Spg008040 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg008040
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Melanoma inhibitory activity protein 3, putative
Location	scaffold4: 6922577 .. 6923538 (+)
RNA-Seq Expression	Spg008040
Synteny	Spg008040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCAAACTCTCAATTTCTTCTCTCTCTAATTTCTCTTTCGATGGACGAGAAGAACCACGCCGATGCCGGGGTTGATCCGCTGCCGGAAAATTCCTCCGTCGCCGCCGCCGCCGCAAGAGTCGAAGAACAGGAAGAAGAGAGTGGTTGGACGGATTATTTGGAGGATTATTATTTCTCGTCGGAAAATGAGAGAGAAAGCAGTTTTTTGTGTTCGAGTATTGGTAGCTGTTCTTGGGATATTTCAGAATCAGATGCAAATAATAATCGAAATTTCAATGTTTTAAGTGCTTTTTCTTCTGTTGGGGAAGTGATTTTGGATGTTCCAAAGAAGCTAACTTTCAAGAAAACAAGAACTCAGAAGATTTTTGAGGATGATTCCTTGGAAGATACGGCCACTTCTCCTATTCACAGTCCAAAAGTAAGCTCATAATTAAATTTTTTTTTCTATTTATCTTTATCAAATTGAATTTTTCTGTCTTAGGTGGCTGATTTGAAAGTGAGAACATCATCCCATGTAAATCCGAGGTTTGATGATCACATGACGATCAGTAGTTCCACGGTAATTGCTCTCTTCTTTCTTCTCTTCTCTTTCGATTCGTCGAGAAGTCAGAACAATTTACTTTTAACGGTTTTGGGCAGTTTTAGACCGTTGGATTTATAAAAAAGAAATTAAAAATTATGATTTGACTATGTATCAAATTTGGAATATAATTTTTTTTTTTTTAACCAAATTGATGGTTTTTGTAGGGCAGTGGAAGGCTATCGGGGAATTATTATTCAAACACAGAAAAAGATGTGTATTCTGCTGCAGAACTAAAGCAAAAAGGGCTGTGTTTGTTTCCTTTGTCCATGCTCCTTAATTAACATGGCTGAGTTGAGTCAAAAAAATGAGATGTAATTTGAGAATAATCATAACTTCTCTCGGTAACTCAACTCAAACTCAGTATATTATAATCCATTAT

mRNA sequence

ATGGACGAGAAGAACCACGCCGATGCCGGGGTTGATCCGCTGCCGGAAAATTCCTCCGTCGCCGCCGCCGCCGCAAGAGTCGAAGAACAGGAAGAAGAGAGTGGTTGGACGGATTATTTGGAGGATTATTATTTCTCGTCGGAAAATGAGAGAGAAAGCAGTTTTTTGTGTTCGAGTATTGGTAGCTGTTCTTGGGATATTTCAGAATCAGATGCAAATAATAATCGAAATTTCAATGTTTTAAGTGCTTTTTCTTCTGTTGGGGAAGTGATTTTGGATGTTCCAAAGAAGCTAACTTTCAAGAAAACAAGAACTCAGAAGATTTTTGAGGATGATTCCTTGGAAGATACGGCCACTTCTCCTATTCACAGTCCAAAAGTGGCTGATTTGAAAGTGAGAACATCATCCCATGTAAATCCGAGGTTTGATGATCACATGACGATCAGTAGTTCCACGGGCAGTGGAAGGCTATCGGGGAATTATTATTCAAACACAGAAAAAGATGTGTATTCTGCTGCAGAACTAAAGCAAAAAGGGCTGTGTTTGTTTCCTTTGTCCATGCTCCTTAATTAA

Coding sequence (CDS)

ATGGACGAGAAGAACCACGCCGATGCCGGGGTTGATCCGCTGCCGGAAAATTCCTCCGTCGCCGCCGCCGCCGCAAGAGTCGAAGAACAGGAAGAAGAGAGTGGTTGGACGGATTATTTGGAGGATTATTATTTCTCGTCGGAAAATGAGAGAGAAAGCAGTTTTTTGTGTTCGAGTATTGGTAGCTGTTCTTGGGATATTTCAGAATCAGATGCAAATAATAATCGAAATTTCAATGTTTTAAGTGCTTTTTCTTCTGTTGGGGAAGTGATTTTGGATGTTCCAAAGAAGCTAACTTTCAAGAAAACAAGAACTCAGAAGATTTTTGAGGATGATTCCTTGGAAGATACGGCCACTTCTCCTATTCACAGTCCAAAAGTGGCTGATTTGAAAGTGAGAACATCATCCCATGTAAATCCGAGGTTTGATGATCACATGACGATCAGTAGTTCCACGGGCAGTGGAAGGCTATCGGGGAATTATTATTCAAACACAGAAAAAGATGTGTATTCTGCTGCAGAACTAAAGCAAAAAGGGCTGTGTTTGTTTCCTTTGTCCATGCTCCTTAATTAA

Protein sequence

MDEKNHADAGVDPLPENSSVAAAAARVEEQEEESGWTDYLEDYYFSSENERESSFLCSSIGSCSWDISESDANNNRNFNVLSAFSSVGEVILDVPKKLTFKKTRTQKIFEDDSLEDTATSPIHSPKVADLKVRTSSHVNPRFDDHMTISSSTGSGRLSGNYYSNTEKDVYSAAELKQKGLCLFPLSMLLN

Homology

[Close]

BLAST of Spg008040 vs. NCBI nr
Match: XP_038888852.1 (vascular-related unknown protein 1-like [Benincasa hispida])

HSP 1 Score: 194.1 bits (492), Expect = 1.1e-45
Identity = 120/192 (62.50%), Postives = 143/192 (74.48%), Query Frame = 0


Query: 3   EKNHADA-GVDPLPENSSV--AAAAARVEEQEEESGWTDYLEDYYFSSENERESSFLCSS 62
           EKN+A A G D  PENSS   +AAAA   E++EESGWTDYLEDY+ S     ESS+LCSS
Sbjct: 2   EKNNATAEGSDSPPENSSTSSSAAAAAGAEEQEESGWTDYLEDYFSS-----ESSYLCSS 61

Query: 63  IGSCS-WDISESDANNNRNFNVLSAFSSVGEVILDVPKKLTFKKTRTQKIFEDDSLEDTA 122
           IGSCS WD + S+ N +     ++  + +G++I DVP KLTFKKTRTQKIFEDDSL+DTA
Sbjct: 62  IGSCSNWDHNISNPNYD-----INKTNHIGKMIFDVPNKLTFKKTRTQKIFEDDSLQDTA 121

Query: 123 TSPIHSPKVADLKVRTSSHVNPRFDDHMTISSSTGSGRLSGNYYSNTEKDVYSAAELKQK 182
           TSPIHSPKVADLKV+T SH NPRFD    I++ TGS R  G YYS+ E  VYS+   ++K
Sbjct: 122 TSPIHSPKVADLKVKT-SHENPRFD---VITNLTGSERQLGKYYSDKENGVYSS---EKK 176

Query: 183 GLCLFPLSMLLN 191
           GLCLFPLSMLLN
Sbjct: 182 GLCLFPLSMLLN 176

[Close]

BLAST of Spg008040 vs. NCBI nr
Match: XP_008455422.1 (PREDICTED: uncharacterized protein LOC103495585 [Cucumis melo])

HSP 1 Score: 187.6 bits (475), Expect = 1.0e-43
Identity = 123/197 (62.44%), Postives = 138/197 (70.05%), Query Frame = 0


Query: 2   DEKNHADAGVDPLPENSSVAAAAARVEEQEEESGWTDYLEDYYFSSENERESSFLCSSIG 61
           +  N      D  PENSS A A     E++EESGWTDYLEDY+ S   ERESSFLCSSIG
Sbjct: 7   NNNNATPQAPDSPPENSSAAGA-----EEQEESGWTDYLEDYFNSELVERESSFLCSSIG 66

Query: 62  SCS-WD--ISESDANNNRNFNVLSAFSSVGEVIL-DVPK--KLTFKKTRTQKIFE-DDSL 121
           SCS WD   + S  N + N+N+     +VG V   D PK   LTFKKTRTQKIFE DDSL
Sbjct: 67  SCSNWDDLNNISYPNYDINYNI-----NVGNVNYDDFPKSNNLTFKKTRTQKIFEDDDSL 126

Query: 122 EDTATSPIHSPKVADLKVRTSSHVNPRFDDHMTI-SSSTGSGRLSGNYYSNTEKDVYSAA 181
           +DTATSPIHSPKV DLKVRTS   NPRFDDH+TI ++STGSGR  G YYSN EK VYSA 
Sbjct: 127 QDTATSPIHSPKVVDLKVRTSQE-NPRFDDHITIFANSTGSGRQMGKYYSNKEKSVYSA- 186

Query: 182 ELKQKGLCLFPLSMLLN 191
             ++KGLCL P SMLLN
Sbjct: 187 --EKKGLCLLPFSMLLN 189

[Close]

BLAST of Spg008040 vs. NCBI nr
Match: XP_011658705.1 (vascular-related unknown protein 1 [Cucumis sativus] >KGN43534.1 hypothetical protein Csa_020147 [Cucumis sativus])

HSP 1 Score: 184.5 bits (467), Expect = 8.5e-43
Identity = 123/203 (60.59%), Postives = 140/203 (68.97%), Query Frame = 0


Query: 1   MDEKNHADAGV-DPLPENSSVAAAAARVEEQEEESGWTDYLEDYYFSSENERESSFLCSS 60
           M+  +HA     D LPENSS        +E++EESGWTDYLEDY+ S   ERESSFLCSS
Sbjct: 1   MENNDHATLQADDSLPENSSAVR-----DEEQEESGWTDYLEDYFNSEFVERESSFLCSS 60

Query: 61  IGSCS-WDISESDANN------NRNFNVLSAFSSVGEVIL-DVPK--KLTFKKTRTQKIF 120
           IGSCS WD    D NN      + N+N+     ++G V   D PK   LTFKKTRTQKIF
Sbjct: 61  IGSCSNWD----DRNNISYPSYDINYNI-----NIGNVNYDDFPKSNNLTFKKTRTQKIF 120

Query: 121 E-DDSLEDTATSPIHSPKVADLKVRTSSHVNPRFDDHMTI-SSSTGSGRLSGNYYSNTEK 180
           E DDSL+DTATSPIHSPKV DLKVRTS   N  FDDH+TI ++STGSGR  G YYSN EK
Sbjct: 121 EDDDSLQDTATSPIHSPKVVDLKVRTSQE-NQGFDDHITIFANSTGSGRQMGKYYSNKEK 180

Query: 181 DVYSAAELKQKGLCLFPLSMLLN 191
            VYSA   ++KGLCLFP SMLLN
Sbjct: 181 GVYSA---EKKGLCLFPFSMLLN 185

[Close]

BLAST of Spg008040 vs. NCBI nr
Match: XP_022136166.1 (uncharacterized protein LOC111007924 [Momordica charantia])

HSP 1 Score: 180.6 bits (457), Expect = 1.2e-41
Identity = 115/183 (62.84%), Postives = 128/183 (69.95%), Query Frame = 0


Query: 13  PLPENSSVAAAAARVEEQEEESGWTDYLEDYYFSSENERESSFLCSSIGSCSWDISESDA 72
           PL E S+ AA +     +EEESGWTDYLEDY+ SS+ ERE SFLCSSIGSCS D      
Sbjct: 9   PLEEPSAAAANSGGGGGEEEESGWTDYLEDYFSSSDIEREKSFLCSSIGSCSDD------ 68

Query: 73  NNNRNFNVLS-AFSSVGEVILDVPKKL-TFKK-TRTQKIFEDDSLEDTATSPIHSPKVAD 132
             N   NVLS    SVGEV LD PKKL  FKK TRTQKIF+DDSLEDTATSP+HSPKVAD
Sbjct: 69  -GNTTTNVLSPTLCSVGEVFLDSPKKLICFKKLTRTQKIFQDDSLEDTATSPVHSPKVAD 128

Query: 133 LKVRTSSHVNPRFDDHMTISSSTGSGRLSGNYYSNTEKDVYSAA--ELKQKGLCLFPLSM 191
           LKV+T  HVN +FDDH  I  S GS       YS  EK V +AA  +LKQ+GLCLFP SM
Sbjct: 129 LKVKT-KHVNLKFDDHAMIRGSMGSD------YSEGEKGVCTAAGGDLKQRGLCLFPFSM 177

[Close]

BLAST of Spg008040 vs. NCBI nr
Match: XP_022930798.1 (vascular-related unknown protein 1-like [Cucurbita moschata] >XP_022930799.1 vascular-related unknown protein 1-like [Cucurbita moschata])

HSP 1 Score: 153.3 bits (386), Expect = 2.1e-33
Identity = 90/133 (67.67%), Postives = 101/133 (75.94%), Query Frame = 0


Query: 1   MDEKNHADAGVDPLPENSSVAAAAARVEEQEEESGWTDYLEDYYFSSENERESSFL-CSS 60
           MD+KN A AGVDP PE SS AA  A   E+  ESGWT+YLEDY + SE ER+SSFL CSS
Sbjct: 1   MDKKNAAAAGVDPPPEKSSSAATGA---EEPSESGWTEYLEDYLW-SEIERKSSFLCCSS 60

Query: 61  IGSCSWDISESDANNNRNFNVLSAFSSVGEVILDVPKKLTFKKTRTQKIFEDDSLEDTAT 120
            GSCSWDISE+   N    N LS F SVGEVILD P KL+FKKT TQ+IF+DDSLEDTAT
Sbjct: 61  SGSCSWDISEA---NKEKINGLSPFCSVGEVILDAPNKLSFKKTTTQRIFDDDSLEDTAT 120

Query: 121 SPIHSPKVADLKV 133
           SP+ +PKVADL V
Sbjct: 121 SPVLTPKVADLNV 126

[Close]

BLAST of Spg008040 vs. ExPASy Swiss-Prot
Match: Q9LSZ3 (Vascular-related unknown protein 1 OS=Arabidopsis thaliana OX=3702 GN=VUP1 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.7e-09
Identity = 55/184 (29.89%), Postives = 88/184 (47.83%), Query Frame = 0


Query: 29  EQEEESGWTDYLEDY------YFSSENERESSFLCSSIGSCSWDISESDANNNRNFNVLS 88
           + +EESGWT YL+D+          EN+ +     S + + +  +S++  +         
Sbjct: 33  DHQEESGWTTYLDDFSNQYRTTHHEENDHQDKSSYSLLATSTSLVSDAATH--------- 92

Query: 89  AFSSVGEVILDVPKKLTFKKTRTQKIFEDDSLEDTATSPIHSPKVADLK------VRTSS 148
           AFS     + + P KL F + RT+KI EDDSLEDTA+SP++SPKV+  +       +   
Sbjct: 93  AFSGKSFPV-NFPAKLKFGRGRTKKICEDDSLEDTASSPVNSPKVSHFEHIQTPPRKIED 152

Query: 149 HVNPRF--------DDHMTISSSTGSGR--LSGNYYSNTEKDVYSAAELKQKGLCLFPLS 191
           +V+  F         DH       G  +  L  N       +  +  +L+ +GLC+ P+S
Sbjct: 153 YVSSSFVMGNIRGMGDHQIQIQEGGEQKVTLMRNLIDGNNNNNNNNMDLRSRGLCVVPIS 206

[Close]

BLAST of Spg008040 vs. ExPASy TrEMBL
Match: A0A1S3C0F7 (uncharacterized protein LOC103495585 OS=Cucumis melo OX=3656 GN=LOC103495585 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 4.9e-44
Identity = 123/197 (62.44%), Postives = 138/197 (70.05%), Query Frame = 0


Query: 2   DEKNHADAGVDPLPENSSVAAAAARVEEQEEESGWTDYLEDYYFSSENERESSFLCSSIG 61
           +  N      D  PENSS A A     E++EESGWTDYLEDY+ S   ERESSFLCSSIG
Sbjct: 7   NNNNATPQAPDSPPENSSAAGA-----EEQEESGWTDYLEDYFNSELVERESSFLCSSIG 66

Query: 62  SCS-WD--ISESDANNNRNFNVLSAFSSVGEVIL-DVPK--KLTFKKTRTQKIFE-DDSL 121
           SCS WD   + S  N + N+N+     +VG V   D PK   LTFKKTRTQKIFE DDSL
Sbjct: 67  SCSNWDDLNNISYPNYDINYNI-----NVGNVNYDDFPKSNNLTFKKTRTQKIFEDDDSL 126

Query: 122 EDTATSPIHSPKVADLKVRTSSHVNPRFDDHMTI-SSSTGSGRLSGNYYSNTEKDVYSAA 181
           +DTATSPIHSPKV DLKVRTS   NPRFDDH+TI ++STGSGR  G YYSN EK VYSA 
Sbjct: 127 QDTATSPIHSPKVVDLKVRTSQE-NPRFDDHITIFANSTGSGRQMGKYYSNKEKSVYSA- 186

Query: 182 ELKQKGLCLFPLSMLLN 191
             ++KGLCL P SMLLN
Sbjct: 187 --EKKGLCLLPFSMLLN 189

[Close]

BLAST of Spg008040 vs. ExPASy TrEMBL
Match: A0A0A0K3L1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G044250 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 4.1e-43
Identity = 123/203 (60.59%), Postives = 140/203 (68.97%), Query Frame = 0


Query: 1   MDEKNHADAGV-DPLPENSSVAAAAARVEEQEEESGWTDYLEDYYFSSENERESSFLCSS 60
           M+  +HA     D LPENSS        +E++EESGWTDYLEDY+ S   ERESSFLCSS
Sbjct: 1   MENNDHATLQADDSLPENSSAVR-----DEEQEESGWTDYLEDYFNSEFVERESSFLCSS 60

Query: 61  IGSCS-WDISESDANN------NRNFNVLSAFSSVGEVIL-DVPK--KLTFKKTRTQKIF 120
           IGSCS WD    D NN      + N+N+     ++G V   D PK   LTFKKTRTQKIF
Sbjct: 61  IGSCSNWD----DRNNISYPSYDINYNI-----NIGNVNYDDFPKSNNLTFKKTRTQKIF 120

Query: 121 E-DDSLEDTATSPIHSPKVADLKVRTSSHVNPRFDDHMTI-SSSTGSGRLSGNYYSNTEK 180
           E DDSL+DTATSPIHSPKV DLKVRTS   N  FDDH+TI ++STGSGR  G YYSN EK
Sbjct: 121 EDDDSLQDTATSPIHSPKVVDLKVRTSQE-NQGFDDHITIFANSTGSGRQMGKYYSNKEK 180

Query: 181 DVYSAAELKQKGLCLFPLSMLLN 191
            VYSA   ++KGLCLFP SMLLN
Sbjct: 181 GVYSA---EKKGLCLFPFSMLLN 185

[Close]

BLAST of Spg008040 vs. ExPASy TrEMBL
Match: A0A6J1C2S1 (uncharacterized protein LOC111007924 OS=Momordica charantia OX=3673 GN=LOC111007924 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 6.0e-42
Identity = 115/183 (62.84%), Postives = 128/183 (69.95%), Query Frame = 0


Query: 13  PLPENSSVAAAAARVEEQEEESGWTDYLEDYYFSSENERESSFLCSSIGSCSWDISESDA 72
           PL E S+ AA +     +EEESGWTDYLEDY+ SS+ ERE SFLCSSIGSCS D      
Sbjct: 9   PLEEPSAAAANSGGGGGEEEESGWTDYLEDYFSSSDIEREKSFLCSSIGSCSDD------ 68

Query: 73  NNNRNFNVLS-AFSSVGEVILDVPKKL-TFKK-TRTQKIFEDDSLEDTATSPIHSPKVAD 132
             N   NVLS    SVGEV LD PKKL  FKK TRTQKIF+DDSLEDTATSP+HSPKVAD
Sbjct: 69  -GNTTTNVLSPTLCSVGEVFLDSPKKLICFKKLTRTQKIFQDDSLEDTATSPVHSPKVAD 128

Query: 133 LKVRTSSHVNPRFDDHMTISSSTGSGRLSGNYYSNTEKDVYSAA--ELKQKGLCLFPLSM 191
           LKV+T  HVN +FDDH  I  S GS       YS  EK V +AA  +LKQ+GLCLFP SM
Sbjct: 129 LKVKT-KHVNLKFDDHAMIRGSMGSD------YSEGEKGVCTAAGGDLKQRGLCLFPFSM 177

[Close]

BLAST of Spg008040 vs. ExPASy TrEMBL
Match: A0A6J1ESI7 (Uncharacterized protein OS=Cucurbita moschata OX=3662 GN=LOC111437171 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 1.0e-33
Identity = 90/133 (67.67%), Postives = 101/133 (75.94%), Query Frame = 0


Query: 1   MDEKNHADAGVDPLPENSSVAAAAARVEEQEEESGWTDYLEDYYFSSENERESSFL-CSS 60
           MD+KN A AGVDP PE SS AA  A   E+  ESGWT+YLEDY + SE ER+SSFL CSS
Sbjct: 1   MDKKNAAAAGVDPPPEKSSSAATGA---EEPSESGWTEYLEDYLW-SEIERKSSFLCCSS 60

Query: 61  IGSCSWDISESDANNNRNFNVLSAFSSVGEVILDVPKKLTFKKTRTQKIFEDDSLEDTAT 120
            GSCSWDISE+   N    N LS F SVGEVILD P KL+FKKT TQ+IF+DDSLEDTAT
Sbjct: 61  SGSCSWDISEA---NKEKINGLSPFCSVGEVILDAPNKLSFKKTTTQRIFDDDSLEDTAT 120

Query: 121 SPIHSPKVADLKV 133
           SP+ +PKVADL V
Sbjct: 121 SPVLTPKVADLNV 126

[Close]

BLAST of Spg008040 vs. ExPASy TrEMBL
Match: A0A6J1JN61 (Uncharacterized protein OS=Cucurbita maxima OX=3661 GN=LOC111486202 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 2.8e-31
Identity = 87/133 (65.41%), Postives = 98/133 (73.68%), Query Frame = 0


Query: 1   MDEKNHADAGVDPLPENSSVAAAAARVEEQEEESGWTDYLEDYYFSSENERESSFL-CSS 60
           MD+KN   AGVDP PE SS AA  A   E+ EESGWT+YLEDY + SE ER+SSFL CSS
Sbjct: 1   MDKKN---AGVDPPPEKSSSAATGA---EEAEESGWTEYLEDYLW-SEIERKSSFLCCSS 60

Query: 61  IGSCSWDISESDANNNRNFNVLSAFSSVGEVILDVPKKLTFKKTRTQKIFEDDSLEDTAT 120
            GSCSWDISE+   N    N L+ F SVGEVILD P KL+ KKT TQ IF+DDSLEDTAT
Sbjct: 61  SGSCSWDISEA---NKEKINALTPFCSVGEVILDAPNKLSLKKTTTQTIFDDDSLEDTAT 120

Query: 121 SPIHSPKVADLKV 133
           SP+ +PKVAD  V
Sbjct: 121 SPVLTPKVADFNV 123

[Close]

BLAST of Spg008040 vs. TAIR 10
Match: AT3G21710.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 64.3 bits (155), Expect = 1.2e-10
Identity = 55/184 (29.89%), Postives = 88/184 (47.83%), Query Frame = 0


Query: 29  EQEEESGWTDYLEDY------YFSSENERESSFLCSSIGSCSWDISESDANNNRNFNVLS 88
           + +EESGWT YL+D+          EN+ +     S + + +  +S++  +         
Sbjct: 33  DHQEESGWTTYLDDFSNQYRTTHHEENDHQDKSSYSLLATSTSLVSDAATH--------- 92

Query: 89  AFSSVGEVILDVPKKLTFKKTRTQKIFEDDSLEDTATSPIHSPKVADLK------VRTSS 148
           AFS     + + P KL F + RT+KI EDDSLEDTA+SP++SPKV+  +       +   
Sbjct: 93  AFSGKSFPV-NFPAKLKFGRGRTKKICEDDSLEDTASSPVNSPKVSHFEHIQTPPRKIED 152

Query: 149 HVNPRF--------DDHMTISSSTGSGR--LSGNYYSNTEKDVYSAAELKQKGLCLFPLS 191
           +V+  F         DH       G  +  L  N       +  +  +L+ +GLC+ P+S
Sbjct: 153 YVSSSFVMGNIRGMGDHQIQIQEGGEQKVTLMRNLIDGNNNNNNNNMDLRSRGLCVVPIS 206

[Close]

BLAST of Spg008040 vs. TAIR 10
Match: AT3G21710.1 (unknown protein; Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 56.6 bits (135), Expect = 2.5e-08
Identity = 39/106 (36.79%), Postives = 60/106 (56.60%), Query Frame = 0


Query: 29  EQEEESGWTDYLEDY------YFSSENERESSFLCSSIGSCSWDISESDANNNRNFNVLS 88
           + +EESGWT YL+D+          EN+ +     S + + +  +S++  +         
Sbjct: 33  DHQEESGWTTYLDDFSNQYRTTHHEENDHQDKSSYSLLATSTSLVSDAATH--------- 92

Query: 89  AFSSVGEVILDVPKKLTFKKTRTQKIFEDDSLEDTATSPIHSPKVA 129
           AFS     + + P KL F + RT+KI EDDSLEDTA+SP++SPKV+
Sbjct: 93  AFSGKSFPV-NFPAKLKFGRGRTKKICEDDSLEDTASSPVNSPKVS 128

[Close]

BLAST of Spg008040 vs. TAIR 10
Match: AT5G54790.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G50930.1); Has 53 Blast hits to 53 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 44.3 bits (103), Expect = 1.3e-04
Identity = 50/169 (29.59%), Postives = 73/169 (43.20%), Query Frame = 0


Query: 28  EEQEEESGWTDYLEDYYFSSENERESSFLCSSIGSCSWDISESDANNNRNFNVLSAFSSV 87
           ++  EES WT Y ED++       E+S     +G    D S S  ++  +F       +V
Sbjct: 22  DQNPEESSWTMYFEDFF-------EASSSIVDVG----DFSSSSVSDAASFVATKKTLNV 81

Query: 88  GEVILDVPKKLTFKKTRTQKI--FEDDSLEDTATSPIHSPKV---ADLKVRTSSHVNPRF 147
            +        L  K+TR ++I       LEDTA+SP  SP V    +L+   + H     
Sbjct: 82  SK---QEGSNLDIKRTRNREIPFGRHHDLEDTASSPSGSPNVYSMMNLQDNNTRHGGGIV 141

Query: 148 -DDHMTISSSTGSGRLSGNYYSNTEKDVYSAAELKQKGLCLFPLSMLLN 191
            DD   +S+    G L                +LK+KGLCL PLSM+ N
Sbjct: 142 GDDEKRVSAVPNQGGL--------------PIDLKKKGLCLVPLSMVTN 162

The following BLAST results are available for this feature:

BLAST of Spg008040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888852.1	1.1e-45	62.50	vascular-related unknown protein 1-like [Benincasa hispida]	[more]
XP_008455422.1	1.0e-43	62.44	PREDICTED: uncharacterized protein LOC103495585 [Cucumis melo]	[more]
XP_011658705.1	8.5e-43	60.59	vascular-related unknown protein 1 [Cucumis sativus] >KGN43534.1 hypothetical pr...	[more]
XP_022136166.1	1.2e-41	62.84	uncharacterized protein LOC111007924 [Momordica charantia]	[more]
XP_022930798.1	2.1e-33	67.67	vascular-related unknown protein 1-like [Cucurbita moschata] >XP_022930799.1 vas...	[more]

BLAST of Spg008040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSZ3	1.7e-09	29.89	Vascular-related unknown protein 1 OS=Arabidopsis thaliana OX=3702 GN=VUP1 PE=2 ...	[more]

BLAST of Spg008040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C0F7	4.9e-44	62.44	uncharacterized protein LOC103495585 OS=Cucumis melo OX=3656 GN=LOC103495585 PE=...	[more]
A0A0A0K3L1	4.1e-43	60.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G044250 PE=4 SV=1	[more]
A0A6J1C2S1	6.0e-42	62.84	uncharacterized protein LOC111007924 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A6J1ESI7	1.0e-33	67.67	Uncharacterized protein OS=Cucurbita moschata OX=3662 GN=LOC111437171 PE=4 SV=1	[more]
A0A6J1JN61	2.8e-31	65.41	Uncharacterized protein OS=Cucurbita maxima OX=3661 GN=LOC111486202 PE=4 SV=1	[more]

BLAST of Spg008040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G21710.2	1.2e-10	29.89	unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ...	[more]
AT3G21710.1	2.5e-08	36.79	unknown protein; Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bac...	[more]
AT5G54790.1	1.3e-04	29.59	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	PANTHER	PTHR33974:SF2	VASCULAR-RELATED UNKNOWN PROTEIN 1-RELATED	coord: 22..190
IPR039280	VASCULAR-RELATED UNKNOWN PROTEIN	PANTHER	PTHR33974	VASCULAR-RELATED UNKNOWN PROTEIN 1-RELATED	coord: 22..190

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg008040.1	Spg008040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010089	xylem development