Spg008099 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg008099
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold1: 53110893 .. 53114618 (-)
RNA-Seq Expression	Spg008099
Synteny	Spg008099

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTGAGACTAGAACTATGGAAGAAAGAATGGCTGAGATGCAGGAGCACATCAACACCTTGATGAAGGCGATTGAAGAAAAAGATTCTCAAATTGAGCAACTAAAGAGCCAAATTGAGAACCAACATATCGCCGAATCAAGTCAAACCCAAGTCAAAAAAATCATGACAAAGGAAAGACTATAGTGCAAGATGATCAGCCACAGTGTTCTACTTCGATCGCTTCACTATCCATCCAACAGCTCCAAGATATGATCACAAACTGTATCAGAGCTCAGTACGGTGGACCTACTCAAGATTCCCTATTGTATTCCAAACCTTATACTAAGAGAATTGATAACTTGAGAACGCCAATCGGGTATCAGCCACCGAAATTTCAGCAGTTTGATGGAAAGGGCAATCCTAAACAACATATTGCCCACTTCGTTGAGACATGCGAGAACGCTGGTACTCGAGGGGACCTACTAGTCAAACAGTTCGTTCGAACACTTAAAGGAAATGCTTTTGACTGGTACACTGATCTAGAACATGAGTTAATAGACAGTTGGGAGGAACTCGAAAGGGAGTTTTTGAATCGCTTCTACAGCACTAGACGAACCGTTAGCATGTTCGAGCTCACAAACACTAAACAACGAAAAGGTGAACTCGTTGTTAACTATATAAATCTCTGGAGAGCTACGAGTCTAGATTGCAAAGATCGCCTCACTGAACTCTCTTCCATTGAGATGTGCATTCAAGGCATGCACTGAGAACTCCTCTACATCCTTAAGGGTATAAAGCCTCGCACCTTTGAGGAACTAGCAACTCGCGCCCACGATATGGAGCTAAGTATTGCTAGTCGAGAAAACCAAGACCTTCTCCTCTCTAACGTGAGAAAAGAAGGAAGGAATGACGAAGAGACTATAGAAGAATCTATGGTTGTCAACACAACCCTTCCCAAGTCGTCTTCGAAAGAAAAGCGACAAACAAATGGAGCGCATCACTTAACCTTAAAGGAAAGACAGAAGAAAATCTATCCTTTCCCTGATGCCGACATCCCTGATATGTTGGAACAACTATTGGAAGCGCAACTGATAGAGCTTCCTAAGTGTAAACGACTAGAAGAGATGGAGAAAGTCGATGATCTCAAGTATTGCAAGTATCATCGAGTTATTGGTCATCCAGTGGAAAGATGTTTCGTCCTAAAGGACTTAATTCTAAAGCTAGCAATGGAAGAAAAAATTGAGCTCGACCTTGATGAAGTAGCTCAATCAAATCTTGCTACAATCAAAGAAAAGAGCAAGCATCAAAGAAAGAAGGATCTTAAGAAACTTCAACCCAAGAGGCAGAGAATTAAAAAGTTTTCTCAACCTCGACAACCGGTGACTGCGAAGGAACTCTTCTCCAAAACTTCCCGCAAAAAGGAAAAGGGAAACTTTGCAACTTCCTACTGCATCCATGCAGAAGAGGTTGACAGTTCTAAGAAGAGTGAACAAAGGACTTCCGTCTTCGATCGCATCAAGCCTCCAACTACTCGTCCTTCGGTATTCCAAAGAATGAGTATGGCCACGACAGAAGAAGAAAATCAATGTTTGGTGTCCACCTTCACTCGACCTTCAGTTTTCCAAAGACTGAGGTCTCCACGTCGAAGAAAAGTCAACCTTCGACATCTGTTTTTGATCGCCTCAAAGTAACAAGCGATCAACCTAAAAGAAAGATGGATAACTTGGAGGTGAAACTTTTCGATGAAGTAAATAGCGACAAGAAACTTCAAAGTAGCGTTCCGTCACGTATGAAGAGAAAGTTCTCTCTTCTCATAAATACAGAAGGTTCCTTGAAGGTGAAACCAAATCTCATTATCTTGACCAATCCTACAAGTCAAGGATCTGATCAAGACCATGATGAAGATAAGGGCTTTTAAAATGTAAAAGCTCCTTATCGCAAGAGCCTAAACTGCATGATGCTCCTAGACCACAGGAGCTTAAAAGGTGAGAGCAAAAAAAAAAAAAATCTTGAACTACGTGATGACTTGATCCCTATTCCTCAAGGGTACGTAGGCAGCTTAATGAAAATTTTAAGTTCAGTCTCTGCAAATAAATAAAAAGAAGGTGCAATAAATATTGAAGCACGATAAGACAAGTTGAAGAAACTCATCACTACTGGGGGCAACACAACAAATTGAAGTTATGCATCATTATCAATGTGAAGCTACGAGTTGGATGAATAAATGAGAACTTCATTCCTCCAAATTCAATGTCTCGTTAGCCTCAAGTTCGGGGTTTTCACTCACCCTAAGTTCGTGTTCCCTCTTCGTCAAGTTCGAAGGTTCTCACGTGCTTCGCTGCAGTTCCTTCTCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCTCTCAATGTTCGAAGGTTCTCAAGCGTTTCGCTGTAGTTTCACGCGCTTCGCTGCAGTTCCTTCCTCTAAGTTTGAAGGTTCTCACGCGCTTCGCTGCAATTCCTTCCTCCAAGTTCGAAGGTTCTCACGCATTTCACTACAGTTCCTCCTCCCCAAGTTCGAAGGTTTTCACACACTTTGATGCAGTTCCTTCTCTCCAAGTTCGAAGGTTCTGACACTGCGCTGCTTCCTTCACCACATTCGAAGGTTCTCACGCTGCACTGCCTCGTTGTTCCTTCTCCAAGTTTGAAAGTTCTCACGCTACGCTGCTTCCTTCTCCAAGTTTGAAGGTTCTCATGCTACGCTAGAATGCGCTGCTGCGCTACTTGCTTCTTTAATTTAAGTTCGAAGGTTCCCACATTGCGCTGTTGTGTTGCTTTCTTCACCAAGTTCGAGGGTTTTCACGCTGCGTTGTTGTGCTGCTTTCTTCTCAAGGTTTGAAAGTTTGCGCCCTGTGCTGCTACGCGCTGCTCCATTCTCTCTCCAAGTTTGAAGGTTCTGACGCTGCACTGCTTCTTTCACCACGTTCGAAAGTTCTCACGCTACATTGCTTCGCTATCCTTGTACTAATGCCAAAAGATGTGGCGGCGGCAAAAGTCCAAGGAGCACGTCATGTCCTTGTACTCATGCTGAAAGGCGTGGCGGCGACACAAGTCCAAGGACACGTCCCAAAGTAAGGAACATGTCCATGTACTAATGCTGAAAGACGTGGCGGCGTCAAAAGTCCAAGGAGCACGTCATGTCCTTGTACTAATGCTGAAAGATGTGGCGGCGGCAAAAGTACAAGGAGCACGTCATGTCCTTGTACTAATGCCGAAAGATGTGGCGGCGGCAAAAGTCCAAGGAGCACGTCATGTCCTTGTACTCATGCTGAAAGGCGTGGCGGCGACACAAGTCCAAGGACACGTCCCAAAGTAAGGAACATGTCCATGTACTAATGCTGAAAGACGTGGCGGCGTCAAAAGTCCAAGGAGCACGTCATGTCCTTGTACTAATGCTGAAAGATGTGGCGGCGGCAAAAGTACAAGGAGCACGTCATGTCCTTGTACTAATGCCGAAAGATGTGGCGGCGGCAAAAGTCCAAGGAGCACGTCATGTCCTTGTACTAATGCCGAAAGATGTGGCGGCGGCAAAAGTACAAGGAGCACGTCATGTCCTTGTACTCATGCTGAAAGACGTGGCGGCGGCAAAAGTCCAAGGAGCACGTCATGTCCTTGTACTAATGCTCAAAGATGTGGTGGCGACAAAATTCCAAGGAGCACGTCATGTCCTTGTACTTATGCTGAAAGACATTGTATCTGCAAATTGA

mRNA sequence

ATGACTGAGACTAGAACTATGGAAGAAAGAATGGCTGAGATGCAGGAGCACATCAACACCTTGATGAAGGCGATTGAAGAAAAAGATTCTCAAATTGAGCAACTAAAGAGCCAAATTGAGAACCAACATATCGCCGAATCAAGTCAAACCCAAAGAATTAAAAAGTTTTCTCAACCTCGACAACCGGTGACTGCGAAGGAACTCTTCTCCAAAACTTCCCGCAAAAAGGAAAAGGGAAACTTTGCAACTTCCTACTGCATCCATGCAGAAGAGGTTGACAGTTCTAAGAAGAGTGAACAAAGGACTTCCGTCTTCGATCGCATCAAGCCTCCAACTACTCGTCCTTCGTTCCTTCTCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCTCTCAATGTTCGAAGGTTCTCAAGCGTTTCGCTGTAGTTTCACGCGCTTCGCTGCAGTTCCTTCCTCTAAGTTTGAAGGTTCTCACGCGCTTCGCTGCAATTCCTTCCTCCAAGTTCGAAGGTTCTCACGCATTTCACTACAGTTCCTCCTCCCCAAGTTCGAAGGTTTTCACACACTTTGATGCAGTTCCTTCTCTCCAAGTTCGAAGGTTCTCATGCTACGCTAGAATGCGCTGCTGCGCTACTTGCTTCTTTAATTTAAGTTCGAAGGTTCCCACATTGCGCTGTTGTGTTGCTTTCTTCACCAAGTTCGAGGGTTTTCACGCTGCGTTGTTGTGCTGCTTTCTTCTCAAGGCGTGGCGGCGACACAAGTCCAAGGACACGTCCCAAAGTAAGGAACATGTCCATGTACTAATGCTGAAAGACGTGGCGGCGTCAAAAGTCCAAGGAGCACGTCATGTCCTTGTACTAATGCTGAAAGATGTGGCGGCGGCAAAAGTACAAGGAGCACGTCATGTCCTTGTACTAATGCCGAAAGATGTGGCGGCGGCAAAAGTCCAAGGAGCACGTCATGTCCTTGTACTAATGCCGAAAGATGTGGCGGCGGCAAAAGTACAAGGAGCACGTCATGTCCTTGTACTCATGCTGAAAGACGTGGCGGCGGCAAAAGTCCAAGGAGCACGTCATGTCCTTGTACTAATGCTCAAAGATGTGGTGGCGACAAAATTCCAAGGAGCACGTCATGTCCTTGTACTTATGCTGAAAGACATTGTATCTGCAAATTGA

Coding sequence (CDS)

ATGACTGAGACTAGAACTATGGAAGAAAGAATGGCTGAGATGCAGGAGCACATCAACACCTTGATGAAGGCGATTGAAGAAAAAGATTCTCAAATTGAGCAACTAAAGAGCCAAATTGAGAACCAACATATCGCCGAATCAAGTCAAACCCAAAGAATTAAAAAGTTTTCTCAACCTCGACAACCGGTGACTGCGAAGGAACTCTTCTCCAAAACTTCCCGCAAAAAGGAAAAGGGAAACTTTGCAACTTCCTACTGCATCCATGCAGAAGAGGTTGACAGTTCTAAGAAGAGTGAACAAAGGACTTCCGTCTTCGATCGCATCAAGCCTCCAACTACTCGTCCTTCGTTCCTTCTCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCTCTCAATGTTCGAAGGTTCTCAAGCGTTTCGCTGTAGTTTCACGCGCTTCGCTGCAGTTCCTTCCTCTAAGTTTGAAGGTTCTCACGCGCTTCGCTGCAATTCCTTCCTCCAAGTTCGAAGGTTCTCACGCATTTCACTACAGTTCCTCCTCCCCAAGTTCGAAGGTTTTCACACACTTTGATGCAGTTCCTTCTCTCCAAGTTCGAAGGTTCTCATGCTACGCTAGAATGCGCTGCTGCGCTACTTGCTTCTTTAATTTAAGTTCGAAGGTTCCCACATTGCGCTGTTGTGTTGCTTTCTTCACCAAGTTCGAGGGTTTTCACGCTGCGTTGTTGTGCTGCTTTCTTCTCAAGGCGTGGCGGCGACACAAGTCCAAGGACACGTCCCAAAGTAAGGAACATGTCCATGTACTAATGCTGAAAGACGTGGCGGCGTCAAAAGTCCAAGGAGCACGTCATGTCCTTGTACTAATGCTGAAAGATGTGGCGGCGGCAAAAGTACAAGGAGCACGTCATGTCCTTGTACTAATGCCGAAAGATGTGGCGGCGGCAAAAGTCCAAGGAGCACGTCATGTCCTTGTACTAATGCCGAAAGATGTGGCGGCGGCAAAAGTACAAGGAGCACGTCATGTCCTTGTACTCATGCTGAAAGACGTGGCGGCGGCAAAAGTCCAAGGAGCACGTCATGTCCTTGTACTAATGCTCAAAGATGTGGTGGCGACAAAATTCCAAGGAGCACGTCATGTCCTTGTACTTATGCTGAAAGACATTGTATCTGCAAATTGA

Protein sequence

MTETRTMEERMAEMQEHINTLMKAIEEKDSQIEQLKSQIENQHIAESSQTQRIKKFSQPRQPVTAKELFSKTSRKKEKGNFATSYCIHAEEVDSSKKSEQRTSVFDRIKPPTTRPSFLLSKFEGSHALRCSSFSQCSKVLKRFAVVSRASLQFLPLSLKVLTRFAAIPSSKFEGSHAFHYSSSSPSSKVFTHFDAVPSLQVRRFSCYARMRCCATCFFNLSSKVPTLRCCVAFFTKFEGFHAALLCCFLLKAWRRHKSKDTSQSKEHVHVLMLKDVAASKVQGARHVLVLMLKDVAAAKVQGARHVLVLMPKDVAAAKVQGARHVLVLMPKDVAAAKVQGARHVLVLMLKDVAAAKVQGARHVLVLMLKDVVATKFQGARHVLVLMLKDIVSAN

Homology

The following BLAST results are available for this feature:

BLAST of Spg008099 vs.


Match Name	E-value	Identity	Description

BLAST of Spg008099 vs.


Match Name	E-value	Identity	Description

BLAST of Spg008099 vs.


Match Name	E-value	Identity	Description

BLAST of Spg008099 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 11..45

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg008099.1	Spg008099.1	mRNA