Spg007682 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg007682
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	LOB domain-containing protein
Location	scaffold2: 981291 .. 981860 (+)
RNA-Seq Expression	Spg007682
Synteny	Spg007682

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATCATCAAGTTCTTACAACTCTCCATGTGCTGCTTGCAAGTTCTTGAGAAGAAAATGCATGCCAGGTTGCATTTTTGCTCCTTATTTCCCACCAGAAGAGCCTCAAAAGTTTGCCAATGTGCACAAGATCTTTGGGGCAAGCAATGTGACAAAGCTGCTGAATGAGCTTTTGCCTCACCAAAGAGAGGATGCAGTCAACTCTCTAGCCTACGAGGCCGAGGCCCGAGTCCGAGACCCGGTCTACGGTTGCGTCGGAGCCATCTCGTTCCTCCAAAGGCAAGTCCAGAGGCTCCAGAAGGAACTCGATGCTGCGAATGCCGACCTTATTCGGTATGCATGCAACGAGATCCCTAACGCCGGGGTAAGTCAAGTGGTTCAGCCAATAACCAGCCTTCGCCCGAGGGCTTTGGATCAGTATAATACAAGAGTTCTTGGCAATGAAGGTTCATCAAGTGGATATTTTAACCAACACCTTCCTGCCTTCCCCATGGCTTATCCACTCCCTTGGAATGAACACTCTTCTGGAAATAACATCAATGAAGGAGGAGGGGATGCCAATATTTGA

mRNA sequence

ATGGCATCATCAAGTTCTTACAACTCTCCATGTGCTGCTTGCAAGTTCTTGAGAAGAAAATGCATGCCAGGTTGCATTTTTGCTCCTTATTTCCCACCAGAAGAGCCTCAAAAGTTTGCCAATGTGCACAAGATCTTTGGGGCAAGCAATGTGACAAAGCTGCTGAATGAGCTTTTGCCTCACCAAAGAGAGGATGCAGTCAACTCTCTAGCCTACGAGGCCGAGGCCCGAGTCCGAGACCCGGTCTACGGTTGCGTCGGAGCCATCTCGTTCCTCCAAAGGCAAGTCCAGAGGCTCCAGAAGGAACTCGATGCTGCGAATGCCGACCTTATTCGGTATGCATGCAACGAGATCCCTAACGCCGGGGTAAGTCAAGTGGTTCAGCCAATAACCAGCCTTCGCCCGAGGGCTTTGGATCAGTATAATACAAGAGTTCTTGGCAATGAAGGTTCATCAAGTGGATATTTTAACCAACACCTTCCTGCCTTCCCCATGGCTTATCCACTCCCTTGGAATGAACACTCTTCTGGAAATAACATCAATGAAGGAGGAGGGGATGCCAATATTTGA

Coding sequence (CDS)

ATGGCATCATCAAGTTCTTACAACTCTCCATGTGCTGCTTGCAAGTTCTTGAGAAGAAAATGCATGCCAGGTTGCATTTTTGCTCCTTATTTCCCACCAGAAGAGCCTCAAAAGTTTGCCAATGTGCACAAGATCTTTGGGGCAAGCAATGTGACAAAGCTGCTGAATGAGCTTTTGCCTCACCAAAGAGAGGATGCAGTCAACTCTCTAGCCTACGAGGCCGAGGCCCGAGTCCGAGACCCGGTCTACGGTTGCGTCGGAGCCATCTCGTTCCTCCAAAGGCAAGTCCAGAGGCTCCAGAAGGAACTCGATGCTGCGAATGCCGACCTTATTCGGTATGCATGCAACGAGATCCCTAACGCCGGGGTAAGTCAAGTGGTTCAGCCAATAACCAGCCTTCGCCCGAGGGCTTTGGATCAGTATAATACAAGAGTTCTTGGCAATGAAGGTTCATCAAGTGGATATTTTAACCAACACCTTCCTGCCTTCCCCATGGCTTATCCACTCCCTTGGAATGAACACTCTTCTGGAAATAACATCAATGAAGGAGGAGGGGATGCCAATATTTGA

Protein sequence

MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPNAGVSQVVQPITSLRPRALDQYNTRVLGNEGSSSGYFNQHLPAFPMAYPLPWNEHSSGNNINEGGGDANI

Homology

[Close]

BLAST of Spg007682 vs. NCBI nr
Match: XP_023530763.1 (protein LATERAL ORGAN BOUNDARIES-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 357.5 bits (916), Expect = 7.3e-95
Identity = 169/189 (89.42%), Postives = 176/189 (93.12%), Query Frame = 0


Query: 1   MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60
           MASSS YNSPCAACKFLRRKCMP CIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP
Sbjct: 108 MASSSCYNSPCAACKFLRRKCMPDCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 167

Query: 61  HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPN 120
           HQREDAVNSLAYEAEARVRDPVYGC+GAISFLQRQ+ RLQKELDAAN DLIRYACNEIP+
Sbjct: 168 HQREDAVNSLAYEAEARVRDPVYGCIGAISFLQRQIHRLQKELDAANVDLIRYACNEIPD 227

Query: 121 AGVSQVVQPITSLRPRALDQYNTRVLGNEGSSSGYFNQHLPAFPMAYPLPWNEHSSGNNI 180
            G S VVQPI  LRPRALDQY+TR+LGNEGSSSGY+NQH PAFPM YPLPWNE+SSGNNI
Sbjct: 228 GGASHVVQPIPDLRPRALDQYHTRILGNEGSSSGYYNQHPPAFPMGYPLPWNENSSGNNI 287

Query: 181 NEGGGDANI 190
           NEGG D NI
Sbjct: 288 NEGGRDDNI 296

[Close]

BLAST of Spg007682 vs. NCBI nr
Match: KAG6587450.1 (Protein LATERAL ORGAN BOUNDARIES, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 357.5 bits (916), Expect = 7.3e-95
Identity = 169/189 (89.42%), Postives = 176/189 (93.12%), Query Frame = 0


Query: 1   MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60
           MASSS YNSPCAACKFLRRKCMP CIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP
Sbjct: 16  MASSSCYNSPCAACKFLRRKCMPDCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 75

Query: 61  HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPN 120
           HQREDAVNSLAYEAEARVRDPVYGC+GAISFLQRQ+ RLQKELDAAN DLIRYACNEIP+
Sbjct: 76  HQREDAVNSLAYEAEARVRDPVYGCIGAISFLQRQIHRLQKELDAANVDLIRYACNEIPD 135

Query: 121 AGVSQVVQPITSLRPRALDQYNTRVLGNEGSSSGYFNQHLPAFPMAYPLPWNEHSSGNNI 180
            G S VVQPI  LRPRALDQY+TR+LGNEGSSSGY+NQH PAFPM YPLPWNE+SSGNNI
Sbjct: 136 GGASHVVQPIPDLRPRALDQYHTRILGNEGSSSGYYNQHPPAFPMGYPLPWNENSSGNNI 195

Query: 181 NEGGGDANI 190
           NEGG D NI
Sbjct: 196 NEGGRDDNI 204

[Close]

BLAST of Spg007682 vs. NCBI nr
Match: XP_023530764.1 (protein LATERAL ORGAN BOUNDARIES-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 357.5 bits (916), Expect = 7.3e-95
Identity = 169/189 (89.42%), Postives = 176/189 (93.12%), Query Frame = 0


Query: 1   MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60
           MASSS YNSPCAACKFLRRKCMP CIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP
Sbjct: 1   MASSSCYNSPCAACKFLRRKCMPDCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60

Query: 61  HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPN 120
           HQREDAVNSLAYEAEARVRDPVYGC+GAISFLQRQ+ RLQKELDAAN DLIRYACNEIP+
Sbjct: 61  HQREDAVNSLAYEAEARVRDPVYGCIGAISFLQRQIHRLQKELDAANVDLIRYACNEIPD 120

Query: 121 AGVSQVVQPITSLRPRALDQYNTRVLGNEGSSSGYFNQHLPAFPMAYPLPWNEHSSGNNI 180
            G S VVQPI  LRPRALDQY+TR+LGNEGSSSGY+NQH PAFPM YPLPWNE+SSGNNI
Sbjct: 121 GGASHVVQPIPDLRPRALDQYHTRILGNEGSSSGYYNQHPPAFPMGYPLPWNENSSGNNI 180

Query: 181 NEGGGDANI 190
           NEGG D NI
Sbjct: 181 NEGGRDDNI 189

[Close]

BLAST of Spg007682 vs. NCBI nr
Match: XP_022931903.1 (protein LATERAL ORGAN BOUNDARIES-like [Cucurbita moschata])

HSP 1 Score: 357.5 bits (916), Expect = 7.3e-95
Identity = 169/189 (89.42%), Postives = 176/189 (93.12%), Query Frame = 0


Query: 1   MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60
           MASSS YNSPCAACKFLRRKCMP CIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP
Sbjct: 108 MASSSCYNSPCAACKFLRRKCMPDCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 167

Query: 61  HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPN 120
           HQREDAVNSLAYEAEARVRDPVYGC+GAISFLQRQ+ RLQKELDAAN DLIRYACNEIP+
Sbjct: 168 HQREDAVNSLAYEAEARVRDPVYGCIGAISFLQRQIHRLQKELDAANVDLIRYACNEIPD 227

Query: 121 AGVSQVVQPITSLRPRALDQYNTRVLGNEGSSSGYFNQHLPAFPMAYPLPWNEHSSGNNI 180
            G S VVQPI  LRPRALDQY+TR+LGNEGSSSGY+NQH PAFPM YPLPWNE+SSGNNI
Sbjct: 228 GGASHVVQPIPDLRPRALDQYHTRILGNEGSSSGYYNQHPPAFPMGYPLPWNENSSGNNI 287

Query: 181 NEGGGDANI 190
           NEGG D NI
Sbjct: 288 NEGGRDDNI 296

[Close]

BLAST of Spg007682 vs. NCBI nr
Match: KAG7021433.1 (Protein LATERAL ORGAN BOUNDARIES, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 355.1 bits (910), Expect = 3.6e-94
Identity = 168/189 (88.89%), Postives = 175/189 (92.59%), Query Frame = 0


Query: 1   MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60
           MASSS YNSPCAACKFLRRKCMP CIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP
Sbjct: 16  MASSSCYNSPCAACKFLRRKCMPDCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 75

Query: 61  HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPN 120
           HQREDAVNSLAYEAEARVRDPVYGC+GAISFLQRQ+ RLQKELDAAN DLIRYACNEIP+
Sbjct: 76  HQREDAVNSLAYEAEARVRDPVYGCIGAISFLQRQIHRLQKELDAANVDLIRYACNEIPD 135

Query: 121 AGVSQVVQPITSLRPRALDQYNTRVLGNEGSSSGYFNQHLPAFPMAYPLPWNEHSSGNNI 180
            G S VVQPI  LRPRALDQY+TR+LGNEGSSSGY+NQH PAFPM YPLPWNE+SSG NI
Sbjct: 136 GGASHVVQPIPDLRPRALDQYHTRILGNEGSSSGYYNQHPPAFPMGYPLPWNENSSGTNI 195

Query: 181 NEGGGDANI 190
           NEGG D NI
Sbjct: 196 NEGGRDDNI 204

[Close]

BLAST of Spg007682 vs. ExPASy Swiss-Prot
Match: Q9FML4 (Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 6.3e-57
Identity = 108/134 (80.60%), Postives = 114/134 (85.07%), Query Frame = 0


Query: 2   ASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPH 61
           +SS+SYNSPCAACKFLRRKCMPGCIFAPYFPPEEP KFANVHKIFGASNVTKLLNELLPH
Sbjct: 3   SSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPH 62

Query: 62  QREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPNA 121
           QREDAVNSLAYEAEARVRDPVYGCVGAIS+LQRQV RLQKELDAANADL  Y  +     
Sbjct: 63  QREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSAAG 122

Query: 122 GVSQVVQPITSLRP 136
               VV  +   +P
Sbjct: 123 APGNVVDLVFQPQP 136

[Close]

BLAST of Spg007682 vs. ExPASy Swiss-Prot
Match: Q8L8Q3 (LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 SV=3)

HSP 1 Score: 189.5 bits (480), Expect = 3.5e-47
Identity = 88/111 (79.28%), Postives = 100/111 (90.09%), Query Frame = 0


Query: 4   SSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQR 63
           S+  NSPCAACKFLRRKC   C+FAPYFPPEEP KFANVH+IFGASNV+K+L+E+ PHQR
Sbjct: 33  SNYTNSPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQR 92

Query: 64  EDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYA 115
           EDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV RLQ+EL+  NADL+RYA
Sbjct: 93  EDAVNSLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLMRYA 143

[Close]

BLAST of Spg007682 vs. ExPASy Swiss-Prot
Match: O04479 (Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.6e-44
Identity = 83/111 (74.77%), Postives = 97/111 (87.39%), Query Frame = 0


Query: 3   SSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQ 62
           +SSS NSPCAACKFLRRKC P C+FAPYFPP++PQKFANVHK+FGASNVTKLLNEL P Q
Sbjct: 2   ASSSTNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQ 61

Query: 63  REDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRY 114
           REDAVNSLAYEA+ R+RDPVYGCVG IS LQ Q+++LQ +L  A ++L +Y
Sbjct: 62  REDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKY 112

[Close]

BLAST of Spg007682 vs. ExPASy Swiss-Prot
Match: Q32SG3 (LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.3e-41
Identity = 85/159 (53.46%), Postives = 108/159 (67.92%), Query Frame = 0


Query: 9   SPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVN 68
           SPCAACKFLRRKC P C+FAPYFPP+ PQKF +VH++FGASNVTKLLNEL P QREDAVN
Sbjct: 32  SPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPFQREDAVN 91

Query: 69  SLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPNA-----GV 128
           SLAYEA+ R+RDPVYGCVG IS LQ  +++LQ++L  A  +L +Y      +A     G 
Sbjct: 92  SLAYEADMRLRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQAAAAASASTAPTGP 151

Query: 129 SQVVQPITSLRPRALDQY----NTRVLGNEGSSSGYFNQ 159
             + + I +  P     +    ++  LG+ G S+  F Q
Sbjct: 152 QAMAEFIGNAMPNGAHNFINIGHSAALGSLGGSASVFGQ 190

[Close]

BLAST of Spg007682 vs. ExPASy Swiss-Prot
Match: A1YKY7 (Protein IAL1 OS=Zea mays OX=4577 PE=2 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.4e-40
Identity = 84/168 (50.00%), Postives = 110/168 (65.48%), Query Frame = 0


Query: 1   MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60
           +A      SPCAACKFLRRKC P C+FAPYFPP+ PQKF  VH++FGASNVTKL+NE+ P
Sbjct: 24  LAGVCGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVRVHRVFGASNVTKLMNEIHP 83

Query: 61  HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPN 120
            QREDA+NSLAYEA+ R+RDPVYGCVG IS LQ  +++LQ++L  A  +L +Y      +
Sbjct: 84  LQREDAMNSLAYEADMRIRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQAAAAAS 143

Query: 121 A-----GVSQVVQPITSLRPRA-----LDQYNTRVLGNEGSSSGYFNQ 159
           A     G   + + I S  P       ++  ++  LG+ G S+  F Q
Sbjct: 144 ASTAPTGPQAMAEFIGSAMPNGAAHNFINLGHSAALGSLGGSTAMFGQ 191

[Close]

BLAST of Spg007682 vs. ExPASy TrEMBL
Match: A0A6J1F030 (protein LATERAL ORGAN BOUNDARIES-like OS=Cucurbita moschata OX=3662 GN=LOC111438177 PE=3 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 3.5e-95
Identity = 169/189 (89.42%), Postives = 176/189 (93.12%), Query Frame = 0


Query: 1   MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60
           MASSS YNSPCAACKFLRRKCMP CIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP
Sbjct: 108 MASSSCYNSPCAACKFLRRKCMPDCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 167

Query: 61  HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPN 120
           HQREDAVNSLAYEAEARVRDPVYGC+GAISFLQRQ+ RLQKELDAAN DLIRYACNEIP+
Sbjct: 168 HQREDAVNSLAYEAEARVRDPVYGCIGAISFLQRQIHRLQKELDAANVDLIRYACNEIPD 227

Query: 121 AGVSQVVQPITSLRPRALDQYNTRVLGNEGSSSGYFNQHLPAFPMAYPLPWNEHSSGNNI 180
            G S VVQPI  LRPRALDQY+TR+LGNEGSSSGY+NQH PAFPM YPLPWNE+SSGNNI
Sbjct: 228 GGASHVVQPIPDLRPRALDQYHTRILGNEGSSSGYYNQHPPAFPMGYPLPWNENSSGNNI 287

Query: 181 NEGGGDANI 190
           NEGG D NI
Sbjct: 288 NEGGRDDNI 296

[Close]

BLAST of Spg007682 vs. ExPASy TrEMBL
Match: A0A6J1HSS4 (protein LATERAL ORGAN BOUNDARIES-like OS=Cucurbita maxima OX=3661 GN=LOC111465894 PE=3 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 5.1e-94
Identity = 168/189 (88.89%), Postives = 176/189 (93.12%), Query Frame = 0


Query: 1   MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60
           MASSS YNSPCAACKFLRRKCMP CIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP
Sbjct: 1   MASSSCYNSPCAACKFLRRKCMPDCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60

Query: 61  HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPN 120
           HQREDAVNSLAYEAEARVRDPVYGC+GAISFLQRQ+ RLQKELDAAN DLIRYA NEIP+
Sbjct: 61  HQREDAVNSLAYEAEARVRDPVYGCIGAISFLQRQIHRLQKELDAANVDLIRYAYNEIPD 120

Query: 121 AGVSQVVQPITSLRPRALDQYNTRVLGNEGSSSGYFNQHLPAFPMAYPLPWNEHSSGNNI 180
            G S VVQPI +LRPRALDQY+TR+LGNEGSSSGY+NQH PAFPM YPLPWNE+SSGNNI
Sbjct: 121 GGASHVVQPIPALRPRALDQYHTRILGNEGSSSGYYNQHPPAFPMGYPLPWNENSSGNNI 180

Query: 181 NEGGGDANI 190
           NEGG D NI
Sbjct: 181 NEGGRDDNI 189

[Close]

BLAST of Spg007682 vs. ExPASy TrEMBL
Match: A0A6J1E272 (LOB domain-containing protein 25-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430134 PE=3 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 1.8e-91
Identity = 168/189 (88.89%), Postives = 174/189 (92.06%), Query Frame = 0


Query: 1   MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60
           MASSSSYNSPCAACKFLRRKCM GCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP
Sbjct: 1   MASSSSYNSPCAACKFLRRKCMSGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60

Query: 61  HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPN 120
           HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPN
Sbjct: 61  HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPN 120

Query: 121 AGVSQVVQPITSLRPRALDQYNTRVLGNEGSSSGYFNQHLPAFPMAYPLPWNEHSSGNNI 180
           AGVS VVQP    RPRALDQ++T       SS+GY+NQHLPAFPMAYPLPWNE+S GN+I
Sbjct: 121 AGVSHVVQPSPGARPRALDQFHT------SSSTGYYNQHLPAFPMAYPLPWNENSPGNDI 180

Query: 181 NEGGGDANI 190
           NEGGGD NI
Sbjct: 181 NEGGGDGNI 183

[Close]

BLAST of Spg007682 vs. ExPASy TrEMBL
Match: A0A6J1E5J8 (protein LATERAL ORGAN BOUNDARIES-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430134 PE=3 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 1.8e-91
Identity = 168/189 (88.89%), Postives = 174/189 (92.06%), Query Frame = 0


Query: 1   MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60
           MASSSSYNSPCAACKFLRRKCM GCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP
Sbjct: 59  MASSSSYNSPCAACKFLRRKCMSGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 118

Query: 61  HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPN 120
           HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPN
Sbjct: 119 HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPN 178

Query: 121 AGVSQVVQPITSLRPRALDQYNTRVLGNEGSSSGYFNQHLPAFPMAYPLPWNEHSSGNNI 180
           AGVS VVQP    RPRALDQ++T       SS+GY+NQHLPAFPMAYPLPWNE+S GN+I
Sbjct: 179 AGVSHVVQPSPGARPRALDQFHT------SSSTGYYNQHLPAFPMAYPLPWNENSPGNDI 238

Query: 181 NEGGGDANI 190
           NEGGGD NI
Sbjct: 239 NEGGGDGNI 241

[Close]

BLAST of Spg007682 vs. ExPASy TrEMBL
Match: A0A6J1JDL4 (LOB domain-containing protein 25-like OS=Cucurbita maxima OX=3661 GN=LOC111485830 PE=3 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 2.4e-91
Identity = 168/189 (88.89%), Postives = 174/189 (92.06%), Query Frame = 0


Query: 1   MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60
           MASSSSYNSPCAACKFLRRKCM GCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP
Sbjct: 1   MASSSSYNSPCAACKFLRRKCMSGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60

Query: 61  HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPN 120
           HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPN
Sbjct: 61  HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPN 120

Query: 121 AGVSQVVQPITSLRPRALDQYNTRVLGNEGSSSGYFNQHLPAFPMAYPLPWNEHSSGNNI 180
           AGVS VVQP    RPRALDQY+T       SS+GY++QHLPAFPMAYPLPWNE+S GN+I
Sbjct: 121 AGVSHVVQPSPGARPRALDQYHT------SSSTGYYSQHLPAFPMAYPLPWNENSPGNDI 180

Query: 181 NEGGGDANI 190
           NEGGGD NI
Sbjct: 181 NEGGGDGNI 183

[Close]

BLAST of Spg007682 vs. TAIR 10
Match: AT5G63090.2 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 221.9 bits (564), Expect = 4.5e-58
Identity = 108/134 (80.60%), Postives = 114/134 (85.07%), Query Frame = 0


Query: 2   ASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPH 61
           +SS+SYNSPCAACKFLRRKCMPGCIFAPYFPPEEP KFANVHKIFGASNVTKLLNELLPH
Sbjct: 3   SSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPH 62

Query: 62  QREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPNA 121
           QREDAVNSLAYEAEARVRDPVYGCVGAIS+LQRQV RLQKELDAANADL  Y  +     
Sbjct: 63  QREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSAAG 122

Query: 122 GVSQVVQPITSLRP 136
               VV  +   +P
Sbjct: 123 APGNVVDLVFQPQP 136

[Close]

BLAST of Spg007682 vs. TAIR 10
Match: AT5G63090.3 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 221.9 bits (564), Expect = 4.5e-58
Identity = 108/134 (80.60%), Postives = 114/134 (85.07%), Query Frame = 0


Query: 2   ASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPH 61
           +SS+SYNSPCAACKFLRRKCMPGCIFAPYFPPEEP KFANVHKIFGASNVTKLLNELLPH
Sbjct: 3   SSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPH 62

Query: 62  QREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPNA 121
           QREDAVNSLAYEAEARVRDPVYGCVGAIS+LQRQV RLQKELDAANADL  Y  +     
Sbjct: 63  QREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSAAG 122

Query: 122 GVSQVVQPITSLRP 136
               VV  +   +P
Sbjct: 123 APGNVVDLVFQPQP 136

[Close]

BLAST of Spg007682 vs. TAIR 10
Match: AT5G63090.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 221.9 bits (564), Expect = 4.5e-58
Identity = 108/134 (80.60%), Postives = 114/134 (85.07%), Query Frame = 0


Query: 2   ASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPH 61
           +SS+SYNSPCAACKFLRRKCMPGCIFAPYFPPEEP KFANVHKIFGASNVTKLLNELLPH
Sbjct: 3   SSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPH 62

Query: 62  QREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPNA 121
           QREDAVNSLAYEAEARVRDPVYGCVGAIS+LQRQV RLQKELDAANADL  Y  +     
Sbjct: 63  QREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSAAG 122

Query: 122 GVSQVVQPITSLRP 136
               VV  +   +P
Sbjct: 123 APGNVVDLVFQPQP 136

[Close]

BLAST of Spg007682 vs. TAIR 10
Match: AT5G63090.4 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 221.9 bits (564), Expect = 4.5e-58
Identity = 108/134 (80.60%), Postives = 114/134 (85.07%), Query Frame = 0


Query: 2   ASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPH 61
           +SS+SYNSPCAACKFLRRKCMPGCIFAPYFPPEEP KFANVHKIFGASNVTKLLNELLPH
Sbjct: 3   SSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPH 62

Query: 62  QREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPNA 121
           QREDAVNSLAYEAEARVRDPVYGCVGAIS+LQRQV RLQKELDAANADL  Y  +     
Sbjct: 63  QREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSAAG 122

Query: 122 GVSQVVQPITSLRP 136
               VV  +   +P
Sbjct: 123 APGNVVDLVFQPQP 136

[Close]

BLAST of Spg007682 vs. TAIR 10
Match: AT3G27650.1 (LOB domain-containing protein 25 )

HSP 1 Score: 189.5 bits (480), Expect = 2.5e-48
Identity = 88/111 (79.28%), Postives = 100/111 (90.09%), Query Frame = 0


Query: 4   SSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQR 63
           S+  NSPCAACKFLRRKC   C+FAPYFPPEEP KFANVH+IFGASNV+K+L+E+ PHQR
Sbjct: 33  SNYTNSPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQR 92

Query: 64  EDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYA 115
           EDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV RLQ+EL+  NADL+RYA
Sbjct: 93  EDAVNSLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLMRYA 143

The following BLAST results are available for this feature:

BLAST of Spg007682 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023530763.1	7.3e-95	89.42	protein LATERAL ORGAN BOUNDARIES-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
KAG6587450.1	7.3e-95	89.42	Protein LATERAL ORGAN BOUNDARIES, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_023530764.1	7.3e-95	89.42	protein LATERAL ORGAN BOUNDARIES-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022931903.1	7.3e-95	89.42	protein LATERAL ORGAN BOUNDARIES-like [Cucurbita moschata]	[more]
KAG7021433.1	3.6e-94	88.89	Protein LATERAL ORGAN BOUNDARIES, partial [Cucurbita argyrosperma subsp. argyros...	[more]

BLAST of Spg007682 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FML4	6.3e-57	80.60	Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=...	[more]
Q8L8Q3	3.5e-47	79.28	LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 S...	[more]
O04479	1.6e-44	74.77	Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1	[more]
Q32SG3	1.3e-41	53.46	LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1	[more]
A1YKY7	1.4e-40	50.00	Protein IAL1 OS=Zea mays OX=4577 PE=2 SV=1	[more]

BLAST of Spg007682 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F030	3.5e-95	89.42	protein LATERAL ORGAN BOUNDARIES-like OS=Cucurbita moschata OX=3662 GN=LOC111438...	[more]
A0A6J1HSS4	5.1e-94	88.89	protein LATERAL ORGAN BOUNDARIES-like OS=Cucurbita maxima OX=3661 GN=LOC11146589...	[more]
A0A6J1E272	1.8e-91	88.89	LOB domain-containing protein 25-like isoform X2 OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1E5J8	1.8e-91	88.89	protein LATERAL ORGAN BOUNDARIES-like isoform X1 OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1JDL4	2.4e-91	88.89	LOB domain-containing protein 25-like OS=Cucurbita maxima OX=3661 GN=LOC11148583...	[more]

BLAST of Spg007682 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G63090.2	4.5e-58	80.60	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.3	4.5e-58	80.60	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.1	4.5e-58	80.60	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.4	4.5e-58	80.60	Lateral organ boundaries (LOB) domain family protein	[more]
AT3G27650.1	2.5e-48	79.28	LOB domain-containing protein 25	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 89..116
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 1..186
None	No IPR available	PANTHER	PTHR31301:SF82	ELONGATED PETIOLULE 1	coord: 1..186
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 10..107 e-value: 2.9E-42 score: 143.3
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 9..110 score: 27.852367

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg007682.1	Spg007682.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane