Spg007638 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg007638
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	ABC transporter F family member 4-like
Location	scaffold2: 241656 .. 242691 (-)
RNA-Seq Expression	Spg007638
Synteny	Spg007638

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGTGTGGAAACTCCAAGCTTAACCCGGAAGGAGACTTGCTTCCTCCCAGGATTCGCCCGCTTCTTCACCGCACTAAATTCATGGAGTTCAGGAAACGTAAGAATGGAATCAATGATCTTAGAGATGGAACTCTCTCCAAGAAAGTGCTTCTCAAAGATGGAGAGTTAGAGGAAGAGAACTCACTTACCAAGAGCGTGTCTTCTTCACCCAACGACAGCCTGAATTCTTTGGCCTCACGGCAACACAGCAAACAGGACAAGGATGAAGATTCAGCCATTCCCCTGTCTAACAATAACAATGCAGTCAAAGATGCTACACAAAGCAACCTCCCCTTGGAGGAGGAGGAGCCTCTACCACACCTGCAATTGAATGCTACCAGTACCCACCCTGATGAGCCCAAACACAACAAACAAGTCAAAACCATGGAACAACATAAATGTATTGAACAAGGAGATGAAGACAAGAAACCAGAAGAAGAGGCTAGGCTTGACAACGAAGATAATCAGCGCTTAATCTGTCCTGGATCCCCCAGTTTCAGAGTTTATTTTGTTGAAGAAACAAATAATGACAAAGAAAATGGTAAGTCAAAACAAAAAAAGGAAAAAATTTCAAGCCAAATAACAAAATCCATTTTACATCCATTGTGTATTATGACCAAAACAGTAACATATTGTGCAGCAGAAATGACAGATGCAGGTATGGAAAATGTCTCACACAAAAAGTCGCCAAGTCATGAAAGTGTCGAGTGCGCCATTAGTGCAAAATTTGGCGAGGTTAGCCCACTTCTTCAACTTTAGAAGATTTGGTATTTGGGATTTCTGATGTGTTTCTCTCATTGGTTTCATTTACATCTGACACTAACAGGGCCAGGAGAACAAGACGATAAAGAAAGGAAAAAAAGGAACGAGTTGCGGTAAGAAAAAACCAGTCAAAGTTGGAGTAAAGAATCTGTTGAATGTTAAATCTTGCTATCATTTAAGTTGTTCTGGCCATGACCGAGCCAGTCTTCTAGCTAGAAAAGCTGAAGCTTAA

mRNA sequence

ATGGGGTGTGGAAACTCCAAGCTTAACCCGGAAGGAGACTTGCTTCCTCCCAGGATTCGCCCGCTTCTTCACCGCACTAAATTCATGGAGTTCAGGAAACGTAAGAATGGAATCAATGATCTTAGAGATGGAACTCTCTCCAAGAAAGTGCTTCTCAAAGATGGAGAGTTAGAGGAAGAGAACTCACTTACCAAGAGCGTGTCTTCTTCACCCAACGACAGCCTGAATTCTTTGGCCTCACGGCAACACAGCAAACAGGACAAGGATGAAGATTCAGCCATTCCCCTGTCTAACAATAACAATGCAGTCAAAGATGCTACACAAAGCAACCTCCCCTTGGAGGAGGAGGAGCCTCTACCACACCTGCAATTGAATGCTACCAGTACCCACCCTGATGAGCCCAAACACAACAAACAAGTCAAAACCATGGAACAACATAAATGTATTGAACAAGGAGATGAAGACAAGAAACCAGAAGAAGAGGCTAGGCTTGACAACGAAGATAATCAGCGCTTAATCTGTCCTGGATCCCCCAGTTTCAGAGTTTATTTTGTTGAAGAAACAAATAATGACAAAGAAAATGCAGAAATGACAGATGCAGGTATGGAAAATGTCTCACACAAAAAGTCGCCAAGTCATGAAAGTGTCGAGTGCGCCATTAGTGCAAAATTTGGCGAGGGCCAGGAGAACAAGACGATAAAGAAAGGAAAAAAAGGAACGAGTTGCGGTAAGAAAAAACCAGTCAAAGTTGGAGTAAAGAATCTGTTGAATGTTAAATCTTGCTATCATTTAAGTTGTTCTGGCCATGACCGAGCCAGTCTTCTAGCTAGAAAAGCTGAAGCTTAA

Coding sequence (CDS)

ATGGGGTGTGGAAACTCCAAGCTTAACCCGGAAGGAGACTTGCTTCCTCCCAGGATTCGCCCGCTTCTTCACCGCACTAAATTCATGGAGTTCAGGAAACGTAAGAATGGAATCAATGATCTTAGAGATGGAACTCTCTCCAAGAAAGTGCTTCTCAAAGATGGAGAGTTAGAGGAAGAGAACTCACTTACCAAGAGCGTGTCTTCTTCACCCAACGACAGCCTGAATTCTTTGGCCTCACGGCAACACAGCAAACAGGACAAGGATGAAGATTCAGCCATTCCCCTGTCTAACAATAACAATGCAGTCAAAGATGCTACACAAAGCAACCTCCCCTTGGAGGAGGAGGAGCCTCTACCACACCTGCAATTGAATGCTACCAGTACCCACCCTGATGAGCCCAAACACAACAAACAAGTCAAAACCATGGAACAACATAAATGTATTGAACAAGGAGATGAAGACAAGAAACCAGAAGAAGAGGCTAGGCTTGACAACGAAGATAATCAGCGCTTAATCTGTCCTGGATCCCCCAGTTTCAGAGTTTATTTTGTTGAAGAAACAAATAATGACAAAGAAAATGCAGAAATGACAGATGCAGGTATGGAAAATGTCTCACACAAAAAGTCGCCAAGTCATGAAAGTGTCGAGTGCGCCATTAGTGCAAAATTTGGCGAGGGCCAGGAGAACAAGACGATAAAGAAAGGAAAAAAAGGAACGAGTTGCGGTAAGAAAAAACCAGTCAAAGTTGGAGTAAAGAATCTGTTGAATGTTAAATCTTGCTATCATTTAAGTTGTTCTGGCCATGACCGAGCCAGTCTTCTAGCTAGAAAAGCTGAAGCTTAA

Protein sequence

MGCGNSKLNPEGDLLPPRIRPLLHRTKFMEFRKRKNGINDLRDGTLSKKVLLKDGELEEENSLTKSVSSSPNDSLNSLASRQHSKQDKDEDSAIPLSNNNNAVKDATQSNLPLEEEEPLPHLQLNATSTHPDEPKHNKQVKTMEQHKCIEQGDEDKKPEEEARLDNEDNQRLICPGSPSFRVYFVEETNNDKENAEMTDAGMENVSHKKSPSHESVECAISAKFGEGQENKTIKKGKKGTSCGKKKPVKVGVKNLLNVKSCYHLSCSGHDRASLLARKAEA

Homology

[Close]

BLAST of Spg007638 vs. NCBI nr
Match: XP_008464387.1 (PREDICTED: uncharacterized protein LOC103502290 [Cucumis melo])

HSP 1 Score: 308.1 bits (788), Expect = 7.6e-80
Identity = 188/296 (63.51%), Postives = 221/296 (74.66%), Query Frame = 0


Query: 1   MGCGNSKLNPEGDLLPPRIRPLLHRTKFMEFRKRKNGINDLRDGTLSKKVLLKDGELEEE 60
           MGCGNSKLNPEG+L+PPRIRPLL R KF+E RKRKNG + LRDG LSKKVLLK+GE EEE
Sbjct: 7   MGCGNSKLNPEGELVPPRIRPLLVRNKFLELRKRKNGTH-LRDGALSKKVLLKEGESEEE 66

Query: 61  NSLTKSVSSSPNDSLNSLASRQH-----SKQDKDEDSAIPLSNNN-NAVKDATQSNLPLE 120
           N++    +     S   LAS+QH     +K + +  S IP SNN+ NA K+  QSN  L 
Sbjct: 67  NAMFVD-NRHECGSTKCLASQQHTINNATKDEHNSASTIPPSNNDANATKNGEQSNRIL- 126

Query: 121 EEEPLPHLQLNATSTHPDEPK--HNKQVKTMEQHKCIEQGDEDKKPE-EEARLDNEDNQ- 180
           EEEP PH+QL   +THPD+      KQ KTM +HKCI++GDE+ K E E+ R DNE+N+ 
Sbjct: 127 EEEPRPHIQLK--TTHPDDTPVLELKQDKTMNEHKCIQEGDENNKKEGEDGRPDNEENRG 186

Query: 181 RLICPGSPSFRVYFVEETNNDKENAEMTDA-GMENVSHKKSPSHESVECAISAKFGEGQE 240
            +ICPGSPSFR YFVEET +DKE  EM DA GM +VSHKKSPSH+SVE   SAK GEGQE
Sbjct: 187 SIICPGSPSFRFYFVEETQDDKEKVEMKDAGGMGDVSHKKSPSHDSVESTTSAKSGEGQE 246

Query: 241 NKTIKKGKKGTS----CGKKKPVKVGVKNLLNVKSCYHLSCSGHDRASLLARKAEA 282
           NK IKKGKKGT+      K++PV VGVKNLLNVKSCYHLSCSG+DRA+LLARKAEA
Sbjct: 247 NKVIKKGKKGTTFNRVISKRRPVSVGVKNLLNVKSCYHLSCSGNDRANLLARKAEA 297

[Close]

BLAST of Spg007638 vs. NCBI nr
Match: KAA0057746.1 (ABC transporter F family member 4-like [Cucumis melo var. makuwa] >TYJ98429.1 ABC transporter F family member 4-like [Cucumis melo var. makuwa])

HSP 1 Score: 308.1 bits (788), Expect = 7.6e-80
Identity = 188/296 (63.51%), Postives = 221/296 (74.66%), Query Frame = 0


Query: 1   MGCGNSKLNPEGDLLPPRIRPLLHRTKFMEFRKRKNGINDLRDGTLSKKVLLKDGELEEE 60
           MGCGNSKLNPEG+L+PPRIRPLL R KF+E RKRKNG + LRDG LSKKVLLK+GE EEE
Sbjct: 1   MGCGNSKLNPEGELVPPRIRPLLVRNKFLELRKRKNGTH-LRDGALSKKVLLKEGESEEE 60

Query: 61  NSLTKSVSSSPNDSLNSLASRQH-----SKQDKDEDSAIPLSNNN-NAVKDATQSNLPLE 120
           N++    +     S   LAS+QH     +K + +  S IP SNN+ NA K+  QSN  L 
Sbjct: 61  NAMFVD-NRHECGSTKCLASQQHTINNATKDEHNSASTIPPSNNDANATKNGEQSNRIL- 120

Query: 121 EEEPLPHLQLNATSTHPDEPK--HNKQVKTMEQHKCIEQGDEDKKPE-EEARLDNEDNQ- 180
           EEEP PH+QL   +THPD+      KQ KTM +HKCI++GDE+ K E E+ R DNE+N+ 
Sbjct: 121 EEEPRPHIQLK--TTHPDDTPVLELKQDKTMNEHKCIQEGDENNKKEGEDGRPDNEENRG 180

Query: 181 RLICPGSPSFRVYFVEETNNDKENAEMTDA-GMENVSHKKSPSHESVECAISAKFGEGQE 240
            +ICPGSPSFR YFVEET +DKE  EM DA GM +VSHKKSPSH+SVE   SAK GEGQE
Sbjct: 181 SIICPGSPSFRFYFVEETQDDKEKVEMKDAGGMGDVSHKKSPSHDSVESTTSAKSGEGQE 240

Query: 241 NKTIKKGKKGTS----CGKKKPVKVGVKNLLNVKSCYHLSCSGHDRASLLARKAEA 282
           NK IKKGKKGT+      K++PV VGVKNLLNVKSCYHLSCSG+DRA+LLARKAEA
Sbjct: 241 NKVIKKGKKGTTFNRVISKRRPVSVGVKNLLNVKSCYHLSCSGNDRANLLARKAEA 291

[Close]

BLAST of Spg007638 vs. NCBI nr
Match: XP_011649820.1 (probable DNA-directed RNA polymerase I subunit RPA43 isoform X1 [Cucumis sativus])

HSP 1 Score: 293.9 bits (751), Expect = 1.5e-75
Identity = 185/297 (62.29%), Postives = 214/297 (72.05%), Query Frame = 0


Query: 1   MGCGNSKLNPEGDLLPPRIRPLLHRTKFMEFRKRKNGINDLRDGTLSKKVLLKDGELEEE 60
           MGCGNSKLNP G+L+PPRIRPL  R K +E RKRKNG + LRDG LSKKVLLKDGE EEE
Sbjct: 1   MGCGNSKLNPGGELVPPRIRPLHVRNKLLELRKRKNGTH-LRDGALSKKVLLKDGESEEE 60

Query: 61  NSLTKSVSSSPNDSLNSLASRQH------SKQDKDEDSAIPLSNNN-NAVKDATQSNLPL 120
           N++    +     S   LAS+QH      +K + +  S IP SNNN +A K   QSN  L
Sbjct: 61  NAMHVD-NRHECGSTKCLASQQHTNNNNATKDEHNSASTIPPSNNNASATKTGEQSNHIL 120

Query: 121 EEEEPLPHLQLNATSTHPDEPK--HNKQVKTMEQHKCIEQGDEDKKPE-EEARLDNEDNQ 180
            EEEP PH+QL A  THPD+      KQ KTM +HKCI++GDE+ K E E+ R DNE+N+
Sbjct: 121 -EEEPQPHIQLKA--THPDDTPVLELKQDKTMNEHKCIQEGDENNKKEGEDGRPDNEENR 180

Query: 181 -RLICPGSPSFRVYFVEETNNDKENAEMTDA-GMENVSHKKSPSHESVECAISAKFGEGQ 240
              ICPGSPSFR+YFVEET +DKE  EM DA GM +VSHKKSPS +SVE   SAK  EGQ
Sbjct: 181 GSFICPGSPSFRLYFVEETQDDKEKVEMKDASGMGDVSHKKSPSRDSVESTTSAKCDEGQ 240

Query: 241 ENKTIKKGKKGTS----CGKKKPVKVGVKNLLNVKSCYHLSCSGHDRASLLARKAEA 282
           ENK IKKGKK T+      KK+PV VGVKNLLNVKSCYHLSCSG+DRA+LLARKAEA
Sbjct: 241 ENKAIKKGKKETTFNRVVSKKRPVSVGVKNLLNVKSCYHLSCSGNDRANLLARKAEA 292

[Close]

BLAST of Spg007638 vs. NCBI nr
Match: XP_022921428.1 (uncharacterized protein LOC111429712 [Cucurbita moschata])

HSP 1 Score: 231.5 bits (589), Expect = 9.0e-57
Identity = 154/294 (52.38%), Postives = 190/294 (64.63%), Query Frame = 0


Query: 1   MGCGNSKLNPEGDLLPPRIRPLLHRTKFMEFRKRKNGINDLRDGTLSKKVLLKDGELEEE 60
           MGCGNSKL PEG+ + P IRPLL RTKF EFRKRKNG + LR+  LSKKVLLK+GE+EEE
Sbjct: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTH-LRETALSKKVLLKEGEIEEE 60

Query: 61  NSLTKSVSSSPNDSLNSLASRQ-------HSKQDKDEDSAIPLSNNNNAVKDATQSNLPL 120
           NS+       P  + NS+           H+KQ+   D             D+  +N  L
Sbjct: 61  NSIL------PVHNRNSIYGSHDGKTICLHTKQENHMDE-----------HDSPNANHLL 120

Query: 121 EEEEPLPHLQLNATSTHPDEPKHNKQVKTMEQHKCIEQGDEDKKPE-EEARLDNEDNQRL 180
           E+ +P      N   T   E K NK +    Q   +E+GD++ K E EE R DNEDN+ L
Sbjct: 121 EQHKP------NDNGTRV-ELKENKTMN--NQRTAVEEGDDENKEEGEEGRPDNEDNRCL 180

Query: 181 ICPGSPSFRVYFVEETNNDKENAEMTDAG-MENVSHKKSPSHESVECAISAKFGEGQENK 240
           ICPGSPSFRVYFVE+T NDK+N EM D G ME+ S KKSPS +SVE + S K  EGQENK
Sbjct: 181 ICPGSPSFRVYFVEQTPNDKQNVEMNDDGDMEDASLKKSPSRDSVESSSSTKSNEGQENK 240

Query: 241 TIKKGKKGTSC----GKKKPVKVGVKNLLNVKS-CYHLSCSGHDRASLLARKAE 281
           TIKKGKKGT+      +++PV VG+K+LLNV + CYHLSC+G+DR + LARKAE
Sbjct: 241 TIKKGKKGTTLNRAGSRERPVGVGLKSLLNVNNCCYHLSCTGNDRVNHLARKAE 267

[Close]

BLAST of Spg007638 vs. NCBI nr
Match: XP_022988605.1 (uncharacterized protein LOC111485806 isoform X2 [Cucurbita maxima])

HSP 1 Score: 226.1 bits (575), Expect = 3.8e-55
Identity = 152/290 (52.41%), Postives = 187/290 (64.48%), Query Frame = 0


Query: 1   MGCGNSKLNPEGDLLPPRIRPLLHRTKFMEFRKRKNGINDLRDGTLSKKVLLKDGELEEE 60
           MGCGNSKL PEG+ + P IRPLL RTKF EFRKRKNG + LRD  LSKKVLL +GE+EEE
Sbjct: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTH-LRDTALSKKVLLTEGEIEEE 60

Query: 61  NS-LTKSVSSSPNDSLNSLASRQHSKQDKDEDSAIPLSNNNNAVKDATQSNLPLEEEEPL 120
           NS L     +    S +      H+KQ+  +D             D+  +N PLE+ +P 
Sbjct: 61  NSILAVHNRNCIYGSHDGKTICLHTKQENHKDE-----------HDSPNANHPLEQHKP- 120

Query: 121 PHLQLNATSTHPDEPKHNKQVKTM-EQHKCIEQGDEDKKPE-EEARLDNEDNQRLICPGS 180
                N   T        K+ KTM  QHK +E+GD++ K E EE R DNEDN+ LICPGS
Sbjct: 121 -----NDNGTR----VKLKEDKTMNNQHKAVEEGDDESKGEGEEGRPDNEDNRCLICPGS 180

Query: 181 PSFRVYFVEETNNDKENAEMTDAG-MENVSHKKSPSHESVECAISAKFGEGQENKTIKKG 240
           PSFRVYFVE+T N+K+N EM D G ME+ S KKSPS +SVE   S K  E QE KTIKKG
Sbjct: 181 PSFRVYFVEQTPNEKQNVEMNDDGDMEDASLKKSPSRDSVESTSSTKSNECQEKKTIKKG 240

Query: 241 KKGTSC----GKKKPVKVGVKNLLNVKS-CYHLSCSGHDRASLLARKAEA 282
           KKGT+      +K+PV VG+K+LLNV + CYHLSC+G+DR + L  KAE+
Sbjct: 241 KKGTTLNRAGSRKRPVGVGLKSLLNVNNCCYHLSCTGNDRGNHLPIKAES 268

[Close]

BLAST of Spg007638 vs. ExPASy TrEMBL
Match: A0A5D3BHA4 (ABC transporter F family member 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00270 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 3.7e-80
Identity = 188/296 (63.51%), Postives = 221/296 (74.66%), Query Frame = 0


Query: 1   MGCGNSKLNPEGDLLPPRIRPLLHRTKFMEFRKRKNGINDLRDGTLSKKVLLKDGELEEE 60
           MGCGNSKLNPEG+L+PPRIRPLL R KF+E RKRKNG + LRDG LSKKVLLK+GE EEE
Sbjct: 1   MGCGNSKLNPEGELVPPRIRPLLVRNKFLELRKRKNGTH-LRDGALSKKVLLKEGESEEE 60

Query: 61  NSLTKSVSSSPNDSLNSLASRQH-----SKQDKDEDSAIPLSNNN-NAVKDATQSNLPLE 120
           N++    +     S   LAS+QH     +K + +  S IP SNN+ NA K+  QSN  L 
Sbjct: 61  NAMFVD-NRHECGSTKCLASQQHTINNATKDEHNSASTIPPSNNDANATKNGEQSNRIL- 120

Query: 121 EEEPLPHLQLNATSTHPDEPK--HNKQVKTMEQHKCIEQGDEDKKPE-EEARLDNEDNQ- 180
           EEEP PH+QL   +THPD+      KQ KTM +HKCI++GDE+ K E E+ R DNE+N+ 
Sbjct: 121 EEEPRPHIQLK--TTHPDDTPVLELKQDKTMNEHKCIQEGDENNKKEGEDGRPDNEENRG 180

Query: 181 RLICPGSPSFRVYFVEETNNDKENAEMTDA-GMENVSHKKSPSHESVECAISAKFGEGQE 240
            +ICPGSPSFR YFVEET +DKE  EM DA GM +VSHKKSPSH+SVE   SAK GEGQE
Sbjct: 181 SIICPGSPSFRFYFVEETQDDKEKVEMKDAGGMGDVSHKKSPSHDSVESTTSAKSGEGQE 240

Query: 241 NKTIKKGKKGTS----CGKKKPVKVGVKNLLNVKSCYHLSCSGHDRASLLARKAEA 282
           NK IKKGKKGT+      K++PV VGVKNLLNVKSCYHLSCSG+DRA+LLARKAEA
Sbjct: 241 NKVIKKGKKGTTFNRVISKRRPVSVGVKNLLNVKSCYHLSCSGNDRANLLARKAEA 291

[Close]

BLAST of Spg007638 vs. ExPASy TrEMBL
Match: A0A1S3CLT6 (uncharacterized protein LOC103502290 OS=Cucumis melo OX=3656 GN=LOC103502290 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 3.7e-80
Identity = 188/296 (63.51%), Postives = 221/296 (74.66%), Query Frame = 0


Query: 1   MGCGNSKLNPEGDLLPPRIRPLLHRTKFMEFRKRKNGINDLRDGTLSKKVLLKDGELEEE 60
           MGCGNSKLNPEG+L+PPRIRPLL R KF+E RKRKNG + LRDG LSKKVLLK+GE EEE
Sbjct: 7   MGCGNSKLNPEGELVPPRIRPLLVRNKFLELRKRKNGTH-LRDGALSKKVLLKEGESEEE 66

Query: 61  NSLTKSVSSSPNDSLNSLASRQH-----SKQDKDEDSAIPLSNNN-NAVKDATQSNLPLE 120
           N++    +     S   LAS+QH     +K + +  S IP SNN+ NA K+  QSN  L 
Sbjct: 67  NAMFVD-NRHECGSTKCLASQQHTINNATKDEHNSASTIPPSNNDANATKNGEQSNRIL- 126

Query: 121 EEEPLPHLQLNATSTHPDEPK--HNKQVKTMEQHKCIEQGDEDKKPE-EEARLDNEDNQ- 180
           EEEP PH+QL   +THPD+      KQ KTM +HKCI++GDE+ K E E+ R DNE+N+ 
Sbjct: 127 EEEPRPHIQLK--TTHPDDTPVLELKQDKTMNEHKCIQEGDENNKKEGEDGRPDNEENRG 186

Query: 181 RLICPGSPSFRVYFVEETNNDKENAEMTDA-GMENVSHKKSPSHESVECAISAKFGEGQE 240
            +ICPGSPSFR YFVEET +DKE  EM DA GM +VSHKKSPSH+SVE   SAK GEGQE
Sbjct: 187 SIICPGSPSFRFYFVEETQDDKEKVEMKDAGGMGDVSHKKSPSHDSVESTTSAKSGEGQE 246

Query: 241 NKTIKKGKKGTS----CGKKKPVKVGVKNLLNVKSCYHLSCSGHDRASLLARKAEA 282
           NK IKKGKKGT+      K++PV VGVKNLLNVKSCYHLSCSG+DRA+LLARKAEA
Sbjct: 247 NKVIKKGKKGTTFNRVISKRRPVSVGVKNLLNVKSCYHLSCSGNDRANLLARKAEA 297

[Close]

BLAST of Spg007638 vs. ExPASy TrEMBL
Match: A0A0A0LNT2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G000760 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 7.2e-76
Identity = 185/297 (62.29%), Postives = 214/297 (72.05%), Query Frame = 0


Query: 1   MGCGNSKLNPEGDLLPPRIRPLLHRTKFMEFRKRKNGINDLRDGTLSKKVLLKDGELEEE 60
           MGCGNSKLNP G+L+PPRIRPL  R K +E RKRKNG + LRDG LSKKVLLKDGE EEE
Sbjct: 1   MGCGNSKLNPGGELVPPRIRPLHVRNKLLELRKRKNGTH-LRDGALSKKVLLKDGESEEE 60

Query: 61  NSLTKSVSSSPNDSLNSLASRQH------SKQDKDEDSAIPLSNNN-NAVKDATQSNLPL 120
           N++    +     S   LAS+QH      +K + +  S IP SNNN +A K   QSN  L
Sbjct: 61  NAMHVD-NRHECGSTKCLASQQHTNNNNATKDEHNSASTIPPSNNNASATKTGEQSNHIL 120

Query: 121 EEEEPLPHLQLNATSTHPDEPK--HNKQVKTMEQHKCIEQGDEDKKPE-EEARLDNEDNQ 180
            EEEP PH+QL A  THPD+      KQ KTM +HKCI++GDE+ K E E+ R DNE+N+
Sbjct: 121 -EEEPQPHIQLKA--THPDDTPVLELKQDKTMNEHKCIQEGDENNKKEGEDGRPDNEENR 180

Query: 181 -RLICPGSPSFRVYFVEETNNDKENAEMTDA-GMENVSHKKSPSHESVECAISAKFGEGQ 240
              ICPGSPSFR+YFVEET +DKE  EM DA GM +VSHKKSPS +SVE   SAK  EGQ
Sbjct: 181 GSFICPGSPSFRLYFVEETQDDKEKVEMKDASGMGDVSHKKSPSRDSVESTTSAKCDEGQ 240

Query: 241 ENKTIKKGKKGTS----CGKKKPVKVGVKNLLNVKSCYHLSCSGHDRASLLARKAEA 282
           ENK IKKGKK T+      KK+PV VGVKNLLNVKSCYHLSCSG+DRA+LLARKAEA
Sbjct: 241 ENKAIKKGKKETTFNRVVSKKRPVSVGVKNLLNVKSCYHLSCSGNDRANLLARKAEA 292

[Close]

BLAST of Spg007638 vs. ExPASy TrEMBL
Match: A0A6J1E3W4 (uncharacterized protein LOC111429712 OS=Cucurbita moschata OX=3662 GN=LOC111429712 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 4.4e-57
Identity = 154/294 (52.38%), Postives = 190/294 (64.63%), Query Frame = 0


Query: 1   MGCGNSKLNPEGDLLPPRIRPLLHRTKFMEFRKRKNGINDLRDGTLSKKVLLKDGELEEE 60
           MGCGNSKL PEG+ + P IRPLL RTKF EFRKRKNG + LR+  LSKKVLLK+GE+EEE
Sbjct: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTH-LRETALSKKVLLKEGEIEEE 60

Query: 61  NSLTKSVSSSPNDSLNSLASRQ-------HSKQDKDEDSAIPLSNNNNAVKDATQSNLPL 120
           NS+       P  + NS+           H+KQ+   D             D+  +N  L
Sbjct: 61  NSIL------PVHNRNSIYGSHDGKTICLHTKQENHMDE-----------HDSPNANHLL 120

Query: 121 EEEEPLPHLQLNATSTHPDEPKHNKQVKTMEQHKCIEQGDEDKKPE-EEARLDNEDNQRL 180
           E+ +P      N   T   E K NK +    Q   +E+GD++ K E EE R DNEDN+ L
Sbjct: 121 EQHKP------NDNGTRV-ELKENKTMN--NQRTAVEEGDDENKEEGEEGRPDNEDNRCL 180

Query: 181 ICPGSPSFRVYFVEETNNDKENAEMTDAG-MENVSHKKSPSHESVECAISAKFGEGQENK 240
           ICPGSPSFRVYFVE+T NDK+N EM D G ME+ S KKSPS +SVE + S K  EGQENK
Sbjct: 181 ICPGSPSFRVYFVEQTPNDKQNVEMNDDGDMEDASLKKSPSRDSVESSSSTKSNEGQENK 240

Query: 241 TIKKGKKGTSC----GKKKPVKVGVKNLLNVKS-CYHLSCSGHDRASLLARKAE 281
           TIKKGKKGT+      +++PV VG+K+LLNV + CYHLSC+G+DR + LARKAE
Sbjct: 241 TIKKGKKGTTLNRAGSRERPVGVGLKSLLNVNNCCYHLSCTGNDRVNHLARKAE 267

[Close]

BLAST of Spg007638 vs. ExPASy TrEMBL
Match: A0A6J1JK15 (uncharacterized protein LOC111485806 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485806 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 1.8e-55
Identity = 152/290 (52.41%), Postives = 187/290 (64.48%), Query Frame = 0


Query: 1   MGCGNSKLNPEGDLLPPRIRPLLHRTKFMEFRKRKNGINDLRDGTLSKKVLLKDGELEEE 60
           MGCGNSKL PEG+ + P IRPLL RTKF EFRKRKNG + LRD  LSKKVLL +GE+EEE
Sbjct: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTH-LRDTALSKKVLLTEGEIEEE 60

Query: 61  NS-LTKSVSSSPNDSLNSLASRQHSKQDKDEDSAIPLSNNNNAVKDATQSNLPLEEEEPL 120
           NS L     +    S +      H+KQ+  +D             D+  +N PLE+ +P 
Sbjct: 61  NSILAVHNRNCIYGSHDGKTICLHTKQENHKDE-----------HDSPNANHPLEQHKP- 120

Query: 121 PHLQLNATSTHPDEPKHNKQVKTM-EQHKCIEQGDEDKKPE-EEARLDNEDNQRLICPGS 180
                N   T        K+ KTM  QHK +E+GD++ K E EE R DNEDN+ LICPGS
Sbjct: 121 -----NDNGTR----VKLKEDKTMNNQHKAVEEGDDESKGEGEEGRPDNEDNRCLICPGS 180

Query: 181 PSFRVYFVEETNNDKENAEMTDAG-MENVSHKKSPSHESVECAISAKFGEGQENKTIKKG 240
           PSFRVYFVE+T N+K+N EM D G ME+ S KKSPS +SVE   S K  E QE KTIKKG
Sbjct: 181 PSFRVYFVEQTPNEKQNVEMNDDGDMEDASLKKSPSRDSVESTSSTKSNECQEKKTIKKG 240

Query: 241 KKGTSC----GKKKPVKVGVKNLLNVKS-CYHLSCSGHDRASLLARKAEA 282
           KKGT+      +K+PV VG+K+LLNV + CYHLSC+G+DR + L  KAE+
Sbjct: 241 KKGTTLNRAGSRKRPVGVGLKSLLNVNNCCYHLSCTGNDRGNHLPIKAES 268

[Close]

BLAST of Spg007638 vs. TAIR 10
Match: AT5G50830.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; Has 4984 Blast hits to 3288 proteins in 342 species: Archae - 12; Bacteria - 257; Metazoa - 1366; Fungi - 452; Plants - 199; Viruses - 77; Other Eukaryotes - 2621 (source: NCBI BLink). )

HSP 1 Score: 57.4 bits (137), Expect = 2.2e-08
Identity = 93/309 (30.10%), Postives = 141/309 (45.63%), Query Frame = 0


Query: 1   MGCGNSKLN-------PEGDL--LPPRIRPLLHRTKFMEFRKRKNGINDLRDGTLSKKVL 60
           MGCG S+L         EG +  LP  IRPLL R +  E +KR +        TLSKK L
Sbjct: 1   MGCGGSRLGGVATTRAEEGGVVPLPAGIRPLLRR-RLEEMKKRSHAGVLKGSQTLSKKEL 60

Query: 61  LK-----DGELEEEN--SLTKSVSSSPNDSLNSLASRQHSKQDKDE--DSAIPLSNNNNA 120
           L+     DGE  EEN  SL  S   +P        +  H+ ++K E     IP  ++   
Sbjct: 61  LRHNSSEDGEDTEENDGSLKASAKVAP--------APDHNVEEKKEVIYEKIPSKDDVKE 120

Query: 121 VKDATQSNLPLEEEEPLPHLQLNATSTHPDEPKHNKQVKTMEQH---------KCIEQGD 180
           VK+    N   ++EE   H  +        E ++ + VK  E+             ++GD
Sbjct: 121 VKEEVVVN---KQEEDNHHQDV----VEKQEEENKEVVKKQEEENHDDDVVVINVKKEGD 180

Query: 181 EDKKPEEEARLDNEDNQRLICPGSPSFRVYFVE-ETNNDKENAEMTDAGMENVSHKKSPS 240
           + K  + +    N  ++R+I PGSPSFRVY V+  +++D E  ++ DA       +KS  
Sbjct: 181 DGKNHDVDEGSINNFDERMIGPGSPSFRVYCVDVPSDDDDEEKDVEDA-------RKSME 240

Query: 241 HESVECAISAKFGEGQENKTIKKGKKGTSCGKKKPVKVGVKNLLNVKS-CY-HLSCSGHD 280
            ESV   I       +E+ +I K +K    GK+  + +  K L NV + CY    C G+ 
Sbjct: 241 TESVTTEI-------KEDGSIVKKEKKERRGKRFGIALPRKYLANVTAPCYAGGGCMGNT 279

[Close]

BLAST of Spg007638 vs. TAIR 10
Match: AT5G50830.2 (unknown protein; Has 4750 Blast hits to 3160 proteins in 341 species: Archae - 14; Bacteria - 239; Metazoa - 1329; Fungi - 394; Plants - 197; Viruses - 79; Other Eukaryotes - 2498 (source: NCBI BLink). )

HSP 1 Score: 55.8 bits (133), Expect = 6.3e-08
Identity = 93/309 (30.10%), Postives = 139/309 (44.98%), Query Frame = 0


Query: 1   MGCGNSKLN-------PEGDL--LPPRIRPLLHRTKFMEFRKRKNGINDLRDGTLSKKVL 60
           MGCG S+L         EG +  LP  IRPLL R +  E +KR +        TLSKK L
Sbjct: 1   MGCGGSRLGGVATTRAEEGGVVPLPAGIRPLLRR-RLEEMKKRSHAGVLKGSQTLSKKEL 60

Query: 61  LK-----DGELEEEN--SLTKSVSSSPNDSLNSLASRQHSKQDKDE--DSAIPLSNNNNA 120
           L+     DGE  EEN  SL  S   +P        +  H+ ++K E     IP  ++   
Sbjct: 61  LRHNSSEDGEDTEENDGSLKASAKVAP--------APDHNVEEKKEVIYEKIPSKDDVKE 120

Query: 121 VKDATQSNLPLEEEEPLPHLQLNATSTHPDEPKHNKQVKTMEQH---------KCIEQGD 180
           VK+    N   ++EE   H  +        E ++ + VK  E+             ++GD
Sbjct: 121 VKEEVVVN---KQEEDNHHQDV----VEKQEEENKEVVKKQEEENHDDDVVVINVKKEGD 180

Query: 181 EDKKPEEEARLDNEDNQRLICPGSPSFRVYFVE-ETNNDKENAEMTDAGMENVSHKKSPS 240
           + K  + +    N  ++R+I PGSPSFRVY V+  +++D E  ++ DA       +KS  
Sbjct: 181 DGKNHDVDEGSINNFDERMIGPGSPSFRVYCVDVPSDDDDEEKDVEDA-------RKSME 240

Query: 241 HESVECAISAKFGEGQENKTIKKGKKGTSCGKKKPVKVGVKNLLNVKS-CY-HLSCSGHD 280
            ESV   I    G      +I K +K    GK+  + +  K L NV + CY    C G+ 
Sbjct: 241 TESVTTEIKEVDG------SIVKKEKKERRGKRFGIALPRKYLANVTAPCYAGGGCMGNT 280

The following BLAST results are available for this feature:

BLAST of Spg007638 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008464387.1	7.6e-80	63.51	PREDICTED: uncharacterized protein LOC103502290 [Cucumis melo]	[more]
KAA0057746.1	7.6e-80	63.51	ABC transporter F family member 4-like [Cucumis melo var. makuwa] >TYJ98429.1 AB...	[more]
XP_011649820.1	1.5e-75	62.29	probable DNA-directed RNA polymerase I subunit RPA43 isoform X1 [Cucumis sativus...	[more]
XP_022921428.1	9.0e-57	52.38	uncharacterized protein LOC111429712 [Cucurbita moschata]	[more]
XP_022988605.1	3.8e-55	52.41	uncharacterized protein LOC111485806 isoform X2 [Cucurbita maxima]	[more]

BLAST of Spg007638 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg007638 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BHA4	3.7e-80	63.51	ABC transporter F family member 4-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3CLT6	3.7e-80	63.51	uncharacterized protein LOC103502290 OS=Cucumis melo OX=3656 GN=LOC103502290 PE=...	[more]
A0A0A0LNT2	7.2e-76	62.29	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G000760 PE=4 SV=1	[more]
A0A6J1E3W4	4.4e-57	52.38	uncharacterized protein LOC111429712 OS=Cucurbita moschata OX=3662 GN=LOC1114297...	[more]
A0A6J1JK15	1.8e-55	52.41	uncharacterized protein LOC111485806 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Spg007638 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G50830.1	2.2e-08	30.10	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT5G50830.2	6.3e-08	30.10	unknown protein; Has 4750 Blast hits to 3160 proteins in 341 species: Archae - 1...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..168
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..172

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg007638.1	Spg007638.1	mRNA