Spg007627 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg007627
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic
Location	scaffold2: 144510 .. 145899 (+)
RNA-Seq Expression	Spg007627
Synteny	Spg007627

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAGAGTTCTGGTTCAGTCGACAAATATTCCTGGTTTGGTCGGTGGAAGAAAGAATGGCCTATCAAGGGGATCGGCAAATGTAAAACGGGCTGTTAAAATGATGGCCAGCGTACATGCACCTGGTTTGAGAATAAGAAATTTCTCTGGACTTAGAGGATTTAATTCTTTGGATAACATGTTGAGAACTGGACAAGATTTTCATTCCAAGATGGCCATCACAATCTCTTCTAGGCGACGAAAGGCTAGCAGATGTGTTCCAAAAGCCATGTTTGAGCGATTCACAGAAAAGGCAATCAAAGTTATCATGCTTGCCCAGGAGGAAGCGAGGCGCCTTGGTCACAATTTTGTTGGCACAGAGCAGATACTTTTAGGTCTTATTGGCGAAGGCACTGGTATCGCTGCTAAGGTTCTTAAATCTATGGGAATTAATCTTAAAGATGCGCGCGTGGAGGTGGAGAAGATAATTGGTCGGGGCAGTGGGTTTGTTGCTGTAGAAATTCCATTCACTCCTCGTGCAAAACGTGTTTTGGAACTTTCTCTCGAGGAAGCTCGCCAACTTGGTAACATCTCTTTCCCATCCCCCTCCTGCAAAAAAAAGAAGAAGAAGAAAAGGAACGAAACAGAACAGAGAATCAATTTGATTTCTCTCTGAATAGTTTATCAATTTCAAGTTTCTTCTTCATCTTCTTCTTATTATTATTATTGTTATTATGCATGTTTGTATTTTGTTTCTTCATTTAACATGAACTTCACCTCCCAAGGGCAGCTTTGTGGTAAGTAAGGGCTTGAGGCTTTGGTGGGAGTTTGACTCAAGATCATGGGTTCAAGTCTAGAATACTTAATAAGAGAGTTACTGTTGTCTCCTGGAGCTAATGTTGGAGCACACATAGTCTCTCCACGAAGTAGTAGGATGTTGCTCGTATACACGTGTATATATTTATATAAGCTTCATTTGACGCATGTTATAGCTATTGTACTTGGCTAGCATTCATAGAAGTATTCAGTTTTTCTTTCAACTTGAAAAATTTACACATTTCACTCTCTTCCATTTTTGTTTTGAACTGGAAGCATATTCATTGGCTCATAGCGCATAGCTAGAAGGGATGTCTGTGCGTGTGTATGGATCTTTGTGTCTATAGATATATAGGTCCACGTTCCATTAGATGGAGCCTGTCTTATGTATGCTGTTGGACTTCTTAACATTCTATTGACTACTAAACTTGCATGAATCTTATTTTGCTGAATTTTCAGGCCACAATTATATTGGGTCAGAGCACTTGCTTCTGGGACTACTTCGTGAAGGTGAGGGTGTTGCAGCTCGTGTTCTTGAAAACTTAGGTGCTGATCCTAGTAACATTCGCACTCAGGCAAGGATTTCATCCTGA

mRNA sequence

ATGGCTAGAGTTCTGGTTCAGTCGACAAATATTCCTGGTTTGGTCGGTGGAAGAAAGAATGGCCTATCAAGGGGATCGGCAAATGTAAAACGGGCTGTTAAAATGATGGCCAGCGTACATGCACCTGGTTTGAGAATAAGAAATTTCTCTGGACTTAGAGGATTTAATTCTTTGGATAACATGTTGAGAACTGGACAAGATTTTCATTCCAAGATGGCCATCACAATCTCTTCTAGGCGACGAAAGGCTAGCAGATGTGTTCCAAAAGCCATGTTTGAGCGATTCACAGAAAAGGCAATCAAAGTTATCATGCTTGCCCAGGAGGAAGCGAGGCGCCTTGGTCACAATTTTGTTGGCACAGAGCAGATACTTTTAGGTCTTATTGGCGAAGGCACTGGTATCGCTGCTAAGGTTCTTAAATCTATGGGAATTAATCTTAAAGATGCGCGCGTGGAGGTGGAGAAGATAATTGGTCGGGGCAGTGGGTTTGTTGCTGTAGAAATTCCATTCACTCCTCGTGCAAAACGTGTTTTGGAACTTTCTCTCGAGGAAGCTCGCCAACTTGGCCACAATTATATTGGGTCAGAGCACTTGCTTCTGGGACTACTTCGTGAAGGTGAGGGTGTTGCAGCTCGTGTTCTTGAAAACTTAGGTGCTGATCCTAGTAACATTCGCACTCAGGCAAGGATTTCATCCTGA

Coding sequence (CDS)

ATGGCTAGAGTTCTGGTTCAGTCGACAAATATTCCTGGTTTGGTCGGTGGAAGAAAGAATGGCCTATCAAGGGGATCGGCAAATGTAAAACGGGCTGTTAAAATGATGGCCAGCGTACATGCACCTGGTTTGAGAATAAGAAATTTCTCTGGACTTAGAGGATTTAATTCTTTGGATAACATGTTGAGAACTGGACAAGATTTTCATTCCAAGATGGCCATCACAATCTCTTCTAGGCGACGAAAGGCTAGCAGATGTGTTCCAAAAGCCATGTTTGAGCGATTCACAGAAAAGGCAATCAAAGTTATCATGCTTGCCCAGGAGGAAGCGAGGCGCCTTGGTCACAATTTTGTTGGCACAGAGCAGATACTTTTAGGTCTTATTGGCGAAGGCACTGGTATCGCTGCTAAGGTTCTTAAATCTATGGGAATTAATCTTAAAGATGCGCGCGTGGAGGTGGAGAAGATAATTGGTCGGGGCAGTGGGTTTGTTGCTGTAGAAATTCCATTCACTCCTCGTGCAAAACGTGTTTTGGAACTTTCTCTCGAGGAAGCTCGCCAACTTGGCCACAATTATATTGGGTCAGAGCACTTGCTTCTGGGACTACTTCGTGAAGGTGAGGGTGTTGCAGCTCGTGTTCTTGAAAACTTAGGTGCTGATCCTAGTAACATTCGCACTCAGGCAAGGATTTCATCCTGA

Protein sequence

MARVLVQSTNIPGLVGGRKNGLSRGSANVKRAVKMMASVHAPGLRIRNFSGLRGFNSLDNMLRTGQDFHSKMAITISSRRRKASRCVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQARISS

Homology

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BLAST of Spg007627 vs. NCBI nr
Match: XP_022134630.1 (ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic [Momordica charantia] >XP_022134631.1 ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic [Momordica charantia])

HSP 1 Score: 422.9 bits (1086), Expect = 1.7e-114
Identity = 218/227 (96.04%), Postives = 225/227 (99.12%), Query Frame = 0


Query: 1   MARVLVQSTNIPGLVGGRKNGLSRGSANVKRAVKMMASVHAPGLRIRNFSGLRGFNSLDN 60
           MARVLVQSTNIPGLVGGRKNG+SRGS NVKRAVKMMASVH+PGLRIR+FSGLRGFN+LDN
Sbjct: 1   MARVLVQSTNIPGLVGGRKNGISRGSGNVKRAVKMMASVHSPGLRIRSFSGLRGFNALDN 60

Query: 61  MLRTGQDFHSKMAITISSRRRKASRCVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGT 120
           MLRTG+DFHSKMAITISSRR KA+RCVP+AMFERFTEKAIKVIMLAQEEARRLGHNFVGT
Sbjct: 61  MLRTGRDFHSKMAITISSRRGKATRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVGT 120

Query: 121 EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL 180
           EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL
Sbjct: 121 EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL 180

Query: 181 SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQ 228
           SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQ
Sbjct: 181 SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQ 227

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BLAST of Spg007627 vs. NCBI nr
Match: XP_008464372.1 (PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic [Cucumis melo])

HSP 1 Score: 422.9 bits (1086), Expect = 1.7e-114
Identity = 221/228 (96.93%), Postives = 226/228 (99.12%), Query Frame = 0


Query: 1   MARVLVQSTNIPGLVGGRKNGL-SRGSANVKRAVKMMASVHAPGLRIRNFSGLRGFNSLD 60
           MARVLVQSTNIPGLVGGRKNGL SRGSA+VKRAVKMMA+ H+PGLRIRNFSGLRGFNSLD
Sbjct: 1   MARVLVQSTNIPGLVGGRKNGLTSRGSASVKRAVKMMATAHSPGLRIRNFSGLRGFNSLD 60

Query: 61  NMLRTGQDFHSKMAITISSRRRKASRCVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVG 120
           NMLR+GQDFHSKMAITISSRRRKASRCVP+AMFERFTEKAIKVIMLAQEEARRLGHNFVG
Sbjct: 61  NMLRSGQDFHSKMAITISSRRRKASRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVG 120

Query: 121 TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE 180
           TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE
Sbjct: 121 TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE 180

Query: 181 LSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQ 228
           LSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQ
Sbjct: 181 LSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQ 228

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BLAST of Spg007627 vs. NCBI nr
Match: XP_022156274.1 (ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic-like [Momordica charantia])

HSP 1 Score: 422.9 bits (1086), Expect = 1.7e-114
Identity = 219/227 (96.48%), Postives = 223/227 (98.24%), Query Frame = 0


Query: 1   MARVLVQSTNIPGLVGGRKNGLSRGSANVKRAVKMMASVHAPGLRIRNFSGLRGFNSLDN 60
           MARVLVQSTNIPGLVGGRKNG+SRGS NVKRAVKMMASVHAPGLRIR FSGLRGFNSLD+
Sbjct: 1   MARVLVQSTNIPGLVGGRKNGISRGSGNVKRAVKMMASVHAPGLRIRGFSGLRGFNSLDS 60

Query: 61  MLRTGQDFHSKMAITISSRRRKASRCVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGT 120
           MLRTGQDFHSKMAITISSRR +ASRCVP+AMFERFTEKAIKVIMLAQEEARRLGHNFVGT
Sbjct: 61  MLRTGQDFHSKMAITISSRRGRASRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVGT 120

Query: 121 EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL 180
           EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL
Sbjct: 121 EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL 180

Query: 181 SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQ 228
           SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADP NIRTQ
Sbjct: 181 SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPGNIRTQ 227

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BLAST of Spg007627 vs. NCBI nr
Match: XP_022974427.1 (chaperone protein ClpC, chloroplastic [Cucurbita maxima])

HSP 1 Score: 422.2 bits (1084), Expect = 3.0e-114
Identity = 219/227 (96.48%), Postives = 224/227 (98.68%), Query Frame = 0


Query: 1   MARVLVQSTNIPGLVGGRKNGLSRGSANVKRAVKMMASVHAPGLRIRNFSGLRGFNSLDN 60
           MARVLVQSTNIPGLVGGRKNGLSRGS NVKRAV+MMASVHAPG RIR+FSGLRGFNSLDN
Sbjct: 1   MARVLVQSTNIPGLVGGRKNGLSRGSVNVKRAVRMMASVHAPGSRIRSFSGLRGFNSLDN 60

Query: 61  MLRTGQDFHSKMAITISSRRRKASRCVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGT 120
           MLRT QDFHSK+AITISSRRRKA+RCVP+AMFERFTEKAIKVIMLAQEEARRLGHNFVGT
Sbjct: 61  MLRTRQDFHSKVAITISSRRRKATRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVGT 120

Query: 121 EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL 180
           EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL
Sbjct: 121 EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL 180

Query: 181 SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQ 228
           SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQ
Sbjct: 181 SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQ 227

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BLAST of Spg007627 vs. NCBI nr
Match: XP_038879609.1 (ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic [Benincasa hispida])

HSP 1 Score: 421.8 bits (1083), Expect = 3.9e-114
Identity = 221/228 (96.93%), Postives = 225/228 (98.68%), Query Frame = 0


Query: 1   MARVLVQSTNIPGLVGGRKNGL-SRGSANVKRAVKMMASVHAPGLRIRNFSGLRGFNSLD 60
           MARVLVQSTNIPGLVGGRKNGL SRGSANVKR VKMMA+VHAPGL IR+FSGLRGFNSLD
Sbjct: 1   MARVLVQSTNIPGLVGGRKNGLSSRGSANVKRVVKMMATVHAPGLTIRSFSGLRGFNSLD 60

Query: 61  NMLRTGQDFHSKMAITISSRRRKASRCVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVG 120
           NMLRTG+DFHSKMAITISSRRRKASRCVP+AMFERFTEKAIKVIMLAQEEARRLGHNFVG
Sbjct: 61  NMLRTGRDFHSKMAITISSRRRKASRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVG 120

Query: 121 TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE 180
           TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE
Sbjct: 121 TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE 180

Query: 181 LSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQ 228
           LSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQ
Sbjct: 181 LSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQ 228

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BLAST of Spg007627 vs. ExPASy Swiss-Prot
Match: P35100 (Chaperone protein ClpC, chloroplastic OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 5.0e-96
Identity = 182/227 (80.18%), Postives = 199/227 (87.67%), Query Frame = 0


Query: 1   MARVLVQSTNIPGLVGGRKNGLSRGSANVKRAVKMMASVHAPGLRIRNFSGLRGFNSLDN 60
           MARVL QS ++PGLV G K+   +GS   KR+VK M ++   GLR+  FSGLR FN L+ 
Sbjct: 1   MARVLAQSLSVPGLVAGHKDSQHKGSGKSKRSVKTMCALRTSGLRMSGFSGLRTFNHLNT 60

Query: 61  MLRTGQDFHSKMAITISSRRRKASRCVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGT 120
           M+R G DFHSK++  +SSRR +A R +P+AMFERFTEKAIKVIMLAQEEARRLGHNFVGT
Sbjct: 61  MMRPGLDFHSKVSKAVSSRRARAKRFIPRAMFERFTEKAIKVIMLAQEEARRLGHNFVGT 120

Query: 121 EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL 180
           EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL
Sbjct: 121 EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL 180

Query: 181 SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQ 228
           S EEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADP+NIRTQ
Sbjct: 181 SQEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPTNIRTQ 227

[Close]

BLAST of Spg007627 vs. ExPASy Swiss-Prot
Match: P31542 (ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CD4B PE=3 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 9.7e-92
Identity = 177/227 (77.97%), Postives = 193/227 (85.02%), Query Frame = 0


Query: 1   MARVLVQSTNIPGLVGGRKNGLSRGSANVKRAVKMMASVHAPGLRIRNFSGLRGFNSLDN 60
           MAR LVQST+IP  V G +     GS   KRAV M+ +  +  L +R+F+GLRG N++D 
Sbjct: 1   MARALVQSTSIPSSVAGERTTKFNGSGKTKRAVTMLCNAQSSSLTLRDFTGLRGCNAIDT 60

Query: 61  MLRTGQDFHSKMAITISSRRRKASRCVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGT 120
           ++R+G+   SK+A     RR +  R VPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGT
Sbjct: 61  LVRSGETLQSKVAAATYVRRPRGCRFVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGT 120

Query: 121 EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL 180
           EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL
Sbjct: 121 EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL 180

Query: 181 SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQ 228
           SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQ
Sbjct: 181 SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQ 227

[Close]

BLAST of Spg007627 vs. ExPASy Swiss-Prot
Match: P31541 (ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4A, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CD4A PE=3 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 6.9e-90
Identity = 177/228 (77.63%), Postives = 193/228 (84.65%), Query Frame = 0


Query: 1   MARVLVQSTNIPGLVGGRKNGLSRGSANVKRAVKMMASVHAPGLRIRNFSGLRGFNSLDN 60
           MAR LVQSTNI   V G + G   GS   +R V+M+ +V     R+ NF+GLRG N+LD 
Sbjct: 2   MARALVQSTNILPSVAGERAGQFNGSRKDQRTVRMLCNVKCCSSRLNNFAGLRGCNALDT 61

Query: 61  ML-RTGQDFHSKMAITISSRRRKASRCVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVG 120
           +L ++G+  HSK+A     RR +  R VPKAMFERFTEKAIKVIMLAQEEARRLGHNFVG
Sbjct: 62  LLVKSGETLHSKVAAATFVRRPRGCRFVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVG 121

Query: 121 TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE 180
           TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGF+AVEIPFTPRAKRVLE
Sbjct: 122 TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFIAVEIPFTPRAKRVLE 181

Query: 181 LSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQ 228
           LSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADP+NIRTQ
Sbjct: 182 LSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPTNIRTQ 229

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BLAST of Spg007627 vs. ExPASy Swiss-Prot
Match: Q9FI56 (Chaperone protein ClpC1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPC1 PE=1 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 3.8e-88
Identity = 179/226 (79.20%), Postives = 194/226 (85.84%), Query Frame = 0


Query: 3   RVLVQSTNIPGLVGGRKNGLSRGSANVKRAVKMMAS-VHAPGLRIRNFSGLRGFNSLDNM 62
           RVL QST  P L   ++N  SRGS   +R+VKMM S +   GLR++ F GLRG N+LD +
Sbjct: 6   RVLAQSTP-PSLACYQRNVPSRGSGRSRRSVKMMCSQLQVSGLRMQGFMGLRGNNALDTL 65

Query: 63  LRTGQDFHSKMAITISSRRRKASRCVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTE 122
            ++ QDFHSK+   ++  + KASR   KAMFERFTEKAIKVIMLAQEEARRLGHNFVGTE
Sbjct: 66  GKSRQDFHSKVRQAMNVPKGKASRFTVKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTE 125

Query: 123 QILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELS 182
           QILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELS
Sbjct: 126 QILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELS 185

Query: 183 LEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQ 228
           LEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQ
Sbjct: 186 LEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQ 230

[Close]

BLAST of Spg007627 vs. ExPASy Swiss-Prot
Match: Q9SXJ7 (Chaperone protein ClpC2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPC2 PE=1 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 5.7e-84
Identity = 166/195 (85.13%), Postives = 176/195 (90.26%), Query Frame = 0


Query: 33  VKMMASVHAPGLRIRNFSGLRGFNSLDNMLRTGQDFHSKMAITISSRRRKASRCVPKAMF 92
           VKMM+S+ AP L I++FSGLR  ++LD + R    F  K  +  SS R KASRCVPKAMF
Sbjct: 56  VKMMSSLQAPLLTIQSFSGLRAPSALDYLGRPSPGFLVKYKLAKSSGREKASRCVPKAMF 115

Query: 93  ERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVE 152
           ERFTEKAIKVIML+QEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKD+RVE
Sbjct: 116 ERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDSRVE 175

Query: 153 VEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAAR 212
           VEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAAR
Sbjct: 176 VEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAAR 235

Query: 213 VLENLGADPSNIRTQ 228
           VLENLGADPSNIRTQ
Sbjct: 236 VLENLGADPSNIRTQ 250

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BLAST of Spg007627 vs. ExPASy TrEMBL
Match: A0A6J1BYC4 (ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111006853 PE=3 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 8.4e-115
Identity = 218/227 (96.04%), Postives = 225/227 (99.12%), Query Frame = 0


Query: 1   MARVLVQSTNIPGLVGGRKNGLSRGSANVKRAVKMMASVHAPGLRIRNFSGLRGFNSLDN 60
           MARVLVQSTNIPGLVGGRKNG+SRGS NVKRAVKMMASVH+PGLRIR+FSGLRGFN+LDN
Sbjct: 1   MARVLVQSTNIPGLVGGRKNGISRGSGNVKRAVKMMASVHSPGLRIRSFSGLRGFNALDN 60

Query: 61  MLRTGQDFHSKMAITISSRRRKASRCVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGT 120
           MLRTG+DFHSKMAITISSRR KA+RCVP+AMFERFTEKAIKVIMLAQEEARRLGHNFVGT
Sbjct: 61  MLRTGRDFHSKMAITISSRRGKATRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVGT 120

Query: 121 EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL 180
           EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL
Sbjct: 121 EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL 180

Query: 181 SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQ 228
           SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQ
Sbjct: 181 SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQ 227

[Close]

BLAST of Spg007627 vs. ExPASy TrEMBL
Match: A0A6J1DSX9 (ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111023207 PE=3 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 8.4e-115
Identity = 219/227 (96.48%), Postives = 223/227 (98.24%), Query Frame = 0


Query: 1   MARVLVQSTNIPGLVGGRKNGLSRGSANVKRAVKMMASVHAPGLRIRNFSGLRGFNSLDN 60
           MARVLVQSTNIPGLVGGRKNG+SRGS NVKRAVKMMASVHAPGLRIR FSGLRGFNSLD+
Sbjct: 1   MARVLVQSTNIPGLVGGRKNGISRGSGNVKRAVKMMASVHAPGLRIRGFSGLRGFNSLDS 60

Query: 61  MLRTGQDFHSKMAITISSRRRKASRCVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGT 120
           MLRTGQDFHSKMAITISSRR +ASRCVP+AMFERFTEKAIKVIMLAQEEARRLGHNFVGT
Sbjct: 61  MLRTGQDFHSKMAITISSRRGRASRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVGT 120

Query: 121 EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL 180
           EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL
Sbjct: 121 EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL 180

Query: 181 SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQ 228
           SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADP NIRTQ
Sbjct: 181 SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPGNIRTQ 227

[Close]

BLAST of Spg007627 vs. ExPASy TrEMBL
Match: A0A1S3CMV1 (ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502278 PE=3 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 8.4e-115
Identity = 221/228 (96.93%), Postives = 226/228 (99.12%), Query Frame = 0


Query: 1   MARVLVQSTNIPGLVGGRKNGL-SRGSANVKRAVKMMASVHAPGLRIRNFSGLRGFNSLD 60
           MARVLVQSTNIPGLVGGRKNGL SRGSA+VKRAVKMMA+ H+PGLRIRNFSGLRGFNSLD
Sbjct: 1   MARVLVQSTNIPGLVGGRKNGLTSRGSASVKRAVKMMATAHSPGLRIRNFSGLRGFNSLD 60

Query: 61  NMLRTGQDFHSKMAITISSRRRKASRCVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVG 120
           NMLR+GQDFHSKMAITISSRRRKASRCVP+AMFERFTEKAIKVIMLAQEEARRLGHNFVG
Sbjct: 61  NMLRSGQDFHSKMAITISSRRRKASRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVG 120

Query: 121 TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE 180
           TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE
Sbjct: 121 TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE 180

Query: 181 LSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQ 228
           LSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQ
Sbjct: 181 LSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQ 228

[Close]

BLAST of Spg007627 vs. ExPASy TrEMBL
Match: A0A6J1IA80 (chaperone protein ClpC, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111473094 PE=3 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 1.4e-114
Identity = 219/227 (96.48%), Postives = 224/227 (98.68%), Query Frame = 0


Query: 1   MARVLVQSTNIPGLVGGRKNGLSRGSANVKRAVKMMASVHAPGLRIRNFSGLRGFNSLDN 60
           MARVLVQSTNIPGLVGGRKNGLSRGS NVKRAV+MMASVHAPG RIR+FSGLRGFNSLDN
Sbjct: 1   MARVLVQSTNIPGLVGGRKNGLSRGSVNVKRAVRMMASVHAPGSRIRSFSGLRGFNSLDN 60

Query: 61  MLRTGQDFHSKMAITISSRRRKASRCVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGT 120
           MLRT QDFHSK+AITISSRRRKA+RCVP+AMFERFTEKAIKVIMLAQEEARRLGHNFVGT
Sbjct: 61  MLRTRQDFHSKVAITISSRRRKATRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVGT 120

Query: 121 EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL 180
           EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL
Sbjct: 121 EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL 180

Query: 181 SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQ 228
           SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQ
Sbjct: 181 SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQ 227

[Close]

BLAST of Spg007627 vs. ExPASy TrEMBL
Match: A0A3Q8R4B5 (Chaperone protein ClpC OS=Cucurbita moschata OX=3662 PE=2 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 1.2e-113
Identity = 218/227 (96.04%), Postives = 222/227 (97.80%), Query Frame = 0


Query: 1   MARVLVQSTNIPGLVGGRKNGLSRGSANVKRAVKMMASVHAPGLRIRNFSGLRGFNSLDN 60
           MARVLVQSTNIPGLVGGRK GLSRGS NVKRAV+MMASVHAPG RIR+FSGLR FNSLDN
Sbjct: 1   MARVLVQSTNIPGLVGGRKTGLSRGSVNVKRAVRMMASVHAPGSRIRSFSGLREFNSLDN 60

Query: 61  MLRTGQDFHSKMAITISSRRRKASRCVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGT 120
           MLR GQDFHS++AITISSRRRKASRCVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGT
Sbjct: 61  MLRNGQDFHSRVAITISSRRRKASRCVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGT 120

Query: 121 EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL 180
           EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL
Sbjct: 121 EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL 180

Query: 181 SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQ 228
           SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQ
Sbjct: 181 SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQ 227

[Close]

BLAST of Spg007627 vs. TAIR 10
Match: AT5G50920.1 (CLPC homologue 1 )

HSP 1 Score: 325.9 bits (834), Expect = 2.7e-89
Identity = 179/226 (79.20%), Postives = 194/226 (85.84%), Query Frame = 0


Query: 3   RVLVQSTNIPGLVGGRKNGLSRGSANVKRAVKMMAS-VHAPGLRIRNFSGLRGFNSLDNM 62
           RVL QST  P L   ++N  SRGS   +R+VKMM S +   GLR++ F GLRG N+LD +
Sbjct: 6   RVLAQSTP-PSLACYQRNVPSRGSGRSRRSVKMMCSQLQVSGLRMQGFMGLRGNNALDTL 65

Query: 63  LRTGQDFHSKMAITISSRRRKASRCVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTE 122
            ++ QDFHSK+   ++  + KASR   KAMFERFTEKAIKVIMLAQEEARRLGHNFVGTE
Sbjct: 66  GKSRQDFHSKVRQAMNVPKGKASRFTVKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTE 125

Query: 123 QILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELS 182
           QILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELS
Sbjct: 126 QILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELS 185

Query: 183 LEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQ 228
           LEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQ
Sbjct: 186 LEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQ 230

[Close]

BLAST of Spg007627 vs. TAIR 10
Match: AT3G48870.1 (Clp ATPase )

HSP 1 Score: 312.0 bits (798), Expect = 4.0e-85
Identity = 166/195 (85.13%), Postives = 176/195 (90.26%), Query Frame = 0


Query: 33  VKMMASVHAPGLRIRNFSGLRGFNSLDNMLRTGQDFHSKMAITISSRRRKASRCVPKAMF 92
           VKMM+S+ AP L I++FSGLR  ++LD + R    F  K  +  SS R KASRCVPKAMF
Sbjct: 56  VKMMSSLQAPLLTIQSFSGLRAPSALDYLGRPSPGFLVKYKLAKSSGREKASRCVPKAMF 115

Query: 93  ERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVE 152
           ERFTEKAIKVIML+QEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKD+RVE
Sbjct: 116 ERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDSRVE 175

Query: 153 VEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAAR 212
           VEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAAR
Sbjct: 176 VEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAAR 235

Query: 213 VLENLGADPSNIRTQ 228
           VLENLGADPSNIRTQ
Sbjct: 236 VLENLGADPSNIRTQ 250

[Close]

BLAST of Spg007627 vs. TAIR 10
Match: AT3G48870.2 (Clp ATPase )

HSP 1 Score: 312.0 bits (798), Expect = 4.0e-85
Identity = 166/195 (85.13%), Postives = 176/195 (90.26%), Query Frame = 0


Query: 33  VKMMASVHAPGLRIRNFSGLRGFNSLDNMLRTGQDFHSKMAITISSRRRKASRCVPKAMF 92
           VKMM+S+ AP L I++FSGLR  ++LD + R    F  K  +  SS R KASRCVPKAMF
Sbjct: 25  VKMMSSLQAPLLTIQSFSGLRAPSALDYLGRPSPGFLVKYKLAKSSGREKASRCVPKAMF 84

Query: 93  ERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVE 152
           ERFTEKAIKVIML+QEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKD+RVE
Sbjct: 85  ERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDSRVE 144

Query: 153 VEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAAR 212
           VEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAAR
Sbjct: 145 VEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAAR 204

Query: 213 VLENLGADPSNIRTQ 228
           VLENLGADPSNIRTQ
Sbjct: 205 VLENLGADPSNIRTQ 219

[Close]

BLAST of Spg007627 vs. TAIR 10
Match: AT3G45450.1 (Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 166.8 bits (421), Expect = 2.1e-41
Identity = 96/137 (70.07%), Postives = 100/137 (72.99%), Query Frame = 0


Query: 91  MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDAR 150
           MFERFTEKAIKVI LAQEEARRLG+NF GTE ILL LIGEGTGIAAKVLKSMGINLKDAR
Sbjct: 1   MFERFTEKAIKVITLAQEEARRLGYNFFGTEHILLSLIGEGTGIAAKVLKSMGINLKDAR 60

Query: 151 VEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVA 210
           VEVEKIIGRGSGFV VEIPFTPR K         +    H                +G+A
Sbjct: 61  VEVEKIIGRGSGFVVVEIPFTPR-KACAGFVTRGSSTTRH----------------KGIA 120

Query: 211 ARVLENLGADPSNIRTQ 228
            RVLE LGADPSNIRTQ
Sbjct: 121 VRVLEILGADPSNIRTQ 120

[Close]

BLAST of Spg007627 vs. TAIR 10
Match: AT5G51070.1 (Clp ATPase )

HSP 1 Score: 82.8 bits (203), Expect = 4.0e-16
Identity = 56/163 (34.36%), Postives = 94/163 (57.67%), Query Frame = 0


Query: 80  RRKASRCVP-KAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGE-------- 139
           +RK  +  P  A+FERFTE+AI+ I+ +Q+EA+ LG + V T+ +LLGLI E        
Sbjct: 67  QRKRKKFTPISAVFERFTERAIRAIIFSQKEAKSLGKDMVYTQHLLLGLIAEDRDPQGFL 126

Query: 140 GTGIAA-KVLKSMGINLKDARVEVEKIIGRGSGF-VAVEIPFTPRAKRVLELSLEEARQL 199
           G+GI   K  +++     +A  + ++     + +  + ++PF+   KRV E ++E +R +
Sbjct: 127 GSGITIDKAREAVWSIWDEANSDSKQEEASSTSYSKSTDMPFSISTKRVFEAAVEYSRTM 186

Query: 200 GHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQARIS 232
              YI  EH+ +GL    +G A RVL+ LGA+  N+ T A ++
Sbjct: 187 DCQYIAPEHIAVGLFTVDDGSAGRVLKRLGAN-MNLLTAAALT 228

The following BLAST results are available for this feature:

BLAST of Spg007627 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134630.1	1.7e-114	96.04	ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic ...	[more]
XP_008464372.1	1.7e-114	96.93	PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chl...	[more]
XP_022156274.1	1.7e-114	96.48	ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic-...	[more]
XP_022974427.1	3.0e-114	96.48	chaperone protein ClpC, chloroplastic [Cucurbita maxima]	[more]
XP_038879609.1	3.9e-114	96.93	ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic ...	[more]

BLAST of Spg007627 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P35100	5.0e-96	80.18	Chaperone protein ClpC, chloroplastic OS=Pisum sativum OX=3888 PE=2 SV=1	[more]
P31542	9.7e-92	77.97	ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic ...	[more]
P31541	6.9e-90	77.63	ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4A, chloroplastic ...	[more]
Q9FI56	3.8e-88	79.20	Chaperone protein ClpC1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPC1 ...	[more]
Q9SXJ7	5.7e-84	85.13	Chaperone protein ClpC2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPC2 ...	[more]

BLAST of Spg007627 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BYC4	8.4e-115	96.04	ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic ...	[more]
A0A6J1DSX9	8.4e-115	96.48	ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic-...	[more]
A0A1S3CMV1	8.4e-115	96.93	ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic ...	[more]
A0A6J1IA80	1.4e-114	96.48	chaperone protein ClpC, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11147309...	[more]
A0A3Q8R4B5	1.2e-113	96.04	Chaperone protein ClpC OS=Cucurbita moschata OX=3662 PE=2 SV=1	[more]

BLAST of Spg007627 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G50920.1	2.7e-89	79.20	CLPC homologue 1	[more]
AT3G48870.1	4.0e-85	85.13	Clp ATPase	[more]
AT3G48870.2	4.0e-85	85.13	Clp ATPase	[more]
AT3G45450.1	2.1e-41	70.07	Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfam...	[more]
AT5G51070.1	4.0e-16	34.36	Clp ATPase	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004176	Clp, repeat (R) domain	PFAM	PF02861	Clp_N	coord: 106..158 e-value: 3.2E-18 score: 65.6 coord: 182..227 e-value: 4.2E-18 score: 65.2
IPR004176	Clp, repeat (R) domain	PROSITE	PS51903	CLP_R	coord: 92..232 score: 48.166573
IPR036628	Clp, N-terminal domain superfamily	GENE3D	1.10.1780.10		coord: 91..231 e-value: 1.1E-57 score: 196.1
IPR036628	Clp, N-terminal domain superfamily	SUPERFAMILY	81923	Double Clp-N motif	coord: 93..226
None	No IPR available	PANTHER	PTHR43572	CHAPERONE PROTEIN CLPD, CHLOROPLASTIC	coord: 48..228
None	No IPR available	PANTHER	PTHR43572:SF53	CHAPERONE PROTEIN CLPC2, CHLOROPLASTIC	coord: 48..228

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg007627.1	Spg007627.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006508	proteolysis
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008233	peptidase activity