Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAATTTCGAAAGGCGTGACGTTTGTGTGGCTGGTCACCATCTTCCTTTGCTTACTGTTCCTGAAAGTGGCGGACGCCGACACGGAGCACTTCGGCATCCACGCCGTCGGGCACGCGGTGGAGCCGTTCTGCCCCGGCGGGTACTCCGATAGGGGGGACCACTGCCAGTTCCTCGGCCACCTCGGACGCTCACTGGACGAAAACAGAGACGAGGACGACGATTTCGACGACACGTATAAAGTTACTCGGGACAAAGACAACAAGATTTCGATTTCGTTGACGTCGTTGGAATCCACGGAGGAAGCCGAGGAACGGGCGGTGGGTTTGGGGCTTGAGAACCTTACTCCTGAGGAACAGATTTCCGATAGAGTCACTGTCTTGGGCCATTGA
mRNA sequence
ATGGGAATTTCGAAAGGCGTGACGTTTGTGTGGCTGGTCACCATCTTCCTTTGCTTACTGTTCCTGAAAGTGGCGGACGCCGACACGGAGCACTTCGGCATCCACGCCGTCGGGCACGCGGTGGAGCCGTTCTGCCCCGGCGGGTACTCCGATAGGGGGGACCACTGCCAGTTCCTCGGCCACCTCGGACGCTCACTGGACGAAAACAGAGACGAGGACGACGATTTCGACGACACGTATAAAGTTACTCGGGACAAAGACAACAAGATTTCGATTTCGTTGACGTCGTTGGAATCCACGGAGGAAGCCGAGGAACGGGCGGTGGGTTTGGGGCTTGAGAACCTTACTCCTGAGGAACAGATTTCCGATAGAGTCACTGTCTTGGGCCATTGA
Coding sequence (CDS)
ATGGGAATTTCGAAAGGCGTGACGTTTGTGTGGCTGGTCACCATCTTCCTTTGCTTACTGTTCCTGAAAGTGGCGGACGCCGACACGGAGCACTTCGGCATCCACGCCGTCGGGCACGCGGTGGAGCCGTTCTGCCCCGGCGGGTACTCCGATAGGGGGGACCACTGCCAGTTCCTCGGCCACCTCGGACGCTCACTGGACGAAAACAGAGACGAGGACGACGATTTCGACGACACGTATAAAGTTACTCGGGACAAAGACAACAAGATTTCGATTTCGTTGACGTCGTTGGAATCCACGGAGGAAGCCGAGGAACGGGCGGTGGGTTTGGGGCTTGAGAACCTTACTCCTGAGGAACAGATTTCCGATAGAGTCACTGTCTTGGGCCATTGA
Protein sequence
MGISKGVTFVWLVTIFLCLLFLKVADADTEHFGIHAVGHAVEPFCPGGYSDRGDHCQFLGHLGRSLDENRDEDDDFDDTYKVTRDKDNKISISLTSLESTEEAEERAVGLGLENLTPEEQISDRVTVLGH
Homology
BLAST of Spg007791 vs. NCBI nr
Match:
KAG6572424.1 (hypothetical protein SDJN03_29152, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 147.1 bits (370), Expect = 1.0e-31
Identity = 71/118 (60.17%), Postives = 92/118 (77.97%), Query Frame = 0
Query: 13 VTIFLCLLFLKVADADTEHFGIHAVGHAVEPFCPGGYSDRGDHCQFLGHLGRSLDENRDE 72
+ IF+ LLF+K+A AD HFGIHA+GHAVEPFCPGGYSDRGDHC +G + D+
Sbjct: 4 LAIFISLLFIKLAHADPHHFGIHAIGHAVEPFCPGGYSDRGDHCNHIGRITSVNYGEDDD 63
Query: 73 DDDFDDTYKVTRDKDNKISISLTSLESTEEAEERAVGLGLENLTPEEQISDRVTVLGH 131
DDDFDDTYKV K+S++++ EST++AE+ AVGL LE+++PEEQ+SD+VTVLGH
Sbjct: 64 DDDFDDTYKVL----GKLSMAMSVSESTDDAEKEAVGLELEDISPEEQLSDKVTVLGH 117
BLAST of Spg007791 vs. NCBI nr
Match:
KAA0061659.1 (hypothetical protein E6C27_scaffold212G00280 [Cucumis melo var. makuwa])
HSP 1 Score: 131.3 bits (329), Expect = 5.9e-27
Identity = 73/132 (55.30%), Postives = 96/132 (72.73%), Query Frame = 0
Query: 1 MGISKGVTFVWLVTIFLCLLFLKVADADTEHFGIHAVGHAVEPFCPGGYSDRGDHCQFLG 60
MGISK ++FV ++ I L KVADAD++HFGIHAVGHAVEPFCPGGYSDRGDHCQ LG
Sbjct: 1 MGISKVLSFVCVIAI----LVSKVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHLG 60
Query: 61 HLGR-SLDENRDEDDD-FDDTYKVTRDKDNKISISLTSLESTEEAEERAVGLGLENLTPE 120
+ + +EN D+DDD FDD YKV K+S+S+ + +AE++A GL L ++P+
Sbjct: 61 RISSVNYNENDDDDDDEFDDRYKVV----GKLSVSV-----SPDAEDQADGLELGTISPD 119
Query: 121 EQISDRVTVLGH 131
+Q+S+ V VLGH
Sbjct: 121 QQLSNNVIVLGH 119
BLAST of Spg007791 vs. NCBI nr
Match:
KAE8647343.1 (hypothetical protein Csa_003811 [Cucumis sativus])
HSP 1 Score: 129.8 bits (325), Expect = 1.7e-26
Identity = 70/115 (60.87%), Postives = 82/115 (71.30%), Query Frame = 0
Query: 1 MGISKGVTFVWLVTIFLCLLFLKVADADTEHFGIHAVGHAVEPFCPGGYSDRGDHCQFLG 60
MGISKG++FV ++ I +C KVADAD +HFGIHAVGHAVEPFCPGGYSDRGDHCQ LG
Sbjct: 4 MGISKGLSFVCVIAILIC----KVADADADHFGIHAVGHAVEPFCPGGYSDRGDHCQHLG 63
Query: 61 HLGRSLDENRDEDDDFDDTYKVTRDKDNKISISLTSLESTEEAEERAVGLGLENL 116
+ D+DD+FDDTYKV K+S SL S E AE+RA GL LE+L
Sbjct: 64 RISSVNYNENDDDDEFDDTYKVV----GKLSASL----SPEAAEDRADGLELESL 106
BLAST of Spg007791 vs. NCBI nr
Match:
KAG6589281.1 (hypothetical protein SDJN03_17846, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 107.1 bits (266), Expect = 1.2e-19
Identity = 65/130 (50.00%), Postives = 84/130 (64.62%), Query Frame = 0
Query: 1 MGISKGVTFVWLVTIFLCLLFLKVADADTEHFGIHAVGHAVEPFCPGGYSDRGDHCQFLG 60
M ISKG++F+ LV IF+CLLF++VADA + H G HAVE CPGG G+HC
Sbjct: 1 MPISKGLSFLGLVAIFICLLFIEVADAHSGHSGT----HAVEKPCPGG----GEHCH--- 60
Query: 61 HLGRSLDENRDEDDDFDDTYKVTRDKDNKISISLTSLESTEEAEERAVGLGLENLTPEEQ 120
H GR + DEDDDFDDTYK K ++++ ESTE+AEERAV + +E +PEE
Sbjct: 61 HSGRMAAQTVDEDDDFDDTYKA----PVKGRMAMSMSESTEDAEERAVEMEIETTSPEEP 115
Query: 121 ISDRVTVLGH 131
+ +V VLGH
Sbjct: 121 ANQKVVVLGH 115
BLAST of Spg007791 vs. NCBI nr
Match:
KAE8075603.1 (hypothetical protein FH972_014299 [Carpinus fangiana])
HSP 1 Score: 59.3 bits (142), Expect = 2.8e-05
Identity = 47/136 (34.56%), Postives = 70/136 (51.47%), Query Frame = 0
Query: 1 MGISKGVTFVWLVTIFLCLLFLKVADAD--TEHFGIHAVGHAVEPFCPGGYSDRGDHCQF 60
M IS+GV L+T+F+CLL +K ++AD E+ IHAV H + C G +++ GDHC
Sbjct: 1 MTISRGVVLFGLMTLFVCLLLIKASEADDSAEYPPIHAVKHD-DSKCEGIHNEEGDHC-- 60
Query: 61 LGHLGRSLDENRDE----DDDFDDTYKVTRDKDNKISISLTSLESTEEAEERAVGLGLEN 120
R +E +E DDD DD+YKV N++++S S +
Sbjct: 61 -----REEEEEEEEEEVLDDDVDDSYKVV----NRMALSYHEAGSVNPFYD--------- 114
Query: 121 LTPEEQISDRVTVLGH 131
+ E + +RV VLGH
Sbjct: 121 -SDTELLDNRVVVLGH 114
BLAST of Spg007791 vs. ExPASy TrEMBL
Match:
A0A0A0KE60 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G421690 PE=4 SV=1)
HSP 1 Score: 137.5 bits (345), Expect = 4.0e-29
Identity = 74/130 (56.92%), Postives = 90/130 (69.23%), Query Frame = 0
Query: 1 MGISKGVTFVWLVTIFLCLLFLKVADADTEHFGIHAVGHAVEPFCPGGYSDRGDHCQFLG 60
MGISKG++FV ++ I +C KVADAD +HFGIHAVGHAVEPFCPGGYSDRGDHCQ LG
Sbjct: 4 MGISKGLSFVCVIAILIC----KVADADADHFGIHAVGHAVEPFCPGGYSDRGDHCQHLG 63
Query: 61 HLGRSLDENRDEDDDFDDTYKVTRDKDNKISISLTSLESTEEAEERAVGLGLENLTPEEQ 120
+ D+DD+FDDTYKV K+S SL S E AE+RA GL L +P ++
Sbjct: 64 RISSVNYNENDDDDEFDDTYKVV----GKLSASL----SPEAAEDRADGLELGIFSPHDR 121
Query: 121 ISDRVTVLGH 131
+S + VLGH
Sbjct: 124 LSVKEIVLGH 121
BLAST of Spg007791 vs. ExPASy TrEMBL
Match:
A0A5A7V7L4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold212G00280 PE=4 SV=1)
HSP 1 Score: 131.3 bits (329), Expect = 2.8e-27
Identity = 73/132 (55.30%), Postives = 96/132 (72.73%), Query Frame = 0
Query: 1 MGISKGVTFVWLVTIFLCLLFLKVADADTEHFGIHAVGHAVEPFCPGGYSDRGDHCQFLG 60
MGISK ++FV ++ I L KVADAD++HFGIHAVGHAVEPFCPGGYSDRGDHCQ LG
Sbjct: 1 MGISKVLSFVCVIAI----LVSKVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHLG 60
Query: 61 HLGR-SLDENRDEDDD-FDDTYKVTRDKDNKISISLTSLESTEEAEERAVGLGLENLTPE 120
+ + +EN D+DDD FDD YKV K+S+S+ + +AE++A GL L ++P+
Sbjct: 61 RISSVNYNENDDDDDDEFDDRYKVV----GKLSVSV-----SPDAEDQADGLELGTISPD 119
Query: 121 EQISDRVTVLGH 131
+Q+S+ V VLGH
Sbjct: 121 QQLSNNVIVLGH 119
BLAST of Spg007791 vs. ExPASy TrEMBL
Match:
A0A2N9FLD3 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15974 PE=4 SV=1)
HSP 1 Score: 61.6 bits (148), Expect = 2.8e-06
Identity = 44/132 (33.33%), Postives = 68/132 (51.52%), Query Frame = 0
Query: 1 MGISKGVTFVWLVTIFLCLLFLKVADAD-TEHFG-IHAVGHAVEPFCPGGYSDRGDHCQF 60
M IS+ V L T+ +CLL +KV++AD ++H+ IH + H C G + + GD C+
Sbjct: 1 MAISRSVLLFGLGTLLVCLLLIKVSEADESDHYAPIHVIKHD-GIHCDGAHPNNGDQCR- 60
Query: 61 LGHLGRSLDENRDEDDDFDDTYKVTRDKDNKISISLTSLESTEEAEERAVGLGLENLTPE 120
D+N + DDD DDTYKV S S S+E+ E + + E
Sbjct: 61 -----NDDDDNEEVDDDVDDTYKVVNKMSVSFSASTGQSSSSEDPSES------DATSTE 119
Query: 121 EQISDRVTVLGH 131
E++++ + VLGH
Sbjct: 121 EELNNHMIVLGH 119
BLAST of Spg007791 vs. ExPASy TrEMBL
Match:
A0A5N6R9F8 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_014299 PE=4 SV=1)
HSP 1 Score: 59.3 bits (142), Expect = 1.4e-05
Identity = 47/136 (34.56%), Postives = 70/136 (51.47%), Query Frame = 0
Query: 1 MGISKGVTFVWLVTIFLCLLFLKVADAD--TEHFGIHAVGHAVEPFCPGGYSDRGDHCQF 60
M IS+GV L+T+F+CLL +K ++AD E+ IHAV H + C G +++ GDHC
Sbjct: 1 MTISRGVVLFGLMTLFVCLLLIKASEADDSAEYPPIHAVKHD-DSKCEGIHNEEGDHC-- 60
Query: 61 LGHLGRSLDENRDE----DDDFDDTYKVTRDKDNKISISLTSLESTEEAEERAVGLGLEN 120
R +E +E DDD DD+YKV N++++S S +
Sbjct: 61 -----REEEEEEEEEEVLDDDVDDSYKVV----NRMALSYHEAGSVNPFYD--------- 114
Query: 121 LTPEEQISDRVTVLGH 131
+ E + +RV VLGH
Sbjct: 121 -SDTELLDNRVVVLGH 114
BLAST of Spg007791 vs. ExPASy TrEMBL
Match:
A0A7N2MB50 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)
HSP 1 Score: 58.5 bits (140), Expect = 2.3e-05
Identity = 45/134 (33.58%), Postives = 68/134 (50.75%), Query Frame = 0
Query: 1 MGISKGVTFVWLVTIFLCLLFLKVA---DADTEHFGIHAVGHAVEPFCPGGYSDRGDHCQ 60
M S+ + L + +CLL +KV D++ + IHAV H + C GG ++ GD C+
Sbjct: 1 MAPSRMTVLLGLGALMVCLLLMKVTEANDSEPNYAPIHAVRHDGK-HCDGGQANNGDQCR 60
Query: 61 FLGHLGRSLDENRDEDDDFDDTYKVTRDKDNKISISLTSLESTEEAEERAVGLGLENLTP 120
++N D DDD DDTYKV NK+S+S T+ + G ++ L P
Sbjct: 61 ------EDDNKNVDVDDDVDDTYKVV----NKMSVSFTT----------SAGQSMDPLDP 113
Query: 121 E-EQISDRVTVLGH 131
+ + + VTVLGH
Sbjct: 121 SFDDLENHVTVLGH 113
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG6572424.1 | 1.0e-31 | 60.17 | hypothetical protein SDJN03_29152, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAA0061659.1 | 5.9e-27 | 55.30 | hypothetical protein E6C27_scaffold212G00280 [Cucumis melo var. makuwa] | [more] |
KAE8647343.1 | 1.7e-26 | 60.87 | hypothetical protein Csa_003811 [Cucumis sativus] | [more] |
KAG6589281.1 | 1.2e-19 | 50.00 | hypothetical protein SDJN03_17846, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAE8075603.1 | 2.8e-05 | 34.56 | hypothetical protein FH972_014299 [Carpinus fangiana] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0KE60 | 4.0e-29 | 56.92 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G421690 PE=4 SV=1 | [more] |
A0A5A7V7L4 | 2.8e-27 | 55.30 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A2N9FLD3 | 2.8e-06 | 33.33 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15974 PE=4 SV=1 | [more] |
A0A5N6R9F8 | 1.4e-05 | 34.56 | Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_014299 PE=4 SV=1 | [more] |
A0A7N2MB50 | 2.3e-05 | 33.58 | Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |