Spg007656 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg007656
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Pentatricopeptide repeat-containing protein
Location	scaffold2: 60334 .. 67774 (-)
RNA-Seq Expression	Spg007656
Synteny	Spg007656

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTAGTTTGAGCTGGGTTACTTCCGTTCCTCTGCTTGCTGTCTTCCTGACCACAACTGATGCAGTATTGCGGGAAAGGAGTCAACACACAGAACGAATTTCGGGTACGATTTCGTGACTTCGCTCTTTTACAAATTTTGAACTCGATATTTTACGGGTTTGTTTGATTCTATTTCTTTATTAGTTGTCGTTCTTTCTGATCAGCCAATTTCTCCGTGTTATGATTGACCCCTATTCCATTGGCAATTTTATCACCGACTTACATGTTTCTGGGCATTTTAACTGGTTTTTGTCCTTGTCTGGATAGATATTTAGAGATCCCTGTTTAAAAGGATTGATTAGCACAGTTATGCACAAGTTCTTGATCTTGATTGAATTCTCGTTGCGGAATAAGAGTGGTAAGGTAGGAAACAGCTCCATATATTTGAATAGACAATCAAGAAAATAATAGAATTTCACCAGATGGTCTGGCAACTGTGGCGCAAACTGGCCTTGATGCCCAAGCCTCTATCTTTGCCTAATTTTCTTCTTATTTTGTCAAGGCATACGCCATATTCACTGTCCTGATTATTGGTCTCCTTAACGAGGAGACTGTTGAATGGTATCAAGTAGCAAGTTTTTAACCGCAAATGACCTCAGTTGATGCATGATAGAAGAAATAATATGACTAGTGTTTTAGGGATCATCTGAAACATATGGATTTTTTTAAGCTCGGTAGCTTTTTGGAATATATAGATTCTTGGTGCTGCTAACCAATAAAAAAATGTCAGGATTGTAGAATGTAACCCCTCGCTTAAAAATTATGGCACTTTGGATTAATCAAGTTTAAATTTTAGTTTGCAAATATCGGAATTTAAATTTAGCCTTTAAAGTCAATTGGAATATTATTTTTTTTCCCTTATTCTTTTTATGCGTTGTTGCAGGATTAGTGAGGCGTTTTTTCTGCATAGTGGGTAGTTATTTGGATTTATGAGAATTAAGTTCATTTAAAAGAAAAGAAAAGGTAGGAAAAAAAAACCCCTAAACTATTCCTTCTTCCCTCTTATTGTTTGCATGGAGTAGATTACCCACTCTTGTTCGACCTTAGAATTGAGCATTAGATTTATCTCTTGTCTTTCTAGCGCTGTGCAGTGCTGTTTGGACTCGAAATCGCTCTAATCTTGTGACCCATTCTCTGTTTGGCGTTAAACTAGAGCATCCACTGCCTAAGGACTCTAGACAAGTGGTTTCGAATCACTTAGGTTGTTGGACAGCACGTGTTTGGGCCTATTTGGATACTAAACGGTAAATTCCAGCACCCTTCACTTTCCTTTATTAAGTCTTCTAAGTGTTGGAAGTCGGTTCCTAACCTTTGGAAAGTCTTTAATTGTAGTTTGGTTCTTTTAGGTTCTTTCGGTTGAGAATCAAGTGGTTTCTGTAAGAAATATTTTCCCTAAAGCATTCTTTAGTTTTAAATTTGATTCTTAGGCGTGGTTTGACTCATAGCGATTATCTTGTTATTTAGGAGCTTTGTGGTTGTTTTGGATTGCTTAAGAGTGCAATAGGTAAGTAGTTTCTACTTGGATGAGTCTGTTTGTTTGTTTAAGCATGCTGTTTGTTTTACTTGCTTTATTATTATATGTTGTGTTTGATATAAATGTAATTCGTTACGTGAAATGAGCATGTCGCTTTGTTTATTTCCATAAGCATGTGATATTGTTGTTAGTTGGCTATGTTGCATGTGAGTCGTGTTTGCATAGTGTGTGTTCATTGGGGAGAGGCGGAGCATGACGCGTAAATCATGTGTTGGGTGTGTGTGCGGAGCGTGACGCGAAAATCACGTGTGAGTGGCGCTGCGCATGACGCGTAATTCATGTGTTGGGTGGGTTTGCGGAGCGTGACGCGGAAATCATGTGTGGGATGTGAGTGCGGATTGTGAAGCGAAAATCACGTGTGAGTGTGCGGGCATGGCGCGGAAACCATGTGGGGGTACATAGCATGATGCGTGGATTCATGTTGTCATCCTATTTTTGCATGAAACATGTGTCAGCATAATTTGTTTTCATGGTTAAGAGTATGTTGGTTGCTTTACTGCTTTCAAAGTATGAAGTTGTGTGAATAGCATGTTGACGTGGTTGTTTGCTGTGTGTGGCTCATCGGGTGTGAACTACTTACTAGTACGGTGGTTGTACTGATACCCTCTCCCTCTTTTCCCCCAACATTTTCAGATTATGTAGGTGAGCTTTATGTGCCCGGTGATGTGGAGGAGGAGGCTCACGAGAGATGACCATATGGTTTTATTTATTTGTTTATATTTTCCGTTGGTTGGGATAGCTCATTATTTGGTTTATGATTATGTTGATCCTAGACTTTGTTGTTAGGGTTGGAATAACCTTTAGTTGATGAGTTTGTTGTAGTTAACGCTTTCGTTAGGTTGTAAAGATGTTAAAGTTTAATAAAGTCGAGTTGTCCCTAGGGAGTTATGTGCTTGCTTATGCTTAATGAAGTTGTGGTTTTGTCATTGGTTGTGAAAAACGGGATTTGACTCGTATTGTGTGATGAAGTTGATATCTGGTATATTGAAGTAAGGTGGAGTAGTTGGGTATGATATAGAAGTGTGGTTTGGTGTTTAGTAGGTGTGTTAAAAATTTTGGTTTCATCCTATGTATGTTGTTATGTTGCCGAAATTTTCAGAGCTCTCGGTTAGTTTGAACATAGGAGTTTAGTAATGTCACTAGACTAGATAATAATAAAACCTGGGGCGTTACATAGAATCAACTACAACGTTTTATGTTTTTCCTGCCAAATGCTATAAGATGATCAAGTGTGCACTAAAACTAGCCCTTTGATGTCCATACAATTTTTTTTTAATATAAAAAAAGGACTTCCCGACCTAGCATCATCAAGCCATTGGTAAAGAAAATGAGCTGTGATGGTACCCTTTCTCTCCCCTTGCAAAACCAAACCCTTCGCTGCCATGAAGTCTCTGCTTAAGATAGTTATCAACGATGGAAACCATAGCGAAATGGGCAACCAAACACAATTTTTTCGTCTTAGATGTTGATTGAGAAGGTGGATATGGCTTCCCTTTAGAAGAAAGAGGAGTAGCTATGTACAACATCTACCTTGGGAAACTAGAACTACTTTGGCTCCATGATACACTCTCCAACATTCTCTTAGTCCCCCTTATTATAGTATATATGTGATGAATATAGGAGCTTATTCATCTTCTGTCTTTGTTGTAATTTTACTATTATTAGTTTAGGGTTTTCATATATGCCTATATATTTGGATCGCTTCATATTCTATCGACGAACTAAGAGTGATATCATTCTACTTGTCCTATATGTTGATGATATTGTTATCACTGGAAATGATACATCAAACATTTTATCTCCCAAAACTTTCTTCCAAAGTCAATTTCATACTAAAGACTTGGGAACAAAGAAAATATGTCCTTGATCTACTATCTGAGACGAGAAAGTTAGGAGCCAAGTCATGTAGTACTCTGGTGATGCCTAATCTGCAACTTACAAAAGATGAGGAACCATTTAAAGATCATGATAGATATAGAAGATTGATTGGAAAGTTGAATTATCATACAGTGACACGATCAGACATAGCTTCTCTACTAAGCATTGTGAGTCAATTAATGTCTTAATTCACTGTGGATCATTGGACTGCAGTACAAAAAATTCTATGTTATTTGAAGGTTGCACCTAGAGGGGATCTTATGTAAAGATATGGTCATAGATTGGGCAGGATTAAGAGAAGATGGAAGATCGACTTATAGCTATTGTATTTTTGTTGGAGGCAATTTGGTTTCATGGAAAAGTAAGAAACAAAATGTAGTTTTGTCGTCAAGTGTTGAATCAGAATACAGAGCTATGACACAATCAGTATGTGAAATAGTATGGGTATAACTCTTGATCGAATTAGGCTTCAATGTTACAGTTCCAACCAAGTTATGGTGTGACAATCAAATTGCCCTTCATATTGTCCAACCCAATATTTTATAAGTGGACTAAAATTTGAAATTGATTGTCATTTTGTTCGAGAGAAAATATAGCAAGGTTTGGTGTCTATTGGATATGTGAAGACCGGAGAGTAATTATGAGATATTTTCACGAAAGCCTTAAATGGAGTTTGAATCGATTACCTCTGGACATAATTAACATATATGCTCCACCATGATGGCCACCTACCTAGGATTTAATATCCTACGTGTTTCTTGACAACCAAATGTAGTAGGGTCAAACAATTGTCCCGTGAGATTAGTCGAAGTGTGCGCAAGCTGGTTCGGACGCTCACAGATATTAAAAAAATTGACATATATGCTCCATCTCGAAGAAGAGTGTTATAGTATATATGTGAATATAAGAGCTTATTAATCTTTTGTCCTTTATCGTAATTTTAGTATTATCAGTCTAGAACTTCTATGTATGTCTATGTTTGGCTCTACTCTATTGAAGAACAGATGGATTATCTCATTTTTGATTTCACAATAATAGATTTTGGAGTTGCTTCCACTATCAAGTAAGCCAAAAATTTTCGCATTTCCTTCTGAAACAGCCTTCTTGCTCCTATAGATCCTCAAGATCCATATGTTTATCAAAGTTTCCAATTTTCTTTCCTCCTTTTCTTTTTTTCCACCTCCTTTTCTATACTGTTTCCCGGTAAAGTATCTTTAGTCTTTGTTTTTTTGACATATTAGACTGTTTCAGGAAGAGAAGGCTGTTGAAAGAGGAATCCTTCCTTTGCTACAACGTGCTACCTTGGTTCAGACTTTTTGGACAACGAAATCATGTTTGCTTGAAGGAGGGATTAATTACAATTCATCCTTATGCTCCTCCTCAGAAAATGCACGCCCGCCTCATTCCTGAAAAAACTCCTAGGTCCATCTTTGTTTACTTTCGTGGACTATTCTATGATGTTGGAAATGATCCAGAAGGTGGTTATTACGCAAGGTATTTCAAAAAAGCTTACTTTTTAAAATGCATGTGCTTAGATATCCAAGTTCGTTGTAAACTTTTTTTTTTTTTATAATGAGAAACACGAAATTCTTCCTTTAATTGATGAGATGAAATTACAAAGGAAGGCAAACTATGCCAAAGGAATTACAAAAAACATTTCTATTTGACTATAAGAGAAGTTCATGGTTATCCAGAAGGCGTTTATTACGTAAGGTAGCTTATGTTTCTGTTGGGAAACATATTTTAAAACTTTTTTCTTTTTTAAAATTAAAAACAAAATTTTGATGTAAAAGGTCTTGTTTGGTAGGGAAATTTTTAAATACCGGTTTTTGAACAAACACTAGCAGAACATAAAATTGATGTTTTTCTATTTTCCTGTTTTTGTTAAATTTACGGGTACACATATAATCATTAATTACTTTTAAAATTTTTTAATTATGCCTTATATTTTATTAGGCTATATTTAAAATTGGGTAAAATATAATGTTGATCCCTAAAGTTGAGGATAAGTTTCTATCTGGTCCCTAAGTTTAAACAACCGACAGTTTAATCCCTAACGTTTGAGAAATGGTTCTAGAAGGTCCTTGAACCGTTAGTTGACTAACAGAAAGATAATTTATAGTTAACTTGCTTATTAGATGTGTTGACAAGATTTTTAAATTTTTACAATTTACATGAGATGCGGTTTTTCCTCTTCTATCTCCGTAATTAGTGAATTTGAGTGCCCTTTTCACCGGCCTATTAACTTTTTTCCTCATAAACTCTGTTTCAGATTTTCAAACCCTTTATCGTGTTCTTGAAGCCTGCAGACTCTCCTTGGATTCCAAAACTGCTATTGAAACGCATGCGAGAATTATTAAATTTGGATATGGAAACTACCCAACTCTCATCACCTCTCTTGTATCTACTTATCAACATGCTGGTTACCTTAATCGTGTCCATCAACTTCTTGATCTACTCTGCTCTAAGCATCTTGATTTAGTTGCAATGAACTTACTTATTGAAAATTTTATGAAAATCAGGGAAAGCAAACTTGCTGAAAAGGTATTTTATATAATGCCTTACCGTGATGTGGTAACATGGAACTCAATCATTGGAGGTTGTGTGAAGAATGCATGGTATGGCAAGGCATTTAAATTCTTTAGACAGATGCTGATCTCAAATATTCAGCCGGACGGATTTACATTTGCTTCTATATTGAATGCATGTGCCAAGCTCGGAGCTCTAAGTAATACTCAGTGGGTTCATGCTCTAATGACTCAGAAAAAAATTGAGCTTAATTCCATATTGATTTCTGCACTCATAGACGCGTACTCTAAGTGTGGTAGCATCCAAATTGCAAAGGAAATCTTTACTAGTGTCCCTCATAATGATATATCAGTTTGGAATGCGATGATCAAAGGGCTTGCAATTCACGGGCTTGCGATGGATGCATTATTGGTATTCTCGATGATGGAGCGTGAGAATGTTCTCCCCGATGCTGTCACCTTTTTGGGTATTTTAACAGCATGCAACCATGGTGGTGTAATTGAAGAGGGTCGCAGGTATTTTGATTGGATGAAAAGCCGTTATTCAATTCAGCCACAGCTTGAGCATTACGGAGTCATGGTTGATCTCTATAGCCGGGCTGGGTTTCTCGAAGAGGCCTATTCCATAATCATGTCAATGCCAATAGAGCCAGATGTTGTCACATGGAGGACGCTTCTCAGTGGTTGTAGAATTTACAGAAATCAAGAACTCGCAGAAGTTGCTATAGCGAACATGTCTCATCGTAAGAGTGGAGATTACGTGTTATTATCAAATATCTATTGTTCCCTCAATAGATGGGAGCATGCAGAAACAGTAAGAGAGATGATGAAAAACAAGGGAGTTCGTAAGATTTGTGGAAAAAGCTGGATTGAGTTGGCAGGTACCATTCAAAACTTCAAGTCAGGTGATCGATCACATCCAGAAATCGATGCAGTATACAAAGTGCTGGGCAGTTTGATGAAGAAAACTCGGGCAGAGGGTTATATGCCTGTCACAGAGTTGGTTTTCATGGATATCTCTGAGGAGGAAAAGGAAGAAAACCTATCATTTCATAGCGAAAAGTTGGCATTGGCTTATGCCATCCTGAAAACTAGTCCTGGGGTAAAAATCAATATATCAAAGAACCTACGGATCTGTGATGATTGTCATAGATGGATAAAACTAGTTTCAAAACTGCTCTGCAGAGTTATAGTAGTGAGGGATCGGATCCGGTTCCATCAATTTGAAGGTGGCATGTGTTCCTGTGGGGATTGTTGGTAGTTTGGTCCCAAGATTCCAAACTTTGTTTATTGGAACCTTTTTATAATGATGGAATTTATAACTACATCTGCAAGGGTCGCATGGATAATGCCAACCTCTCATTATCTTTCTTTTTGAAAATTATAATGGATGAGAAAGCTATATATTTGCAAATTTGTTGCCTGCAAACTTTTTCACTGTTATATCATTCTCTCTCTC

mRNA sequence

ATGAGTAGTTTGAGCTGGGTTACTTCCGTTCCTCTGCTTGCTGTCTTCCTGACCACAACTGATGCAGTATTGCGGGAAAGGAGTCAACACACAGAACGAATTTCGGGTACGATTTCAGATCCCTGTTTAAAAGGATTGATTAGCACAGTTATGCACAAGTTCTTGATCTTGATTGAATTCTCGTTGCGGAATAAGAGTGGTAAGGCATACGCCATATTCACTGTCCTGATTATTGGTCTCCTTAACGAGGAGACTGTTGAATGTGCTGTTTGGACTCGAAATCGCTCTAATCTTGTGACCCATTCTCTGTTTGGCGTTAAACTAGAGCATCCACTGCCTAAGGACTCTAGACAAGTGGTTTCGAATCACTTAGGTTGTTGGACAGCACGTGTTTGGGCCTATTTGGATACTAAACGAGCTCTCGACTGTTTCAGGAAGAGAAGGCTGTTGAAAGAGGAATCCTTCCTTTGCTACAACGTGCTACCTTGGTTCAGACTTTTTGGACAACGAAATCATGTTTGCTTGAAGGAGGGATTAATTACAATTCATCCTTATGCTCCTCCTCAGAAAATGCACGCCCGCCTCATTCCTGAAAAAACTCCTAGGTCCATCTTTGTTTACTTTCGTGGACTATTCTATGATGTTGGAAATGATCCAGAAGGTGGTTATTACGCAAGAAGGCGTTTATTACATTTTCAAACCCTTTATCGTGTTCTTGAAGCCTGCAGACTCTCCTTGGATTCCAAAACTGCTATTGAAACGCATGCGAGAATTATTAAATTTGGATATGGAAACTACCCAACTCTCATCACCTCTCTTGTATCTACTTATCAACATGCTGGTTACCTTAATCGTGTCCATCAACTTCTTGATCTACTCTGCTCTAAGCATCTTGATTTAGTTGCAATGAACTTACTTATTGAAAATTTTATGAAAATCAGGGAAAGCAAACTTGCTGAAAAGGTATTTTATATAATGCCTTACCGTGATGTGGTAACATGGAACTCAATCATTGGAGGTTGTGTGAAGAATGCATGGTATGGCAAGGCATTTAAATTCTTTAGACAGATGCTGATCTCAAATATTCAGCCGGACGGATTTACATTTGCTTCTATATTGAATGCATGTGCCAAGCTCGGAGCTCTAAGTAATACTCAGTGGGTTCATGCTCTAATGACTCAGAAAAAAATTGAGCTTAATTCCATATTGATTTCTGCACTCATAGACGCGTACTCTAAGTGTGGTAGCATCCAAATTGCAAAGGAAATCTTTACTAGTGTCCCTCATAATGATATATCAGTTTGGAATGCGATGATCAAAGGGCTTGCAATTCACGGGCTTGCGATGGATGCATTATTGGTATTCTCGATGATGGAGCGTGAGAATGTTCTCCCCGATGCTGTCACCTTTTTGGGTATTTTAACAGCATGCAACCATGGTGGTGTAATTGAAGAGGGTCGCAGGTATTTTGATTGGATGAAAAGCCGTTATTCAATTCAGCCACAGCTTGAGCATTACGGAGTCATGGTTGATCTCTATAGCCGGGCTGGGTTTCTCGAAGAGGCCTATTCCATAATCATGTCAATGCCAATAGAGCCAGATGTTGTCACATGGAGGACGCTTCTCAGTGGTTGTAGAATTTACAGAAATCAAGAACTCGCAGAAGTTGCTATAGCGAACATGTCTCATCGTAAGAGTGGAGATTACGTGTTATTATCAAATATCTATTGTTCCCTCAATAGATGGGAGCATGCAGAAACAGTAAGAGAGATGATGAAAAACAAGGGAGTTCGTAAGATTTGTGGAAAAAGCTGGATTGAGTTGGCAGGTACCATTCAAAACTTCAAGTCAGGTGATCGATCACATCCAGAAATCGATGCAGTATACAAAGTGCTGGGCAGTTTGATGAAGAAAACTCGGGCAGAGGGTTATATGCCTGTCACAGAGTTGGTTTTCATGGATATCTCTGAGGAGGAAAAGGAAGAAAACCTATCATTTCATAGCGAAAAGTTGGCATTGGCTTATGCCATCCTGAAAACTAGTCCTGGGGTAAAAATCAATATATCAAAGAACCTACGGATCTGTGATGATTGTCATAGATGGATAAAACTAGTTTCAAAACTGCTCTGCAGAGTTATAGTAGTGAGGGATCGGATCCGGTTCCATCAATTTGAAGGTGGCATGTGTTCCTGTGGGGATTGTTGGTAG

Coding sequence (CDS)

ATGAGTAGTTTGAGCTGGGTTACTTCCGTTCCTCTGCTTGCTGTCTTCCTGACCACAACTGATGCAGTATTGCGGGAAAGGAGTCAACACACAGAACGAATTTCGGGTACGATTTCAGATCCCTGTTTAAAAGGATTGATTAGCACAGTTATGCACAAGTTCTTGATCTTGATTGAATTCTCGTTGCGGAATAAGAGTGGTAAGGCATACGCCATATTCACTGTCCTGATTATTGGTCTCCTTAACGAGGAGACTGTTGAATGTGCTGTTTGGACTCGAAATCGCTCTAATCTTGTGACCCATTCTCTGTTTGGCGTTAAACTAGAGCATCCACTGCCTAAGGACTCTAGACAAGTGGTTTCGAATCACTTAGGTTGTTGGACAGCACGTGTTTGGGCCTATTTGGATACTAAACGAGCTCTCGACTGTTTCAGGAAGAGAAGGCTGTTGAAAGAGGAATCCTTCCTTTGCTACAACGTGCTACCTTGGTTCAGACTTTTTGGACAACGAAATCATGTTTGCTTGAAGGAGGGATTAATTACAATTCATCCTTATGCTCCTCCTCAGAAAATGCACGCCCGCCTCATTCCTGAAAAAACTCCTAGGTCCATCTTTGTTTACTTTCGTGGACTATTCTATGATGTTGGAAATGATCCAGAAGGTGGTTATTACGCAAGAAGGCGTTTATTACATTTTCAAACCCTTTATCGTGTTCTTGAAGCCTGCAGACTCTCCTTGGATTCCAAAACTGCTATTGAAACGCATGCGAGAATTATTAAATTTGGATATGGAAACTACCCAACTCTCATCACCTCTCTTGTATCTACTTATCAACATGCTGGTTACCTTAATCGTGTCCATCAACTTCTTGATCTACTCTGCTCTAAGCATCTTGATTTAGTTGCAATGAACTTACTTATTGAAAATTTTATGAAAATCAGGGAAAGCAAACTTGCTGAAAAGGTATTTTATATAATGCCTTACCGTGATGTGGTAACATGGAACTCAATCATTGGAGGTTGTGTGAAGAATGCATGGTATGGCAAGGCATTTAAATTCTTTAGACAGATGCTGATCTCAAATATTCAGCCGGACGGATTTACATTTGCTTCTATATTGAATGCATGTGCCAAGCTCGGAGCTCTAAGTAATACTCAGTGGGTTCATGCTCTAATGACTCAGAAAAAAATTGAGCTTAATTCCATATTGATTTCTGCACTCATAGACGCGTACTCTAAGTGTGGTAGCATCCAAATTGCAAAGGAAATCTTTACTAGTGTCCCTCATAATGATATATCAGTTTGGAATGCGATGATCAAAGGGCTTGCAATTCACGGGCTTGCGATGGATGCATTATTGGTATTCTCGATGATGGAGCGTGAGAATGTTCTCCCCGATGCTGTCACCTTTTTGGGTATTTTAACAGCATGCAACCATGGTGGTGTAATTGAAGAGGGTCGCAGGTATTTTGATTGGATGAAAAGCCGTTATTCAATTCAGCCACAGCTTGAGCATTACGGAGTCATGGTTGATCTCTATAGCCGGGCTGGGTTTCTCGAAGAGGCCTATTCCATAATCATGTCAATGCCAATAGAGCCAGATGTTGTCACATGGAGGACGCTTCTCAGTGGTTGTAGAATTTACAGAAATCAAGAACTCGCAGAAGTTGCTATAGCGAACATGTCTCATCGTAAGAGTGGAGATTACGTGTTATTATCAAATATCTATTGTTCCCTCAATAGATGGGAGCATGCAGAAACAGTAAGAGAGATGATGAAAAACAAGGGAGTTCGTAAGATTTGTGGAAAAAGCTGGATTGAGTTGGCAGGTACCATTCAAAACTTCAAGTCAGGTGATCGATCACATCCAGAAATCGATGCAGTATACAAAGTGCTGGGCAGTTTGATGAAGAAAACTCGGGCAGAGGGTTATATGCCTGTCACAGAGTTGGTTTTCATGGATATCTCTGAGGAGGAAAAGGAAGAAAACCTATCATTTCATAGCGAAAAGTTGGCATTGGCTTATGCCATCCTGAAAACTAGTCCTGGGGTAAAAATCAATATATCAAAGAACCTACGGATCTGTGATGATTGTCATAGATGGATAAAACTAGTTTCAAAACTGCTCTGCAGAGTTATAGTAGTGAGGGATCGGATCCGGTTCCATCAATTTGAAGGTGGCATGTGTTCCTGTGGGGATTGTTGGTAG

Protein sequence

MSSLSWVTSVPLLAVFLTTTDAVLRERSQHTERISGTISDPCLKGLISTVMHKFLILIEFSLRNKSGKAYAIFTVLIIGLLNEETVECAVWTRNRSNLVTHSLFGVKLEHPLPKDSRQVVSNHLGCWTARVWAYLDTKRALDCFRKRRLLKEESFLCYNVLPWFRLFGQRNHVCLKEGLITIHPYAPPQKMHARLIPEKTPRSIFVYFRGLFYDVGNDPEGGYYARRRLLHFQTLYRVLEACRLSLDSKTAIETHARIIKFGYGNYPTLITSLVSTYQHAGYLNRVHQLLDLLCSKHLDLVAMNLLIENFMKIRESKLAEKVFYIMPYRDVVTWNSIIGGCVKNAWYGKAFKFFRQMLISNIQPDGFTFASILNACAKLGALSNTQWVHALMTQKKIELNSILISALIDAYSKCGSIQIAKEIFTSVPHNDISVWNAMIKGLAIHGLAMDALLVFSMMERENVLPDAVTFLGILTACNHGGVIEEGRRYFDWMKSRYSIQPQLEHYGVMVDLYSRAGFLEEAYSIIMSMPIEPDVVTWRTLLSGCRIYRNQELAEVAIANMSHRKSGDYVLLSNIYCSLNRWEHAETVREMMKNKGVRKICGKSWIELAGTIQNFKSGDRSHPEIDAVYKVLGSLMKKTRAEGYMPVTELVFMDISEEEKEENLSFHSEKLALAYAILKTSPGVKINISKNLRICDDCHRWIKLVSKLLCRVIVVRDRIRFHQFEGGMCSCGDCW

Homology

[Close]

BLAST of Spg007656 vs. NCBI nr
Match: XP_038879432.1 (pentatricopeptide repeat-containing protein At5g50990 isoform X1 [Benincasa hispida])

HSP 1 Score: 896.0 bits (2314), Expect = 2.2e-256
Identity = 436/505 (86.34%), Postives = 468/505 (92.67%), Query Frame = 0


Query: 232 FQTLYRVLEACRL-SLDSKTAIETHARIIKFGYGNYPTLITSLVSTYQHAGYLNRVHQLL 291
           +QTL+RVLEACRL  L SKT IETHARIIKFGYG+YP LITSLVSTYQ AG LNRVHQLL
Sbjct: 35  YQTLFRVLEACRLVPLSSKTVIETHARIIKFGYGSYPALITSLVSTYQRAGCLNRVHQLL 94

Query: 292 DLLCSKHLDLVAMNLLIENFMKIRESKLAEKVFYIMPYRDVVTWNSIIGGCVKNAWYGKA 351
           DLLCSKHLDLV MNLLIENF K+ E K A +VFY MPYRDVVTWNSIIGGCVKNA Y +A
Sbjct: 95  DLLCSKHLDLVEMNLLIENFTKVGECKFANEVFYKMPYRDVVTWNSIIGGCVKNAHYDEA 154

Query: 352 FKFFRQMLISNIQPDGFTFASILNACAKLGALSNTQWVHALMTQKKIELNSILISALIDA 411
           F+FFRQML SNIQPDGFTFAS+LNACA+LG  SNTQWVHALMTQKKIELNSIL  ALIDA
Sbjct: 155 FRFFRQMLNSNIQPDGFTFASVLNACAQLGTPSNTQWVHALMTQKKIELNSILSCALIDA 214

Query: 412 YSKCGSIQIAKEIFTSVPHNDISVWNAMIKGLAIHGLAMDALLVFSMMERENVLPDAVTF 471
           YSKCGSIQIAKE+F+ VPH+D+SVWNAMIKGLAIHGLA DAL +F MMERENVLPDAVTF
Sbjct: 215 YSKCGSIQIAKEMFSCVPHSDVSVWNAMIKGLAIHGLATDALSLFLMMERENVLPDAVTF 274

Query: 472 LGILTACNHGGVIEEGRRYFDWMKSRYSIQPQLEHYGVMVDLYSRAGFLEEAYSIIMSMP 531
           LGILTACNHGG+I++GRRYF+WM+SRYSIQPQLEHYGV+VDLYSRAGFLEEAYS+I++MP
Sbjct: 275 LGILTACNHGGLIDQGRRYFEWMRSRYSIQPQLEHYGVLVDLYSRAGFLEEAYSLIVAMP 334

Query: 532 IEPDVVTWRTLLSGCRIYRNQELAEVAIANMSHRKSGDYVLLSNIYCSLNRWEHAETVRE 591
           IEPDVVTWRTLLSGCRIYRNQELAEVAI NMSHRKSGDYVLLSNIYCSLN+WEHA TVR+
Sbjct: 335 IEPDVVTWRTLLSGCRIYRNQELAEVAITNMSHRKSGDYVLLSNIYCSLNKWEHAATVRK 394

Query: 592 MMKNKGVRKICGKSWIELAGTIQNFKSGDRSHPEIDAVYKVLGSLMKKTRAEGYMPVTEL 651
           MMK  GVRK CGKSWIEL GTIQNFKSGDRSHPE DAVY+VL SLMK+TR+EGYMPVTEL
Sbjct: 395 MMKINGVRKKCGKSWIELGGTIQNFKSGDRSHPESDAVYRVLCSLMKRTRSEGYMPVTEL 454

Query: 652 VFMDISEEEKEENLSFHSEKLALAYAILKTSPGVKINISKNLRICDDCHRWIKLVSKLLC 711
           VFMDISEEEKEENLSFHSEK+ALAYAILKTSPG KI+ISKNLRICDDCH WIKLVS++LC
Sbjct: 455 VFMDISEEEKEENLSFHSEKVALAYAILKTSPGAKISISKNLRICDDCHTWIKLVSRVLC 514

Query: 712 RVIVVRDRIRFHQFEGGMCSCGDCW 736
           R IVVRDRIRFHQFEGGMCSCGD W
Sbjct: 515 RAIVVRDRIRFHQFEGGMCSCGDRW 539

[Close]

BLAST of Spg007656 vs. NCBI nr
Match: XP_022988253.1 (pentatricopeptide repeat-containing protein At5g50990 isoform X1 [Cucurbita maxima])

HSP 1 Score: 885.9 bits (2288), Expect = 2.3e-253
Identity = 433/505 (85.74%), Postives = 470/505 (93.07%), Query Frame = 0


Query: 232 FQTLYRVLEACRLS-LDSKTAIETHARIIKFGYGNYPTLITSLVSTYQHAGYLNRVHQLL 291
           +QTLYRVLEACRLS  +SKTA ETHAR+IKFGYGNYPTL+TSLVS YQ A  LNRVHQLL
Sbjct: 126 YQTLYRVLEACRLSPSNSKTASETHARMIKFGYGNYPTLVTSLVSAYQRADCLNRVHQLL 185

Query: 292 DLLCSKHLDLVAMNLLIENFMKIRESKLAEKVFYIMPYRDVVTWNSIIGGCVKNAWYGKA 351
           +LLCSKHLDLVAMNL I+NFMKI E KLA++VF  MPYRDVVTWNSIIGGCVKNA Y +A
Sbjct: 186 NLLCSKHLDLVAMNLFIDNFMKIGECKLAKRVFDKMPYRDVVTWNSIIGGCVKNARYEEA 245

Query: 352 FKFFRQMLISNIQPDGFTFASILNACAKLGALSNTQWVHALMTQKKIELNSILISALIDA 411
           FKFFRQML+SNIQPDGFTFAS+LNACA+LGA SNTQWVHALMTQKKI+LNSIL  ALIDA
Sbjct: 246 FKFFRQMLVSNIQPDGFTFASVLNACAQLGAPSNTQWVHALMTQKKIDLNSILSCALIDA 305

Query: 412 YSKCGSIQIAKEIFTSVPHNDISVWNAMIKGLAIHGLAMDALLVFSMMERENVLPDAVTF 471
           YSKCGSIQIAKEIF+SVP ++ISVWNAMIKGLAIHGL+MDAL VF MMERENVLPDAVTF
Sbjct: 306 YSKCGSIQIAKEIFSSVPRSNISVWNAMIKGLAIHGLSMDALSVFWMMERENVLPDAVTF 365

Query: 472 LGILTACNHGGVIEEGRRYFDWMKSRYSIQPQLEHYGVMVDLYSRAGFLEEAYSIIMSMP 531
           LGILTACNHGG+IE+GRR+FDWMK+RYSIQPQLEHYGVMVDLYSRAGFLEEAYSII++MP
Sbjct: 366 LGILTACNHGGLIEQGRRFFDWMKNRYSIQPQLEHYGVMVDLYSRAGFLEEAYSIIVAMP 425

Query: 532 IEPDVVTWRTLLSGCRIYRNQELAEVAIANMSHRKSGDYVLLSNIYCSLNRWEHAETVRE 591
           IE DVVTWR LLSGCRIYRNQELAEVAIANMSHR SGDYVLLSNIYCSLNRWEHAE VRE
Sbjct: 426 IEADVVTWRALLSGCRIYRNQELAEVAIANMSHRGSGDYVLLSNIYCSLNRWEHAERVRE 485

Query: 592 MMKNKGVRKICGKSWIELAGTIQNFKSGDRSHPEIDAVYKVLGSLMKKTRAEGYMPVTEL 651
            MK+ GVRK CGKSWIEL G+IQ+F+SGDRSHPE DAVYKV+  LMK++R+EGYMPVT+L
Sbjct: 486 RMKSNGVRKSCGKSWIELGGSIQSFRSGDRSHPESDAVYKVVWRLMKRSRSEGYMPVTDL 545

Query: 652 VFMDISEEEKEENLSFHSEKLALAYAILKTSPGVKINISKNLRICDDCHRWIKLVSKLLC 711
           V MDISEEEKEENLS+HSEKLALAYAILKTSPG KI+ISKNLR+CDDCHRWIK+VS LLC
Sbjct: 546 VLMDISEEEKEENLSYHSEKLALAYAILKTSPGAKISISKNLRMCDDCHRWIKIVSTLLC 605

Query: 712 RVIVVRDRIRFHQFEGGMCSCGDCW 736
           RV+VVRDRIRFHQFEGGMCSCGD W
Sbjct: 606 RVVVVRDRIRFHQFEGGMCSCGDRW 630

[Close]

BLAST of Spg007656 vs. NCBI nr
Match: XP_022988254.1 (pentatricopeptide repeat-containing protein At5g50990 isoform X2 [Cucurbita maxima])

HSP 1 Score: 885.9 bits (2288), Expect = 2.3e-253
Identity = 433/505 (85.74%), Postives = 470/505 (93.07%), Query Frame = 0


Query: 232 FQTLYRVLEACRLS-LDSKTAIETHARIIKFGYGNYPTLITSLVSTYQHAGYLNRVHQLL 291
           +QTLYRVLEACRLS  +SKTA ETHAR+IKFGYGNYPTL+TSLVS YQ A  LNRVHQLL
Sbjct: 124 YQTLYRVLEACRLSPSNSKTASETHARMIKFGYGNYPTLVTSLVSAYQRADCLNRVHQLL 183

Query: 292 DLLCSKHLDLVAMNLLIENFMKIRESKLAEKVFYIMPYRDVVTWNSIIGGCVKNAWYGKA 351
           +LLCSKHLDLVAMNL I+NFMKI E KLA++VF  MPYRDVVTWNSIIGGCVKNA Y +A
Sbjct: 184 NLLCSKHLDLVAMNLFIDNFMKIGECKLAKRVFDKMPYRDVVTWNSIIGGCVKNARYEEA 243

Query: 352 FKFFRQMLISNIQPDGFTFASILNACAKLGALSNTQWVHALMTQKKIELNSILISALIDA 411
           FKFFRQML+SNIQPDGFTFAS+LNACA+LGA SNTQWVHALMTQKKI+LNSIL  ALIDA
Sbjct: 244 FKFFRQMLVSNIQPDGFTFASVLNACAQLGAPSNTQWVHALMTQKKIDLNSILSCALIDA 303

Query: 412 YSKCGSIQIAKEIFTSVPHNDISVWNAMIKGLAIHGLAMDALLVFSMMERENVLPDAVTF 471
           YSKCGSIQIAKEIF+SVP ++ISVWNAMIKGLAIHGL+MDAL VF MMERENVLPDAVTF
Sbjct: 304 YSKCGSIQIAKEIFSSVPRSNISVWNAMIKGLAIHGLSMDALSVFWMMERENVLPDAVTF 363

Query: 472 LGILTACNHGGVIEEGRRYFDWMKSRYSIQPQLEHYGVMVDLYSRAGFLEEAYSIIMSMP 531
           LGILTACNHGG+IE+GRR+FDWMK+RYSIQPQLEHYGVMVDLYSRAGFLEEAYSII++MP
Sbjct: 364 LGILTACNHGGLIEQGRRFFDWMKNRYSIQPQLEHYGVMVDLYSRAGFLEEAYSIIVAMP 423

Query: 532 IEPDVVTWRTLLSGCRIYRNQELAEVAIANMSHRKSGDYVLLSNIYCSLNRWEHAETVRE 591
           IE DVVTWR LLSGCRIYRNQELAEVAIANMSHR SGDYVLLSNIYCSLNRWEHAE VRE
Sbjct: 424 IEADVVTWRALLSGCRIYRNQELAEVAIANMSHRGSGDYVLLSNIYCSLNRWEHAERVRE 483

Query: 592 MMKNKGVRKICGKSWIELAGTIQNFKSGDRSHPEIDAVYKVLGSLMKKTRAEGYMPVTEL 651
            MK+ GVRK CGKSWIEL G+IQ+F+SGDRSHPE DAVYKV+  LMK++R+EGYMPVT+L
Sbjct: 484 RMKSNGVRKSCGKSWIELGGSIQSFRSGDRSHPESDAVYKVVWRLMKRSRSEGYMPVTDL 543

Query: 652 VFMDISEEEKEENLSFHSEKLALAYAILKTSPGVKINISKNLRICDDCHRWIKLVSKLLC 711
           V MDISEEEKEENLS+HSEKLALAYAILKTSPG KI+ISKNLR+CDDCHRWIK+VS LLC
Sbjct: 544 VLMDISEEEKEENLSYHSEKLALAYAILKTSPGAKISISKNLRMCDDCHRWIKIVSTLLC 603

Query: 712 RVIVVRDRIRFHQFEGGMCSCGDCW 736
           RV+VVRDRIRFHQFEGGMCSCGD W
Sbjct: 604 RVVVVRDRIRFHQFEGGMCSCGDRW 628

[Close]

BLAST of Spg007656 vs. NCBI nr
Match: XP_022922012.1 (pentatricopeptide repeat-containing protein At5g50990 isoform X1 [Cucurbita moschata])

HSP 1 Score: 885.2 bits (2286), Expect = 3.9e-253
Identity = 435/505 (86.14%), Postives = 468/505 (92.67%), Query Frame = 0


Query: 232 FQTLYRVLEACRLS-LDSKTAIETHARIIKFGYGNYPTLITSLVSTYQHAGYLNRVHQLL 291
           +QTLYRVLEACRLS  +SKTA ETHAR+IKFGYGNYPTL+TSLVS YQ A  LNRVHQLL
Sbjct: 127 YQTLYRVLEACRLSPSNSKTASETHARMIKFGYGNYPTLVTSLVSAYQRADCLNRVHQLL 186

Query: 292 DLLCSKHLDLVAMNLLIENFMKIRESKLAEKVFYIMPYRDVVTWNSIIGGCVKNAWYGKA 351
           +LLCSKHLDLVAMNL I+NFMKI E KLA++VF  MPYRDVVTWNSIIGGCVKNA Y +A
Sbjct: 187 NLLCSKHLDLVAMNLFIDNFMKIGECKLAKRVFDKMPYRDVVTWNSIIGGCVKNARYEEA 246

Query: 352 FKFFRQMLISNIQPDGFTFASILNACAKLGALSNTQWVHALMTQKKIELNSILISALIDA 411
           FKFFRQML SNIQPDGFTFAS+LNACA+LGA SNTQWVHALMTQKKIELNSIL  ALIDA
Sbjct: 247 FKFFRQMLNSNIQPDGFTFASVLNACAQLGAPSNTQWVHALMTQKKIELNSILSCALIDA 306

Query: 412 YSKCGSIQIAKEIFTSVPHNDISVWNAMIKGLAIHGLAMDALLVFSMMERENVLPDAVTF 471
           YSKCGSIQIAKEIF+SVP ++ISVWNAMIKGLAIHGL+MDAL VF MMERENVLPDAVTF
Sbjct: 307 YSKCGSIQIAKEIFSSVPRSNISVWNAMIKGLAIHGLSMDALSVFWMMERENVLPDAVTF 366

Query: 472 LGILTACNHGGVIEEGRRYFDWMKSRYSIQPQLEHYGVMVDLYSRAGFLEEAYSIIMSMP 531
           LGILTACNHGG+IE+GRR+FDWMK+RYSIQPQLEHYGVMVDLYSRAGFLEEAYSII++MP
Sbjct: 367 LGILTACNHGGLIEQGRRFFDWMKNRYSIQPQLEHYGVMVDLYSRAGFLEEAYSIIVAMP 426

Query: 532 IEPDVVTWRTLLSGCRIYRNQELAEVAIANMSHRKSGDYVLLSNIYCSLNRWEHAETVRE 591
           IE DVVTWR LLSGCRIYRNQELAEVAIANMSHR SGDYVLLSNIYCSLNRWEHAE VRE
Sbjct: 427 IEADVVTWRALLSGCRIYRNQELAEVAIANMSHRGSGDYVLLSNIYCSLNRWEHAERVRE 486

Query: 592 MMKNKGVRKICGKSWIELAGTIQNFKSGDRSHPEIDAVYKVLGSLMKKTRAEGYMPVTEL 651
            MK+ GVRK CGKSWIEL G+IQ+FKSGDRSHPE DAVYKV+  LMK++R+EGYMPVT+L
Sbjct: 487 RMKSNGVRKSCGKSWIELGGSIQSFKSGDRSHPESDAVYKVVWRLMKRSRSEGYMPVTDL 546

Query: 652 VFMDISEEEKEENLSFHSEKLALAYAILKTSPGVKINISKNLRICDDCHRWIKLVSKLLC 711
           V MDISEEEKEENLS+HSEKLALAYAILKT PG KI+ISKNLR+CDDCHRWIKLVS LLC
Sbjct: 547 VLMDISEEEKEENLSYHSEKLALAYAILKTGPGAKISISKNLRMCDDCHRWIKLVSTLLC 606

Query: 712 RVIVVRDRIRFHQFEGGMCSCGDCW 736
           RV+VVRDRIRFHQFEGGMCSCGD W
Sbjct: 607 RVVVVRDRIRFHQFEGGMCSCGDRW 631

[Close]

BLAST of Spg007656 vs. NCBI nr
Match: XP_022922013.1 (pentatricopeptide repeat-containing protein At5g50990 isoform X2 [Cucurbita moschata])

HSP 1 Score: 885.2 bits (2286), Expect = 3.9e-253
Identity = 435/505 (86.14%), Postives = 468/505 (92.67%), Query Frame = 0


Query: 232 FQTLYRVLEACRLS-LDSKTAIETHARIIKFGYGNYPTLITSLVSTYQHAGYLNRVHQLL 291
           +QTLYRVLEACRLS  +SKTA ETHAR+IKFGYGNYPTL+TSLVS YQ A  LNRVHQLL
Sbjct: 125 YQTLYRVLEACRLSPSNSKTASETHARMIKFGYGNYPTLVTSLVSAYQRADCLNRVHQLL 184

Query: 292 DLLCSKHLDLVAMNLLIENFMKIRESKLAEKVFYIMPYRDVVTWNSIIGGCVKNAWYGKA 351
           +LLCSKHLDLVAMNL I+NFMKI E KLA++VF  MPYRDVVTWNSIIGGCVKNA Y +A
Sbjct: 185 NLLCSKHLDLVAMNLFIDNFMKIGECKLAKRVFDKMPYRDVVTWNSIIGGCVKNARYEEA 244

Query: 352 FKFFRQMLISNIQPDGFTFASILNACAKLGALSNTQWVHALMTQKKIELNSILISALIDA 411
           FKFFRQML SNIQPDGFTFAS+LNACA+LGA SNTQWVHALMTQKKIELNSIL  ALIDA
Sbjct: 245 FKFFRQMLNSNIQPDGFTFASVLNACAQLGAPSNTQWVHALMTQKKIELNSILSCALIDA 304

Query: 412 YSKCGSIQIAKEIFTSVPHNDISVWNAMIKGLAIHGLAMDALLVFSMMERENVLPDAVTF 471
           YSKCGSIQIAKEIF+SVP ++ISVWNAMIKGLAIHGL+MDAL VF MMERENVLPDAVTF
Sbjct: 305 YSKCGSIQIAKEIFSSVPRSNISVWNAMIKGLAIHGLSMDALSVFWMMERENVLPDAVTF 364

Query: 472 LGILTACNHGGVIEEGRRYFDWMKSRYSIQPQLEHYGVMVDLYSRAGFLEEAYSIIMSMP 531
           LGILTACNHGG+IE+GRR+FDWMK+RYSIQPQLEHYGVMVDLYSRAGFLEEAYSII++MP
Sbjct: 365 LGILTACNHGGLIEQGRRFFDWMKNRYSIQPQLEHYGVMVDLYSRAGFLEEAYSIIVAMP 424

Query: 532 IEPDVVTWRTLLSGCRIYRNQELAEVAIANMSHRKSGDYVLLSNIYCSLNRWEHAETVRE 591
           IE DVVTWR LLSGCRIYRNQELAEVAIANMSHR SGDYVLLSNIYCSLNRWEHAE VRE
Sbjct: 425 IEADVVTWRALLSGCRIYRNQELAEVAIANMSHRGSGDYVLLSNIYCSLNRWEHAERVRE 484

Query: 592 MMKNKGVRKICGKSWIELAGTIQNFKSGDRSHPEIDAVYKVLGSLMKKTRAEGYMPVTEL 651
            MK+ GVRK CGKSWIEL G+IQ+FKSGDRSHPE DAVYKV+  LMK++R+EGYMPVT+L
Sbjct: 485 RMKSNGVRKSCGKSWIELGGSIQSFKSGDRSHPESDAVYKVVWRLMKRSRSEGYMPVTDL 544

Query: 652 VFMDISEEEKEENLSFHSEKLALAYAILKTSPGVKINISKNLRICDDCHRWIKLVSKLLC 711
           V MDISEEEKEENLS+HSEKLALAYAILKT PG KI+ISKNLR+CDDCHRWIKLVS LLC
Sbjct: 545 VLMDISEEEKEENLSYHSEKLALAYAILKTGPGAKISISKNLRMCDDCHRWIKLVSTLLC 604

Query: 712 RVIVVRDRIRFHQFEGGMCSCGDCW 736
           RV+VVRDRIRFHQFEGGMCSCGD W
Sbjct: 605 RVVVVRDRIRFHQFEGGMCSCGDRW 629

[Close]

BLAST of Spg007656 vs. ExPASy Swiss-Prot
Match: Q9FI49 (Pentatricopeptide repeat-containing protein At5g50990 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H59 PE=2 SV=2)

HSP 1 Score: 580.9 bits (1496), Expect = 2.1e-164
Identity = 281/502 (55.98%), Postives = 368/502 (73.31%), Query Frame = 0


Query: 235 LYRVLEACRLSLDSKTAIETHARIIKFGYGNYPTLITSLVSTYQHAGYLNRVHQLLDLLC 294
           L +VLE+C+   +SK  ++ HA+I K GYG YP+L+ S V+ Y+         +LL    
Sbjct: 33  LKQVLESCKAPSNSKCVLQAHAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLARRLLLWFL 92

Query: 295 SKHLDLVAMNLLIENFMKIRESKLAEKVFYIMPYRDVVTWNSIIGGCVKNAWYGKAFKFF 354
           S    +  +NL+IE+ MKI ES LA+KV      ++V+TWN +IGG V+N  Y +A K  
Sbjct: 93  SLSPGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKAL 152

Query: 355 RQML-ISNIQPDGFTFASILNACAKLGALSNTQWVHALMTQKKIELNSILISALIDAYSK 414
           + ML  ++I+P+ F+FAS L ACA+LG L + +WVH+LM    IELN+IL SAL+D Y+K
Sbjct: 153 KNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAK 212

Query: 415 CGSIQIAKEIFTSVPHNDISVWNAMIKGLAIHGLAMDALLVFSMMERENVLPDAVTFLGI 474
           CG I  ++E+F SV  ND+S+WNAMI G A HGLA +A+ VFS ME E+V PD++TFLG+
Sbjct: 213 CGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGL 272

Query: 475 LTACNHGGVIEEGRRYFDWMKSRYSIQPQLEHYGVMVDLYSRAGFLEEAYSIIMSMPIEP 534
           LT C+H G++EEG+ YF  M  R+SIQP+LEHYG MVDL  RAG ++EAY +I SMPIEP
Sbjct: 273 LTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEP 332

Query: 535 DVVTWRTLLSGCRIYRNQELAEVAIANMSHRKSGDYVLLSNIYCSLNRWEHAETVREMMK 594
           DVV WR+LLS  R Y+N EL E+AI N+S  KSGDYVLLSNIY S  +WE A+ VRE+M 
Sbjct: 333 DVVIWRSLLSSSRTYKNPELGEIAIQNLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMS 392

Query: 595 NKGVRKICGKSWIELAGTIQNFKSGDRSHPEIDAVYKVLGSLMKKTRAEGYMPVTELVFM 654
            +G+RK  GKSW+E  G I  FK+GD SH E  A+YKVL  L++KT+++G++  T+LV M
Sbjct: 393 KEGIRKAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTDLVLM 452

Query: 655 DISEEEKEENLSFHSEKLALAYAILKTSPGVKINISKNLRICDDCHRWIKLVSKLLCRVI 714
           D+SEEEKEENL++HSEKLALAY ILK+SPG +I I KN+R+C DCH WIK VSKLL RVI
Sbjct: 453 DVSEEEKEENLNYHSEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVI 512

Query: 715 VVRDRIRFHQFEGGMCSCGDCW 736
           ++RDRIRFH+FE G+CSC D W
Sbjct: 513 IMRDRIRFHRFEDGLCSCRDYW 534

[Close]

BLAST of Spg007656 vs. ExPASy Swiss-Prot
Match: Q683I9 (Pentatricopeptide repeat-containing protein At3g62890 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H82 PE=2 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 3.3e-109
Identity = 205/492 (41.67%), Postives = 306/492 (62.20%), Query Frame = 0


Query: 254 THARIIKFGYGNYPTLITSLVSTYQHAGYLNRVHQLLDLLCSKHLDLVAMNLLIENFMKI 313
           THA+I+ FG    P + TSL++ Y   G L    ++ D   SK  DL A N ++  + K 
Sbjct: 84  THAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSK--DLPAWNSVVNAYAKA 143

Query: 314 RESKLAEKVFYIMPYRDVVTWNSIIGGCVKNAWYGKAFKFFRQMLISN-----IQPDGFT 373
                A K+F  MP R+V++W+ +I G V    Y +A   FR+M +       ++P+ FT
Sbjct: 144 GLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFT 203

Query: 374 FASILNACAKLGALSNTQWVHALMTQKKIELNSILISALIDAYSKCGSIQIAKEIFTSV- 433
            +++L+AC +LGAL   +WVHA + +  +E++ +L +ALID Y+KCGS++ AK +F ++ 
Sbjct: 204 MSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALG 263

Query: 434 PHNDISVWNAMIKGLAIHGLAMDALLVFS-MMERENVLPDAVTFLGILTACNHGGVIEEG 493
              D+  ++AMI  LA++GL  +   +FS M   +N+ P++VTF+GIL AC H G+I EG
Sbjct: 264 SKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEG 323

Query: 494 RRYFDWMKSRYSIQPQLEHYGVMVDLYSRAGFLEEAYSIIMSMPIEPDVVTWRTLLSGCR 553
           + YF  M   + I P ++HYG MVDLY R+G ++EA S I SMP+EPDV+ W +LLSG R
Sbjct: 324 KSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSR 383

Query: 554 IYRNQELAEVA---IANMSHRKSGDYVLLSNIYCSLNRWEHAETVREMMKNKGVRKICGK 613
           +  + +  E A   +  +    SG YVLLSN+Y    RW   + +R  M+ KG+ K+ G 
Sbjct: 384 MLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGC 443

Query: 614 SWIELAGTIQNFKSGDRSHPEIDAVYKVLGSLMKKTRAEGYMPVTELVFMDISEEEKEEN 673
           S++E+ G +  F  GD S  E + +Y +L  +M++ R  GY+  T+ V +D++E++KE  
Sbjct: 444 SYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIA 503

Query: 674 LSFHSEKLALAYAILKTSPGVKINISKNLRICDDCHRWIKLVSKLLCRVIVVRDRIRFHQ 733
           LS+HSEKLA+A+ ++KT PG  + I KNLRIC DCH  +K++SKL  R IVVRD  RFH 
Sbjct: 504 LSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHH 563

Query: 734 FEGGMCSCGDCW 736
           F  G CSC D W
Sbjct: 564 FRDGSCSCRDFW 573

[Close]

BLAST of Spg007656 vs. ExPASy Swiss-Prot
Match: Q9FI80 (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H38 PE=2 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 1.2e-108
Identity = 206/517 (39.85%), Postives = 304/517 (58.80%), Query Frame = 0


Query: 234 TLYRVLEACRLSLDSKTAIETHARIIKFGYGNYPTLITSLVSTYQHAGYLNRVHQLL--- 293
           T   VL+AC  +   +   + H   +K+G+G    ++++LV  Y   G++     L    
Sbjct: 130 TFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKN 189

Query: 294 ----DLLC-----SKHLDLVAMNLLIENFMKIRESKLAEKVFYIMPYRDVVTWNSIIGGC 353
               D++       +  ++V  N++I+ +M++ + K A  +F  M  R VV+WN++I G 
Sbjct: 190 IIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGY 249

Query: 354 VKNAWYGKAFKFFRQMLISNIQPDGFTFASILNACAKLGALSNTQWVHALMTQKKIELNS 413
             N ++  A + FR+M   +I+P+  T  S+L A ++LG+L   +W+H       I ++ 
Sbjct: 250 SLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDD 309

Query: 414 ILISALIDAYSKCGSIQIAKEIFTSVPHNDISVWNAMIKGLAIHGLAMDALLVFSMMERE 473
           +L SALID YSKCG I+ A  +F  +P  ++  W+AMI G AIHG A DA+  F  M + 
Sbjct: 310 VLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQA 369

Query: 474 NVLPDAVTFLGILTACNHGGVIEEGRRYFDWMKSRYSIQPQLEHYGVMVDLYSRAGFLEE 533
            V P  V ++ +LTAC+HGG++EEGRRYF  M S   ++P++EHYG MVDL  R+G L+E
Sbjct: 370 GVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDE 429

Query: 534 AYSIIMSMPIEPDVVTWRTLLSGCRIYRNQELAE-VA--IANMSHRKSGDYVLLSNIYCS 593
           A   I++MPI+PD V W+ LL  CR+  N E+ + VA  + +M    SG YV LSN+Y S
Sbjct: 430 AEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYAS 489

Query: 594 LNRWEHAETVREMMKNKGVRKICGKSWIELAGTIQNFKSGDRSHPEIDAVYKVLGSLMKK 653
              W     +R  MK K +RK  G S I++ G +  F   D SHP+   +  +L  +  K
Sbjct: 490 QGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDK 549

Query: 654 TRAEGYMPVTELVFMDISEEEKEENLSFHSEKLALAYAILKTSPGVKINISKNLRICDDC 713
            R  GY P+T  V +++ EE+KE  L +HSEK+A A+ ++ TSPG  I I KNLRIC+DC
Sbjct: 550 LRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDC 609

Query: 714 HRWIKLVSKLLCRVIVVRDRIRFHQFEGGMCSCGDCW 736
           H  IKL+SK+  R I VRDR RFH F+ G CSC D W
Sbjct: 610 HSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646

[Close]

BLAST of Spg007656 vs. ExPASy Swiss-Prot
Match: Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 1.2e-106
Identity = 196/534 (36.70%), Postives = 311/534 (58.24%), Query Frame = 0


Query: 213 YDVGNDPEGGYYARRRLL------HFQTLYRVLEACRLSLDSKTAIETHARIIKFGYGNY 272
           +   ++PE      +R+L      +  T   +L+AC      +   + HA+I K GY N 
Sbjct: 90  FSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYEND 149

Query: 273 PTLITSLVSTYQHAGYLNRVHQLLDLLCSKHLDLVAMNLLIENFMKIRESKLAEKVFYIM 332
              + SL+++Y   G     H L D +     D V+ N +I+ ++K  +  +A  +F  M
Sbjct: 150 VYAVNSLINSYAVTGNFKLAHLLFDRI--PEPDDVSWNSVIKGYVKAGKMDIALTLFRKM 209

Query: 333 PYRDVVTWNSIIGGCVKNAWYGKAFKFFRQMLISNIQPDGFTFASILNACAKLGALSNTQ 392
             ++ ++W ++I G V+     +A + F +M  S+++PD  + A+ L+ACA+LGAL   +
Sbjct: 210 AEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGK 269

Query: 393 WVHALMTQKKIELNSILISALIDAYSKCGSIQIAKEIFTSVPHNDISVWNAMIKGLAIHG 452
           W+H+ + + +I ++S+L   LID Y+KCG ++ A E+F ++    +  W A+I G A HG
Sbjct: 270 WIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHG 329

Query: 453 LAMDALLVFSMMERENVLPDAVTFLGILTACNHGGVIEEGRRYFDWMKSRYSIQPQLEHY 512
              +A+  F  M++  + P+ +TF  +LTAC++ G++EEG+  F  M+  Y+++P +EHY
Sbjct: 330 HGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHY 389

Query: 513 GVMVDLYSRAGFLEEAYSIIMSMPIEPDVVTWRTLLSGCRIYRN----QELAEVAIANMS 572
           G +VDL  RAG L+EA   I  MP++P+ V W  LL  CRI++N    +E+ E+ IA + 
Sbjct: 390 GCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIA-ID 449

Query: 573 HRKSGDYVLLSNIYCSLNRWEHAETVREMMKNKGVRKICGKSWIELAGTIQNFKSGDRSH 632
               G YV  +NI+    +W+ A   R +MK +GV K+ G S I L GT   F +GDRSH
Sbjct: 450 PYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSH 509

Query: 633 PEIDAVYKVLGSLMKKTRAEGYMPVTELVFMD-ISEEEKEENLSFHSEKLALAYAILKTS 692
           PEI+ +      + +K    GY+P  E + +D + ++E+E  +  HSEKLA+ Y ++KT 
Sbjct: 510 PEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITYGLIKTK 569

Query: 693 PGVKINISKNLRICDDCHRWIKLVSKLLCRVIVVRDRIRFHQFEGGMCSCGDCW 736
           PG  I I KNLR+C DCH+  KL+SK+  R IV+RDR RFH F  G CSCGD W
Sbjct: 570 PGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 620

[Close]

BLAST of Spg007656 vs. ExPASy Swiss-Prot
Match: Q9FND7 (Putative pentatricopeptide repeat-containing protein At5g40405 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H14 PE=3 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 3.4e-106
Identity = 205/546 (37.55%), Postives = 316/546 (57.88%), Query Frame = 0


Query: 196 IPEKTPRSIFVYFRGLFYDVGNDPEGGYYARRRLLHFQTLYRVLEACRLSLDSKTAIETH 255
           +PEK+    F ++R +    GND +   Y         T+  +++AC      +T ++ H
Sbjct: 86  VPEKS----FDFYRRIL-SSGNDLKPDNY---------TVNFLVQACTGLRMRETGLQVH 145

Query: 256 ARIIKFGYGNYPTLITSLVSTYQHAGYLNRVHQLLDLLCSKHLDLVAMNLLIENFMKIRE 315
              I+ G+ N P + T L+S Y   G L+  H++ + +     D V    ++    +  +
Sbjct: 146 GMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCP--DFVCRTAMVTACARCGD 205

Query: 316 SKLAEKVFYIMPYRDVVTWNSIIGGCVKNAWYGKAFKFFRQMLISNIQPDGFTFASILNA 375
              A K+F  MP RD + WN++I G  +     +A   F  M +  ++ +G    S+L+A
Sbjct: 206 VVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSA 265

Query: 376 CAKLGALSNTQWVHALMTQKKIELNSILISALIDAYSKCGSIQIAKEIFTSVPHNDISVW 435
           C +LGAL   +W H+ + + KI++   L + L+D Y+KCG ++ A E+F  +   ++  W
Sbjct: 266 CTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTW 325

Query: 436 NAMIKGLAIHGLAMDALLVFSMMERENVLPDAVTFLGILTACNHGGVIEEGRRYFDWMKS 495
           ++ + GLA++G     L +FS+M+++ V P+AVTF+ +L  C+  G ++EG+R+FD M++
Sbjct: 326 SSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRN 385

Query: 496 RYSIQPQLEHYGVMVDLYSRAGFLEEAYSIIMSMPIEPDVVTWRTLLSGCRIYRNQELAE 555
            + I+PQLEHYG +VDLY+RAG LE+A SII  MP++P    W +LL   R+Y+N EL  
Sbjct: 386 EFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGV 445

Query: 556 VAIANMSHRKS---GDYVLLSNIYCSLNRWEHAETVREMMKNKGVRKICGKSWIELAGTI 615
           +A   M   ++   G YVLLSNIY   N W++   VR+ MK+KGVRK  G S +E+ G +
Sbjct: 446 LASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEV 505

Query: 616 QNFKSGDRSHP---EIDAVYKVLGSLMKKTRAEGYMPVTELVFMDISEEEKEENLSFHSE 675
             F  GD+SHP   +IDAV+K    + ++ R  GY   T  V  DI EEEKE+ L  HSE
Sbjct: 506 HEFFVGDKSHPKYTQIDAVWK---DISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHSE 565

Query: 676 KLALAYAILKTSPGVKINISKNLRICDDCHRWIKLVSKLLCRVIVVRDRIRFHQFEGGMC 735
           K A+A+ I+     V I I KNLR+C DCH+   ++SK+  R I+VRDR RFH F+ G C
Sbjct: 566 KAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGHC 612

[Close]

BLAST of Spg007656 vs. ExPASy TrEMBL
Match: A0A6J1JL20 (pentatricopeptide repeat-containing protein At5g50990 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485562 PE=3 SV=1)

HSP 1 Score: 885.9 bits (2288), Expect = 1.1e-253
Identity = 433/505 (85.74%), Postives = 470/505 (93.07%), Query Frame = 0


Query: 232 FQTLYRVLEACRLS-LDSKTAIETHARIIKFGYGNYPTLITSLVSTYQHAGYLNRVHQLL 291
           +QTLYRVLEACRLS  +SKTA ETHAR+IKFGYGNYPTL+TSLVS YQ A  LNRVHQLL
Sbjct: 124 YQTLYRVLEACRLSPSNSKTASETHARMIKFGYGNYPTLVTSLVSAYQRADCLNRVHQLL 183

Query: 292 DLLCSKHLDLVAMNLLIENFMKIRESKLAEKVFYIMPYRDVVTWNSIIGGCVKNAWYGKA 351
           +LLCSKHLDLVAMNL I+NFMKI E KLA++VF  MPYRDVVTWNSIIGGCVKNA Y +A
Sbjct: 184 NLLCSKHLDLVAMNLFIDNFMKIGECKLAKRVFDKMPYRDVVTWNSIIGGCVKNARYEEA 243

Query: 352 FKFFRQMLISNIQPDGFTFASILNACAKLGALSNTQWVHALMTQKKIELNSILISALIDA 411
           FKFFRQML+SNIQPDGFTFAS+LNACA+LGA SNTQWVHALMTQKKI+LNSIL  ALIDA
Sbjct: 244 FKFFRQMLVSNIQPDGFTFASVLNACAQLGAPSNTQWVHALMTQKKIDLNSILSCALIDA 303

Query: 412 YSKCGSIQIAKEIFTSVPHNDISVWNAMIKGLAIHGLAMDALLVFSMMERENVLPDAVTF 471
           YSKCGSIQIAKEIF+SVP ++ISVWNAMIKGLAIHGL+MDAL VF MMERENVLPDAVTF
Sbjct: 304 YSKCGSIQIAKEIFSSVPRSNISVWNAMIKGLAIHGLSMDALSVFWMMERENVLPDAVTF 363

Query: 472 LGILTACNHGGVIEEGRRYFDWMKSRYSIQPQLEHYGVMVDLYSRAGFLEEAYSIIMSMP 531
           LGILTACNHGG+IE+GRR+FDWMK+RYSIQPQLEHYGVMVDLYSRAGFLEEAYSII++MP
Sbjct: 364 LGILTACNHGGLIEQGRRFFDWMKNRYSIQPQLEHYGVMVDLYSRAGFLEEAYSIIVAMP 423

Query: 532 IEPDVVTWRTLLSGCRIYRNQELAEVAIANMSHRKSGDYVLLSNIYCSLNRWEHAETVRE 591
           IE DVVTWR LLSGCRIYRNQELAEVAIANMSHR SGDYVLLSNIYCSLNRWEHAE VRE
Sbjct: 424 IEADVVTWRALLSGCRIYRNQELAEVAIANMSHRGSGDYVLLSNIYCSLNRWEHAERVRE 483

Query: 592 MMKNKGVRKICGKSWIELAGTIQNFKSGDRSHPEIDAVYKVLGSLMKKTRAEGYMPVTEL 651
            MK+ GVRK CGKSWIEL G+IQ+F+SGDRSHPE DAVYKV+  LMK++R+EGYMPVT+L
Sbjct: 484 RMKSNGVRKSCGKSWIELGGSIQSFRSGDRSHPESDAVYKVVWRLMKRSRSEGYMPVTDL 543

Query: 652 VFMDISEEEKEENLSFHSEKLALAYAILKTSPGVKINISKNLRICDDCHRWIKLVSKLLC 711
           V MDISEEEKEENLS+HSEKLALAYAILKTSPG KI+ISKNLR+CDDCHRWIK+VS LLC
Sbjct: 544 VLMDISEEEKEENLSYHSEKLALAYAILKTSPGAKISISKNLRMCDDCHRWIKIVSTLLC 603

Query: 712 RVIVVRDRIRFHQFEGGMCSCGDCW 736
           RV+VVRDRIRFHQFEGGMCSCGD W
Sbjct: 604 RVVVVRDRIRFHQFEGGMCSCGDRW 628

[Close]

BLAST of Spg007656 vs. ExPASy TrEMBL
Match: A0A6J1JLQ2 (pentatricopeptide repeat-containing protein At5g50990 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485562 PE=3 SV=1)

HSP 1 Score: 885.9 bits (2288), Expect = 1.1e-253
Identity = 433/505 (85.74%), Postives = 470/505 (93.07%), Query Frame = 0


Query: 232 FQTLYRVLEACRLS-LDSKTAIETHARIIKFGYGNYPTLITSLVSTYQHAGYLNRVHQLL 291
           +QTLYRVLEACRLS  +SKTA ETHAR+IKFGYGNYPTL+TSLVS YQ A  LNRVHQLL
Sbjct: 126 YQTLYRVLEACRLSPSNSKTASETHARMIKFGYGNYPTLVTSLVSAYQRADCLNRVHQLL 185

Query: 292 DLLCSKHLDLVAMNLLIENFMKIRESKLAEKVFYIMPYRDVVTWNSIIGGCVKNAWYGKA 351
           +LLCSKHLDLVAMNL I+NFMKI E KLA++VF  MPYRDVVTWNSIIGGCVKNA Y +A
Sbjct: 186 NLLCSKHLDLVAMNLFIDNFMKIGECKLAKRVFDKMPYRDVVTWNSIIGGCVKNARYEEA 245

Query: 352 FKFFRQMLISNIQPDGFTFASILNACAKLGALSNTQWVHALMTQKKIELNSILISALIDA 411
           FKFFRQML+SNIQPDGFTFAS+LNACA+LGA SNTQWVHALMTQKKI+LNSIL  ALIDA
Sbjct: 246 FKFFRQMLVSNIQPDGFTFASVLNACAQLGAPSNTQWVHALMTQKKIDLNSILSCALIDA 305

Query: 412 YSKCGSIQIAKEIFTSVPHNDISVWNAMIKGLAIHGLAMDALLVFSMMERENVLPDAVTF 471
           YSKCGSIQIAKEIF+SVP ++ISVWNAMIKGLAIHGL+MDAL VF MMERENVLPDAVTF
Sbjct: 306 YSKCGSIQIAKEIFSSVPRSNISVWNAMIKGLAIHGLSMDALSVFWMMERENVLPDAVTF 365

Query: 472 LGILTACNHGGVIEEGRRYFDWMKSRYSIQPQLEHYGVMVDLYSRAGFLEEAYSIIMSMP 531
           LGILTACNHGG+IE+GRR+FDWMK+RYSIQPQLEHYGVMVDLYSRAGFLEEAYSII++MP
Sbjct: 366 LGILTACNHGGLIEQGRRFFDWMKNRYSIQPQLEHYGVMVDLYSRAGFLEEAYSIIVAMP 425

Query: 532 IEPDVVTWRTLLSGCRIYRNQELAEVAIANMSHRKSGDYVLLSNIYCSLNRWEHAETVRE 591
           IE DVVTWR LLSGCRIYRNQELAEVAIANMSHR SGDYVLLSNIYCSLNRWEHAE VRE
Sbjct: 426 IEADVVTWRALLSGCRIYRNQELAEVAIANMSHRGSGDYVLLSNIYCSLNRWEHAERVRE 485

Query: 592 MMKNKGVRKICGKSWIELAGTIQNFKSGDRSHPEIDAVYKVLGSLMKKTRAEGYMPVTEL 651
            MK+ GVRK CGKSWIEL G+IQ+F+SGDRSHPE DAVYKV+  LMK++R+EGYMPVT+L
Sbjct: 486 RMKSNGVRKSCGKSWIELGGSIQSFRSGDRSHPESDAVYKVVWRLMKRSRSEGYMPVTDL 545

Query: 652 VFMDISEEEKEENLSFHSEKLALAYAILKTSPGVKINISKNLRICDDCHRWIKLVSKLLC 711
           V MDISEEEKEENLS+HSEKLALAYAILKTSPG KI+ISKNLR+CDDCHRWIK+VS LLC
Sbjct: 546 VLMDISEEEKEENLSYHSEKLALAYAILKTSPGAKISISKNLRMCDDCHRWIKIVSTLLC 605

Query: 712 RVIVVRDRIRFHQFEGGMCSCGDCW 736
           RV+VVRDRIRFHQFEGGMCSCGD W
Sbjct: 606 RVVVVRDRIRFHQFEGGMCSCGDRW 630

[Close]

BLAST of Spg007656 vs. ExPASy TrEMBL
Match: A0A6J1E1Y0 (pentatricopeptide repeat-containing protein At5g50990 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430093 PE=3 SV=1)

HSP 1 Score: 885.2 bits (2286), Expect = 1.9e-253
Identity = 435/505 (86.14%), Postives = 468/505 (92.67%), Query Frame = 0


Query: 232 FQTLYRVLEACRLS-LDSKTAIETHARIIKFGYGNYPTLITSLVSTYQHAGYLNRVHQLL 291
           +QTLYRVLEACRLS  +SKTA ETHAR+IKFGYGNYPTL+TSLVS YQ A  LNRVHQLL
Sbjct: 127 YQTLYRVLEACRLSPSNSKTASETHARMIKFGYGNYPTLVTSLVSAYQRADCLNRVHQLL 186

Query: 292 DLLCSKHLDLVAMNLLIENFMKIRESKLAEKVFYIMPYRDVVTWNSIIGGCVKNAWYGKA 351
           +LLCSKHLDLVAMNL I+NFMKI E KLA++VF  MPYRDVVTWNSIIGGCVKNA Y +A
Sbjct: 187 NLLCSKHLDLVAMNLFIDNFMKIGECKLAKRVFDKMPYRDVVTWNSIIGGCVKNARYEEA 246

Query: 352 FKFFRQMLISNIQPDGFTFASILNACAKLGALSNTQWVHALMTQKKIELNSILISALIDA 411
           FKFFRQML SNIQPDGFTFAS+LNACA+LGA SNTQWVHALMTQKKIELNSIL  ALIDA
Sbjct: 247 FKFFRQMLNSNIQPDGFTFASVLNACAQLGAPSNTQWVHALMTQKKIELNSILSCALIDA 306

Query: 412 YSKCGSIQIAKEIFTSVPHNDISVWNAMIKGLAIHGLAMDALLVFSMMERENVLPDAVTF 471
           YSKCGSIQIAKEIF+SVP ++ISVWNAMIKGLAIHGL+MDAL VF MMERENVLPDAVTF
Sbjct: 307 YSKCGSIQIAKEIFSSVPRSNISVWNAMIKGLAIHGLSMDALSVFWMMERENVLPDAVTF 366

Query: 472 LGILTACNHGGVIEEGRRYFDWMKSRYSIQPQLEHYGVMVDLYSRAGFLEEAYSIIMSMP 531
           LGILTACNHGG+IE+GRR+FDWMK+RYSIQPQLEHYGVMVDLYSRAGFLEEAYSII++MP
Sbjct: 367 LGILTACNHGGLIEQGRRFFDWMKNRYSIQPQLEHYGVMVDLYSRAGFLEEAYSIIVAMP 426

Query: 532 IEPDVVTWRTLLSGCRIYRNQELAEVAIANMSHRKSGDYVLLSNIYCSLNRWEHAETVRE 591
           IE DVVTWR LLSGCRIYRNQELAEVAIANMSHR SGDYVLLSNIYCSLNRWEHAE VRE
Sbjct: 427 IEADVVTWRALLSGCRIYRNQELAEVAIANMSHRGSGDYVLLSNIYCSLNRWEHAERVRE 486

Query: 592 MMKNKGVRKICGKSWIELAGTIQNFKSGDRSHPEIDAVYKVLGSLMKKTRAEGYMPVTEL 651
            MK+ GVRK CGKSWIEL G+IQ+FKSGDRSHPE DAVYKV+  LMK++R+EGYMPVT+L
Sbjct: 487 RMKSNGVRKSCGKSWIELGGSIQSFKSGDRSHPESDAVYKVVWRLMKRSRSEGYMPVTDL 546

Query: 652 VFMDISEEEKEENLSFHSEKLALAYAILKTSPGVKINISKNLRICDDCHRWIKLVSKLLC 711
           V MDISEEEKEENLS+HSEKLALAYAILKT PG KI+ISKNLR+CDDCHRWIKLVS LLC
Sbjct: 547 VLMDISEEEKEENLSYHSEKLALAYAILKTGPGAKISISKNLRMCDDCHRWIKLVSTLLC 606

Query: 712 RVIVVRDRIRFHQFEGGMCSCGDCW 736
           RV+VVRDRIRFHQFEGGMCSCGD W
Sbjct: 607 RVVVVRDRIRFHQFEGGMCSCGDRW 631

[Close]

BLAST of Spg007656 vs. ExPASy TrEMBL
Match: A0A6J1E5D9 (pentatricopeptide repeat-containing protein At5g50990 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430093 PE=3 SV=1)

HSP 1 Score: 885.2 bits (2286), Expect = 1.9e-253
Identity = 435/505 (86.14%), Postives = 468/505 (92.67%), Query Frame = 0


Query: 232 FQTLYRVLEACRLS-LDSKTAIETHARIIKFGYGNYPTLITSLVSTYQHAGYLNRVHQLL 291
           +QTLYRVLEACRLS  +SKTA ETHAR+IKFGYGNYPTL+TSLVS YQ A  LNRVHQLL
Sbjct: 125 YQTLYRVLEACRLSPSNSKTASETHARMIKFGYGNYPTLVTSLVSAYQRADCLNRVHQLL 184

Query: 292 DLLCSKHLDLVAMNLLIENFMKIRESKLAEKVFYIMPYRDVVTWNSIIGGCVKNAWYGKA 351
           +LLCSKHLDLVAMNL I+NFMKI E KLA++VF  MPYRDVVTWNSIIGGCVKNA Y +A
Sbjct: 185 NLLCSKHLDLVAMNLFIDNFMKIGECKLAKRVFDKMPYRDVVTWNSIIGGCVKNARYEEA 244

Query: 352 FKFFRQMLISNIQPDGFTFASILNACAKLGALSNTQWVHALMTQKKIELNSILISALIDA 411
           FKFFRQML SNIQPDGFTFAS+LNACA+LGA SNTQWVHALMTQKKIELNSIL  ALIDA
Sbjct: 245 FKFFRQMLNSNIQPDGFTFASVLNACAQLGAPSNTQWVHALMTQKKIELNSILSCALIDA 304

Query: 412 YSKCGSIQIAKEIFTSVPHNDISVWNAMIKGLAIHGLAMDALLVFSMMERENVLPDAVTF 471
           YSKCGSIQIAKEIF+SVP ++ISVWNAMIKGLAIHGL+MDAL VF MMERENVLPDAVTF
Sbjct: 305 YSKCGSIQIAKEIFSSVPRSNISVWNAMIKGLAIHGLSMDALSVFWMMERENVLPDAVTF 364

Query: 472 LGILTACNHGGVIEEGRRYFDWMKSRYSIQPQLEHYGVMVDLYSRAGFLEEAYSIIMSMP 531
           LGILTACNHGG+IE+GRR+FDWMK+RYSIQPQLEHYGVMVDLYSRAGFLEEAYSII++MP
Sbjct: 365 LGILTACNHGGLIEQGRRFFDWMKNRYSIQPQLEHYGVMVDLYSRAGFLEEAYSIIVAMP 424

Query: 532 IEPDVVTWRTLLSGCRIYRNQELAEVAIANMSHRKSGDYVLLSNIYCSLNRWEHAETVRE 591
           IE DVVTWR LLSGCRIYRNQELAEVAIANMSHR SGDYVLLSNIYCSLNRWEHAE VRE
Sbjct: 425 IEADVVTWRALLSGCRIYRNQELAEVAIANMSHRGSGDYVLLSNIYCSLNRWEHAERVRE 484

Query: 592 MMKNKGVRKICGKSWIELAGTIQNFKSGDRSHPEIDAVYKVLGSLMKKTRAEGYMPVTEL 651
            MK+ GVRK CGKSWIEL G+IQ+FKSGDRSHPE DAVYKV+  LMK++R+EGYMPVT+L
Sbjct: 485 RMKSNGVRKSCGKSWIELGGSIQSFKSGDRSHPESDAVYKVVWRLMKRSRSEGYMPVTDL 544

Query: 652 VFMDISEEEKEENLSFHSEKLALAYAILKTSPGVKINISKNLRICDDCHRWIKLVSKLLC 711
           V MDISEEEKEENLS+HSEKLALAYAILKT PG KI+ISKNLR+CDDCHRWIKLVS LLC
Sbjct: 545 VLMDISEEEKEENLSYHSEKLALAYAILKTGPGAKISISKNLRMCDDCHRWIKLVSTLLC 604

Query: 712 RVIVVRDRIRFHQFEGGMCSCGDCW 736
           RV+VVRDRIRFHQFEGGMCSCGD W
Sbjct: 605 RVVVVRDRIRFHQFEGGMCSCGDRW 629

[Close]

BLAST of Spg007656 vs. ExPASy TrEMBL
Match: A0A6J1BZT0 (pentatricopeptide repeat-containing protein At5g50990 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007183 PE=3 SV=1)

HSP 1 Score: 884.0 bits (2283), Expect = 4.2e-253
Identity = 430/513 (83.82%), Postives = 474/513 (92.40%), Query Frame = 0


Query: 223 YYARRRLLHFQTLYRVLEACRLSLDSKTAIETHARIIKFGYGNYPTLITSLVSTYQHAGY 282
           +++   +  +QTLY VLEACR S +SKTAIETHARIIKFGYG+YPTLITSLVSTYQ AG 
Sbjct: 18  FFSSNSISDYQTLYLVLEACRHSSNSKTAIETHARIIKFGYGDYPTLITSLVSTYQRAGC 77

Query: 283 LNRVHQLLDLLCSKHLDLVAMNLLIENFMKIRESKLAEKVFYIMPYRDVVTWNSIIGGCV 342
           LN V++LL LLCSKHLDLVAMN+ IENFMKI E K A+KVFY MPYRDV+TWNSIIGGCV
Sbjct: 78  LNHVNRLLGLLCSKHLDLVAMNIFIENFMKIGEYKFAKKVFYKMPYRDVITWNSIIGGCV 137

Query: 343 KNAWYGKAFKFFRQMLISNIQPDGFTFASILNACAKLGALSNTQWVHALMTQKKIELNSI 402
           KNA Y +AF+FF +MLISNIQPDGFTFASIL A A+LGALSN Q VHA+MT+KK+ELNSI
Sbjct: 138 KNACYEEAFRFFSEMLISNIQPDGFTFASILKASAQLGALSNAQSVHAIMTEKKVELNSI 197

Query: 403 LISALIDAYSKCGSIQIAKEIFTSVPHNDISVWNAMIKGLAIHGLAMDALLVFSMMEREN 462
           L SALI  YSKCGSIQIAKEIF+SVPH+DISVWNAMIKGLAIHGLAMDALLVFSMMER++
Sbjct: 198 LNSALIYTYSKCGSIQIAKEIFSSVPHSDISVWNAMIKGLAIHGLAMDALLVFSMMERDS 257

Query: 463 VLPDAVTFLGILTACNHGGVIEEGRRYFDWMKSRYSIQPQLEHYGVMVDLYSRAGFLEEA 522
           V PDAVTFLG LTACNHGG++E+GR+YFDWM+SRYSI+PQLEHYGVMVDLYSRAGFLEEA
Sbjct: 258 VRPDAVTFLGTLTACNHGGLVEQGRKYFDWMRSRYSIEPQLEHYGVMVDLYSRAGFLEEA 317

Query: 523 YSIIMSMPIEPDVVTWRTLLSGCRIYRNQELAEVAIANMSHRKSGDYVLLSNIYCSLNRW 582
           YS I +MPIEPDVVTWRTLLSGC+IYRNQELAEVAIAN+S  KSGDYVLLSNIYCS +RW
Sbjct: 318 YSTIKAMPIEPDVVTWRTLLSGCKIYRNQELAEVAIANISDLKSGDYVLLSNIYCSFHRW 377

Query: 583 EHAETVREMMKNKGVRKICGKSWIELAGTIQNFKSGDRSHPEIDAVYKVLGSLMKKTRAE 642
           E+AETVREMMK+KGVRK CGKSWIELAG+I  FKSGDRSHPEI+AVY+VLGSL+K+TR+E
Sbjct: 378 EYAETVREMMKHKGVRKNCGKSWIELAGSIHKFKSGDRSHPEINAVYEVLGSLIKRTRSE 437

Query: 643 GYMPVTELVFMDISEEEKEENLSFHSEKLALAYAILKTSPGVKINISKNLRICDDCHRWI 702
           GYMPVTE VFMDISEEEKEENLSFHSEKLALAYAILKTSPG KI+ISKNLRICDDCHRWI
Sbjct: 438 GYMPVTEFVFMDISEEEKEENLSFHSEKLALAYAILKTSPGEKISISKNLRICDDCHRWI 497

Query: 703 KLVSKLLCRVIVVRDRIRFHQFEGGMCSCGDCW 736
           KLVS++LCRVIVVRDRIRFHQFEGGMCSCGDCW
Sbjct: 498 KLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDCW 530

[Close]

BLAST of Spg007656 vs. TAIR 10
Match: AT5G50990.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 580.9 bits (1496), Expect = 1.5e-165
Identity = 281/502 (55.98%), Postives = 368/502 (73.31%), Query Frame = 0


Query: 235 LYRVLEACRLSLDSKTAIETHARIIKFGYGNYPTLITSLVSTYQHAGYLNRVHQLLDLLC 294
           L +VLE+C+   +SK  ++ HA+I K GYG YP+L+ S V+ Y+         +LL    
Sbjct: 33  LKQVLESCKAPSNSKCVLQAHAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLARRLLLWFL 92

Query: 295 SKHLDLVAMNLLIENFMKIRESKLAEKVFYIMPYRDVVTWNSIIGGCVKNAWYGKAFKFF 354
           S    +  +NL+IE+ MKI ES LA+KV      ++V+TWN +IGG V+N  Y +A K  
Sbjct: 93  SLSPGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKAL 152

Query: 355 RQML-ISNIQPDGFTFASILNACAKLGALSNTQWVHALMTQKKIELNSILISALIDAYSK 414
           + ML  ++I+P+ F+FAS L ACA+LG L + +WVH+LM    IELN+IL SAL+D Y+K
Sbjct: 153 KNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAK 212

Query: 415 CGSIQIAKEIFTSVPHNDISVWNAMIKGLAIHGLAMDALLVFSMMERENVLPDAVTFLGI 474
           CG I  ++E+F SV  ND+S+WNAMI G A HGLA +A+ VFS ME E+V PD++TFLG+
Sbjct: 213 CGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGL 272

Query: 475 LTACNHGGVIEEGRRYFDWMKSRYSIQPQLEHYGVMVDLYSRAGFLEEAYSIIMSMPIEP 534
           LT C+H G++EEG+ YF  M  R+SIQP+LEHYG MVDL  RAG ++EAY +I SMPIEP
Sbjct: 273 LTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEP 332

Query: 535 DVVTWRTLLSGCRIYRNQELAEVAIANMSHRKSGDYVLLSNIYCSLNRWEHAETVREMMK 594
           DVV WR+LLS  R Y+N EL E+AI N+S  KSGDYVLLSNIY S  +WE A+ VRE+M 
Sbjct: 333 DVVIWRSLLSSSRTYKNPELGEIAIQNLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMS 392

Query: 595 NKGVRKICGKSWIELAGTIQNFKSGDRSHPEIDAVYKVLGSLMKKTRAEGYMPVTELVFM 654
            +G+RK  GKSW+E  G I  FK+GD SH E  A+YKVL  L++KT+++G++  T+LV M
Sbjct: 393 KEGIRKAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTDLVLM 452

Query: 655 DISEEEKEENLSFHSEKLALAYAILKTSPGVKINISKNLRICDDCHRWIKLVSKLLCRVI 714
           D+SEEEKEENL++HSEKLALAY ILK+SPG +I I KN+R+C DCH WIK VSKLL RVI
Sbjct: 453 DVSEEEKEENLNYHSEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVI 512

Query: 715 VVRDRIRFHQFEGGMCSCGDCW 736
           ++RDRIRFH+FE G+CSC D W
Sbjct: 513 IMRDRIRFHRFEDGLCSCRDYW 534

[Close]

BLAST of Spg007656 vs. TAIR 10
Match: AT3G62890.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 397.5 bits (1020), Expect = 2.3e-110
Identity = 205/492 (41.67%), Postives = 306/492 (62.20%), Query Frame = 0


Query: 254 THARIIKFGYGNYPTLITSLVSTYQHAGYLNRVHQLLDLLCSKHLDLVAMNLLIENFMKI 313
           THA+I+ FG    P + TSL++ Y   G L    ++ D   SK  DL A N ++  + K 
Sbjct: 84  THAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSK--DLPAWNSVVNAYAKA 143

Query: 314 RESKLAEKVFYIMPYRDVVTWNSIIGGCVKNAWYGKAFKFFRQMLISN-----IQPDGFT 373
                A K+F  MP R+V++W+ +I G V    Y +A   FR+M +       ++P+ FT
Sbjct: 144 GLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFT 203

Query: 374 FASILNACAKLGALSNTQWVHALMTQKKIELNSILISALIDAYSKCGSIQIAKEIFTSV- 433
            +++L+AC +LGAL   +WVHA + +  +E++ +L +ALID Y+KCGS++ AK +F ++ 
Sbjct: 204 MSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALG 263

Query: 434 PHNDISVWNAMIKGLAIHGLAMDALLVFS-MMERENVLPDAVTFLGILTACNHGGVIEEG 493
              D+  ++AMI  LA++GL  +   +FS M   +N+ P++VTF+GIL AC H G+I EG
Sbjct: 264 SKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEG 323

Query: 494 RRYFDWMKSRYSIQPQLEHYGVMVDLYSRAGFLEEAYSIIMSMPIEPDVVTWRTLLSGCR 553
           + YF  M   + I P ++HYG MVDLY R+G ++EA S I SMP+EPDV+ W +LLSG R
Sbjct: 324 KSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSR 383

Query: 554 IYRNQELAEVA---IANMSHRKSGDYVLLSNIYCSLNRWEHAETVREMMKNKGVRKICGK 613
           +  + +  E A   +  +    SG YVLLSN+Y    RW   + +R  M+ KG+ K+ G 
Sbjct: 384 MLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGC 443

Query: 614 SWIELAGTIQNFKSGDRSHPEIDAVYKVLGSLMKKTRAEGYMPVTELVFMDISEEEKEEN 673
           S++E+ G +  F  GD S  E + +Y +L  +M++ R  GY+  T+ V +D++E++KE  
Sbjct: 444 SYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIA 503

Query: 674 LSFHSEKLALAYAILKTSPGVKINISKNLRICDDCHRWIKLVSKLLCRVIVVRDRIRFHQ 733
           LS+HSEKLA+A+ ++KT PG  + I KNLRIC DCH  +K++SKL  R IVVRD  RFH 
Sbjct: 504 LSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHH 563

Query: 734 FEGGMCSCGDCW 736
           F  G CSC D W
Sbjct: 564 FRDGSCSCRDFW 573

[Close]

BLAST of Spg007656 vs. TAIR 10
Match: AT5G48910.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 395.6 bits (1015), Expect = 8.8e-110
Identity = 206/517 (39.85%), Postives = 304/517 (58.80%), Query Frame = 0


Query: 234 TLYRVLEACRLSLDSKTAIETHARIIKFGYGNYPTLITSLVSTYQHAGYLNRVHQLL--- 293
           T   VL+AC  +   +   + H   +K+G+G    ++++LV  Y   G++     L    
Sbjct: 130 TFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKN 189

Query: 294 ----DLLC-----SKHLDLVAMNLLIENFMKIRESKLAEKVFYIMPYRDVVTWNSIIGGC 353
               D++       +  ++V  N++I+ +M++ + K A  +F  M  R VV+WN++I G 
Sbjct: 190 IIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGY 249

Query: 354 VKNAWYGKAFKFFRQMLISNIQPDGFTFASILNACAKLGALSNTQWVHALMTQKKIELNS 413
             N ++  A + FR+M   +I+P+  T  S+L A ++LG+L   +W+H       I ++ 
Sbjct: 250 SLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDD 309

Query: 414 ILISALIDAYSKCGSIQIAKEIFTSVPHNDISVWNAMIKGLAIHGLAMDALLVFSMMERE 473
           +L SALID YSKCG I+ A  +F  +P  ++  W+AMI G AIHG A DA+  F  M + 
Sbjct: 310 VLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQA 369

Query: 474 NVLPDAVTFLGILTACNHGGVIEEGRRYFDWMKSRYSIQPQLEHYGVMVDLYSRAGFLEE 533
            V P  V ++ +LTAC+HGG++EEGRRYF  M S   ++P++EHYG MVDL  R+G L+E
Sbjct: 370 GVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDE 429

Query: 534 AYSIIMSMPIEPDVVTWRTLLSGCRIYRNQELAE-VA--IANMSHRKSGDYVLLSNIYCS 593
           A   I++MPI+PD V W+ LL  CR+  N E+ + VA  + +M    SG YV LSN+Y S
Sbjct: 430 AEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYAS 489

Query: 594 LNRWEHAETVREMMKNKGVRKICGKSWIELAGTIQNFKSGDRSHPEIDAVYKVLGSLMKK 653
              W     +R  MK K +RK  G S I++ G +  F   D SHP+   +  +L  +  K
Sbjct: 490 QGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDK 549

Query: 654 TRAEGYMPVTELVFMDISEEEKEENLSFHSEKLALAYAILKTSPGVKINISKNLRICDDC 713
            R  GY P+T  V +++ EE+KE  L +HSEK+A A+ ++ TSPG  I I KNLRIC+DC
Sbjct: 550 LRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDC 609

Query: 714 HRWIKLVSKLLCRVIVVRDRIRFHQFEGGMCSCGDCW 736
           H  IKL+SK+  R I VRDR RFH F+ G CSC D W
Sbjct: 610 HSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646

[Close]

BLAST of Spg007656 vs. TAIR 10
Match: AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 389.0 bits (998), Expect = 8.2e-108
Identity = 196/534 (36.70%), Postives = 311/534 (58.24%), Query Frame = 0


Query: 213 YDVGNDPEGGYYARRRLL------HFQTLYRVLEACRLSLDSKTAIETHARIIKFGYGNY 272
           +   ++PE      +R+L      +  T   +L+AC      +   + HA+I K GY N 
Sbjct: 90  FSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYEND 149

Query: 273 PTLITSLVSTYQHAGYLNRVHQLLDLLCSKHLDLVAMNLLIENFMKIRESKLAEKVFYIM 332
              + SL+++Y   G     H L D +     D V+ N +I+ ++K  +  +A  +F  M
Sbjct: 150 VYAVNSLINSYAVTGNFKLAHLLFDRI--PEPDDVSWNSVIKGYVKAGKMDIALTLFRKM 209

Query: 333 PYRDVVTWNSIIGGCVKNAWYGKAFKFFRQMLISNIQPDGFTFASILNACAKLGALSNTQ 392
             ++ ++W ++I G V+     +A + F +M  S+++PD  + A+ L+ACA+LGAL   +
Sbjct: 210 AEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGK 269

Query: 393 WVHALMTQKKIELNSILISALIDAYSKCGSIQIAKEIFTSVPHNDISVWNAMIKGLAIHG 452
           W+H+ + + +I ++S+L   LID Y+KCG ++ A E+F ++    +  W A+I G A HG
Sbjct: 270 WIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHG 329

Query: 453 LAMDALLVFSMMERENVLPDAVTFLGILTACNHGGVIEEGRRYFDWMKSRYSIQPQLEHY 512
              +A+  F  M++  + P+ +TF  +LTAC++ G++EEG+  F  M+  Y+++P +EHY
Sbjct: 330 HGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHY 389

Query: 513 GVMVDLYSRAGFLEEAYSIIMSMPIEPDVVTWRTLLSGCRIYRN----QELAEVAIANMS 572
           G +VDL  RAG L+EA   I  MP++P+ V W  LL  CRI++N    +E+ E+ IA + 
Sbjct: 390 GCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIA-ID 449

Query: 573 HRKSGDYVLLSNIYCSLNRWEHAETVREMMKNKGVRKICGKSWIELAGTIQNFKSGDRSH 632
               G YV  +NI+    +W+ A   R +MK +GV K+ G S I L GT   F +GDRSH
Sbjct: 450 PYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSH 509

Query: 633 PEIDAVYKVLGSLMKKTRAEGYMPVTELVFMD-ISEEEKEENLSFHSEKLALAYAILKTS 692
           PEI+ +      + +K    GY+P  E + +D + ++E+E  +  HSEKLA+ Y ++KT 
Sbjct: 510 PEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITYGLIKTK 569

Query: 693 PGVKINISKNLRICDDCHRWIKLVSKLLCRVIVVRDRIRFHQFEGGMCSCGDCW 736
           PG  I I KNLR+C DCH+  KL+SK+  R IV+RDR RFH F  G CSCGD W
Sbjct: 570 PGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 620

[Close]

BLAST of Spg007656 vs. TAIR 10
Match: AT5G40405.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 387.5 bits (994), Expect = 2.4e-107
Identity = 205/546 (37.55%), Postives = 316/546 (57.88%), Query Frame = 0


Query: 196 IPEKTPRSIFVYFRGLFYDVGNDPEGGYYARRRLLHFQTLYRVLEACRLSLDSKTAIETH 255
           +PEK+    F ++R +    GND +   Y         T+  +++AC      +T ++ H
Sbjct: 86  VPEKS----FDFYRRIL-SSGNDLKPDNY---------TVNFLVQACTGLRMRETGLQVH 145

Query: 256 ARIIKFGYGNYPTLITSLVSTYQHAGYLNRVHQLLDLLCSKHLDLVAMNLLIENFMKIRE 315
              I+ G+ N P + T L+S Y   G L+  H++ + +     D V    ++    +  +
Sbjct: 146 GMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCP--DFVCRTAMVTACARCGD 205

Query: 316 SKLAEKVFYIMPYRDVVTWNSIIGGCVKNAWYGKAFKFFRQMLISNIQPDGFTFASILNA 375
              A K+F  MP RD + WN++I G  +     +A   F  M +  ++ +G    S+L+A
Sbjct: 206 VVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSA 265

Query: 376 CAKLGALSNTQWVHALMTQKKIELNSILISALIDAYSKCGSIQIAKEIFTSVPHNDISVW 435
           C +LGAL   +W H+ + + KI++   L + L+D Y+KCG ++ A E+F  +   ++  W
Sbjct: 266 CTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTW 325

Query: 436 NAMIKGLAIHGLAMDALLVFSMMERENVLPDAVTFLGILTACNHGGVIEEGRRYFDWMKS 495
           ++ + GLA++G     L +FS+M+++ V P+AVTF+ +L  C+  G ++EG+R+FD M++
Sbjct: 326 SSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRN 385

Query: 496 RYSIQPQLEHYGVMVDLYSRAGFLEEAYSIIMSMPIEPDVVTWRTLLSGCRIYRNQELAE 555
            + I+PQLEHYG +VDLY+RAG LE+A SII  MP++P    W +LL   R+Y+N EL  
Sbjct: 386 EFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGV 445

Query: 556 VAIANMSHRKS---GDYVLLSNIYCSLNRWEHAETVREMMKNKGVRKICGKSWIELAGTI 615
           +A   M   ++   G YVLLSNIY   N W++   VR+ MK+KGVRK  G S +E+ G +
Sbjct: 446 LASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEV 505

Query: 616 QNFKSGDRSHP---EIDAVYKVLGSLMKKTRAEGYMPVTELVFMDISEEEKEENLSFHSE 675
             F  GD+SHP   +IDAV+K    + ++ R  GY   T  V  DI EEEKE+ L  HSE
Sbjct: 506 HEFFVGDKSHPKYTQIDAVWK---DISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHSE 565

Query: 676 KLALAYAILKTSPGVKINISKNLRICDDCHRWIKLVSKLLCRVIVVRDRIRFHQFEGGMC 735
           K A+A+ I+     V I I KNLR+C DCH+   ++SK+  R I+VRDR RFH F+ G C
Sbjct: 566 KAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGHC 612

The following BLAST results are available for this feature:

BLAST of Spg007656 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879432.1	2.2e-256	86.34	pentatricopeptide repeat-containing protein At5g50990 isoform X1 [Benincasa hisp...	[more]
XP_022988253.1	2.3e-253	85.74	pentatricopeptide repeat-containing protein At5g50990 isoform X1 [Cucurbita maxi...	[more]
XP_022988254.1	2.3e-253	85.74	pentatricopeptide repeat-containing protein At5g50990 isoform X2 [Cucurbita maxi...	[more]
XP_022922012.1	3.9e-253	86.14	pentatricopeptide repeat-containing protein At5g50990 isoform X1 [Cucurbita mosc...	[more]
XP_022922013.1	3.9e-253	86.14	pentatricopeptide repeat-containing protein At5g50990 isoform X2 [Cucurbita mosc...	[more]

BLAST of Spg007656 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FI49	2.1e-164	55.98	Pentatricopeptide repeat-containing protein At5g50990 OS=Arabidopsis thaliana OX...	[more]
Q683I9	3.3e-109	41.67	Pentatricopeptide repeat-containing protein At3g62890 OS=Arabidopsis thaliana OX...	[more]
Q9FI80	1.2e-108	39.85	Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX...	[more]
Q9FJY7	1.2e-106	36.70	Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX...	[more]
Q9FND7	3.4e-106	37.55	Putative pentatricopeptide repeat-containing protein At5g40405 OS=Arabidopsis th...	[more]

BLAST of Spg007656 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JL20	1.1e-253	85.74	pentatricopeptide repeat-containing protein At5g50990 isoform X2 OS=Cucurbita ma...	[more]
A0A6J1JLQ2	1.1e-253	85.74	pentatricopeptide repeat-containing protein At5g50990 isoform X1 OS=Cucurbita ma...	[more]
A0A6J1E1Y0	1.9e-253	86.14	pentatricopeptide repeat-containing protein At5g50990 isoform X1 OS=Cucurbita mo...	[more]
A0A6J1E5D9	1.9e-253	86.14	pentatricopeptide repeat-containing protein At5g50990 isoform X2 OS=Cucurbita mo...	[more]
A0A6J1BZT0	4.2e-253	83.82	pentatricopeptide repeat-containing protein At5g50990 isoform X2 OS=Momordica ch...	[more]

BLAST of Spg007656 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G50990.1	1.5e-165	55.98	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G62890.1	2.3e-110	41.67	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G48910.1	8.8e-110	39.85	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G66520.1	8.2e-108	36.70	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G40405.1	2.4e-107	37.55	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 571..597 e-value: 0.11 score: 12.8 coord: 405..424 e-value: 0.89 score: 9.9 coord: 505..529 e-value: 0.012 score: 15.8
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 332..365 e-value: 5.3E-7 score: 27.4 coord: 434..467 e-value: 4.8E-5 score: 21.3
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 431..477 e-value: 1.4E-7 score: 31.6 coord: 329..378 e-value: 5.7E-12 score: 45.7
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 330..364 score: 11.542307
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 431..465 score: 10.468099
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 226..386 e-value: 3.7E-20 score: 74.0
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 431..623 e-value: 1.5E-30 score: 108.7
IPR032867	DYW domain	PFAM	PF14432	DYW_deaminase	coord: 602..725 e-value: 9.0E-35 score: 119.3
None	No IPR available	PANTHER	PTHR24015	OS07G0578800 PROTEIN-RELATED	coord: 229..680
None	No IPR available	PANTHER	PTHR24015:SF297	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 229..680

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg007656.1	Spg007656.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009451	RNA modification
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008270	zinc ion binding