCGCACTTTTGGCTAAAATTAATTTTCAAATTTAAAAAAAAAAGTATTGGAAATCAAAATTTAAAATTTGGCCAAAATTAATGTTGGTAGCGAAAACGAAATTATTTGGAATTATAAGTTAATATTCTAATTAATTTTGCCTATCGACACTTATGACTAAACGTCATATATTTTTTTCTCATAAATCATGCTTTTCAAAATCCATGCACGCGTAAGGGTACATAAATTTCGAAAAGGGGGCATTTGTTGAGTGAGAAATTTCGGCCAATCACAAATTGCCACATCATTAATTTAAATTAATGATAAAATAAATTTGGGACTGATTACAAATTTACACGTGTCCCTAAATTAAATTAATAAACATTAAAATTTGGCAAATCAAACAATGCCACTTGTCTATTATTGATCCAGCAGATGCCATAAGTCGTGTCCAATCAAATTATGCCACGTGGCAATTGGACCCGAGATCATTGAAGAAATTGGGCTAAATTAAATTAATTCAATTTTATTAAAAATGAGTTGGATTAAAGCTCAAATATAGCCTAAGCCCAAAGTTTGGGCCCAAGCCCAAGCCCATATGAGGTCCATCAAACTCTATAAATAGAGGAGGCCACCATTCATTTTGGGCATTCAGACAGAGTCAAAGAAGCCAGAGCCCAGAGCATTCTCCCAAGGTCTAGAGTCTTCAGAAGTCAGAGAATTTAGAGAATTCAGAAGATCCAAGATTCAGAATTCGGCTATCTCAAGACTCAGAAGATCCAACGACTGGAAGACTCCAAAGAATCAACCGTTTCTTCATCAAGATACAAGTTGAAGATCCAACCTTCCTCCGTCTGAGATCAAGCTCGTTAGCCCTCAGATCAGGCTCTACATTTTGAGAGAAAGCATCAGAGGATAAATATTAGAGACTGTAACACTTTATACATACAAATTCAATAAAATCAAGTTCATTTCCACGAATTAAATTTCCTTGTCGAAATCTCGTGTGAACAAATTGGCACGCCCAGTGGGACAGTCTCTACCTCTCATCTCTTTTTCTCGCAAAGAAATCATGACTTCCGAAGAAGCTTCTTCAAAGATCGCTGCTTCAAGCAACTCCTATGTGGGGCCAATTTCTCGCAGTCGCTCCAAGGAAACCCAACACGAAGACAGCCAAACTCCAGTCATTGCAAACAAGATGCTGAGACGCATGACAGAATCTGCTCAACTTGAAATCGCCACTGCAAAAAATCTGATGCTTGGCAAATTCATCTCTTCTTCTCAGCAACCAAACGAAACATCCAGTCCTGATGTGATGTCTGTTATGATGACTGATGTCGGAACTAGTGAAGAACGAATGGCTGAAGTTGAGAAGAAAATCAGCATGTTACTGAAGATGGCCGAAGAGAAAGACCAAGAAATCGCCTCTCTCAGGAACCAGATGGAAAGTCGGGATGTTGCTGAATTGAGTCAGACCCCTGCCATCAAAGACAAGGGAAAGATTATTGCACAAGATCAGTCACAACATTCCGCTTCTATTGCTTCACTGTCTGTCCAGCTGCTCCAGGATATGATCATGAATTCCATCAGAGCTCAATATGGTGGACCGACTCAGAACTCTCTCTTGTATTCCAAGCCATATACCAAGAGAATAGAGAATCTGAGAATTATGCCTCATGGACACCAGCCACCGAAGTTTCAACAATTCGACGAGAAGGGCAATCCCAAGCAGCACGTTGCTCATTACGTCAAGACATGTGAAAACGTTGGTACTAGAGGAGACCTACTGGTCAGGCAGTTCGTACGAGCACTGAAGGGGAATGCTTTCGACTGGTATACGGACCTTGGGCCTGAGACTATTGATAGTTGGGAACAACTTGAGAAGGAGTTCCTCAACCCCTTCTACAGCACAAGATGAATCGTTAGTATGACGGAGCTCACCAGCGCTAAAAAACGGAAAGGCGAACTGGTTGTTGACTACACAAACCGTTGGAGAGCTTTGAGCTTAGATTGCAAGAACCGACTCACCGAATTGTCTGCTGTTGAAATGTGCATCCAAGGCATGCATTGGGGACTCCTCTATATCCTGCAAGGAATAAAGCCCCGCACTTTCAAGGAGTTGGAAACCCGTGCTCATGACATGGAATTGAGCATTGCTACTAGAGGGAACAAAGATTCTATTGTCCCCGATGGCAGGAAAGAAAAGAAAGAAGTTAAGAATACTGAGAAAGCTACCAAAAGCACTACGAAAGAATCAATGGTAGTCAATGCAGCTCCTTTCAAGTTTTCTTCGAAAGGAAAAGAAAAGAAGATAGAGAAACAACAAGAGGGAGATGAGAGACGTCATCTGACCTTGAAAGAAAGGCAAAAGAAAGTTTACCCTTTTCCAGATTCTGACATTTCAGATATGTTAGAACAACACCTAGAAAAACAACTTATTGAACTACCAGAATGCAAGCGACCGGAAGAGATGAGGAGAGTTAATGATCCCAACTACTGCAAATATCACCGAGTCATCAACCATTCGGTGGAAAAGTGCTTCGTTCTGAAGGAGCTAATTTTGAAGTTAGCTAAAGAAAAGAAGATTGAGTTAGATCTTGATGAGGTAGCTCAATCAAATCATGCGACGATAGCAACAAACCTGAACAACCAAGTAGCTCCAAGCCCGATTCATGATTCAGTAGCAAGTTTGATCCAGTTCGGGACATTAGAGCCGATTGTTATTTGGCTTCAGCAAGAATCTGTAAAAGACATCTTCCAAGACCAACTTGAGTTTGTTGAAAATGAAGAGGAAGGATGGACTTTGGTAACTCGTCGAAAGAAGCAAAAGAAACATTCCGTTCAAAGAGAGTCTCACATGTTCCGAAACTACAGAAGAAAGAACATGTCACAAAAGCAGAAGAGAAAGATAAAAGGTTCGAGAAAGCCTAAACTAGTTGTCGAGGAGAATCAAGATTTTGTTCTGTCTCGACATCCGGTAACCCTTAAAGATTTCTTCCCAAAGAGCTTTCTTAATGACGATCATGAGGACATCCTTGAGATAGTCGCATGTCATGCTGTCAATGCATTCGAAGAAGGCAATTCTTCCTCAAGTCCATCTCAGGTGATGACAAGGCCAGAAGATTCACCTTCATTTACGATAGATGATTTGTTGTCACTTCCTCAAACTGAAGGGAATAAAAGTCCCCACGCAGCGGAAGCGCATCGATTGGACCTTACGCCGTATATTAATTAACATTAAAATACCGTTACGAAAACTCAATCAAACTTTAAACTCCTTTTAAAGTTGCTGGAAATTCTGTTTAAACATGCTTCAAAATAAATCTAAATTTATTTTCATGTTTTTCTAAAGAAAAGGGGAAGAACCGTCACATACCTTCGTTGTAGACTTGACCGTTCTTCGCCAACGACGCTCCAACGAACGAAAACGCAGCAGCCTCCTCGTCTTGTGATCACTGGAAAATTCTTCTTGAATGACACAATAAGCACAGAGGTTACACCGGTATGACTCTAGGTCTAGGAGGCAAAAGACTTGTGGGAGTCTTTTTCTAAGAGTGAGGCTAGAGAGAATTCTAGGTCTTGTCTTGATAGTCTAAGAGCAAGAGCAAGAGTGTCAAGTGTCCTAGACCAATTAGGTCTAGTGTTCTATTTATAGAAGAGAGGCCATGAATAAAATATTCAATTAAATCAATCTTTTCCAAAATTGATTCAATCTTATTCCTTAATTAATCAATCATGATCAATCAATTCCACAATTGATTAATCTTTTCCACAAATGACTAATTACTTCCATAAGTGATTAGATCATTTCCATAAATGATTAATCACTTCCTTAAGTGATTAATTATTTCCATAATTGATTAATTCCCACCAATTAAATATCACATATTTAATTTCCGGCCTAGAATTAATTAATTTGCCCAAACACATTTTAGGCCTTAAATTAATTAATTCATTATTTGAACTCTTTCAAACTTCCATAAATTTATATTTGAATTTCTTCAAATATTAATTTCTCTCATAATAATATATCAATATATATTATATTTGTTTCCCTTAGTAAATTGAACATTTTCAATTTACATTTATTACTTAGTTGCCTCAAATTACTTTATGAGCTACCAGTGGGACCTAATGGACCTGCAGATCAGAAGCTCCAACGATGTGAGATTAATTGGTCAAACTCATTAACCACATTAATCAATATTCGTTAACTGTGTTCATTCCACTATAGACTCACAGTTGCACTCTTCTCACTGCAGACATATTTTCTGTGTCCACGGATATAGACCAATATCGACTAGTTAGTCCTTCACGAGTGTCCGTAACACCAGCTGGGTCAAATTACCGTTTTACCCCTGGGTTACCTCTATTTCCTTAAGTACCAATTCTCCTCTAATGAACAACCTGTTTGTGGTCCAACCATCAAACAGAAAACCCTCTCGTGCCATTGAGAGGGTAGGGCCCTTTGTTCAAGACTCGGAGTAACCACTTAAGGGAACACTCATCTGCTTCCCTAAAGTCGGGAAGGAGTGAATTCCATCTTGTACGATTATGTTCCCAGCTTCCCATTCGGTCTTGTCCCCAAAGTGGTAGGCTTATTGAGTCGGCGTATTGGCCACTCTCACCCATACAAATCAAAGGACAATCTCTCATGAGCAGGAGTCCATAATCAACTCAGGATTAAGACTAAGTTGTCTAGGTCGTCCTAGTGAAATAGAAAACCAACTAGTTAACGGTGTTATAACCAGTGGTTACTATTTCGCGGTCCGGTCTTATGCAAACTCATTGCATAGGATACCCCCACTCGCATGTCTCCTACACGAACGCGTTGGATCGCAGCGTTTGTATCAAATACAAAGTGGGTCGTATCCATAGTGTCACCAGGATAAGGCACCCAGTCTTATCCCTATACTATAGACCCTTTAGGCTGTTTCTTGAACAATGATCCCATATGTCGCTACATATAGTTCAAGACTCATATTACAGCCTTAGATGTCTAGTTTATTGGATTATGGTTATTATTAGGCAAAGACAAATATAAAATAACTAATAACAATTAATAAAAAACATATCAATATTATTTCATTAATATCCGGTCAACGGTTACATTCACTATCTACGAGTTTTAGGGCATAAAACCCAACACAAACAACCAAAGATGCTATTGTTGAAACATTGAAAAGATCTAACGTTTCACACGTTCCAGACTTGCAAGAACACAAATGTGCCTCATCAAACGTCCCTGCAAAATCGAAAGCTCCAAAGGAAGAGGCATCGTCAAACGTCCCTATATTACGCTACATTCCTTTATCTCGACGCAAGAAAGGGGAATCACCATTCATAGAATGTTCAGGAATTTTTAAGGTTGGTGATGTGGAGATTCTAAAAGAAAATTTCACCACACCTCTGACAGCAATTACCAAGCAAGAGATTCAGGAATCAAAGACTGATCGTACCAAAGTGACTTTGCCGGAAAGACGAGCGAAGGCTGGATTTGACCCAAATGCATACAAACTCCAAGAAAAGGCAAGATACGACTTTACAACTCATACTGAGTTTAAAAGTCTAAAAATCTTCGATGGGAGATCTGAGCCTTCTCCGACACAGAAGAAGCTCCAAAAAGAAGGTTATGCCATACCATCCTCGAGAGCCGGACTATGGTACAATCCCTCAGAGCCAGTTCGTATAACCAGAAAATGGAAAGTTGCAGATGCACATCACATAACGATAGAAGAGATGAGGGATCCAAAAGATAAAAAGAACGATGATAGCCAGAAAATCTCTGTCTTCGATCGCATTAAAGCGCCGACTACTCGTCTTTCAGTTCATCGGCGGCTGAAATATTCATCTTCGGAAAAGGAAGGTCAGAGCAAAACTTCTGCTCCTACCCGACATTCAGTGTTTCATCGTTTGAGTGTGTCTACATCGAAGAAAGTAGATGAAACTTCAAGATCCGTGTTCGACCGCCTTCAAGCAACATATGGCCAATACAAGGGAAAGTTGAAAAGTCTTGAAACAGAAGAATCCGACGAGATGAATGACAACAACGGATTTTCCAGTACTGTTCCTTCACGGATGAAGAGAAAACCTTTTGTTCTCATAAATACAGAAGGTGCTTTAAAAGTAAAGCGACAGTTAGTCATTCTAACTAACCCTTCAAAGGTGAACCAATAGCTTGAAGAAGAATGGGTCAATTGTTGCCATATTTCTTTCAAAGAAATGCCAGATACTGAAATTTCTGAAGAAGATGCTGAAGAAGCACCCACATCGTTAGAAGATGGCAGTCAATCAACAATTGATGAACTCAAAGAGGTAAACCTGGGTACGACAGAAGAACCACGCCCGACATTCATCAGTGTGTCACTTAGGGCTGAAGAGGAACGTGAATACTTGAATTTGCTCGTTACATATAAAGATGTTTTCGCTTGGTCGTACAAAGAGATGCCAGGACTTGATCCAAAAATAGCAGTCCACCATTTTGCGATTAAATAAGGATATCGACCTATTAAGCAGGCCCAAAGGCGTTTCCGACCGGAGCTCGTTCCTCAAATTGAAATTGAAGTCAACAAGTTGATAGAAGCGGGGTTCATTCGAGAAGTGAAATATCCAACATGGATAGCAAACATTGTGCTAGTCAAAAAGAAGAATGGACAACTGCGGGTATGCGTAGACTTCCGTGACTTGAATAATGCATGTCCCAAAGATGATTTTCCATTGCCCATCACTGAACTTATAGTCCATGCCACTACAGGACATGAAGCCTTATCTTTCATGGATGGATCATCAGGGTATAATCAAGTTCGAATGGCCCTTGAAGATGAAGAGATGACAACATTTCGAACTCCAAAAGGAATATACTGTTACAAGGTGATGCCTTTTGGATTAAAGAACGCCAGGGCAACTTACCAACGAGCCATGCAGAAAATCTTCGATGATATGCTCCACAAACGTGTTGAGTGCTATGTTGATGATCTCGTGGTCAAATCCAAGAAACGAGAGGACCACTTGCAAGATTTGAAGATAGTTTTTGACCATTTGAGAAAGTACCAGTTGAAAATGAATCCTCTTAAATGCGTCTTCGGTGTGACATCAGGAAAGTTTCTTGGTTTCGTAGTAAGGCATCGAGGAATTGAAATCGACCAATCAAAGATTGACGCCATTCAGAAAATGCCAGAACCACGAAACTTGTGGGAATTAAGAAGTCTCCAAGGGCGTCTGGCCTATATCAGAAGGTTCATCTCCAATCTAGCAGGTCGATGTCAGCCATTTCAAAGACTGATGAGAAAAGACACAACCTTTGAGTGGGATAAAGCTTGTCAAAATGCTTTTGATAGCATTAAAAAGTATTTGCTTAATCCTCCCGTCTTAAGCGCTCCAATTGCAGAAAAACCGTTGATATTGTACATTGCTGCACAAGAAAGATCACTTGGGGCATTGCTCGCTCAAGAGGGAGAGAAAGGCAAAGAATGTGCTCTGTATTATCTAAGTAGAACTTTGAATGGGGCAAAGCTAAATTATTCACCCATCGAGAAGATGTGCCTTTCACTTTTCTTTGTCATTGACAAACTGAGACATTACATGCAAGCCTTCACGATGCACTTGGTGGTAAGGGCTGATCCAATCAAGTATGTCTTGTCTAGACCAATTATCTCCGGGAGGTTGGCTAAGTGGGCAATCTTACTTCAGCAATATGACATTGTCTACGTTCCGCAAAAGGCGGTGAAGGGGCAAGCCTTGGCAGACTTCTTAGCCGACCATCCGGTACCGTCAGACTAGAAATTATCTGAAGCCTTGCCTGACGAAGAGATATTCTACATTGAATTGGCTGAGCCTTGGACTATGTATTTTGATGGAGCAGCTCCAAGGAATGGCACAGGGGCAGGAGTAGTATTCATTTCGCCTGAAAAACACATGTTGCCATATAGCTTCACATTTGGAGAAGTGTGCTCGAACAACGTCACTGAATATCAAGCGCTCATCATTGGTCTTCAAATAGCCAAAGAGATCGGAGTGATGTATATTGAAAATTTTGGAGATTCAAAATTGATAGTCAATCAATTGTTGCTCCAATATGAGGCAAAACATGAAGATTTGATACCTTACTTCAATTACGCCAGACAATTATTGGAAAACTTCGAGAGCGTGACGATAGAACATGTTGCAAGATCTGAAAATACAAAGGCTGATGCATTGGCAAATTTAGCCACTACTCTAACGATTTCAGAAGGTGAAGTTCTAAACATTCCACTCTGCCAAAGATGGGTTGTTCCTCCAACTGAAAAGGAAAGTCAAGAAACGAATGCAATATCTGTCTATGTGATTGAAGAAGAAGATTGACGACAACCGATTATAGATTACCTACAGGATGGAAAGCTTCCTGTCGACACACGTCATAAGACTGAGATACGAAGAAGAGCATCTCGATTTATCTACTACAAAGATACCCTATATCGTCGCTCATATGAAGGCCTTTATCTTCGATGTTTGGGAAAAGAAGAATCAATGCAAGAATTAGAGGAACCACATTTAGGTGTTTTTGGAGCTCATCAGTCCGAGCCAAAGCTTCATTTTCAACTAAAGAGAATGGGCTACTACTGGAATACAATGGTTCAGGATTCGATGCAATATGCAAAGAGATGTGAAGCTTGTCAATTTCATGTCAACTTCATACATCAGTCGCCAGAGCCGCTTCACCCAACTGTAGCTTCATGGCCATTTGAAGCTTGGGGGCTTGACCTTGTTGGTCCTATAACACCCAAATCATCGGCAGGACACTCTTATATCCTTGCAGGAACTGATTATTTCTCAAGATGGGCTGAAGTTGTTGCATTAAAAGAAGCAAAGAAAGAAAATGTAGCAGATTTTTTTCGTAATCATCTCATTCATCGATATGGCATTCCTCATCGCATCGTGACAGATAATGGAAGACAGCTCTCTAACAGTTTGATGGACAGGTTATGTGAAAAGTTTGGCTTCAAACAATATAATTCGTCTATGTACAATGCTGCTGCGATGGGTTGGATGAAGTATTCAACAAGACATTATGCAACTTGTTGAAGAAAGTAGTCTCCAAGAAGAAGAGAGACTGGCAAGAAAGAATTGGTGAAGCGTTATGGGCGTATCGGACCACTTATCGTACTCCAACAGGAGCCACACCCTAGTCTTTAGTCTATGGAGTAGAAGTTGTTCTCCCTCTAGAAAGAGAGATATCATCATTGCGAATGGCGGTGCAAGAAGGTTTGACTGTGGAAGACAATGCTAAGTTACGTCTTCAAGAGTTAGAAGCATTAGATGAGAAAAGATTGGATGCTCAACAAGCTTTGGAATGCTATCAAGCGCGCATGTCTAAAGCTTTCAACAAAAATGTACGACCTCGTTCATTTCAAGTTGGTGAGCTCGTACTCGCAGTTCGAAGACCTATCATCACAACTCGGCATACAGGACACAAGTTTACACCTAAATGGGACGGGCCATACATTGTGAAAGAAGTCTACACGAATGGAGCATACAAGATAATTGACAAAGACGGGCTCAAAATTGGCCCAATCAACGACAAGTTTCTCAAGAAATATTATACTTAAAATGTAATACTCCTTATCGTAAGAGTATAAACTACATGATACTCCTGGCCCGCATGAGTTAAAAAGGTGAATGACCCAAAAAAAATCAAATTTGTACCCTGAACTACGTTATGACTTGATCTCATATATTAATGGGTACGTAGGTAACTTAAAGGAAACTTTAAGCTCAGTCCATAAAATAAAAAAATAAAAAAAAATCATTATCCCATGTTGGTAAAAGGAAATTCATTCTTACATAGTACAAAAATAATTGTAAGTGAATTATGATGAGAAACAAGTCTGA

mRNA sequence

ATGACTATCAAAACTCCTGCGACACCTGCTTCGAAAATAGAGAGGACACCAGCATCAACACCTGGAGGACCTCGATCTAAGGAAGAGAAAATCGTTGTTACCGTGCGGTTAAGGCCTCTGAGTAAAAAGGAGCAGCAAGCGAAGGATCAAATGGCCTGGGAATGTACTGATGATAATACGATTGTGTACAAACCCCAGCCTCAGGAACAGTCAAAGAAGCCAGAGCCCAGAGCATTCTCCCAAGGTCTAGAGTCTTCAGAAGTCAGAGAATTTAGAGAATTCAGAAGATCCAAGATTCAGAATTCGGCTATCTCAAGACTCAGAAGATCCAACGACTGGAAGACTCCAAAGAATCAACCTCGCTCCAAGGAAACCCAACACGAAGACAGCCAAACTCCAGTCATTGCAAACAAGATGCTGAGACGCATGACAGAATCTGCTCAACTTGAAATCGCCACTGCAAAAAATCTGATGCTTGGCAAATTCATCTCTTCTTCTCAGCAACCAAACGAAACATCCAGTCCTGATGTGATGTCTGTTATGATGACTGATGTCGGAACTAGTGAAGAACGAATGGCTGAAGTTGAGAAGAAAATCAGCATGTTACTGAAGATGGCCGAAGAGAAAGACCAAGAAATCGCCTCTCTCAGGAACCAGATGGAAAGTCGGGATGTTGCTGAATTGAAATCTGTAAAAGACATCTTCCAAGACCAACTTGAGTTTGTTGAAAATGAAGAGGAAGGATGGACTTTGGTAACTCGTCGAAAGAAGCAAAAGAAACATTCCGTTCAAAGAGAGTCTCACATGTTCCGAAACTACAGAAGAAAGAACATGTCACAAAAGCAGAAGAGAAAGATAAAAGGTTCGAGAAAGCCTAAACTAGTTGTCGAGGAGAATCAAGATTTTGTTCTGTCTCGACATCCGGTAACCCTTAAAGATTTCTTCCCAAAGAGCTTTCTTAATGACGATCATGAGGACATCCTTGAGATAGTCGCATGTCATGCTGTCAATGCATTCGAAGAAGGCAATTCTTCCTCAAGTCCATCTCAGCTACCAGTGGGACCTAATGGACCTGCAGATCAGAAGCTCCAACGATATGCTATTGTTGAAACATTGAAAAGATCTAACGTTTCACACGTTCCAGACTTGCAAGAACACAAATGTGCCTCATCAAACGTCCCTGCAAAATCGAAAGCTCCAAAGGAAGAGGCATCGTCAAACGTCCCTATATTACGCTACATTCCTTTATCTCGACGCAAGAAAGGGGAATCACCATTCATAGAATGTTCAGGAATTTTTAAGGTTGGTGATGTGGAGATTCTAAAAGAAAATTTCACCACACCTCTGACAGCAATTACCAAGCAAGAGATTCAGGAATCAAAGACTGATCGTACCAAAGTGACTTTGCCGGAAAGACGAGCGAAGGCTGGATTTGACCCAAATGCATACAAACTCCAAGAAAAGGCAAGATACGACTTTACAACTCATACTGAGTTTAAAAGTCTAAAAATCTTCGATGGGAGATCTGAGCCTTCTCCGACACAGAAGAAGCTCCAAAAAGAAGGTTATGCCATACCATCCTCGAGAGCCGGACTATGGTACAATCCCTCAGAGCCAGTTCGTATAACCAGAAAATGGAAAGTTGCAGATGCACATCACATAACGATAGAAGAGATGAGGGATCCAAAAGATAAAAAGAACGATGATAGCCAGAAAATCTCTGTCTTCGATCGCATTAAAGCGCCGACTACTCGTCTTTCAGTTCATCGGCGGCTGAAATATTCATCTTCGGAAAAGGAAGGTCAGAGCAAAACTTCTGCTCCTACCCGACATTCAGTGTTTCATCGTTTGAGTGTGTCTACATCGAAGAAAGTAGATGAAACTTCAAGATCCGTGTTCGACCGCCTTCAAGCAACATATGGCCAATACAAGGGAAAGTTGAAAAGTCTTGAAACAGAAGAATCCGACGAGATGAATGACAACAACGGATTTTCCAGTACTGTTCCTTCACGGATGAAGAGAAAACCTTTTGTTCTCATAAATACAGAAGTGAATTATGATGAGAAACAAGTCTGA

Coding sequence (CDS)

ATGACTATCAAAACTCCTGCGACACCTGCTTCGAAAATAGAGAGGACACCAGCATCAACACCTGGAGGACCTCGATCTAAGGAAGAGAAAATCGTTGTTACCGTGCGGTTAAGGCCTCTGAGTAAAAAGGAGCAGCAAGCGAAGGATCAAATGGCCTGGGAATGTACTGATGATAATACGATTGTGTACAAACCCCAGCCTCAGGAACAGTCAAAGAAGCCAGAGCCCAGAGCATTCTCCCAAGGTCTAGAGTCTTCAGAAGTCAGAGAATTTAGAGAATTCAGAAGATCCAAGATTCAGAATTCGGCTATCTCAAGACTCAGAAGATCCAACGACTGGAAGACTCCAAAGAATCAACCTCGCTCCAAGGAAACCCAACACGAAGACAGCCAAACTCCAGTCATTGCAAACAAGATGCTGAGACGCATGACAGAATCTGCTCAACTTGAAATCGCCACTGCAAAAAATCTGATGCTTGGCAAATTCATCTCTTCTTCTCAGCAACCAAACGAAACATCCAGTCCTGATGTGATGTCTGTTATGATGACTGATGTCGGAACTAGTGAAGAACGAATGGCTGAAGTTGAGAAGAAAATCAGCATGTTACTGAAGATGGCCGAAGAGAAAGACCAAGAAATCGCCTCTCTCAGGAACCAGATGGAAAGTCGGGATGTTGCTGAATTGAAATCTGTAAAAGACATCTTCCAAGACCAACTTGAGTTTGTTGAAAATGAAGAGGAAGGATGGACTTTGGTAACTCGTCGAAAGAAGCAAAAGAAACATTCCGTTCAAAGAGAGTCTCACATGTTCCGAAACTACAGAAGAAAGAACATGTCACAAAAGCAGAAGAGAAAGATAAAAGGTTCGAGAAAGCCTAAACTAGTTGTCGAGGAGAATCAAGATTTTGTTCTGTCTCGACATCCGGTAACCCTTAAAGATTTCTTCCCAAAGAGCTTTCTTAATGACGATCATGAGGACATCCTTGAGATAGTCGCATGTCATGCTGTCAATGCATTCGAAGAAGGCAATTCTTCCTCAAGTCCATCTCAGCTACCAGTGGGACCTAATGGACCTGCAGATCAGAAGCTCCAACGATATGCTATTGTTGAAACATTGAAAAGATCTAACGTTTCACACGTTCCAGACTTGCAAGAACACAAATGTGCCTCATCAAACGTCCCTGCAAAATCGAAAGCTCCAAAGGAAGAGGCATCGTCAAACGTCCCTATATTACGCTACATTCCTTTATCTCGACGCAAGAAAGGGGAATCACCATTCATAGAATGTTCAGGAATTTTTAAGGTTGGTGATGTGGAGATTCTAAAAGAAAATTTCACCACACCTCTGACAGCAATTACCAAGCAAGAGATTCAGGAATCAAAGACTGATCGTACCAAAGTGACTTTGCCGGAAAGACGAGCGAAGGCTGGATTTGACCCAAATGCATACAAACTCCAAGAAAAGGCAAGATACGACTTTACAACTCATACTGAGTTTAAAAGTCTAAAAATCTTCGATGGGAGATCTGAGCCTTCTCCGACACAGAAGAAGCTCCAAAAAGAAGGTTATGCCATACCATCCTCGAGAGCCGGACTATGGTACAATCCCTCAGAGCCAGTTCGTATAACCAGAAAATGGAAAGTTGCAGATGCACATCACATAACGATAGAAGAGATGAGGGATCCAAAAGATAAAAAGAACGATGATAGCCAGAAAATCTCTGTCTTCGATCGCATTAAAGCGCCGACTACTCGTCTTTCAGTTCATCGGCGGCTGAAATATTCATCTTCGGAAAAGGAAGGTCAGAGCAAAACTTCTGCTCCTACCCGACATTCAGTGTTTCATCGTTTGAGTGTGTCTACATCGAAGAAAGTAGATGAAACTTCAAGATCCGTGTTCGACCGCCTTCAAGCAACATATGGCCAATACAAGGGAAAGTTGAAAAGTCTTGAAACAGAAGAATCCGACGAGATGAATGACAACAACGGATTTTCCAGTACTGTTCCTTCACGGATGAAGAGAAAACCTTTTGTTCTCATAAATACAGAAGTGAATTATGATGAGAAACAAGTCTGA

Protein sequence

MTIKTPATPASKIERTPASTPGGPRSKEEKIVVTVRLRPLSKKEQQAKDQMAWECTDDNTIVYKPQPQEQSKKPEPRAFSQGLESSEVREFREFRRSKIQNSAISRLRRSNDWKTPKNQPRSKETQHEDSQTPVIANKMLRRMTESAQLEIATAKNLMLGKFISSSQQPNETSSPDVMSVMMTDVGTSEERMAEVEKKISMLLKMAEEKDQEIASLRNQMESRDVAELKSVKDIFQDQLEFVENEEEGWTLVTRRKKQKKHSVQRESHMFRNYRRKNMSQKQKRKIKGSRKPKLVVEENQDFVLSRHPVTLKDFFPKSFLNDDHEDILEIVACHAVNAFEEGNSSSSPSQLPVGPNGPADQKLQRYAIVETLKRSNVSHVPDLQEHKCASSNVPAKSKAPKEEASSNVPILRYIPLSRRKKGESPFIECSGIFKVGDVEILKENFTTPLTAITKQEIQESKTDRTKVTLPERRAKAGFDPNAYKLQEKARYDFTTHTEFKSLKIFDGRSEPSPTQKKLQKEGYAIPSSRAGLWYNPSEPVRITRKWKVADAHHITIEEMRDPKDKKNDDSQKISVFDRIKAPTTRLSVHRRLKYSSSEKEGQSKTSAPTRHSVFHRLSVSTSKKVDETSRSVFDRLQATYGQYKGKLKSLETEESDEMNDNNGFSSTVPSRMKRKPFVLINTEVNYDEKQV

Homology

[Close]

BLAST of Spg008244 vs. NCBI nr
Match: TYK05005.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 254.2 bits (648), Expect = 3.2e-63
Identity = 210/637 (32.97%), Postives = 285/637 (44.74%), Query Frame = 0


Query: 236 QDQLEFVENEEEGWTLVTRRKKQKKHSVQRESHMFRNYRRKNMSQKQKRKIKGSRKPKLV 295
           Q++   +E ++E WT+VTRRKK+K   +Q+E   +RNYRR N +QK K+K K +RK KL+
Sbjct: 364 QEKERLIEEDDERWTIVTRRKKRKSTPIQKEHRFYRNYRRWNKAQKNKKK-KKTRKLKLM 423

Query: 296 VEENQDFVLSRHPVTLKDFFPKSFLNDDHEDILEIVACHAVNAFEEGN------------ 355
            +E++DF  ++  +TL DFFP  FL D  ++   +VACHA+NA EE +            
Sbjct: 424 HKEDKDFPRTQRLITLADFFPTRFLGDHQDENPGVVACHAINATEEESIPLRSLEEEKVS 483

Query: 356 -------------------------------SSSSPSQL--------------------- 415
                                          SSSS S +                     
Sbjct: 484 KDLSRFNVDDLLSLPQEIKTILINALLNSAASSSSASTVTYESTPYCMSIDFSNDDLLLG 543

Query: 416 ------PVGPNG-PADQKLQRYAI-----VETLKRSNV---------------------- 475
                 P+  +G   +Q++ R  +     V  + +S +                      
Sbjct: 544 SKLHNRPLYVSGYVREQRVDRILVDNGSAVNIMPKSTIRQLGILMKELSNSKLVIQGFNQ 603

Query: 476 -----------------------SHVPD-------------------------------- 535
                                  SH  D                                
Sbjct: 604 GSQRVIDGVKKVEADSNPFSEAESHFADAKFYLKNDSSPEVVSVEVPLVNREDNLQLKSL 663

Query: 536 -----------LQEHKCASSNVPAKSKAPKEEASSNVPILRYIPLSRRKKGESPFIECSG 595
                          K  +S   AKS    +E +SN  ILRY+PLSRRKKGESPF+E   
Sbjct: 664 ASKEPHISIGTFHSEKSEASTSTAKSVILMDEKTSNPSILRYVPLSRRKKGESPFVESPQ 723

Query: 596 IFKVGDVEILKENFTTPLTAITKQEIQESKTDRTKVTLPERRAKAGFDPNAYKLQEKARY 655
             KVGD+E+LKE+FTTPLT ITKQEI   K D T+ +LP+RR K  FDP AYKL  KA Y
Sbjct: 724 GLKVGDIEVLKESFTTPLTKITKQEI---KIDLTEASLPQRRTKDEFDPKAYKLMAKAGY 783

Query: 656 DFTTHTEFKSLKIFDGRSEPSPTQKKLQKEGYAIPSSRAGLWYNPSEPVRITRKW--KVA 682
           DFTTHTEFKSLKI + + + S TQKKL +EG+AIP SR GL Y   EP+RITRK   K+ 
Sbjct: 784 DFTTHTEFKSLKIHE-QPKLSSTQKKLLREGHAIPMSRKGLGYKLPEPIRITRKGKEKMV 843

[Close]

BLAST of Spg008244 vs. NCBI nr
Match: KAA0061113.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK03782.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 252.7 bits (644), Expect = 9.3e-63
Identity = 207/599 (34.56%), Postives = 297/599 (49.58%), Query Frame = 0


Query: 115 TPKNQPRSKETQHEDSQTPVIANKMLRRMTESAQLEIATAKNLMLGKFISSSQQPNETSS 174
           TP    + KE + E      IA+ ML ++ E   +++   K          S+Q      
Sbjct: 372 TPLKFSKRKEGRAEKKDDGNIAD-MLEQLLEKQLIQLPECKR---------SEQAGNVDD 431

Query: 175 PDVMSVMMTDVGTSEERMAEVEKKISMLLKMAEEKDQEIASLRNQMESRDVAELKSVKDI 234
           P+            E+     E    ++L++A EK  ++          D+ E  + +D 
Sbjct: 432 PNYCKYHRVISHPVEKYFVLKE----LILRLAREKKIKL----------DLEEEVTPED- 491

Query: 235 FQDQLEFVENEEEGWTLVTRRKKQKKHSVQRESHMFRNYRRKNMSQKQKRKIKGSRKPKL 294
            Q++   +E ++EGWT+VTRRKK+K   +Q+ES ++ NYRR N +QK K+K K +RK KL
Sbjct: 492 SQEKERLIEEDDEGWTVVTRRKKRKSTLIQKESRLYINYRRGNKTQKNKKK-KKTRKLKL 551

Query: 295 VVEENQDFVLSRHPVTLKDFFPKSFLNDDHEDILEIVACHAVNAFEEGNSSSSPSQLPVG 354
           V E+++DF  ++  VTL DFFP  FL D  ++   +VA  + ++       S+P  + + 
Sbjct: 552 VHEKDKDFPRTQRVVTLADFFPTRFLGDHQDENPGVVASASSSSAPIATYESTPYCMSID 611

Query: 355 ------------PNGP-------ADQKLQRYAI-----VETLKRSNVSHVPDLQEH---- 414
                        N P        +Q+++R  +     V  + +S +  +  L E     
Sbjct: 612 FSDEDLLLGSKLHNRPLYVSGYVQEQRVERILVDNGSAVNIMPKSTMRQLGILMEELSNS 671

Query: 415 ------------------------------------------------------------ 474
                                                                       
Sbjct: 672 KLVIQGFNQGSQRVIDAKFYLKNDGSPEVVSVEVPLVNKEDNLQLKSLASRESHKSTGTF 731

Query: 475 ---KCASSNVPAKSKAPKEEASSNVPILRYIPLSRRKKGESPFIECSGIFKVGDVEILKE 534
              K  +S   AKS    +E +SN PILRY+PLSRRKKGESPF+E     KVGD+E+LKE
Sbjct: 732 HSGKSEASTSTAKSVIVMDEKTSNPPILRYVPLSRRKKGESPFVEFPQGLKVGDIEVLKE 791

Query: 535 NFTTPLTAITKQEIQESKTDRTKVTLPERRAKAGFDPNAYKLQEKARYDFTTHTEFKSLK 594
           +FTTPLT ITKQEI   K D  + +LP+RR K GFDP AYK   KA YDFTTHTEFKSLK
Sbjct: 792 SFTTPLTKITKQEI---KIDLIEASLPQRRTKDGFDPKAYKSMAKAGYDFTTHTEFKSLK 851

Query: 595 IFDGRSEPSPTQKKLQKEGYAIPSSRAGLWYNPSEPVRITRKW--KVADAHHITIEEMRD 621
           I + + + S TQKKL +EG+AIP SR GL Y P EP+RITRK   KV D++HIT++E+ D
Sbjct: 852 IHE-QPKLSSTQKKLLREGHAIPMSRKGLGYKPPEPIRITRKGKEKVVDSNHITVKEV-D 911

[Close]

BLAST of Spg008244 vs. NCBI nr
Match: TYK02262.1 (uncharacterized protein E5676_scaffold18G00630 [Cucumis melo var. makuwa])

HSP 1 Score: 247.3 bits (630), Expect = 3.9e-61
Identity = 155/327 (47.40%), Postives = 194/327 (59.33%), Query Frame = 0


Query: 371 TLKRSNVSHVPDLQEHKCASSNVPAKSKAPKEE-------ASSNVPILRYIPLSRRKKGE 430
           T K+SN  +  + Q++    S    K +AP+ E         SN P+LRYIPLSRRKKGE
Sbjct: 262 TSKKSNKGNTLNSQQN--GESTTETKLRAPEAEKIATLQKEVSNPPVLRYIPLSRRKKGE 321

Query: 431 SPFIECSGIFKVGDVEILKENFTTPLTAITKQEIQESKTDRTKVTLPERRAKAGFDPNAY 490
           SPF ECS    V + EILKENFT PLT I K E ++ +    +  LPERR   GFDP AY
Sbjct: 322 SPFAECSKNPTVKNTEILKENFTPPLTKIEKGEAKKIEKKELEAYLPERRTVEGFDPKAY 381

Query: 491 KLQEKARYDFTTHTEFKSLKIFDGRSEPSPTQKKLQKEGYAIPSSRAGLWYNPSEPVRIT 550
           KL  KA YDFTT TE KS+KIFD R E SPTQKKLQK+GY+IP+SRAG+ Y  SEP+RIT
Sbjct: 382 KLMAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQKQGYSIPNSRAGIGYQSSEPIRIT 441

Query: 551 RKW--KVADAHHITIEEMRDPKDKKNDDSQKISVFDRIKAPTTRLSVHRRLKYSSSEKEG 610
            K   KV +  HIT+EE +D K+ K D SQ+ SVFDRI     R SV +R+  S ++   
Sbjct: 442 GKGKAKVTNTCHITVEESKDSKEGKKDRSQRSSVFDRIAFSAIRPSVFQRVSTSIAKDSN 501

Query: 611 QSKTSAPTRHSVFHRLSVSTSK-----KVDETSRSVFDRLQATYGQYKGKLKSLETEESD 670
           Q  T + TR S F RL+ +  K         T +S F RL     + + K     + +S 
Sbjct: 502 QVSTCSSTRLSAFQRLNTNAKKVQSISPTSTTRKSAFKRLSVLVTKGQKKASISVSNKSS 561

Query: 671 EMNDNNGFSSTVPSRMKRKPFVLINTE 684
            +  +    S  PSRMKRK FV +NTE
Sbjct: 562 LVTGDEEIRSAFPSRMKRKMFVSVNTE 586

[Close]

BLAST of Spg008244 vs. NCBI nr
Match: KAA0060609.1 (uncharacterized protein E6C27_scaffold22G004870 [Cucumis melo var. makuwa])

HSP 1 Score: 247.3 bits (630), Expect = 3.9e-61
Identity = 155/327 (47.40%), Postives = 195/327 (59.63%), Query Frame = 0


Query: 371 TLKRSNVSHVPDLQEHKCASSNVPAKSKAPKEE-------ASSNVPILRYIPLSRRKKGE 430
           T K+SN  +  + Q++    S    K +AP+ E         SN P+LRYIPLSRRKKGE
Sbjct: 262 TSKKSNKGNTLNSQQN--GESTTETKLRAPEAEKIATLQKEVSNPPVLRYIPLSRRKKGE 321

Query: 431 SPFIECSGIFKVGDVEILKENFTTPLTAITKQEIQESKTDRTKVTLPERRAKAGFDPNAY 490
           SPF ECS    V + EILKENFT PLT I K E ++ +    +  LPERR   GFDP AY
Sbjct: 322 SPFAECSKNPTVKNTEILKENFTAPLTKIEKGEAKKIEKKELEAYLPERRTVEGFDPKAY 381

Query: 491 KLQEKARYDFTTHTEFKSLKIFDGRSEPSPTQKKLQKEGYAIPSSRAGLWYNPSEPVRIT 550
           KL  KA YDFTT TE KS+KIFD R E SPTQKKLQK+GY+IP+SRAG+ Y  SEP+RIT
Sbjct: 382 KLMAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQKQGYSIPNSRAGIGYQSSEPIRIT 441

Query: 551 RKW--KVADAHHITIEEMRDPKDKKNDDSQKISVFDRIKAPTTRLSVHRRLKYSSSEKEG 610
            K   KV +  HIT+EE +D K+ K D SQ+ SVFDRI     R SV +R+  S ++   
Sbjct: 442 GKGKAKVTNTCHITVEESKDSKEGKKDRSQRSSVFDRIAFSAIRPSVFQRVSTSIAKDSN 501

Query: 611 QSKTSAPTRHSVFHRLS-----VSTSKKVDETSRSVFDRLQATYGQYKGKLKSLETEESD 670
           Q  T + TR S F RL+     V +      T +S F RL  +  + + K     + +S 
Sbjct: 502 QVSTCSSTRLSAFQRLNTNAKIVQSISPTSTTRKSAFKRLSVSVTKGQKKASISVSNKSS 561

Query: 671 EMNDNNGFSSTVPSRMKRKPFVLINTE 684
            +  +    S  PSRMKRK FV +NTE
Sbjct: 562 LVTGDEEICSAFPSRMKRKMFVSVNTE 586

[Close]

BLAST of Spg008244 vs. NCBI nr
Match: KAA0053731.1 (uncharacterized protein E6C27_scaffold135G001080 [Cucumis melo var. makuwa])

HSP 1 Score: 246.1 bits (627), Expect = 8.7e-61
Identity = 158/329 (48.02%), Postives = 195/329 (59.27%), Query Frame = 0


Query: 371  TLKRSNVSHVPDLQEHKCASSNVPAKSKAPKEE-------ASSNVPILRYIPLSRRKKGE 430
            T K+SN     + Q++    S    K +AP+ E         SN P+LRYIPLSRRKKGE
Sbjct: 772  TSKKSNKGDALNSQQN--GESTTETKLRAPEAEKIATLRKEVSNFPVLRYIPLSRRKKGE 831

Query: 431  SPFIECSGIFKVGDVEILKENFTTPLTAITKQEIQESKTDRTKVTLPERRAKAGFDPNAY 490
            SPF ECS    V + EILKENF  PLT I K E ++ +    +  LPERR   GF+P AY
Sbjct: 832  SPFAECSKNLTVKNTEILKENFIAPLTKIEKGEAKKIEKKDLEAYLPERRTVEGFNPKAY 891

Query: 491  KLQEKARYDFTTHTEFKSLKIFDGRSEPSPTQKKLQKEGYAIPSSRAGLWYNPSEPVRIT 550
            KL  KA YDFTT TE KS+KIFD R E SPTQ KLQK+GY+IP+SRAG+ Y  SEPVRIT
Sbjct: 892  KLMAKAGYDFTTRTELKSVKIFDERPELSPTQTKLQKQGYSIPNSRAGIGYQSSEPVRIT 951

Query: 551  --RKWKVADAHHITIEEMRDPKDKKNDDSQKISVFDRIKAPTTRLSVHRRLKYSSSEKEG 610
               K KVA+  HIT+EE +D K+ K D SQ+ SVFDRI     RLSV +R+  S ++   
Sbjct: 952  GKGKTKVANTCHITVEESKDSKEGKKDRSQRSSVFDRIALSAVRLSVFQRVSTSITKDSN 1011

Query: 611  QSKTSAPTRHSVFHRLSVSTSK-----KVDETSRSVFD--RLQATYGQYKGKLKSLETEE 670
            Q  T + TR S F RL+ +  K         T +S F   RL  T GQ K  +    + +
Sbjct: 1012 QVSTCSSTRLSAFQRLNTNAKKVQSISPTPTTRKSAFKSLRLSVTRGQKKASIS--VSNK 1071

Query: 671  SDEMNDNNGFSSTVPSRMKRKPFVLINTE 684
            S  +  +    S  PSRMKRK FV +NTE
Sbjct: 1072 SSLVTRDEEIRSAFPSRMKRKMFVSVNTE 1096

[Close]

BLAST of Spg008244 vs. ExPASy Swiss-Prot
Match: Q8S950 (Kinesin-like protein NACK1 OS=Nicotiana tabacum OX=4097 GN=NACK1 PE=1 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 2.4e-21
Identity = 49/74 (66.22%), Postives = 63/74 (85.14%), Query Frame = 0


Query: 1  MTIKTPATPASKIERTPASTPGGPRSKEEKIVVTVRLRPLSKKEQQAKDQMAWECTDDNT 60
          MT++TP TPASKI++TPA+TP G R +EEKIVVTVRLRPL+K+E  AKD  AWEC DD+T
Sbjct: 1  MTVRTPGTPASKIDKTPATTPNGHRGREEKIVVTVRLRPLNKRELSAKDHAAWECIDDHT 60

Query: 61 IVYKPQPQEQSKKP 75
          I+Y+P PQE++ +P
Sbjct: 61 IIYRPVPQERAAQP 74

[Close]

BLAST of Spg008244 vs. ExPASy Swiss-Prot
Match: Q8S905 (Kinesin-like protein KIN-7A OS=Arabidopsis thaliana OX=3702 GN=KIN7A PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 1.3e-14
Identity = 79/219 (36.07%), Postives = 115/219 (52.51%), Query Frame = 0


Query: 1   MTIKTPATPASKIERTPASTPGG-PRSKEEKIVVTVRLRPLSKKEQQAKDQMAWECTDDN 60
           MTIKTP TP SK++RTPA TPGG  RS+EEKIVVTVRLRP++K+E  AKDQ+AWEC +D+
Sbjct: 1   MTIKTPGTPVSKMDRTPAVTPGGSSRSREEKIVVTVRLRPMNKRELLAKDQVAWECVNDH 60

Query: 61  TIVYKPQPQEQSKKPEPRAFSQGLESSEVREFREFRRSKIQNSAISRLRRSNDWKTPKNQ 120
           TIV KPQ QE+        F +      + E        ++N A+S L   N       Q
Sbjct: 61  TIVSKPQVQERLHHQSSFTFDKVFGPESLTE--NVYEDGVKNVALSALMGINATIFAYGQ 120

Query: 121 PRSKETQHEDSQTPVIANKMLRRMTESAQLEIATAKNLMLGKFISSSQQPNETSSPDVMS 180
             S +T      T    N +   + ++ + +  T K       IS  +  NE    +V  
Sbjct: 121 TSSGKTYTMRGVTEKAVNDIYNHIIKTPERDF-TIK-------ISGLEIYNE----NVRD 180

Query: 181 VMMTDVGTSEERMAEVEKKISMLLKMAEEKDQEIASLRN 219
           ++ +D G + + + + EK  +++ K+ EE       LR+
Sbjct: 181 LLNSDSGRALKLLDDPEKG-TVVEKLVEETANNDNHLRH 204

[Close]

BLAST of Spg008244 vs. ExPASy Swiss-Prot
Match: Q9AWM8 (Kinesin-like protein KIN-7A OS=Oryza sativa subsp. japonica OX=39947 GN=KIN7A PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 5.0e-11
Identity = 72/230 (31.30%), Postives = 110/230 (47.83%), Query Frame = 0


Query: 4   KTPATPASKIERTPASTP---GGPRSKEEKIVVTVRLRPLSKKEQQAKDQMAWECTDDNT 63
           + P+TPASKIERTP STP   G  R KEEKI VTVR+RPLSKKE   KDQ+AWEC D+ T
Sbjct: 5   RPPSTPASKIERTPMSTPTPGGSTRVKEEKIFVTVRVRPLSKKELALKDQVAWECDDNQT 64

Query: 64  IVYKPQPQEQSKKPEPRAFSQGLESSEVREFREFRRSKIQNSAISRLRRSNDWKTPKNQP 123
           I+YK  PQ+++    P +++         +         ++ A+S L   N       Q 
Sbjct: 65  ILYKGPPQDRA---APTSYTFDKVFGPASQTEVVYEEGAKDVAMSALTGINATIFAYGQT 124

Query: 124 RSKETQHEDSQTPVIANKMLRRMTESAQLEIATAKNLM--LGKFISSSQQPNETS----- 183
            S +T      T    N + R +  + + +     + M    + +    +P  T+     
Sbjct: 125 SSGKTFTMRGVTESAVNDIYRHIENTPERDFIIKISAMEIYNEIVKDLLRPESTNLRLLD 184

Query: 184 SPDVMSVMMTDVGTSEERMAEVEKKISMLLKMAEEKDQEIASLRNQMESR 224
            P+  ++    V   EE +A+  + +  L+ + EE+ Q   +  N   SR
Sbjct: 185 DPEKGTI----VEKLEEEIAKDSQHLRHLISICEEQRQVGETALNDTSSR 227

[Close]

BLAST of Spg008244 vs. ExPASy Swiss-Prot
Match: Q8LNZ2 (Kinesin-like protein KIN-7B OS=Arabidopsis thaliana OX=3702 GN=KIN7B PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 6.1e-09
Identity = 35/69 (50.72%), Postives = 46/69 (66.67%), Query Frame = 0


Query: 6  PATPASKIERTPASTPGGPRSKEEKIVVTVRLRPLSKKEQQAKDQMAWECTDDNTIVYK- 65
          P TP SKI+++   TP G +  EEKI+VTVR+RPL+ +E    D +AWEC DD TIV+K 
Sbjct: 5  PRTPLSKIDKSNPYTPCGSKVTEEKILVTVRMRPLNWREHAKYDLIAWECPDDETIVFKN 64

Query: 66 PQPQEQSKK 74
          P P +   K
Sbjct: 65 PNPDKAPTK 73

[Close]

BLAST of Spg008244 vs. ExPASy Swiss-Prot
Match: Q8S949 (Kinesin-like protein NACK2 OS=Nicotiana tabacum OX=4097 GN=NACK2 PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.8e-08
Identity = 40/80 (50.00%), Postives = 50/80 (62.50%), Query Frame = 0


Query: 1  MTIKTP-ATPASKIERTPASTPGGPRS-----KEEKIVVTVRLRPLSKKEQQAKDQMAWE 60
          M I TP  TP SKI RTP+  PG  R+     +EEKI+VT+R+RPLS KEQ A D +AW+
Sbjct: 1  MVIGTPVTTPLSKIVRTPSRVPGSRRTTPSKIREEKILVTIRVRPLSPKEQAAYDLIAWD 60

Query: 61 CTDDNTIVYKPQPQEQSKKP 75
            D+ TIV K    E+   P
Sbjct: 61 FPDEQTIVSKNLNHERHTGP 80

[Close]

BLAST of Spg008244 vs. ExPASy TrEMBL
Match: A0A5D3C0W6 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G002360 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 1.5e-63
Identity = 210/637 (32.97%), Postives = 285/637 (44.74%), Query Frame = 0


Query: 236 QDQLEFVENEEEGWTLVTRRKKQKKHSVQRESHMFRNYRRKNMSQKQKRKIKGSRKPKLV 295
           Q++   +E ++E WT+VTRRKK+K   +Q+E   +RNYRR N +QK K+K K +RK KL+
Sbjct: 364 QEKERLIEEDDERWTIVTRRKKRKSTPIQKEHRFYRNYRRWNKAQKNKKK-KKTRKLKLM 423

Query: 296 VEENQDFVLSRHPVTLKDFFPKSFLNDDHEDILEIVACHAVNAFEEGN------------ 355
            +E++DF  ++  +TL DFFP  FL D  ++   +VACHA+NA EE +            
Sbjct: 424 HKEDKDFPRTQRLITLADFFPTRFLGDHQDENPGVVACHAINATEEESIPLRSLEEEKVS 483

Query: 356 -------------------------------SSSSPSQL--------------------- 415
                                          SSSS S +                     
Sbjct: 484 KDLSRFNVDDLLSLPQEIKTILINALLNSAASSSSASTVTYESTPYCMSIDFSNDDLLLG 543

Query: 416 ------PVGPNG-PADQKLQRYAI-----VETLKRSNV---------------------- 475
                 P+  +G   +Q++ R  +     V  + +S +                      
Sbjct: 544 SKLHNRPLYVSGYVREQRVDRILVDNGSAVNIMPKSTIRQLGILMKELSNSKLVIQGFNQ 603

Query: 476 -----------------------SHVPD-------------------------------- 535
                                  SH  D                                
Sbjct: 604 GSQRVIDGVKKVEADSNPFSEAESHFADAKFYLKNDSSPEVVSVEVPLVNREDNLQLKSL 663

Query: 536 -----------LQEHKCASSNVPAKSKAPKEEASSNVPILRYIPLSRRKKGESPFIECSG 595
                          K  +S   AKS    +E +SN  ILRY+PLSRRKKGESPF+E   
Sbjct: 664 ASKEPHISIGTFHSEKSEASTSTAKSVILMDEKTSNPSILRYVPLSRRKKGESPFVESPQ 723

Query: 596 IFKVGDVEILKENFTTPLTAITKQEIQESKTDRTKVTLPERRAKAGFDPNAYKLQEKARY 655
             KVGD+E+LKE+FTTPLT ITKQEI   K D T+ +LP+RR K  FDP AYKL  KA Y
Sbjct: 724 GLKVGDIEVLKESFTTPLTKITKQEI---KIDLTEASLPQRRTKDEFDPKAYKLMAKAGY 783

Query: 656 DFTTHTEFKSLKIFDGRSEPSPTQKKLQKEGYAIPSSRAGLWYNPSEPVRITRKW--KVA 682
           DFTTHTEFKSLKI + + + S TQKKL +EG+AIP SR GL Y   EP+RITRK   K+ 
Sbjct: 784 DFTTHTEFKSLKIHE-QPKLSSTQKKLLREGHAIPMSRKGLGYKLPEPIRITRKGKEKMV 843

[Close]

BLAST of Spg008244 vs. ExPASy TrEMBL
Match: A0A5D3BY54 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G001700 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 4.5e-63
Identity = 207/599 (34.56%), Postives = 297/599 (49.58%), Query Frame = 0


Query: 115 TPKNQPRSKETQHEDSQTPVIANKMLRRMTESAQLEIATAKNLMLGKFISSSQQPNETSS 174
           TP    + KE + E      IA+ ML ++ E   +++   K          S+Q      
Sbjct: 372 TPLKFSKRKEGRAEKKDDGNIAD-MLEQLLEKQLIQLPECKR---------SEQAGNVDD 431

Query: 175 PDVMSVMMTDVGTSEERMAEVEKKISMLLKMAEEKDQEIASLRNQMESRDVAELKSVKDI 234
           P+            E+     E    ++L++A EK  ++          D+ E  + +D 
Sbjct: 432 PNYCKYHRVISHPVEKYFVLKE----LILRLAREKKIKL----------DLEEEVTPED- 491

Query: 235 FQDQLEFVENEEEGWTLVTRRKKQKKHSVQRESHMFRNYRRKNMSQKQKRKIKGSRKPKL 294
            Q++   +E ++EGWT+VTRRKK+K   +Q+ES ++ NYRR N +QK K+K K +RK KL
Sbjct: 492 SQEKERLIEEDDEGWTVVTRRKKRKSTLIQKESRLYINYRRGNKTQKNKKK-KKTRKLKL 551

Query: 295 VVEENQDFVLSRHPVTLKDFFPKSFLNDDHEDILEIVACHAVNAFEEGNSSSSPSQLPVG 354
           V E+++DF  ++  VTL DFFP  FL D  ++   +VA  + ++       S+P  + + 
Sbjct: 552 VHEKDKDFPRTQRVVTLADFFPTRFLGDHQDENPGVVASASSSSAPIATYESTPYCMSID 611

Query: 355 ------------PNGP-------ADQKLQRYAI-----VETLKRSNVSHVPDLQEH---- 414
                        N P        +Q+++R  +     V  + +S +  +  L E     
Sbjct: 612 FSDEDLLLGSKLHNRPLYVSGYVQEQRVERILVDNGSAVNIMPKSTMRQLGILMEELSNS 671

Query: 415 ------------------------------------------------------------ 474
                                                                       
Sbjct: 672 KLVIQGFNQGSQRVIDAKFYLKNDGSPEVVSVEVPLVNKEDNLQLKSLASRESHKSTGTF 731

Query: 475 ---KCASSNVPAKSKAPKEEASSNVPILRYIPLSRRKKGESPFIECSGIFKVGDVEILKE 534
              K  +S   AKS    +E +SN PILRY+PLSRRKKGESPF+E     KVGD+E+LKE
Sbjct: 732 HSGKSEASTSTAKSVIVMDEKTSNPPILRYVPLSRRKKGESPFVEFPQGLKVGDIEVLKE 791

Query: 535 NFTTPLTAITKQEIQESKTDRTKVTLPERRAKAGFDPNAYKLQEKARYDFTTHTEFKSLK 594
           +FTTPLT ITKQEI   K D  + +LP+RR K GFDP AYK   KA YDFTTHTEFKSLK
Sbjct: 792 SFTTPLTKITKQEI---KIDLIEASLPQRRTKDGFDPKAYKSMAKAGYDFTTHTEFKSLK 851

Query: 595 IFDGRSEPSPTQKKLQKEGYAIPSSRAGLWYNPSEPVRITRKW--KVADAHHITIEEMRD 621
           I + + + S TQKKL +EG+AIP SR GL Y P EP+RITRK   KV D++HIT++E+ D
Sbjct: 852 IHE-QPKLSSTQKKLLREGHAIPMSRKGLGYKPPEPIRITRKGKEKVVDSNHITVKEV-D 911

[Close]

BLAST of Spg008244 vs. ExPASy TrEMBL
Match: A0A5A7V4F2 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G004870 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 1.9e-61
Identity = 155/327 (47.40%), Postives = 195/327 (59.63%), Query Frame = 0


Query: 371 TLKRSNVSHVPDLQEHKCASSNVPAKSKAPKEE-------ASSNVPILRYIPLSRRKKGE 430
           T K+SN  +  + Q++    S    K +AP+ E         SN P+LRYIPLSRRKKGE
Sbjct: 262 TSKKSNKGNTLNSQQN--GESTTETKLRAPEAEKIATLQKEVSNPPVLRYIPLSRRKKGE 321

Query: 431 SPFIECSGIFKVGDVEILKENFTTPLTAITKQEIQESKTDRTKVTLPERRAKAGFDPNAY 490
           SPF ECS    V + EILKENFT PLT I K E ++ +    +  LPERR   GFDP AY
Sbjct: 322 SPFAECSKNPTVKNTEILKENFTAPLTKIEKGEAKKIEKKELEAYLPERRTVEGFDPKAY 381

Query: 491 KLQEKARYDFTTHTEFKSLKIFDGRSEPSPTQKKLQKEGYAIPSSRAGLWYNPSEPVRIT 550
           KL  KA YDFTT TE KS+KIFD R E SPTQKKLQK+GY+IP+SRAG+ Y  SEP+RIT
Sbjct: 382 KLMAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQKQGYSIPNSRAGIGYQSSEPIRIT 441

Query: 551 RKW--KVADAHHITIEEMRDPKDKKNDDSQKISVFDRIKAPTTRLSVHRRLKYSSSEKEG 610
            K   KV +  HIT+EE +D K+ K D SQ+ SVFDRI     R SV +R+  S ++   
Sbjct: 442 GKGKAKVTNTCHITVEESKDSKEGKKDRSQRSSVFDRIAFSAIRPSVFQRVSTSIAKDSN 501

Query: 611 QSKTSAPTRHSVFHRLS-----VSTSKKVDETSRSVFDRLQATYGQYKGKLKSLETEESD 670
           Q  T + TR S F RL+     V +      T +S F RL  +  + + K     + +S 
Sbjct: 502 QVSTCSSTRLSAFQRLNTNAKIVQSISPTSTTRKSAFKRLSVSVTKGQKKASISVSNKSS 561

Query: 671 EMNDNNGFSSTVPSRMKRKPFVLINTE 684
            +  +    S  PSRMKRK FV +NTE
Sbjct: 562 LVTGDEEICSAFPSRMKRKMFVSVNTE 586

[Close]

BLAST of Spg008244 vs. ExPASy TrEMBL
Match: A0A5D3BTY1 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00630 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 1.9e-61
Identity = 155/327 (47.40%), Postives = 194/327 (59.33%), Query Frame = 0


Query: 371 TLKRSNVSHVPDLQEHKCASSNVPAKSKAPKEE-------ASSNVPILRYIPLSRRKKGE 430
           T K+SN  +  + Q++    S    K +AP+ E         SN P+LRYIPLSRRKKGE
Sbjct: 262 TSKKSNKGNTLNSQQN--GESTTETKLRAPEAEKIATLQKEVSNPPVLRYIPLSRRKKGE 321

Query: 431 SPFIECSGIFKVGDVEILKENFTTPLTAITKQEIQESKTDRTKVTLPERRAKAGFDPNAY 490
           SPF ECS    V + EILKENFT PLT I K E ++ +    +  LPERR   GFDP AY
Sbjct: 322 SPFAECSKNPTVKNTEILKENFTPPLTKIEKGEAKKIEKKELEAYLPERRTVEGFDPKAY 381

Query: 491 KLQEKARYDFTTHTEFKSLKIFDGRSEPSPTQKKLQKEGYAIPSSRAGLWYNPSEPVRIT 550
           KL  KA YDFTT TE KS+KIFD R E SPTQKKLQK+GY+IP+SRAG+ Y  SEP+RIT
Sbjct: 382 KLMAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQKQGYSIPNSRAGIGYQSSEPIRIT 441

Query: 551 RKW--KVADAHHITIEEMRDPKDKKNDDSQKISVFDRIKAPTTRLSVHRRLKYSSSEKEG 610
            K   KV +  HIT+EE +D K+ K D SQ+ SVFDRI     R SV +R+  S ++   
Sbjct: 442 GKGKAKVTNTCHITVEESKDSKEGKKDRSQRSSVFDRIAFSAIRPSVFQRVSTSIAKDSN 501

Query: 611 QSKTSAPTRHSVFHRLSVSTSK-----KVDETSRSVFDRLQATYGQYKGKLKSLETEESD 670
           Q  T + TR S F RL+ +  K         T +S F RL     + + K     + +S 
Sbjct: 502 QVSTCSSTRLSAFQRLNTNAKKVQSISPTSTTRKSAFKRLSVLVTKGQKKASISVSNKSS 561

Query: 671 EMNDNNGFSSTVPSRMKRKPFVLINTE 684
            +  +    S  PSRMKRK FV +NTE
Sbjct: 562 LVTGDEEIRSAFPSRMKRKMFVSVNTE 586

[Close]

BLAST of Spg008244 vs. ExPASy TrEMBL
Match: A0A5A7UJR2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold135G001080 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 4.2e-61
Identity = 158/329 (48.02%), Postives = 195/329 (59.27%), Query Frame = 0


Query: 371  TLKRSNVSHVPDLQEHKCASSNVPAKSKAPKEE-------ASSNVPILRYIPLSRRKKGE 430
            T K+SN     + Q++    S    K +AP+ E         SN P+LRYIPLSRRKKGE
Sbjct: 772  TSKKSNKGDALNSQQN--GESTTETKLRAPEAEKIATLRKEVSNFPVLRYIPLSRRKKGE 831

Query: 431  SPFIECSGIFKVGDVEILKENFTTPLTAITKQEIQESKTDRTKVTLPERRAKAGFDPNAY 490
            SPF ECS    V + EILKENF  PLT I K E ++ +    +  LPERR   GF+P AY
Sbjct: 832  SPFAECSKNLTVKNTEILKENFIAPLTKIEKGEAKKIEKKDLEAYLPERRTVEGFNPKAY 891

Query: 491  KLQEKARYDFTTHTEFKSLKIFDGRSEPSPTQKKLQKEGYAIPSSRAGLWYNPSEPVRIT 550
            KL  KA YDFTT TE KS+KIFD R E SPTQ KLQK+GY+IP+SRAG+ Y  SEPVRIT
Sbjct: 892  KLMAKAGYDFTTRTELKSVKIFDERPELSPTQTKLQKQGYSIPNSRAGIGYQSSEPVRIT 951

Query: 551  --RKWKVADAHHITIEEMRDPKDKKNDDSQKISVFDRIKAPTTRLSVHRRLKYSSSEKEG 610
               K KVA+  HIT+EE +D K+ K D SQ+ SVFDRI     RLSV +R+  S ++   
Sbjct: 952  GKGKTKVANTCHITVEESKDSKEGKKDRSQRSSVFDRIALSAVRLSVFQRVSTSITKDSN 1011

Query: 611  QSKTSAPTRHSVFHRLSVSTSK-----KVDETSRSVFD--RLQATYGQYKGKLKSLETEE 670
            Q  T + TR S F RL+ +  K         T +S F   RL  T GQ K  +    + +
Sbjct: 1012 QVSTCSSTRLSAFQRLNTNAKKVQSISPTPTTRKSAFKSLRLSVTRGQKKASIS--VSNK 1071

Query: 671  SDEMNDNNGFSSTVPSRMKRKPFVLINTE 684
            S  +  +    S  PSRMKRK FV +NTE
Sbjct: 1072 SSLVTRDEEIRSAFPSRMKRKMFVSVNTE 1096

[Close]

BLAST of Spg008244 vs. TAIR 10
Match: AT1G18370.1 (ATP binding microtubule motor family protein )

HSP 1 Score: 83.2 bits (204), Expect = 9.1e-16
Identity = 79/219 (36.07%), Postives = 115/219 (52.51%), Query Frame = 0


Query: 1   MTIKTPATPASKIERTPASTPGG-PRSKEEKIVVTVRLRPLSKKEQQAKDQMAWECTDDN 60
           MTIKTP TP SK++RTPA TPGG  RS+EEKIVVTVRLRP++K+E  AKDQ+AWEC +D+
Sbjct: 1   MTIKTPGTPVSKMDRTPAVTPGGSSRSREEKIVVTVRLRPMNKRELLAKDQVAWECVNDH 60

Query: 61  TIVYKPQPQEQSKKPEPRAFSQGLESSEVREFREFRRSKIQNSAISRLRRSNDWKTPKNQ 120
           TIV KPQ QE+        F +      + E        ++N A+S L   N       Q
Sbjct: 61  TIVSKPQVQERLHHQSSFTFDKVFGPESLTE--NVYEDGVKNVALSALMGINATIFAYGQ 120

Query: 121 PRSKETQHEDSQTPVIANKMLRRMTESAQLEIATAKNLMLGKFISSSQQPNETSSPDVMS 180
             S +T      T    N +   + ++ + +  T K       IS  +  NE    +V  
Sbjct: 121 TSSGKTYTMRGVTEKAVNDIYNHIIKTPERDF-TIK-------ISGLEIYNE----NVRD 180

Query: 181 VMMTDVGTSEERMAEVEKKISMLLKMAEEKDQEIASLRN 219
           ++ +D G + + + + EK  +++ K+ EE       LR+
Sbjct: 181 LLNSDSGRALKLLDDPEKG-TVVEKLVEETANNDNHLRH 204

[Close]

BLAST of Spg008244 vs. TAIR 10
Match: AT3G43210.1 (ATP binding microtubule motor family protein )

HSP 1 Score: 64.3 bits (155), Expect = 4.4e-10
Identity = 35/69 (50.72%), Postives = 46/69 (66.67%), Query Frame = 0


Query: 6  PATPASKIERTPASTPGGPRSKEEKIVVTVRLRPLSKKEQQAKDQMAWECTDDNTIVYK- 65
          P TP SKI+++   TP G +  EEKI+VTVR+RPL+ +E    D +AWEC DD TIV+K 
Sbjct: 5  PRTPLSKIDKSNPYTPCGSKVTEEKILVTVRMRPLNWREHAKYDLIAWECPDDETIVFKN 64

Query: 66 PQPQEQSKK 74
          P P +   K
Sbjct: 65 PNPDKAPTK 73

[Close]

BLAST of Spg008244 vs. TAIR 10
Match: AT4G38950.1 (ATP binding microtubule motor family protein )

HSP 1 Score: 50.1 bits (118), Expect = 8.5e-06
Identity = 26/58 (44.83%), Postives = 38/58 (65.52%), Query Frame = 0


Query: 24 PRSKEEKIVVTVRLRPLSKKEQQAKDQMAWECTDDNTIVYKPQPQEQSKKPEPRAFSQ 82
          P ++EEKI+V VRLRPL++KE  A +   WEC +D TI+Y+   +E S  P   +F +
Sbjct: 7  PVAREEKILVLVRLRPLNQKEIAANEAADWECINDTTILYRNTLREGSNFPSAYSFDK 64

[Close]

BLAST of Spg008244 vs. TAIR 10
Match: AT4G38950.2 (ATP binding microtubule motor family protein )

HSP 1 Score: 50.1 bits (118), Expect = 8.5e-06
Identity = 26/58 (44.83%), Postives = 38/58 (65.52%), Query Frame = 0


Query: 24 PRSKEEKIVVTVRLRPLSKKEQQAKDQMAWECTDDNTIVYKPQPQEQSKKPEPRAFSQ 82
          P ++EEKI+V VRLRPL++KE  A +   WEC +D TI+Y+   +E S  P   +F +
Sbjct: 7  PVAREEKILVLVRLRPLNQKEIAANEAADWECINDTTILYRNTLREGSNFPSAYSFDK 64

[Close]

BLAST of Spg008244 vs. TAIR 10
Match: AT2G21300.1 (ATP binding microtubule motor family protein )

HSP 1 Score: 47.8 bits (112), Expect = 4.2e-05
Identity = 24/56 (42.86%), Postives = 37/56 (66.07%), Query Frame = 0


Query: 26 SKEEKIVVTVRLRPLSKKEQQAKDQMAWECTDDNTIVYKPQPQEQSKKPEPRAFSQ 82
          ++EEKI+V VRLRPL++KE  A +   WEC +D T++Y+   +E S  P   +F +
Sbjct: 20 AREEKILVLVRLRPLNEKEILANEAADWECINDTTVLYRNTLREGSTFPSAYSFDR 75

The following BLAST results are available for this feature:

BLAST of Spg008244 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK05005.1	3.2e-63	32.97	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0061113.1	9.3e-63	34.56	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK03782.1 ty3-gyp...	[more]
TYK02262.1	3.9e-61	47.40	uncharacterized protein E5676_scaffold18G00630 [Cucumis melo var. makuwa]	[more]
KAA0060609.1	3.9e-61	47.40	uncharacterized protein E6C27_scaffold22G004870 [Cucumis melo var. makuwa]	[more]
KAA0053731.1	8.7e-61	48.02	uncharacterized protein E6C27_scaffold135G001080 [Cucumis melo var. makuwa]	[more]

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BLAST of Spg008244 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S950	2.4e-21	66.22	Kinesin-like protein NACK1 OS=Nicotiana tabacum OX=4097 GN=NACK1 PE=1 SV=1	[more]
Q8S905	1.3e-14	36.07	Kinesin-like protein KIN-7A OS=Arabidopsis thaliana OX=3702 GN=KIN7A PE=1 SV=1	[more]
Q9AWM8	5.0e-11	31.30	Kinesin-like protein KIN-7A OS=Oryza sativa subsp. japonica OX=39947 GN=KIN7A PE...	[more]
Q8LNZ2	6.1e-09	50.72	Kinesin-like protein KIN-7B OS=Arabidopsis thaliana OX=3702 GN=KIN7B PE=1 SV=1	[more]
Q8S949	1.8e-08	50.00	Kinesin-like protein NACK2 OS=Nicotiana tabacum OX=4097 GN=NACK2 PE=1 SV=1	[more]

BLAST of Spg008244 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C0W6	1.5e-63	32.97	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3BY54	4.5e-63	34.56	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7V4F2	1.9e-61	47.40	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A5D3BTY1	1.9e-61	47.40	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00630 ...	[more]
A0A5A7UJR2	4.2e-61	48.02	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13...	[more]

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BLAST of Spg008244 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G18370.1	9.1e-16	36.07	ATP binding microtubule motor family protein	[more]
AT3G43210.1	4.4e-10	50.72	ATP binding microtubule motor family protein	[more]
AT4G38950.1	8.5e-06	44.83	ATP binding microtubule motor family protein	[more]
AT4G38950.2	8.5e-06	44.83	ATP binding microtubule motor family protein	[more]
AT2G21300.1	4.2e-05	42.86	ATP binding microtubule motor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 225..245
None	No IPR available	COILS	Coil	Coil	coord: 192..219
None	No IPR available	COILS	Coil	Coil	coord: 633..653
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 650..669
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 110..128
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 590..615
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 599..615
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 380..404
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..134
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	PANTHER	PTHR47968:SF23	KINESIN-LIKE PROTEIN KIN-7A	coord: 14..140
None	No IPR available	PANTHER	PTHR47968	CENTROMERE PROTEIN E	coord: 14..140
IPR036961	Kinesin motor domain superfamily	GENE3D	3.40.850.10	Kinesin motor domain	coord: 23..138 e-value: 2.1E-5 score: 25.6

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg008244.1	Spg008244.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090304	nucleic acid metabolic process