Spg007868 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg007868
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	protein WHAT'S THIS FACTOR 1 homolog
Location	scaffold4: 9584560 .. 9587260 (+)
RNA-Seq Expression	Spg007868
Synteny	Spg007868

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCGTACCTTTCATTCTTCCCCACAAAGCTTATTTCTCTGAGAATCCCTCTTTTTCTGTCAAATCGGAATTTTGGGGTAAAAACTTGTATTTGCGAAACGGAAATGATAGCTCTAGTGGTAATTTAAGAAAATCCCATGTTCTGTTTCAACCGATTAGAGCTGTTGTGAAACGGAGGAAAGAGCTTCCGTTTGATAATGTTATACAGAGGGATAAGAAGCTGAAGTTGGTTATGAGGATTAGGAAGATTCTTGTTCAACAACCTGATAGAATTATGTCACTCAAGGAATTGGGTAAATTCAGGAGAGATTTGGGTCTAGAGAAAAAGAGGAGGCTCATTGCTTTGTTGAAGAAGTTTCCTGCAGTGTTTGAGGTTGTGGAAGAAGGGGCATTTTCGTTGAGATTCAAATTAACAGCTGAGGCCGAAAGGTTGTATTTGGAGGAGTTGAAGATTAGGAATGAGATGGAAGGTTTGTTAGTTATTAAGTTGAGGAAGCTATTGATGATGTCGGCCGATAAACGAATATTGTTGGAGAAGATTGCACATTTGAGGACCGATTTTGGTCTTCCTTTAGAGTTTCGTGACACGATCTGCCATCGGTATCCCCAGTACTTTAGAGTTGTGGCGACCGAGCGTGGTCCTGCCCTCGAATTGACTCACTGGGATCCTGAGCTTGCTGTTTCTGCAGCAGAATTAGCAGAAGAGGAAAACCGAGCTAGAGAATTGGAAGAGAAGAATTTGATTATCGACCGACCACTGAAGTTTAATCGAGTGAAGCTACCTAAGGGGCTTAACCTTTCAAAGAGTGAGATGAGGAAAATTAGTCAGTTTAGGGACATTCCTTATATCTCTCCCTATTCTGATTTCTCAGGGTTAAAGGCAGGTACACCCGAGAAAGAGAAACATGCTTGTGGGGTTGTTCATGAGATTTTAAGCCTTACACTTGAGAAGAGAACTCTAGTGGATCATCTGACTCATTTCCGGGAGGAGTTTAGGTTCTCACAGCAGTTGAGAGGGATGCTAATAAGGCATCCCGATATGTTTTATGTCTCGTTGAAAGGGGATAGAGATTCGGTTTTCCTTAGAGAAGCATATCGTGATTCTCACTTGATCGACAAAGATCGGTTATTAATCATTAAGGAGAAACTTCGAGCTCTTGTTGTTGTTCCTCGATTCCGAGGCAGAGGAGCTCCCAAGAGTGACTCGGATGGGGGAGAAACCAATCAGCCAGACAATATGAGTGGTGAAGAATGGTCTGATGTCGATAACCTCTTGGGTGACGATGATGAATTTGACGACGACGACAACGGAGCTTTTGAGGATGACTGGAGTGATGAAGATGATACCCCACCAAGTTTCGATGGAGATCAAGATGGAGAATCCATAAATATTGGAGGAAGGAAGCAAAGACAGGTCCAGAACTTACAAAAGGCTAGTCAGAGTCTTCTTTCTCCTGTATTACCCGATGGACGGCCACGAGAAAGATGGTGAGAGGCATACACTTGTCTATTTTGTACTCTGTAGTATACTCTTAGACATCTTTAGGGACTTGGATTCACGAATGTGATCTGCTGTGTAGTAATGATGGTTTCTTTACCAAAACAGCGATGAAAGCTTTTCTCAAATCATGGTTAAGTCAAAGTATATATCCTGCATTCTGTTTACGTTTTGTATTTCTCTTCGGCTTATGAATATTAACACAGGCATTTGGATTAAGGTTTGATTAGGCAGCTTTAGGTACTAGTTTGGATGCCATCAGAGGTTGAATTGAACCATTGCTTTTGCATTGTTAACTATTAAAATAATTGATAGACTTTAGGTTAAATTATAAATTTAGTTGTTGAGGGGCCGTTTGATAACCATTTTGTTTTCAGTTTTTGGTTTTTGGTTTTCTGTTTTTAAAAAACGGGTCTGTTTGGTAATCAATTGAGTTTTTTGTTTTTAAGTTTTTGAAAACGTTTTTAGAATTCTTAAGAAATTTCAAAAACGAAAAAAAAAAACGTTTTCAAAAACAGGTTTTCGTTTTCAAAAATGAAAACACGAGTGGAATGTAGAGGGAAGCCCTAACCTACGTTGAAGAAAACTGTCTTCCAAAAGTCTATGAGACTATGAAGCTTCTCCAGTGAGCACAAAGAACAGAAGCGACGGTTTCTTCTCACTCGATCATCATCAGAGCCTCATCGCGACGACGTTGTTCTTCTATTCCTCGATTTTCAGGTGAGAATATACTCTCATTTCTTTTACAGGGTTGCCTTTTCTTTCCCTCCCCCCCCCCCCCCCCCCCCCCCTCCCTTTGTTCTTCATTCAATTCTGTTTCGATTTTTGCTGTTTCTCTCTTACATTGACTGTTTTGAGCCCTTGAGGCACTTTTTTCAACTTTTAAGTTTAGTTTGATGGTTGGAGATGAATTCTCTGCCTGGTTGTGCTTTTTGGCTTCTGAGTTTCTTCTTTTGTTGAATGTGTTGTTTGCTTCCCTGTGTTAGTTTGTCTTATTTTGTATAATTGGGAGATTGTGTAATGTAGATTGGAGGTTTTGGATTGTAGCGGCTGAGAGTGCTTTTTGTTTGCTCTGAATGTTGTGTTTCAATTTTTTTTTTTTGTCCTCATATGTTTCTGCTCTTTTACTGGAAAGAAGGCTACATTTCAAGAACAAGGGGATTCTGTGTGGATTTCTCCTTCTGGATGTGAAAATCTTTAG

mRNA sequence

ATGTCCGTACCTTTCATTCTTCCCCACAAAGCTTATTTCTCTGAGAATCCCTCTTTTTCTGTCAAATCGGAATTTTGGGGTAAAAACTTGTATTTGCGAAACGGAAATGATAGCTCTAGTGGTAATTTAAGAAAATCCCATGTTCTGTTTCAACCGATTAGAGCTGTTGTGAAACGGAGGAAAGAGCTTCCGTTTGATAATGTTATACAGAGGGATAAGAAGCTGAAGTTGGTTATGAGGATTAGGAAGATTCTTGTTCAACAACCTGATAGAATTATGTCACTCAAGGAATTGGGTAAATTCAGGAGAGATTTGGGTCTAGAGAAAAAGAGGAGGCTCATTGCTTTGTTGAAGAAGTTTCCTGCAGTGTTTGAGGTTGTGGAAGAAGGGGCATTTTCGTTGAGATTCAAATTAACAGCTGAGGCCGAAAGGTTGTATTTGGAGGAGTTGAAGATTAGGAATGAGATGGAAGGTTTGTTAGTTATTAAGTTGAGGAAGCTATTGATGATGTCGGCCGATAAACGAATATTGTTGGAGAAGATTGCACATTTGAGGACCGATTTTGGTCTTCCTTTAGAGTTTCGTGACACGATCTGCCATCGGTATCCCCAGTACTTTAGAGTTGTGGCGACCGAGCGTGGTCCTGCCCTCGAATTGACTCACTGGGATCCTGAGCTTGCTGTTTCTGCAGCAGAATTAGCAGAAGAGGAAAACCGAGCTAGAGAATTGGAAGAGAAGAATTTGATTATCGACCGACCACTGAAGTTTAATCGAGTGAAGCTACCTAAGGGGCTTAACCTTTCAAAGAGTGAGATGAGGAAAATTAGTCAGTTTAGGGACATTCCTTATATCTCTCCCTATTCTGATTTCTCAGGGTTAAAGGCAGGTACACCCGAGAAAGAGAAACATGCTTGTGGGGTTGTTCATGAGATTTTAAGCCTTACACTTGAGAAGAGAACTCTAGTGGATCATCTGACTCATTTCCGGGAGGAGTTTAGGTTCTCACAGCAGTTGAGAGGGATGCTAATAAGGCATCCCGATATGTTTTATGTCTCGTTGAAAGGGGATAGAGATTCGGTTTTCCTTAGAGAAGCATATCGTGATTCTCACTTGATCGACAAAGATCGGTTATTAATCATTAAGGAGAAACTTCGAGCTCTTGTTGTTGTTCCTCGATTCCGAGGCAGAGGAGCTCCCAAGAGTGACTCGGATGGGGGAGAAACCAATCAGCCAGACAATATGAGTGGTGAAGAATGGTCTGATGTCGATAACCTCTTGGGTGACGATGATGAATTTGACGACGACGACAACGGAGCTTTTGAGGATGACTGGAGTGATGAAGATGATACCCCACCAAGTTTCGATGGAGATCAAGATGGAGAATCCATAAATATTGGAGGAAGGAAGCAAAGACAGGTCCAGAACTTACAAAAGGCTAGTCAGAGTCTTCTTTCTCCTGTATTACCCGATGGACGGCCACGAGAAAGATGTGAGCACAAAGAACAGAAGCGACGGTTTCTTCTCACTCGATCATCATCAGAGCCTCATCGCGACGACGTTGTTCTTCTATTCCTCGATTTTCAGAAGGCTACATTTCAAGAACAAGGGGATTCTGTGTGGATTTCTCCTTCTGGATGTGAAAATCTTTAG

Coding sequence (CDS)

ATGTCCGTACCTTTCATTCTTCCCCACAAAGCTTATTTCTCTGAGAATCCCTCTTTTTCTGTCAAATCGGAATTTTGGGGTAAAAACTTGTATTTGCGAAACGGAAATGATAGCTCTAGTGGTAATTTAAGAAAATCCCATGTTCTGTTTCAACCGATTAGAGCTGTTGTGAAACGGAGGAAAGAGCTTCCGTTTGATAATGTTATACAGAGGGATAAGAAGCTGAAGTTGGTTATGAGGATTAGGAAGATTCTTGTTCAACAACCTGATAGAATTATGTCACTCAAGGAATTGGGTAAATTCAGGAGAGATTTGGGTCTAGAGAAAAAGAGGAGGCTCATTGCTTTGTTGAAGAAGTTTCCTGCAGTGTTTGAGGTTGTGGAAGAAGGGGCATTTTCGTTGAGATTCAAATTAACAGCTGAGGCCGAAAGGTTGTATTTGGAGGAGTTGAAGATTAGGAATGAGATGGAAGGTTTGTTAGTTATTAAGTTGAGGAAGCTATTGATGATGTCGGCCGATAAACGAATATTGTTGGAGAAGATTGCACATTTGAGGACCGATTTTGGTCTTCCTTTAGAGTTTCGTGACACGATCTGCCATCGGTATCCCCAGTACTTTAGAGTTGTGGCGACCGAGCGTGGTCCTGCCCTCGAATTGACTCACTGGGATCCTGAGCTTGCTGTTTCTGCAGCAGAATTAGCAGAAGAGGAAAACCGAGCTAGAGAATTGGAAGAGAAGAATTTGATTATCGACCGACCACTGAAGTTTAATCGAGTGAAGCTACCTAAGGGGCTTAACCTTTCAAAGAGTGAGATGAGGAAAATTAGTCAGTTTAGGGACATTCCTTATATCTCTCCCTATTCTGATTTCTCAGGGTTAAAGGCAGGTACACCCGAGAAAGAGAAACATGCTTGTGGGGTTGTTCATGAGATTTTAAGCCTTACACTTGAGAAGAGAACTCTAGTGGATCATCTGACTCATTTCCGGGAGGAGTTTAGGTTCTCACAGCAGTTGAGAGGGATGCTAATAAGGCATCCCGATATGTTTTATGTCTCGTTGAAAGGGGATAGAGATTCGGTTTTCCTTAGAGAAGCATATCGTGATTCTCACTTGATCGACAAAGATCGGTTATTAATCATTAAGGAGAAACTTCGAGCTCTTGTTGTTGTTCCTCGATTCCGAGGCAGAGGAGCTCCCAAGAGTGACTCGGATGGGGGAGAAACCAATCAGCCAGACAATATGAGTGGTGAAGAATGGTCTGATGTCGATAACCTCTTGGGTGACGATGATGAATTTGACGACGACGACAACGGAGCTTTTGAGGATGACTGGAGTGATGAAGATGATACCCCACCAAGTTTCGATGGAGATCAAGATGGAGAATCCATAAATATTGGAGGAAGGAAGCAAAGACAGGTCCAGAACTTACAAAAGGCTAGTCAGAGTCTTCTTTCTCCTGTATTACCCGATGGACGGCCACGAGAAAGATGTGAGCACAAAGAACAGAAGCGACGGTTTCTTCTCACTCGATCATCATCAGAGCCTCATCGCGACGACGTTGTTCTTCTATTCCTCGATTTTCAGAAGGCTACATTTCAAGAACAAGGGGATTCTGTGTGGATTTCTCCTTCTGGATGTGAAAATCTTTAG

Protein sequence

MSVPFILPHKAYFSENPSFSVKSEFWGKNLYLRNGNDSSSGNLRKSHVLFQPIRAVVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRIMSLKELGKFRRDLGLEKKRRLIALLKKFPAVFEVVEEGAFSLRFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKRILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGLKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKGDRDSVFLREAYRDSHLIDKDRLLIIKEKLRALVVVPRFRGRGAPKSDSDGGETNQPDNMSGEEWSDVDNLLGDDDEFDDDDNGAFEDDWSDEDDTPPSFDGDQDGESINIGGRKQRQVQNLQKASQSLLSPVLPDGRPRERCEHKEQKRRFLLTRSSSEPHRDDVVLLFLDFQKATFQEQGDSVWISPSGCENL

Homology

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BLAST of Spg007868 vs. NCBI nr
Match: XP_038900012.1 (protein WHAT'S THIS FACTOR 1 homolog, chloroplastic [Benincasa hispida])

HSP 1 Score: 850.5 bits (2196), Expect = 8.0e-243
Identity = 450/497 (90.54%), Postives = 465/497 (93.56%), Query Frame = 0


Query: 1   MSVPFILPHKAYFSENPSFSVKSEFWGKNLYLRNGNDSSSGNLRKSHVLFQPIRAVVKRR 60
           +SVPFIL HK+Y       SVKSEFWGKNL  RN NDS    LRK HV FQPIRAVVKRR
Sbjct: 16  ISVPFILGHKSY------CSVKSEFWGKNLEFRNRNDS----LRKPHVPFQPIRAVVKRR 75

Query: 61  KELPFDNVIQRDKKLKLVMRIRKILVQQPDRIMSLKELGKFRRDLGLEKKRRLIALLKKF 120
           KEL FDNVIQRDKKLKLVMRIRKILVQQPDR+MSLKELGKFRRDLGLEKKRRLIALLKKF
Sbjct: 76  KELKFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLGLEKKRRLIALLKKF 135

Query: 121 PAVFEVVEEGAFSLRFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKRILLEK 180
           PAVFEVVEEGAFSL+FKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKRILLEK
Sbjct: 136 PAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKRILLEK 195

Query: 181 IAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAEEENRA 240
           IAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAEEENRA
Sbjct: 196 IAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAEEENRA 255

Query: 241 RELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGLKAGTPEK 300
           RELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSG+KAGTP+K
Sbjct: 256 RELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGIKAGTPQK 315

Query: 301 EKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKGDRDSV 360
           EKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKGDRDSV
Sbjct: 316 EKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKGDRDSV 375

Query: 361 FLREAYRDSHLIDKDRLLIIKEKLRALVVVPRFRGRGAPKSDSDGGETNQPDNMSGEEWS 420
           FLREAYRDS LIDKDRLLIIKEKLR+LV VPRF+GRGAPKSD DG +T+QPD+MSGEEWS
Sbjct: 376 FLREAYRDSQLIDKDRLLIIKEKLRSLVAVPRFQGRGAPKSDMDGEDTDQPDDMSGEEWS 435

Query: 421 DVDNLL-GDDDEFDDDDNGAFEDDWSDEDDTPPSFDGDQDGESINIGGRKQRQVQNLQKA 480
           DVDN+   DDDEFDD D+GAFEDDW DEDDTPPSFDGD+DGESIN G RKQ+QV NLQK 
Sbjct: 436 DVDNVWDDDDDEFDDGDDGAFEDDWIDEDDTPPSFDGDRDGESINSGSRKQKQVNNLQKV 495

Query: 481 SQSLLSPVLPDGRPRER 497
            QSLLSPVLPDGRPRER
Sbjct: 496 GQSLLSPVLPDGRPRER 502

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BLAST of Spg007868 vs. NCBI nr
Match: XP_008461525.1 (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo])

HSP 1 Score: 848.6 bits (2191), Expect = 3.0e-242
Identity = 449/502 (89.44%), Postives = 466/502 (92.83%), Query Frame = 0


Query: 1   MSVPFILPHKAYFSENPSFSVKSEFWGKNLYLRNGNDSSSGNLRKSHVLFQPIRAVVKRR 60
           +SVPFIL HK+Y      +SVKS+FWGKNL LRN ND    NLRK+H  FQPIRAVVKRR
Sbjct: 16  ISVPFILGHKSY------YSVKSQFWGKNLDLRNRND----NLRKAHDPFQPIRAVVKRR 75

Query: 61  KELPFDNVIQRDKKLKLVMRIRKILVQQPDRIMSLKELGKFRRDLGLEKKRRLIALLKKF 120
           KELPFDNVIQRDKKLKLVMRIRKILVQQPDR+MSLKELGKFRRDLGLEKKRRLIALLKKF
Sbjct: 76  KELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLGLEKKRRLIALLKKF 135

Query: 121 PAVFEVVEEGAFSLRFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKRILLEK 180
           PAVFEVVEEGAFSL+FKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKRILLEK
Sbjct: 136 PAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKRILLEK 195

Query: 181 IAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAEEENRA 240
           IAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAEEENRA
Sbjct: 196 IAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAEEENRA 255

Query: 241 RELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGLKAGTPEK 300
           RELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSG+KAGTP+K
Sbjct: 256 RELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGIKAGTPQK 315

Query: 301 EKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKGDRDSV 360
           EKHACGVVHEIL+LTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKGDRDSV
Sbjct: 316 EKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKGDRDSV 375

Query: 361 FLREAYRDSHLIDKDRLLIIKEKLRALVVVPRFRGRGAPKSDSDGGETNQPDNMSGEEWS 420
           FLREAYRDS LIDKDRLLIIKEKLRALV VPRFR RGA   D+ GG+TNQP +MSGEEWS
Sbjct: 376 FLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTKGGDTNQPSDMSGEEWS 435

Query: 421 DVDNLLG------DDDEFDDDDNGAFEDDWSDEDDTPPSFDGDQDGESINIGGRKQRQVQ 480
           DVDNLL       DDDEFDDD+N AFEDDWSDEDDTPPSF+GDQDGESINIG RKQ+QV 
Sbjct: 436 DVDNLLDDDDDEFDDDEFDDDNNEAFEDDWSDEDDTPPSFNGDQDGESINIGSRKQKQVN 495

Query: 481 NLQKASQSLLSPVLPDGRPRER 497
           +LQK  QS LSPVLPDGRPRER
Sbjct: 496 DLQKVGQSRLSPVLPDGRPRER 507

[Close]

BLAST of Spg007868 vs. NCBI nr
Match: KAA0051010.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa] >TYK04397.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa])

HSP 1 Score: 847.4 bits (2188), Expect = 6.8e-242
Identity = 449/505 (88.91%), Postives = 466/505 (92.28%), Query Frame = 0


Query: 1   MSVPFILPHKAYFSENPSFSVKSEFWGKNLYLRNGNDSSSGNLRKSHVLFQPIRAVVKRR 60
           +SVPFIL HK+Y      +SVKS+FWGKNL LRN ND    NLRK+H  FQPIRAVVKRR
Sbjct: 16  ISVPFILGHKSY------YSVKSQFWGKNLDLRNRND----NLRKAHDPFQPIRAVVKRR 75

Query: 61  KELPFDNVIQRDKKLKLVMRIRKILVQQPDRIMSLKELGKFRRDLGLEKKRRLIALLKKF 120
           KELPFDNVIQRDKKLKLVMRIRKILVQQPDR+MSLKELGKFRRDLGLEKKRRLIALLKKF
Sbjct: 76  KELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLGLEKKRRLIALLKKF 135

Query: 121 PAVFEVVEEGAFSLRFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKRILLEK 180
           PAVFEVVEEGAFSL+FKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKRILLEK
Sbjct: 136 PAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKRILLEK 195

Query: 181 IAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAEEENRA 240
           IAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAEEENRA
Sbjct: 196 IAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAEEENRA 255

Query: 241 RELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGLKAGTPEK 300
           RELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSG+KAGTP+K
Sbjct: 256 RELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGIKAGTPQK 315

Query: 301 EKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKGDRDSV 360
           EKHACGVVHEIL+LTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKGDRDSV
Sbjct: 316 EKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKGDRDSV 375

Query: 361 FLREAYRDSHLIDKDRLLIIKEKLRALVVVPRFRGRGAPKSDSDGGETNQPDNMSGEEWS 420
           FLREAYRDS LIDKDRLLIIKEKLRALV VPRFR RGA   D+ GG+TNQP +MSGEEWS
Sbjct: 376 FLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTKGGDTNQPSDMSGEEWS 435

Query: 421 DVDNLLG---------DDDEFDDDDNGAFEDDWSDEDDTPPSFDGDQDGESINIGGRKQR 480
           DVDNLL          DDDEFDDD+N AFEDDWSDEDDTPPSF+GDQDGESINIG RKQ+
Sbjct: 436 DVDNLLDDDEFDDDEFDDDEFDDDNNEAFEDDWSDEDDTPPSFNGDQDGESINIGSRKQK 495

Query: 481 QVQNLQKASQSLLSPVLPDGRPRER 497
           QV +LQK  QS LSPVLPDGRPRER
Sbjct: 496 QVNDLQKVGQSRLSPVLPDGRPRER 510

[Close]

BLAST of Spg007868 vs. NCBI nr
Match: XP_022156569.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Momordica charantia])

HSP 1 Score: 841.6 bits (2173), Expect = 3.7e-240
Identity = 440/497 (88.53%), Postives = 463/497 (93.16%), Query Frame = 0


Query: 1   MSVPFILPHKAYFSENPSFSVKS-EFWGKNLYLRNGNDSSSGNLRKSHVLFQPIRAVVKR 60
           +SVPFILP K YFSENPSFS+KS EFWG+NL LR+  DSSS NLRK HV  QPIRAVVKR
Sbjct: 16  VSVPFILPRKPYFSENPSFSLKSEEFWGRNLDLRHRIDSSSSNLRKFHVPLQPIRAVVKR 75

Query: 61  RKELPFDNVIQRDKKLKLVMRIRKILVQQPDRIMSLKELGKFRRDLGLEKKRRLIALLKK 120
           RKEL FDNVIQRDKKLKLVMRIRKILVQ+PDRIMSLKELGKFRRDLGLEKKRRLIALLKK
Sbjct: 76  RKELKFDNVIQRDKKLKLVMRIRKILVQRPDRIMSLKELGKFRRDLGLEKKRRLIALLKK 135

Query: 121 FPAVFEVVEEGAFSLRFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKRILLE 180
           FPAVFEVVEEGAFSL+FKLT EAERLYLEELKIRNEMEGLLV+KLRKLLMMS DKRILLE
Sbjct: 136 FPAVFEVVEEGAFSLKFKLTPEAERLYLEELKIRNEMEGLLVVKLRKLLMMSIDKRILLE 195

Query: 181 KIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAEEENR 240
           KIAHLRTDFGLPLEFRDTICHRYP YFRVVAT RGPALELTHWDPELAVSAAELAEEENR
Sbjct: 196 KIAHLRTDFGLPLEFRDTICHRYPHYFRVVATGRGPALELTHWDPELAVSAAELAEEENR 255

Query: 241 ARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGLKAGTPE 300
           ARELEEKNLIIDRPLKFNRVKLPKGLNLSK EMRKISQFRDIPY+SPYSDFS LKAGTP+
Sbjct: 256 ARELEEKNLIIDRPLKFNRVKLPKGLNLSKGEMRKISQFRDIPYVSPYSDFSELKAGTPQ 315

Query: 301 KEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKGDRDS 360
           KEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFY+SLKGDRDS
Sbjct: 316 KEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYISLKGDRDS 375

Query: 361 VFLREAYRDSHLIDKDRLLIIKEKLRALVVVPRFRGRGAPKSDSDGGETNQPDNMSGEEW 420
           VFLREAYRDS LIDKDRLLIIKEKLRALV VPRFRGRGA KSD+DG ETNQPD++SGE+W
Sbjct: 376 VFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRGRGATKSDTDGEETNQPDDLSGEDW 435

Query: 421 SDVDNLLGDDDEFDDDDNGAFEDDWSDEDDTPPSFDGDQDGESINIGGRKQRQVQNLQKA 480
           SDVDNLLGDDD+ +DD +  ++D WSDEDDTPPSFDGD DGE+INI   KQ++V NLQK 
Sbjct: 436 SDVDNLLGDDDDDEDDGDDTYDDGWSDEDDTPPSFDGDGDGEAINIVSSKQKRVDNLQKV 495

Query: 481 SQSLLSPVLPDGRPRER 497
            QSLL+PVLPDGR RER
Sbjct: 496 GQSLLTPVLPDGRSRER 512

[Close]

BLAST of Spg007868 vs. NCBI nr
Match: KAG6592915.1 (Protein WHAT'S THIS FACTOR 1-like, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025320.1 Protein ROOT PRIMORDIUM DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 833.6 bits (2152), Expect = 1.0e-237
Identity = 439/498 (88.15%), Postives = 466/498 (93.57%), Query Frame = 0


Query: 1   MSVPFILPHKAYFSENPSFSVKSEFWGKNLYLRNGNDSSSG-NLRKSHVLFQPIRAVVKR 60
           MS+PF+LPH+ YF ENPS SVKSEFWGKNL LR+ ND  SG +LRKS V FQPIRA+VKR
Sbjct: 1   MSIPFVLPHRGYFFENPSLSVKSEFWGKNLDLRHRNDGFSGSDLRKSRVPFQPIRAIVKR 60

Query: 61  RKELPFDNVIQRDKKLKLVMRIRKILVQQPDRIMSLKELGKFRRDLGLEKKRRLIALLKK 120
           RKELPFDNVIQRDKKLKLVMRIRKILVQ PDR+MSLKELGKFRRDLGLEKKRRLIALLKK
Sbjct: 61  RKELPFDNVIQRDKKLKLVMRIRKILVQHPDRVMSLKELGKFRRDLGLEKKRRLIALLKK 120

Query: 121 FPAVFEVVEEGAFSLRFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKRILLE 180
           FPAVFEVVEEGAFSL+ KLTAEAERLYLEELKIRNEMEGLLV+KLRKLLMMS DKRILLE
Sbjct: 121 FPAVFEVVEEGAFSLKVKLTAEAERLYLEELKIRNEMEGLLVMKLRKLLMMSVDKRILLE 180

Query: 181 KIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAEEENR 240
           KIAHLRTDFGLPLEFR+TICH YPQYFRVVAT RGPALELTHWDPELAVSA+ELAEEENR
Sbjct: 181 KIAHLRTDFGLPLEFRETICHGYPQYFRVVATGRGPALELTHWDPELAVSASELAEEENR 240

Query: 241 ARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGLKAGTPE 300
           A ELEEKNLIIDRPLKFNRV+LPKGLN+SKSEMR+I QFRDIPYISPYSDFSGLKAGTPE
Sbjct: 241 AIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEMRRICQFRDIPYISPYSDFSGLKAGTPE 300

Query: 301 KEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKGDRDS 360
           KEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKGDRDS
Sbjct: 301 KEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKGDRDS 360

Query: 361 VFLREAYRDSHLIDKDRLLIIKEKLRALVVVPRFRGRGAPKSDSDGGETNQPDNMSGEEW 420
           VFLREAYR+S LIDKDRLLIIKEKLRALV VPR RGRGA K+D+DGG+ +QPD MSG+E 
Sbjct: 361 VFLREAYRNSQLIDKDRLLIIKEKLRALVAVPRIRGRGALKNDTDGGD-DQPDYMSGDES 420

Query: 421 SDVDNLLGDDDEFDDDDNGAFEDDWSD-EDDTPPSFDGDQDGESINIGGRKQRQVQNLQK 480
           SD+DNLL DDDEFDD+++GAFED+WSD EDDTPPSF+GD+DGESINI  RKQRQV N QK
Sbjct: 421 SDIDNLLDDDDEFDDNEDGAFEDNWSDEEDDTPPSFNGDRDGESINIEARKQRQVDNSQK 480

Query: 481 ASQSLLSPVLPDGRPRER 497
             QSLLSPVLPDGRPRER
Sbjct: 481 LDQSLLSPVLPDGRPRER 497

[Close]

BLAST of Spg007868 vs. ExPASy Swiss-Prot
Match: A0MFS5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01037 PE=3 SV=1)

HSP 1 Score: 615.1 bits (1585), Expect = 7.4e-175
Identity = 329/494 (66.60%), Postives = 395/494 (79.96%), Query Frame = 0


Query: 20  SVKSEFWGKNLYLRNGNDSSSGNLRKSHVLFQPIRAVVKRRKELPFDNVIQRDKKLKLVM 79
           + +S+F G+ L L N     S + RK+ V+ +P+RA VKRRKEL FD+V+QRDKKLKLV+
Sbjct: 40  AARSQFMGEGLILGNKYGFWSTS-RKTRVVVEPVRAAVKRRKELTFDSVVQRDKKLKLVL 99

Query: 80  RIRKILVQQPDRIMSLKELGKFRRDLGLEKKRRLIALLKKFPAVFEVVEEGAFSLRFKLT 139
            IRKILV QPDR+MSL+ LGK+RRDLGL+K+RR IALL+K+P VFE+VEEGA+SLRFK+T
Sbjct: 100 NIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRFIALLRKYPGVFEIVEEGAYSLRFKMT 159

Query: 140 AEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKRILLEKIAHLRTDFGLPLEFRDTIC 199
           +EAERLYL+E++IRNE+E +LV+KLRKL+MMS DKRILLEKI+HL+TD GLPLEFRDTIC
Sbjct: 160 SEAERLYLDEMRIRNELEDVLVVKLRKLVMMSIDKRILLEKISHLKTDLGLPLEFRDTIC 219

Query: 200 HRYPQYFRVVATERGPALELTHWDPELAVSAAELAEEENRARELEEKNLIIDRPLKFNRV 259
            RYPQYFRVV T RGPALELTHWDPELAVSAAEL+E++NR RE EE+NLIIDRP KFNRV
Sbjct: 220 QRYPQYFRVVPTPRGPALELTHWDPELAVSAAELSEDDNRTRESEERNLIIDRPPKFNRV 279

Query: 260 KLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGLKAGTPEKEKHACGVVHEILSLTLEKR 319
           KLP+GLNLSKSE RKISQFRD+ YISPY DFS L++GT EKEKHACGV+HE+LSLT EKR
Sbjct: 280 KLPRGLNLSKSETRKISQFRDMQYISPYKDFSHLRSGTLEKEKHACGVIHELLSLTTEKR 339

Query: 320 TLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKGDRDSVFLREAYRDSHLIDKDRLLI 379
           TLVDHLTHFREEFRFSQQLRGMLIRHPD+FYVSLKG+RDSVFLREAYR+S LIDKD L +
Sbjct: 340 TLVDHLTHFREEFRFSQQLRGMLIRHPDLFYVSLKGERDSVFLREAYRNSELIDKDPLTL 399

Query: 380 IKEKLRALVVVPRFRGRGAPKSDSDGGET----------NQPDNMSGEEWSDVDNLLGDD 439
           +KEK+RALV VPRF  RG P+ D +G E            + +    EEWSDVD  L  +
Sbjct: 400 VKEKMRALVSVPRFPRRGGPRKDEEGREVEIDGSDADGEEEEEESDAEEWSDVDGYLEGE 459

Query: 440 DEFDDDDNGAFEDDWSD---EDDTPPSFDGDQDGE---SINIG-GRKQRQVQNLQKASQS 497
           D  +DDD      DW+D   E+D PP+FD D + E   S+ IG     R+  + +K  + 
Sbjct: 460 DGGNDDDG-----DWTDDEGEEDVPPNFDDDDEDEEEDSVKIGLSPSSRKSSSPRKKEEK 519

[Close]

BLAST of Spg007868 vs. ExPASy Swiss-Prot
Match: Q65XL5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)

HSP 1 Score: 562.0 bits (1447), Expect = 7.5e-159
Identity = 301/454 (66.30%), Postives = 359/454 (79.07%), Query Frame = 0


Query: 54  RAVVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRIMSLKELGKFRRDLGLEKKRRL 113
           +A VKRRKE+PFDNVIQRDKKLKLV+++R ILV  PDR+MSL++LG+FRRDLGL +KRRL
Sbjct: 58  QAAVKRRKEIPFDNVIQRDKKLKLVLKLRNILVSNPDRVMSLRDLGRFRRDLGLTRKRRL 117

Query: 114 IALLKKFPAVFEVVEEGAFSLRFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSAD 173
           IALLK+FP VFEVVEEG +SLRF+LT  AERLYL+EL ++NE EGL V KLRKLLMMS D
Sbjct: 118 IALLKRFPGVFEVVEEGVYSLRFRLTPAAERLYLDELHLKNESEGLAVTKLRKLLMMSQD 177

Query: 174 KRILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAEL 233
           KRIL+EKIAHL+ D GLP EFRDTIC RYPQYFRVV  +RGP LELTHWDPELAVSAAE+
Sbjct: 178 KRILIEKIAHLKNDLGLPPEFRDTICLRYPQYFRVVQMDRGPGLELTHWDPELAVSAAEV 237

Query: 234 AEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGL 293
           AEEENRARE +E+NLIIDRPLKFNRVKLP+GL LS+ E R+++QF+++PYISPYSDFS L
Sbjct: 238 AEEENRAREEQERNLIIDRPLKFNRVKLPQGLKLSRGEARRVAQFKEMPYISPYSDFSHL 297

Query: 294 KAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSL 353
           ++G+ EKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQ LRGMLIRHPDMFYVSL
Sbjct: 298 RSGSAEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQSLRGMLIRHPDMFYVSL 357

Query: 354 KGDRDSVFLREAYRDSHLIDKDRLLIIKEKLRALVVVPRFRGRGAPKSDSDGGETNQPDN 413
           KGDRDSVFLREAY++S L++K +L+++KEK+RALV VPRF  RG P +  +   TN    
Sbjct: 358 KGDRDSVFLREAYKNSQLVEKSKLVLLKEKMRALVAVPRFPRRGVPATSEEADRTNGAAQ 417

Query: 414 M----------SGEEWSDVDNLLGDDDEFDDDDNGAFEDDW-SDEDDTPPSFDGDQDGES 473
           M            E  SD+++L+ +      D +  + D W  + DD+PP F+ D DG S
Sbjct: 418 MLSEGSDVEDDEDEGLSDMEDLISEISGGKSDTDYHWGDGWVGENDDSPPDFE-DDDGSS 477

Query: 474 INIGGRKQRQVQNLQKASQSLLSPVLPDGRPRER 497
           +       ++  N   A+     PV PDGRPRER
Sbjct: 478 LKEVKVTMKKTAN--SANGKAHVPVFPDGRPRER 508

[Close]

BLAST of Spg007868 vs. ExPASy Swiss-Prot
Match: B6TTV8 (Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1)

HSP 1 Score: 552.7 bits (1423), Expect = 4.5e-156
Identity = 296/455 (65.05%), Postives = 359/455 (78.90%), Query Frame = 0


Query: 54  RAVVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRIMSLKELGKFRRDLGLEKKRRL 113
           +A VKRRKE PFD VIQRDKKLKLV+++R ILV QPDR+MSL+ELG+FRRDLGL +KRRL
Sbjct: 52  QAAVKRRKEAPFDTVIQRDKKLKLVLKLRNILVAQPDRVMSLRELGRFRRDLGLTRKRRL 111

Query: 114 IALLKKFPAVFEVVEEGAFSLRFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSAD 173
           IALL++FP VF+VVEEG +SLRF+LT  AERLYL+EL++RNE EGL V KLRKLLMMS +
Sbjct: 112 IALLRRFPGVFDVVEEGVYSLRFRLTPAAERLYLDELRLRNESEGLAVAKLRKLLMMSQE 171

Query: 174 KRILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAEL 233
           KRIL+EK+AHL+ D GLP EFRDT+C RYPQYFRVV  +RGPALELTHWDPELAVSAAEL
Sbjct: 172 KRILIEKVAHLKHDLGLPPEFRDTVCLRYPQYFRVVRMDRGPALELTHWDPELAVSAAEL 231

Query: 234 AEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGL 293
           AEEE+RARE EE+NLIIDRPLKFNRV+LPKGL L++ E R+I++F+++PYISPY+DFS L
Sbjct: 232 AEEESRAREAEERNLIIDRPLKFNRVRLPKGLKLTRGEARRIARFKEMPYISPYADFSHL 291

Query: 294 KAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSL 353
           ++G+ EKEKHACGVVHEILSLT+EKRTLVDHLTHFREEFRFSQ LRGM+IRHPDMFYVS 
Sbjct: 292 RSGSDEKEKHACGVVHEILSLTVEKRTLVDHLTHFREEFRFSQSLRGMIIRHPDMFYVSF 351

Query: 354 KGDRDSVFLREAYRDSHLIDKDRLLIIKEKLRALVVVPRFRGRGA----PKSDSDGGETN 413
           KGDRDSVFLREAY+DS L++K++L+++KEK+RALV VPRF  R A     +++   G   
Sbjct: 352 KGDRDSVFLREAYKDSQLVEKNQLVLLKEKMRALVAVPRFPRRAAVGTGEEAEGMNGSLQ 411

Query: 414 QPDNMSGEEWSDVDNLLGDDDEFDDDDNGAFED---DWSD-----EDDTPPSFDGDQDGE 473
             D +S EE+ D D  L D ++   + +G   D   +W D      DD+PP F  D+   
Sbjct: 412 SRDQVSDEEYDDEDEGLSDMEDLISELSGGKSDADYEWGDGWFGENDDSPPDFGDDEVKV 471

Query: 474 SINIGGRKQRQVQNLQKASQSLLSPVLPDGRPRER 497
           ++ I             A+ S   PV PDGRPRER
Sbjct: 472 AMKIAD---------GSANGSAPVPVFPDGRPRER 497

[Close]

BLAST of Spg007868 vs. ExPASy Swiss-Prot
Match: Q689D6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 6.5e-38
Identity = 113/351 (32.19%), Postives = 196/351 (55.84%), Query Frame = 0


Query: 59  RRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRIMSLKELGKFRRDLGLE-KKRRLIALL 118
           R ++  +DN ++ +KK++ V++   +++ QP+  +++  L    R LGL  K+    A L
Sbjct: 46  RVRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLARRLGLGFKQHEPGAFL 105

Query: 119 KKFPAVFEVVEEGAFSLRF-KLTAEAERLYLEELKIRNEMEGLL------VIKLRKLLMM 178
            KFP VFE+ E     + + +LT +A    L++  IR+E E +L      V +LRKL+MM
Sbjct: 106 LKFPHVFEIYEHPVQRILYCRLTRKA----LDQ--IRHEHEAVLDQIPDAVTRLRKLVMM 165

Query: 179 SADKRILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATE--RGPALELTHWDPELAV 238
           S   RI LE +   RT+FGLP +F  ++  ++PQ+FR++  E  R   +E+   DP L++
Sbjct: 166 SNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIVEKDPNLSI 225

Query: 239 SAAELAEEENRARELEEKNLIID-RPLKFN-RVKLPKGLNLSKSEMRKISQFRDIPYISP 298
            A E      R RE+E +   ID   ++F+  V  P G  + K     + +++ +PY SP
Sbjct: 226 CAIE------RVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSP 285

Query: 299 YSDFSGLKAGTPEK----EKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGML 358
           Y D SG    + E     EK +   +HE+LSLT+EK+  ++ + HFR      ++L+  L
Sbjct: 286 YEDISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFL 345

Query: 359 IRHPDMFYVSLKGD---RDSVFLREAYRDSHLIDKDRLLIIKEKLRALVVV 391
           ++H  +FY+S +G+     +VFLRE Y+   L++ + + + + +L  LV++
Sbjct: 346 LQHQGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVLM 384

[Close]

BLAST of Spg007868 vs. ExPASy Swiss-Prot
Match: Q9ZUZ6 (Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WTF9 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 7.0e-24
Identity = 95/334 (28.44%), Postives = 161/334 (48.20%), Query Frame = 0


Query: 57  VKRRKELPFDNV--IQRDKKLKLVMRIRKILVQQPDRIMSLKELGKFRRDLGLEKKRRLI 116
           +K +++  FDN+  I R  +LK V+ ++  +VQ+P+R + +  + K  R   +  K  + 
Sbjct: 29  MKWKRDPYFDNIEHILRSSQLKSVVSLKNCIVQEPNRCIPISAISKKTRQFDVSTK--IA 88

Query: 117 ALLKKFPAVFEVVEEGAFSLR-FKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSAD 176
             L+KFP++FE      ++L  F+LT EA  L  +E  +       L  +L+KL++MS D
Sbjct: 89  HFLRKFPSIFEEFVGPEYNLPWFRLTPEATELDRQERVVYQTSADDLRDRLKKLILMSKD 148

Query: 177 KRILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATE---RGPALELTHWDPELAVSA 236
             + L  +  ++   GLP ++           FR V  E   +G A++    D  L+V  
Sbjct: 149 NVLPLSIVQGMKWYLGLPDDYLQFPDMNLDSSFRFVDMEDGVKGLAVDYNGGDKVLSVLQ 208

Query: 237 AELAEEENRARELEEKNLIIDRPLKFNRVKLP-KGLNLSKSEMRKISQFRDIPYISPYSD 296
               ++      LEE    I+ PL       P KG  L       + +F+ +PY+SPY D
Sbjct: 209 KNAMKKRRGEVSLEE----IEFPL------FPSKGCRLRVKIEDWLMEFQKLPYVSPYDD 268

Query: 297 FSGLKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMF 356
           +S L   +   EK   G +HE+L L +E       L   ++ F   Q++     RHP +F
Sbjct: 269 YSCLDPSSDIAEKRVVGFLHELLCLFVEHSAERKKLLCLKKHFGLPQKVHKAFERHPQIF 328

Query: 357 YVSLKGDRDSVFLREAYRDSHLIDKDRLLIIKEK 384
           Y+S+K    +  LRE YRD   ++   +L +++K
Sbjct: 329 YLSMKNKTCTAILREPYRDKASVETHPVLGVRKK 350

[Close]

BLAST of Spg007868 vs. ExPASy TrEMBL
Match: A0A1S3CG79 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103500096 PE=4 SV=1)

HSP 1 Score: 848.6 bits (2191), Expect = 1.5e-242
Identity = 449/502 (89.44%), Postives = 466/502 (92.83%), Query Frame = 0


Query: 1   MSVPFILPHKAYFSENPSFSVKSEFWGKNLYLRNGNDSSSGNLRKSHVLFQPIRAVVKRR 60
           +SVPFIL HK+Y      +SVKS+FWGKNL LRN ND    NLRK+H  FQPIRAVVKRR
Sbjct: 16  ISVPFILGHKSY------YSVKSQFWGKNLDLRNRND----NLRKAHDPFQPIRAVVKRR 75

Query: 61  KELPFDNVIQRDKKLKLVMRIRKILVQQPDRIMSLKELGKFRRDLGLEKKRRLIALLKKF 120
           KELPFDNVIQRDKKLKLVMRIRKILVQQPDR+MSLKELGKFRRDLGLEKKRRLIALLKKF
Sbjct: 76  KELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLGLEKKRRLIALLKKF 135

Query: 121 PAVFEVVEEGAFSLRFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKRILLEK 180
           PAVFEVVEEGAFSL+FKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKRILLEK
Sbjct: 136 PAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKRILLEK 195

Query: 181 IAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAEEENRA 240
           IAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAEEENRA
Sbjct: 196 IAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAEEENRA 255

Query: 241 RELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGLKAGTPEK 300
           RELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSG+KAGTP+K
Sbjct: 256 RELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGIKAGTPQK 315

Query: 301 EKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKGDRDSV 360
           EKHACGVVHEIL+LTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKGDRDSV
Sbjct: 316 EKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKGDRDSV 375

Query: 361 FLREAYRDSHLIDKDRLLIIKEKLRALVVVPRFRGRGAPKSDSDGGETNQPDNMSGEEWS 420
           FLREAYRDS LIDKDRLLIIKEKLRALV VPRFR RGA   D+ GG+TNQP +MSGEEWS
Sbjct: 376 FLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTKGGDTNQPSDMSGEEWS 435

Query: 421 DVDNLLG------DDDEFDDDDNGAFEDDWSDEDDTPPSFDGDQDGESINIGGRKQRQVQ 480
           DVDNLL       DDDEFDDD+N AFEDDWSDEDDTPPSF+GDQDGESINIG RKQ+QV 
Sbjct: 436 DVDNLLDDDDDEFDDDEFDDDNNEAFEDDWSDEDDTPPSFNGDQDGESINIGSRKQKQVN 495

Query: 481 NLQKASQSLLSPVLPDGRPRER 497
           +LQK  QS LSPVLPDGRPRER
Sbjct: 496 DLQKVGQSRLSPVLPDGRPRER 507

[Close]

BLAST of Spg007868 vs. ExPASy TrEMBL
Match: A0A5D3BY23 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold675G00850 PE=4 SV=1)

HSP 1 Score: 847.4 bits (2188), Expect = 3.3e-242
Identity = 449/505 (88.91%), Postives = 466/505 (92.28%), Query Frame = 0


Query: 1   MSVPFILPHKAYFSENPSFSVKSEFWGKNLYLRNGNDSSSGNLRKSHVLFQPIRAVVKRR 60
           +SVPFIL HK+Y      +SVKS+FWGKNL LRN ND    NLRK+H  FQPIRAVVKRR
Sbjct: 16  ISVPFILGHKSY------YSVKSQFWGKNLDLRNRND----NLRKAHDPFQPIRAVVKRR 75

Query: 61  KELPFDNVIQRDKKLKLVMRIRKILVQQPDRIMSLKELGKFRRDLGLEKKRRLIALLKKF 120
           KELPFDNVIQRDKKLKLVMRIRKILVQQPDR+MSLKELGKFRRDLGLEKKRRLIALLKKF
Sbjct: 76  KELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLGLEKKRRLIALLKKF 135

Query: 121 PAVFEVVEEGAFSLRFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKRILLEK 180
           PAVFEVVEEGAFSL+FKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKRILLEK
Sbjct: 136 PAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKRILLEK 195

Query: 181 IAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAEEENRA 240
           IAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAEEENRA
Sbjct: 196 IAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAEEENRA 255

Query: 241 RELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGLKAGTPEK 300
           RELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSG+KAGTP+K
Sbjct: 256 RELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGIKAGTPQK 315

Query: 301 EKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKGDRDSV 360
           EKHACGVVHEIL+LTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKGDRDSV
Sbjct: 316 EKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKGDRDSV 375

Query: 361 FLREAYRDSHLIDKDRLLIIKEKLRALVVVPRFRGRGAPKSDSDGGETNQPDNMSGEEWS 420
           FLREAYRDS LIDKDRLLIIKEKLRALV VPRFR RGA   D+ GG+TNQP +MSGEEWS
Sbjct: 376 FLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTKGGDTNQPSDMSGEEWS 435

Query: 421 DVDNLLG---------DDDEFDDDDNGAFEDDWSDEDDTPPSFDGDQDGESINIGGRKQR 480
           DVDNLL          DDDEFDDD+N AFEDDWSDEDDTPPSF+GDQDGESINIG RKQ+
Sbjct: 436 DVDNLLDDDEFDDDEFDDDEFDDDNNEAFEDDWSDEDDTPPSFNGDQDGESINIGSRKQK 495

Query: 481 QVQNLQKASQSLLSPVLPDGRPRER 497
           QV +LQK  QS LSPVLPDGRPRER
Sbjct: 496 QVNDLQKVGQSRLSPVLPDGRPRER 510

[Close]

BLAST of Spg007868 vs. ExPASy TrEMBL
Match: A0A6J1DTV5 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Momordica charantia OX=3673 GN=LOC111023444 PE=4 SV=1)

HSP 1 Score: 841.6 bits (2173), Expect = 1.8e-240
Identity = 440/497 (88.53%), Postives = 463/497 (93.16%), Query Frame = 0


Query: 1   MSVPFILPHKAYFSENPSFSVKS-EFWGKNLYLRNGNDSSSGNLRKSHVLFQPIRAVVKR 60
           +SVPFILP K YFSENPSFS+KS EFWG+NL LR+  DSSS NLRK HV  QPIRAVVKR
Sbjct: 16  VSVPFILPRKPYFSENPSFSLKSEEFWGRNLDLRHRIDSSSSNLRKFHVPLQPIRAVVKR 75

Query: 61  RKELPFDNVIQRDKKLKLVMRIRKILVQQPDRIMSLKELGKFRRDLGLEKKRRLIALLKK 120
           RKEL FDNVIQRDKKLKLVMRIRKILVQ+PDRIMSLKELGKFRRDLGLEKKRRLIALLKK
Sbjct: 76  RKELKFDNVIQRDKKLKLVMRIRKILVQRPDRIMSLKELGKFRRDLGLEKKRRLIALLKK 135

Query: 121 FPAVFEVVEEGAFSLRFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKRILLE 180
           FPAVFEVVEEGAFSL+FKLT EAERLYLEELKIRNEMEGLLV+KLRKLLMMS DKRILLE
Sbjct: 136 FPAVFEVVEEGAFSLKFKLTPEAERLYLEELKIRNEMEGLLVVKLRKLLMMSIDKRILLE 195

Query: 181 KIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAEEENR 240
           KIAHLRTDFGLPLEFRDTICHRYP YFRVVAT RGPALELTHWDPELAVSAAELAEEENR
Sbjct: 196 KIAHLRTDFGLPLEFRDTICHRYPHYFRVVATGRGPALELTHWDPELAVSAAELAEEENR 255

Query: 241 ARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGLKAGTPE 300
           ARELEEKNLIIDRPLKFNRVKLPKGLNLSK EMRKISQFRDIPY+SPYSDFS LKAGTP+
Sbjct: 256 ARELEEKNLIIDRPLKFNRVKLPKGLNLSKGEMRKISQFRDIPYVSPYSDFSELKAGTPQ 315

Query: 301 KEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKGDRDS 360
           KEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFY+SLKGDRDS
Sbjct: 316 KEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYISLKGDRDS 375

Query: 361 VFLREAYRDSHLIDKDRLLIIKEKLRALVVVPRFRGRGAPKSDSDGGETNQPDNMSGEEW 420
           VFLREAYRDS LIDKDRLLIIKEKLRALV VPRFRGRGA KSD+DG ETNQPD++SGE+W
Sbjct: 376 VFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRGRGATKSDTDGEETNQPDDLSGEDW 435

Query: 421 SDVDNLLGDDDEFDDDDNGAFEDDWSDEDDTPPSFDGDQDGESINIGGRKQRQVQNLQKA 480
           SDVDNLLGDDD+ +DD +  ++D WSDEDDTPPSFDGD DGE+INI   KQ++V NLQK 
Sbjct: 436 SDVDNLLGDDDDDEDDGDDTYDDGWSDEDDTPPSFDGDGDGEAINIVSSKQKRVDNLQKV 495

Query: 481 SQSLLSPVLPDGRPRER 497
            QSLL+PVLPDGR RER
Sbjct: 496 GQSLLTPVLPDGRSRER 512

[Close]

BLAST of Spg007868 vs. ExPASy TrEMBL
Match: A0A6J1H780 (protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111461117 PE=4 SV=1)

HSP 1 Score: 833.6 bits (2152), Expect = 4.9e-238
Identity = 439/498 (88.15%), Postives = 466/498 (93.57%), Query Frame = 0


Query: 1   MSVPFILPHKAYFSENPSFSVKSEFWGKNLYLRNGNDSSSG-NLRKSHVLFQPIRAVVKR 60
           MS+PF+LPH+ YF ENPS SVKSEFWGKNL LR+ ND  SG +LRKS V FQPIRA+VKR
Sbjct: 16  MSIPFVLPHRGYFFENPSLSVKSEFWGKNLDLRHRNDGFSGSDLRKSRVPFQPIRAIVKR 75

Query: 61  RKELPFDNVIQRDKKLKLVMRIRKILVQQPDRIMSLKELGKFRRDLGLEKKRRLIALLKK 120
           RKELPFDNVIQRDKKLKLVMRIRKILVQ PDR+MSLKELGKFRRDLGLEKKRRLIALLKK
Sbjct: 76  RKELPFDNVIQRDKKLKLVMRIRKILVQHPDRVMSLKELGKFRRDLGLEKKRRLIALLKK 135

Query: 121 FPAVFEVVEEGAFSLRFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKRILLE 180
           FPAVFEVVEEGAFSL+ KLTAEAERLYLEELKIRNEMEGLLV+KLRKLLMMS DKRILLE
Sbjct: 136 FPAVFEVVEEGAFSLKVKLTAEAERLYLEELKIRNEMEGLLVMKLRKLLMMSVDKRILLE 195

Query: 181 KIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAEEENR 240
           KIAHLRTDFGLPLEFR+TICH YPQYFRVVAT RGPALELTHWDPELAVSA+ELAEEENR
Sbjct: 196 KIAHLRTDFGLPLEFRETICHGYPQYFRVVATGRGPALELTHWDPELAVSASELAEEENR 255

Query: 241 ARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGLKAGTPE 300
           A ELEEKNLIIDRPLKFNRV+LPKGLN+SKSEMR+I QFRDIPYISPYSDFSGLKAGTPE
Sbjct: 256 AIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEMRRICQFRDIPYISPYSDFSGLKAGTPE 315

Query: 301 KEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKGDRDS 360
           KEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKGDRDS
Sbjct: 316 KEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKGDRDS 375

Query: 361 VFLREAYRDSHLIDKDRLLIIKEKLRALVVVPRFRGRGAPKSDSDGGETNQPDNMSGEEW 420
           VFLREAYR+S LIDKDRLLIIKEKLRALV VPR RGRGA K+D+DGG+ +QPD MSG+E 
Sbjct: 376 VFLREAYRNSQLIDKDRLLIIKEKLRALVAVPRIRGRGALKNDTDGGD-DQPDYMSGDES 435

Query: 421 SDVDNLLGDDDEFDDDDNGAFEDDWSD-EDDTPPSFDGDQDGESINIGGRKQRQVQNLQK 480
           SD+DNLL DDDEFDD+++GAFED+WSD EDDTPPSF+GD+DGESINI  RKQRQV N QK
Sbjct: 436 SDIDNLLDDDDEFDDNEDGAFEDNWSDEEDDTPPSFNGDRDGESINIEARKQRQVDNSQK 495

Query: 481 ASQSLLSPVLPDGRPRER 497
             QSLLSPVLPDGRPRER
Sbjct: 496 LDQSLLSPVLPDGRPRER 512

[Close]

BLAST of Spg007868 vs. ExPASy TrEMBL
Match: A0A6J1KW65 (protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111498122 PE=4 SV=1)

HSP 1 Score: 822.4 bits (2123), Expect = 1.1e-234
Identity = 436/498 (87.55%), Postives = 462/498 (92.77%), Query Frame = 0


Query: 1   MSVPFILPHKAYFSENPSFSVKSEFWGKNLYLRNGNDSSSG-NLRKSHVLFQPIRAVVKR 60
           MS+PF+LPH+AYF ENPS SVKSEFWGKNL LR+ ND  SG +LRKS V FQPI A+VKR
Sbjct: 16  MSIPFVLPHRAYFFENPSSSVKSEFWGKNLDLRHRNDGFSGSDLRKSRVPFQPITAIVKR 75

Query: 61  RKELPFDNVIQRDKKLKLVMRIRKILVQQPDRIMSLKELGKFRRDLGLEKKRRLIALLKK 120
           RKELPFDNVIQRDKKLKLVMRIRKILVQ PDR+MSLKELGKFRRDLGLEKKRRLIALLKK
Sbjct: 76  RKELPFDNVIQRDKKLKLVMRIRKILVQHPDRVMSLKELGKFRRDLGLEKKRRLIALLKK 135

Query: 121 FPAVFEVVEEGAFSLRFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKRILLE 180
           FPAVFEVVEEGAFSL+ KLTAEAE LYLEELKIRNEMEGLLV+KLRKLLMMS DKRILLE
Sbjct: 136 FPAVFEVVEEGAFSLKVKLTAEAESLYLEELKIRNEMEGLLVMKLRKLLMMSVDKRILLE 195

Query: 181 KIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAEEENR 240
           KIAHLRTDFGLPLEFR+TICH YPQYFRVVAT RGPALELTHWDPELAVSA+ELAEEENR
Sbjct: 196 KIAHLRTDFGLPLEFRETICHGYPQYFRVVATGRGPALELTHWDPELAVSASELAEEENR 255

Query: 241 ARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGLKAGTPE 300
           A ELEEKNLIIDRPLKFNRV+LPKGLN+SKSEMR+I QFRDIPYISPYSDFSGLKAGTPE
Sbjct: 256 AIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEMRRICQFRDIPYISPYSDFSGLKAGTPE 315

Query: 301 KEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKGDRDS 360
           KEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKGDRDS
Sbjct: 316 KEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKGDRDS 375

Query: 361 VFLREAYRDSHLIDKDRLLIIKEKLRALVVVPRFRGRGAPKSDSDGGETNQPDNMSGEEW 420
           VFLREAYR+S LIDKDRLLIIKEKLRALV VPR RGRGA K+D+DGG+ +QPD MSGEE 
Sbjct: 376 VFLREAYRNSQLIDKDRLLIIKEKLRALVAVPRIRGRGALKNDTDGGD-DQPDYMSGEES 435

Query: 421 SDVDNLLGDDDEFDDDDNGAFEDDWSD-EDDTPPSFDGDQDGESINIGGRKQRQVQNLQK 480
           SD+DNLL D DEFDD+++GAFED+WSD EDDTPPSF+ D+DGESINI  RKQ QV N QK
Sbjct: 436 SDIDNLLDDGDEFDDNEDGAFEDNWSDEEDDTPPSFNVDRDGESINIEARKQSQVDNSQK 495

Query: 481 ASQSLLSPVLPDGRPRER 497
             QSLLSPVLPDGRPRER
Sbjct: 496 LDQSLLSPVLPDGRPRER 512

[Close]

BLAST of Spg007868 vs. TAIR 10
Match: AT4G01037.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 615.1 bits (1585), Expect = 5.3e-176
Identity = 329/494 (66.60%), Postives = 395/494 (79.96%), Query Frame = 0


Query: 20  SVKSEFWGKNLYLRNGNDSSSGNLRKSHVLFQPIRAVVKRRKELPFDNVIQRDKKLKLVM 79
           + +S+F G+ L L N     S + RK+ V+ +P+RA VKRRKEL FD+V+QRDKKLKLV+
Sbjct: 40  AARSQFMGEGLILGNKYGFWSTS-RKTRVVVEPVRAAVKRRKELTFDSVVQRDKKLKLVL 99

Query: 80  RIRKILVQQPDRIMSLKELGKFRRDLGLEKKRRLIALLKKFPAVFEVVEEGAFSLRFKLT 139
            IRKILV QPDR+MSL+ LGK+RRDLGL+K+RR IALL+K+P VFE+VEEGA+SLRFK+T
Sbjct: 100 NIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRFIALLRKYPGVFEIVEEGAYSLRFKMT 159

Query: 140 AEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKRILLEKIAHLRTDFGLPLEFRDTIC 199
           +EAERLYL+E++IRNE+E +LV+KLRKL+MMS DKRILLEKI+HL+TD GLPLEFRDTIC
Sbjct: 160 SEAERLYLDEMRIRNELEDVLVVKLRKLVMMSIDKRILLEKISHLKTDLGLPLEFRDTIC 219

Query: 200 HRYPQYFRVVATERGPALELTHWDPELAVSAAELAEEENRARELEEKNLIIDRPLKFNRV 259
            RYPQYFRVV T RGPALELTHWDPELAVSAAEL+E++NR RE EE+NLIIDRP KFNRV
Sbjct: 220 QRYPQYFRVVPTPRGPALELTHWDPELAVSAAELSEDDNRTRESEERNLIIDRPPKFNRV 279

Query: 260 KLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGLKAGTPEKEKHACGVVHEILSLTLEKR 319
           KLP+GLNLSKSE RKISQFRD+ YISPY DFS L++GT EKEKHACGV+HE+LSLT EKR
Sbjct: 280 KLPRGLNLSKSETRKISQFRDMQYISPYKDFSHLRSGTLEKEKHACGVIHELLSLTTEKR 339

Query: 320 TLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKGDRDSVFLREAYRDSHLIDKDRLLI 379
           TLVDHLTHFREEFRFSQQLRGMLIRHPD+FYVSLKG+RDSVFLREAYR+S LIDKD L +
Sbjct: 340 TLVDHLTHFREEFRFSQQLRGMLIRHPDLFYVSLKGERDSVFLREAYRNSELIDKDPLTL 399

Query: 380 IKEKLRALVVVPRFRGRGAPKSDSDGGET----------NQPDNMSGEEWSDVDNLLGDD 439
           +KEK+RALV VPRF  RG P+ D +G E            + +    EEWSDVD  L  +
Sbjct: 400 VKEKMRALVSVPRFPRRGGPRKDEEGREVEIDGSDADGEEEEEESDAEEWSDVDGYLEGE 459

Query: 440 DEFDDDDNGAFEDDWSD---EDDTPPSFDGDQDGE---SINIG-GRKQRQVQNLQKASQS 497
           D  +DDD      DW+D   E+D PP+FD D + E   S+ IG     R+  + +K  + 
Sbjct: 460 DGGNDDDG-----DWTDDEGEEDVPPNFDDDDEDEEEDSVKIGLSPSSRKSSSPRKKEEK 519

[Close]

BLAST of Spg007868 vs. TAIR 10
Match: AT5G62990.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 233.8 bits (595), Expect = 3.3e-61
Identity = 157/426 (36.85%), Postives = 242/426 (56.81%), Query Frame = 0


Query: 66  DNVIQRDKKLKLVMRIRKILVQQPDRIMSLKELGKFRRDLGLEKKRRLIALLKKFPAVFE 125
           D  + +  +++ V ++  +L+ +P   + ++ L K R  L +E    ++++++++P +FE
Sbjct: 66  DRHVVKQNRVRFVQKLNTLLLSKPKHYIPIEILYKCRSYLCIENPLAILSMIRRYPTIFE 125

Query: 126 V-----------VEEGAFSLRFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADK 185
           +             +    L  +LT+ A  L ++EL +++E+   L  KL+KLLM+S+ +
Sbjct: 126 LFTTPTPHLPMNATKPLSQLCVRLTSAASSLAMQELNLKSEISDKLATKLQKLLMLSSHR 185

Query: 186 RILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELA 245
           R+LL K+ H+  DFG P  FR  +C+ YP  F+ V T  G ALEL   DPELA       
Sbjct: 186 RLLLSKLVHIAPDFGFPPNFRSRLCNDYPDKFKTVDTSYGRALELVSSDPELA------- 245

Query: 246 EEENRARELE-EKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSG- 305
              N+    E ++ LI+DRPLKF R+ L +GLNL +     + +FR+ P + PY   S  
Sbjct: 246 ---NQMPSPEVDRGLIVDRPLKFKRLNLRRGLNLKRRHQGFLIKFRESPDVCPYKMSSDY 305

Query: 306 LKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVS 365
           L + + E EK AC VV E+L LT+EKRTL+DHLTHFR+EF    +LR +++RHP++FYVS
Sbjct: 306 LASESIEAEKRACAVVREVLGLTVEKRTLIDHLTHFRKEFSLPNKLRDLIVRHPELFYVS 365

Query: 366 LKGDRDSVFLREAYRDS-HLIDKDRLLIIKEKLRALV-----VVPRFRGRGAPKSDSDGG 425
           +KG RDSVFL EAY D+  L+DKD  L+I+E+L  L+     +    R +GA   D    
Sbjct: 366 IKGMRDSVFLVEAYNDNGDLLDKDERLVIRERLIDLIQEGKRIRRERRRKGATLGDKSVE 425

Query: 426 ETNQPDNMSGEEWSDVDNLLGDDDE--FDDDDNGA-FEDDWSDEDDTPPSFDGDQDGESI 470
           E  + D    +  SD+D+   D  E  FD +D G  +  D  D+DD     +   +GES+
Sbjct: 426 EKRKDDETIDDYDSDLDDEYEDGFENLFDSEDLGVEYHFDEEDDDD-----EAGVNGESV 476

[Close]

BLAST of Spg007868 vs. TAIR 10
Match: AT3G63090.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 186.8 bits (473), Expect = 4.6e-47
Identity = 135/355 (38.03%), Postives = 195/355 (54.93%), Query Frame = 0


Query: 45  KSHVLFQPIRAV----VKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRIMSLKELGK 104
           K H L   IR +    V  +K+   D  I++DK+ KL  R+ K ++ +P +++ L+ L K
Sbjct: 20  KEHSLGIQIRWISSLKVVWKKDTRLDEAIEQDKRYKLCARVVKEVLNEPGQVIPLRYLEK 79

Query: 105 FRRDLGLEKKRRLIALLKKFPAVFEV----VEEGAFSLRFKLTAEAERLYL-EELKIRNE 164
            R  L L  K +  + ++  P++FE+    ++  +  ++F       R +L EE +I +E
Sbjct: 80  RRERLRLTFKAK--SFVEMNPSLFEIYYDRIKPKSDPVQFLRPTPRLRAFLDEEQRIYSE 139

Query: 165 MEGLLVIKLRKLLMMSADKRILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVA-TERG 224
            E LLV KL +LLMM+ DK I  +K+ H++ DFG P +F   +  +YP YFR+    E G
Sbjct: 140 NEPLLVSKLCQLLMMAKDKVISADKLVHVKRDFGFPNDFLMKLVQKYPNYFRLTGLPEEG 199

Query: 225 PA-LELTHWDPELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMR 284
            + LEL  W+P+ A S  EL     RA +   K  +  RP  +N VKLP G  L K    
Sbjct: 200 KSFLELVSWNPDFAKSKIEL-----RAEDETLKTGVRIRP-NYN-VKLPSGFFLRKEMRE 259

Query: 285 KISQFRDIPYISPYSDFSGLKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFR 344
               + +  YISPY D S L   + E EK   GVVHE+LSL+L KR  V  L  F +EFR
Sbjct: 260 WTRDWLEQDYISPYEDVSHLDQASKEMEKRTVGVVHELLSLSLLKRVPVPTLGKFCDEFR 319

Query: 345 FSQQLRGMLIRHPDMFYVSLKGDRDSVFLREAYRDSHLIDKDRLLIIKEKLRALV 389
           FS     +  RH  +FY+SLKG   +  LREAY+D  L+D+D LL IK+K   L+
Sbjct: 320 FSNAFSSVFTRHSGIFYLSLKGGIKTAVLREAYKDDELVDRDPLLAIKDKFLRLL 365

[Close]

BLAST of Spg007868 vs. TAIR 10
Match: AT5G21970.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 178.3 bits (451), Expect = 1.6e-44
Identity = 140/412 (33.98%), Postives = 215/412 (52.18%), Query Frame = 0


Query: 54  RAVVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRIMSLKELGKFRRDLGLEKKRRL 113
           R+  KR +EL  +   ++ K    V+ + ++L  + D IM+++   ++RR + L K  ++
Sbjct: 52  RSREKRVQEL--EIATEKWKIASKVIFLMEVLKGERDMIMTVRSFEQYRRQINLPKPHKI 111

Query: 114 IALLKKFPAVFEVVEEGAFSLRFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSAD 173
              ++K P +FE+ ++    L   LT   E L  E  K+  E        + + LMMS D
Sbjct: 112 SDFIRKSPKLFELYKDQRGVLWCGLTEGGEDLLDEHDKLLEENGDKAAEHVTRCLMMSVD 171

Query: 174 KRILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPA-LELTHWDPELAVSAAE 233
           K++ L+KI H R DFGLPL+FR    + +PQ+F+VV    G   LEL  W+P  A++   
Sbjct: 172 KKLPLDKIVHFRRDFGLPLDFRINWVYNFPQHFKVVKLGDGEEYLELVSWNPAWAIT--- 231

Query: 234 LAEEENRARELEEKNLIIDRPLKFN--------RVKLPKGLNLSKSEMRKISQFRDIPYI 293
                    ELE+K L I    +           +K P           KI  F+   Y+
Sbjct: 232 ---------ELEKKTLGITEDCEHKPGMLSLAFPMKFPPSYKKMYRYRGKIEHFQKRSYL 291

Query: 294 SPYSDFSGLKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 353
           SPY+D  GL+AG+ E +K A  V+HE+LS TLEKR + DHLTHFR EF   Q+L  + ++
Sbjct: 292 SPYADARGLEAGSKEFDKRAIAVMHELLSFTLEKRLVTDHLTHFRREFVMPQKLMRIFLK 351

Query: 354 HPDMFYVSLKGDRDSVFLREAYRDSHLIDKDRLLIIKEKLRALVVVPRFRGRG---APKS 413
           H  +FYVS +G R SVFL E Y    LI+K  L++ KEK   L+    +RGR       S
Sbjct: 352 HCGIFYVSERGKRFSVFLTEGYEGPELIEKCPLILWKEK---LLKFTGYRGRKRDIQTYS 411

Query: 414 DS---------DGGETNQPDNMSGEEWSDVDNLLGDDDEFD-DDDNGAFEDD 444
           D+         + G  ++  ++  E+  D D+++ DDDE D  + N A+E++
Sbjct: 412 DTLDMEERELLESGSGDEDLSVGFEKDGDYDDVVTDDDEMDIGEVNDAYEEN 446

[Close]

BLAST of Spg007868 vs. TAIR 10
Match: AT4G08940.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 177.6 bits (449), Expect = 2.8e-44
Identity = 127/383 (33.16%), Postives = 200/383 (52.22%), Query Frame = 0


Query: 7   LPHKAYFSENPSFSVKSEFWGKNLYLRNGNDSSSGNLRKSHVLFQPIRAVVKRRKELP-F 66
           LP  +  S NP+ + ++  +  +  +    D      +K        +++     +LP  
Sbjct: 14  LPQISSSSPNPNPNFRTSPFSTSFLITKTPDKLKKKRKKPE--SARTKSIQHESTKLPHL 73

Query: 67  DNVIQRDKKLKLVMRIRKILVQQPDRIMSLKELGKFRRDLGLEKKRRLIALLKKFPAVFE 126
           ++++ RD   + ++R ++ + +QP+RI+ L + GK  R+LG  + R++   + K P +F+
Sbjct: 74  ESLVSRDAHFRFLIRSKEFISKQPERILRLDDAGKLYRELGFPRGRKVTKFIPKHPLIFQ 133

Query: 127 VVEEGAFSLRFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKRILLEKIAHLR 186
                   +    T   E L  EE  +   ME   V  +RKLLMM+ DKRILL KI H R
Sbjct: 134 TYRHSDGKIWLGFTEFMEDLLDEEKGLMESMELDRVNCVRKLLMMTKDKRILLSKIHHTR 193

Query: 187 TDFGLPLEFRDTICHRYPQYFRVVATERG-PALELTHWDPELAVSAAE--LAEEENRARE 246
             FG+P +FRD +  +YP YFRVV    G   LEL +WD  LAVS  E     +E++A+ 
Sbjct: 194 LLFGIPEDFRDRVA-KYPDYFRVVTGGDGNRVLELVNWDTNLAVSELERLFMIDEDKAK- 253

Query: 247 LEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGLKAGTPEKEK 306
                    R  KF  VK  K L L + + RK++     P +SPYSD   L   + E EK
Sbjct: 254 ---------RVFKF-PVKHGKELELEEKDTRKLNLLNTFPLVSPYSDGWKLDVWSLEAEK 313

Query: 307 HACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKGDRDSVFL 366
           +  G+VHE L+LTLEKR  + H+  F++EF  ++Q   ML +    FY++      +VFL
Sbjct: 314 YRVGIVHEFLNLTLEKRASIHHIVEFKDEFSLTRQTYQMLKKQSMSFYLAGTEMNWTVFL 373

Query: 367 REAYRDSH-LIDKDRLLIIKEKL 385
           ++AY ++  L+ KD  ++  EKL
Sbjct: 374 KDAYDENGVLVSKDPQVVFNEKL 382

The following BLAST results are available for this feature:

BLAST of Spg007868 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900012.1	8.0e-243	90.54	protein WHAT'S THIS FACTOR 1 homolog, chloroplastic [Benincasa hispida]	[more]
XP_008461525.1	3.0e-242	89.44	PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo]	[more]
KAA0051010.1	6.8e-242	88.91	protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa] >TYK04397.1 prote...	[more]
XP_022156569.1	3.7e-240	88.53	protein ROOT PRIMORDIUM DEFECTIVE 1 [Momordica charantia]	[more]
KAG6592915.1	1.0e-237	88.15	Protein WHAT'S THIS FACTOR 1-like, chloroplastic, partial [Cucurbita argyrosperm...	[more]

BLAST of Spg007868 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0MFS5	7.4e-175	66.60	Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3...	[more]
Q65XL5	7.5e-159	66.30	Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japon...	[more]
B6TTV8	4.5e-156	65.05	Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=...	[more]
Q689D6	6.5e-38	32.19	Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1...	[more]
Q9ZUZ6	7.0e-24	28.44	Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=W...	[more]

BLAST of Spg007868 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CG79	1.5e-242	89.44	protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103500096 PE=4...	[more]
A0A5D3BY23	3.3e-242	88.91	Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A6J1DTV5	1.8e-240	88.53	protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Momordica charantia OX=3673 GN=LOC1110234...	[more]
A0A6J1H780	4.9e-238	88.15	protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC1114611...	[more]
A0A6J1KW65	1.1e-234	87.55	protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111498122...	[more]

BLAST of Spg007868 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G01037.1	5.3e-176	66.60	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT5G62990.1	3.3e-61	36.85	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT3G63090.1	4.6e-47	38.03	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT5G21970.1	1.6e-44	33.98	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT4G08940.1	2.8e-44	33.16	Ubiquitin carboxyl-terminal hydrolase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 226..246
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 403..417
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 422..455
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 395..462
IPR021099	Plant organelle RNA recognition domain	PFAM	PF11955	PORR	coord: 61..388 e-value: 6.7E-108 score: 360.5
IPR045040	PORR family	PANTHER	PTHR31476	PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC	coord: 24..445
IPR040293	Protein WHAT'S THIS FACTOR 1-like	PANTHER	PTHR31476:SF4	PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC	coord: 24..445

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg007868.1	Spg007868.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000373	Group II intron splicing
molecular_function	GO:0003723	RNA binding