Spg008175 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg008175
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold2: 18560576 .. 18562946 (-)
RNA-Seq ExpressionSpg008175
SyntenySpg008175
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATTTTGCCTTACTTCGATACATTGATAAACCTACACCTCCCGGAGGAGAATCAGAAGCTCGAAGAAGGCGAAATCATCAGCCTATGCGCAGAATTTCTCAACGGAATCGTCCATTCCACGGTAGTGGTGATGTAATGGGTGATGGCGAACATCGTCAAATATCCAGAAATCCAAGAGAAGCTATATACAGAGATCAATCGATACAGAGAAGCTATATCCAGAAATCCAAGAGAAGCTATATCTAGAAATCCCGAGCCGGAATCGGGGGGGAGGAGCTCCTCCTCCCCGAATCTCTCTGTTTAAAAAAAAACAGAAGAAAGAAAAGAAAGGAGAAGAAGAGAAGAAGGAAAGAAGAAAGAAAAAAAAAATCCGGCGGCCGACCACCGGAGTGGAAGAAGAAAGTGATGGGAAGGAAGAAGAAGGAGAAGTAAGAGAGAAAGAATTTAAAAAAAAAAATAATAAAATAATAATATTTTAATATTTTAATATATTTTTATTTAAGAAATTTTAAAAGTGATTTTTTTATTAAAATAATGGTGCCACGTCAGCAAACTGGTAGTGTTTAACGGAAAAATGGACGACAGGGACCAAATTGCTCCTTATCTCAAACCTCATGGGTATTTTTGTTGAGTTTGAAAACTCAGGGACTAAAGTGTTACTTAACCCAAACCTCAGGGACCAAAAGTGTATTTTTCCGTTTTTTTTTACTTTATAATTATTACATTATTGTGTTTTTCTTTAATATTATTTAATGTTATTTTTTATAATTAGTATTATTCTTTATCTAAAATGGCGTTAATTTGTATATTAAATAGGTTAATTGTTGAGGTTTGAATTCAAAATTAAATTTGATATTCAATTGAATCAAATTATCAAATTGAATCATGTGGATTATAATAATTGACTTTAATTATATTTACGACAATTATACTAAAAAAATAATTATACTTAAGCTAACCTAAAAAACGATTACACTTAATTACATATATTTTGTATTTAATTATATTAACAACCATTATACTAACGATTTTATAATTCATGAAAAATATAATTATACTTTTTTTAGATGAAAAAAAACGATTATACTTGATTATATATATTCTATCAAAACTTGTTAACAATTAGGTCATTAAATATAAAGATGTAAACATACTAAATGTAACGACCCAACTAAATAGGAACTTAAAACATGTTGAAGGTCGCTACTACATGCATGAAAACATAAAACTGTTGATACTTTAAAGTGAAAGAGACCAAAAGTAAAATATTTTATTTAACAAACTGGGCTCAACACTGAGAATCATTTTACAATAAAAGCAGCCAAAAACATGATAGACAAATTTTCACAAAGTTGAAAATTTAAAACATCTAAAAGCATGAAACTAGGAAACTCGATCCTAGACTTCTAGGGACATGATTTGCAGTTGCATCCCATAGCCTGTCAAGTTACCGCCCTCGCCACTCGCCTGTCATCAAGTACCACCTGAAAAGGAAAGTCATGTAGCATGGGTGAGTATAAAAATATACTCAATAAGTAGCTCACTTAAAGGATGAAACTGATGGCATGAAAAACTATTAGCATGAAACTAACTTGGGTCTTAACATCATAGGGACCCAATTGGAATCATTCATTCGGGTTTCTAACCCTAGGGCCATAACAGGGTACATGGAATATTTCGTCTAGGGTGATTACATATCCCCAACCTATGCCAACTAAAGTGTTGTGTGGGTTAGTTGAGTAAGACAAGTAAACTAGAGACTAGCTGACAACCTCTAGCAGAACTACACCTATCCCAACACAACACCCCTGAATCATGAACATAAAATACAGTGGAGCAATCTGGTGCATGTAAACATGCCTGAGTGCCATATGGCGCATGAAAACGTGCCTGCTAAGCCAACTATGGTATGGCGTGGGTCAATCATGTAAGGCAAAGTAAACCAAAGGCTAGCTGACACCCCTCTAGCAAAACTATACCTCTCCCAACACTATACCTCTGAAACATATGTTGGGTTTTATGCCCTAAAACTCGTAGATAGTAAATGTAACATTTTACCGAACATTAATAAAATAGTTTATTTTGTTTGTATTTAGTAGATCTTGTCTTATTAACCCTGATCCAATAAACTAAACATCCTAGGCTGATAGTATGAGGCTTGAACTAGTATGTAGGGACATACAGGAAACAATGTTCAAGATTCAACCTAAAGGGTCTGTAGTGTAGGGATAAGGTTGGGTACCTTATCCTGGTGACACTATGGATACGACCCGCTTCGTATTATGATACAAACGCAATGATCCAACGCGTTCATGTAGTTGACATGCGAGTGGGGGTATCCTATGCAATATGCAATGAGTTTGCATAA

mRNA sequence

ATGCATTTTGCCTTACTTCGATACATTGATAAACCTACACCTCCCGGAGGAGAATCAGAAGCTCGAAGAAGGCGAAATCATCAGCCTATGCGCAGAATTTCTCAACGGAATCGTCCATTCCACGGTAGTGGTGATCCTGTCAAGTTACCGCCCTCGCCACTCGCCTGTCATCAAGTACCACCTGAAAAGGAAAGTCATGTAGCATGGTGGAGCAATCTGGTGCATGTAAACATGCCTGAGTGCCATATGGCGCATGAAAACGTGCCTGCTAAGCCAACTATGGTATGGCGTGGGTCAATCATGGATAAGGTTGGGTACCTTATCCTGGTGACACTATGGATACGACCCGCTTCGTATTATGATACAAACGCAATGATCCAACGCGTTCATGTAGTTGACATGCGAGTGGGGGTATCCTATGCAATATGCAATGAGTTTGCATAA

Coding sequence (CDS)

ATGCATTTTGCCTTACTTCGATACATTGATAAACCTACACCTCCCGGAGGAGAATCAGAAGCTCGAAGAAGGCGAAATCATCAGCCTATGCGCAGAATTTCTCAACGGAATCGTCCATTCCACGGTAGTGGTGATCCTGTCAAGTTACCGCCCTCGCCACTCGCCTGTCATCAAGTACCACCTGAAAAGGAAAGTCATGTAGCATGGTGGAGCAATCTGGTGCATGTAAACATGCCTGAGTGCCATATGGCGCATGAAAACGTGCCTGCTAAGCCAACTATGGTATGGCGTGGGTCAATCATGGATAAGGTTGGGTACCTTATCCTGGTGACACTATGGATACGACCCGCTTCGTATTATGATACAAACGCAATGATCCAACGCGTTCATGTAGTTGACATGCGAGTGGGGGTATCCTATGCAATATGCAATGAGTTTGCATAA

Protein sequence

MHFALLRYIDKPTPPGGESEARRRRNHQPMRRISQRNRPFHGSGDPVKLPPSPLACHQVPPEKESHVAWWSNLVHVNMPECHMAHENVPAKPTMVWRGSIMDKVGYLILVTLWIRPASYYDTNAMIQRVHVVDMRVGVSYAICNEFA
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..52

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg008175.1Spg008175.1mRNA