Spg007605 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTCGAGTTGTAGTCGTCTGGGGTCGCGCCCTTCTCGCTCCCGAGATTACCGCACCAACCGCTCCAAGTTCTGCTCTCTTTTCTGCGGTGCTTCCTCTTCTCGCGCCATTCATCAGGTCATTTTTCTTATACTTCGTCATTATCAGCATCGAATCTTTTGTTCTTCTTGTTTGCCCTTTCTCCCATTTCTTGCGATTCTTGGTGAATTTGAGTCTAATTCGTTCTTGGAATCTTGTTTGGATAATCTGGGATTGGTTATCTTCATGTCAAAGATTGACCCCGGATAGCATATTTTAGTGGGAGCTGATTTTGGGTTTCGTTTGATTGAAGTCTTGTATCCGTTTGGTGTGGTTTTTAGTTGCTTGGACTTCCGGAGTTGTTTTTGGGGGGATTTTGGATGAGTTTTGATCTACCAAGAAGTGAAGAAAATCGGTTTATCTCGCAGCAATTAGGTCCAAAACTGCTGTAGCTTTTGTAATTTGTTTCTGTGTGTTTGCTGTTTGTTTTGCTTGTGAGTAGGATGATGTTTTGTTGATTATTGATGGGTAATGATCATTATCCGATTGTCTGGGTTTTGAATCTTTAATCCTGAAAAAGTTCGTTGGTGGTTGGGGAAGATTTTGAAAGTTCTTACAGCCTGGAATTGCTAGTTGACCTGAAGTTGAAATCTTGAATGTTATACTTGTGTCATTTTTATGTTTCTGTTAACATTGATCAGAGTGCCTCTCTGTTTTCTGTTTCCAATCCTTCTGTAAACGAATAAGGAAATTTGAGATGCTATGAACAAATAATAATTCAAGTGCTGGATTATGTTACAATTTCTTGTTTACTTGAAACTTTTTTTTTAAAAAAAAAAATCAGGTTTTGGCAATTGAAATAGCTGTGTAAAGTTGTTTTTGTTTAATTTGCGTGTAAGGGATGCAAAGTGATCATCCAGGTCTTATTATGCAAATTGACATTTTTTTATTGGTCTTTGAAGAAGTTTCTATTAGTCATCCTGTTTTCACTTCAATTCACCTCATTGTTTATCATTGAATATATTGAAAAGATCGAATATAACCTAGGCCAACAACTTAAGCTTTCAGTATAGTTATAGTTTAACATGATATCAAAGTAGGAATTTCCAAGTTCAAATATTTGCAATGTTATTCCAGTTCATTTCTTACCAATAGTTTAGGTGTTGGGCTGCATGCTATCAAGAATATATTGAAAAGAAAATGTTGTTGACCCAATAGCTTAAGCTTTCCATGTATTGATAATTTAACACTCATGCATACAAGTTATCTTGATGCTTTTTATGGCTATGCTTATATAGATATATTATTGTGTACTGACAAAATTTCAAATGAATTACTAAGCCAGTTCACCTAGGTGGCAATATCTCTGCTAAATAGAAATTGATGGAAGTTAATTGTACCATTCAAGTCCTGAGTCTAGGCAATTATAATTAGTTTCTAACCATCAAAGTTTGTCTTTCGCTCTCATTTTGCATGGAGATTACTTTCAACAAGCTTAGATGACCAATTAAGTCTTAAGCTGACGCCTATTTTTAATAGATGGAAGATTCTACAGCTCAATTTCTTGTCCACCCAACAGAACATCAACATTGTAATCACAACATTGATGAAGTTCAACTCTCCACAAATGGATCTATAAGAAGGGGACTTCCTAGTGTTAGCACTTATCCTGAGAACTTACACGAGAACGGCATTGCAATCAGTGAAGAGCAATGTGCTGTAAATGATCCAAGAAATATTGATATCAATGTTCATGGCAAGTGTTTGTCTCAAAATAAGGAATTAGCTTCTCTTCAACAGGTTAGTGCCGATTACAGTCATGATGAATCTCATAGATATAGTAATGCTTCCAATGGTACTTCATTTAAAGGACGTCAATCTTCCGAACCAGTATCTGTAAATATTTTGGCTAACGAGGATGCAGTAAATGGCATTGATAGTTCAGTGGACAAGAGTGTATCTCCAGTCTGCACGAAGGTCATGTTTGCGGCTAGCAGTTCGACTACTCAAGAGGTTGGAGACTTATGTTCCAATGAGCTGACAGGTCACATTCAAGAGGACGAGGCAACAGCTTACCGGAACCCAGACTCTGAATCTTCTCCTTGTGGTTCTGATCTTCCATTAACTTTTCAATCTCTTGGAGATGAATCTTCTCAAGAGGTACCCTCAAGTTCGGACACTCTTGTGTCTGATGATAGGGAGCTAGGCCAAGGAGATGTGGGTATGCCTCATGTTGATATGGCCAGTATTTCTTCCAATGTTTTATCTACAAGTAGCACTGATGCAAGTTATCTCGAGGCCAGAAGAAATAGCAGAAGACTGTTTTGGGATGCCTTTTCAAGACGTAGTTTTAGAAGACATAGTGAATCTCCATTTGCTTTCCCATCTAATAACTTTAGTAATACAGGAGATCCAGACAGGTGGCTCCTTGATATAAGTGGTGATTTTATTGATGATGAAATGAGTGGCGATTCAAGACATTTTTCCAGCAGAATTCAGATCTTGAATGAACAACAAAGAAACTCGAGATCTCAGGTTATATTCTGAATGTTAACAATTATGAATTTCTTTTGATTATTACTACTTTTTACCTACGATATCTCTCTTTTTTTTAACTTGAAAAGGCAGTACATATGCAGTGATCCTTCGTATAGGAATTAAAAAAAAAAAAATGCTTTCAGCAATGTTTATTATAACTGAGATCGACTTCATTTAGCACTCCACTGAACTGAATGTTCTATATTTTCATTTTAAGTAGTAATAGAACCTAGTTGCAGTCGTCCATTGTGTTTATATGTAATTGCTTCTCAAATAGGTGCAGATATGGGAAAGACTTCGTAGTAGTCTCAGTGAAAACAGTCAGCAAAACTTATCTTGCCCATCAGGCCTTCACCCTAATGGTGCCTGTTCGTGTGACTCATTCTCAAGGATAGAACACTCAAGTACCCGTGCAAGCATATCGCGGATAATCATGCTTGCTGAAGCATTATTTGAGGTAGCTTTCCCCTGGTCAACTCCTTAAATTTTAAGATGATATTGTGTTATGTAAACCATATACATCACCAGTATGGTGTAGGAAGCATGTATATGGGGCTGTTCATTCACTTTAATGGGAACTCTAAGCTATCTATTAATTTTAGGCAATTGGATATTTCTGATAAAAGTTTTTGCAGTATCGCCTACTTTTTTGGTGTTCTAATGCTGTATTTCATCACTTGTCTCACATCTTGTTCTGTGTATATGAAGGTCTTGGATGAAATTCATGGTCAGCCTGTTTCTCTTGCCCTGTCCATGGTTTCACTCCCAGCACCAGAATCAGTTGTTGACTCTTTTCCTCTGAAGAACCACGAAAAGACAATTAATGGAGGGGATGAAATTGAACAGTAGGTTTCCTCTTTCCATTAACTAAGTACTCGGTGTATGTTGTTAAGCATTGACATGGAATGTGATACAATCCTCCTATCAAATTGGAATGTTTTAGTTAGCAATCCTCTTATTATACTGCTAATGCCATGCTCGCTTAAAGAAAAGGTTCGAGAGACTCGTGGAATGTTTTGATTCTGAATAGCTTACTTGCAGTACTTGTTTGGTTTCTAATTTGTGAATGTTTACAAATATTTGGTTAGATGCTACATTTGCTTGGCTGAGTATGAAGAGGGTGATAAAATAAGAGTCCTTCCTTGCCGCCATGAGTATCATATGTTGTGCGTCGATAAATGGTTGAAGGAGATTCACGGGTATGTACGCATATACTTCAATTACTGCTCCCCATATTTAGCTATATTATGTCCTGCAATCATTTTACTCATCCCCCTGCCTCACTGTGTTTAA ATGGGTTCGAGTTGTAGTCGTCTGGGGTCGCGCCCTTCTCGCTCCCGAGATTACCGCACCAACCGCTCCAAGTTCTGCTCTCTTTTCTGCGGTGCTTCCTCTTCTCGCGCCATTCATCAGGTCATTTTTCTTATACTTCGTCATTATCAGCATCGAATCTTTTGTTCTTCTTGTTTGCCCTTTCTCCCATTTCTTGCGATTCTTGGTGAATTTGAGTCTAATTCGTTCTTGGAATCTTGTTTGGATAATCTGGGATTGATGGAAGATTCTACAGCTCAATTTCTTGTCCACCCAACAGAACATCAACATTGTAATCACAACATTGATGAAGTTCAACTCTCCACAAATGGATCTATAAGAAGGGGACTTCCTAGTGTTAGCACTTATCCTGAGAACTTACACGAGAACGGCATTGCAATCAGTGAAGAGCAATGTGCTGTAAATGATCCAAGAAATATTGATATCAATGTTCATGGCAAGTGTTTGTCTCAAAATAAGGAATTAGCTTCTCTTCAACAGGTTAGTGCCGATTACAGTCATGATGAATCTCATAGATATAGTAATGCTTCCAATGGTACTTCATTTAAAGGACGTCAATCTTCCGAACCAGTATCTGTAAATATTTTGGCTAACGAGGATGCAGTAAATGGCATTGATAGTTCAGTGGACAAGAGTGTATCTCCAGTCTGCACGAAGGTCATGTTTGCGGCTAGCAGTTCGACTACTCAAGAGGTTGGAGACTTATGTTCCAATGAGCTGACAGGTCACATTCAAGAGGACGAGGCAACAGCTTACCGGAACCCAGACTCTGAATCTTCTCCTTGTGGTTCTGATCTTCCATTAACTTTTCAATCTCTTGGAGATGAATCTTCTCAAGAGGTACCCTCAAGTTCGGACACTCTTGTGTCTGATGATAGGGAGCTAGGCCAAGGAGATGTGGGTATGCCTCATGTTGATATGGCCAGTATTTCTTCCAATGTTTTATCTACAAGTAGCACTGATGCAAGTTATCTCGAGGCCAGAAGAAATAGCAGAAGACTGTTTTGGGATGCCTTTTCAAGACGTAGTTTTAGAAGACATAGTGAATCTCCATTTGCTTTCCCATCTAATAACTTTAGTAATACAGGAGATCCAGACAGGTGGCTCCTTGATATAAGTGGTGATTTTATTGATGATGAAATGAGTGGCGATTCAAGACATTTTTCCAGCAGAATTCAGATCTTGAATGAACAACAAAGAAACTCGAGATCTCAGGTGCAGATATGGGAAAGACTTCGTAGTAGTCTCAGTGAAAACAGTCAGCAAAACTTATCTTGCCCATCAGGCCTTCACCCTAATGGTGCCTGTTCGTGTGACTCATTCTCAAGGATAGAACACTCAAGTACCCGTGCAAGCATATCGCGGATAATCATGCTTGCTGAAGCATTATTTGAGGTCTTGGATGAAATTCATGGTCAGCCTGTTTCTCTTGCCCTGTCCATGGTTTCACTCCCAGCACCAGAATCAGTTGTTGACTCTTTTCCTCTGAAGAACCACGAAAAGACAATTAATGGAGGGGATGAAATTGAACAATGCTACATTTGCTTGGCTGAGTATGAAGAGGGTGATAAAATAAGAGTCCTTCCTTGCCGCCATGAGTATCATATGTTGTGCGTCGATAAATGGTTGAAGGAGATTCACGGGTATGTACGCATATACTTCAATTACTGCTCCCCATATTTAGCTATATTATGTCCTGCAATCATTTTACTCATCCCCCTGCCTCACTGTGTTTAA ATGGGTTCGAGTTGTAGTCGTCTGGGGTCGCGCCCTTCTCGCTCCCGAGATTACCGCACCAACCGCTCCAAGTTCTGCTCTCTTTTCTGCGGTGCTTCCTCTTCTCGCGCCATTCATCAGGTCATTTTTCTTATACTTCGTCATTATCAGCATCGAATCTTTTGTTCTTCTTGTTTGCCCTTTCTCCCATTTCTTGCGATTCTTGGTGAATTTGAGTCTAATTCGTTCTTGGAATCTTGTTTGGATAATCTGGGATTGATGGAAGATTCTACAGCTCAATTTCTTGTCCACCCAACAGAACATCAACATTGTAATCACAACATTGATGAAGTTCAACTCTCCACAAATGGATCTATAAGAAGGGGACTTCCTAGTGTTAGCACTTATCCTGAGAACTTACACGAGAACGGCATTGCAATCAGTGAAGAGCAATGTGCTGTAAATGATCCAAGAAATATTGATATCAATGTTCATGGCAAGTGTTTGTCTCAAAATAAGGAATTAGCTTCTCTTCAACAGGTTAGTGCCGATTACAGTCATGATGAATCTCATAGATATAGTAATGCTTCCAATGGTACTTCATTTAAAGGACGTCAATCTTCCGAACCAGTATCTGTAAATATTTTGGCTAACGAGGATGCAGTAAATGGCATTGATAGTTCAGTGGACAAGAGTGTATCTCCAGTCTGCACGAAGGTCATGTTTGCGGCTAGCAGTTCGACTACTCAAGAGGTTGGAGACTTATGTTCCAATGAGCTGACAGGTCACATTCAAGAGGACGAGGCAACAGCTTACCGGAACCCAGACTCTGAATCTTCTCCTTGTGGTTCTGATCTTCCATTAACTTTTCAATCTCTTGGAGATGAATCTTCTCAAGAGGTACCCTCAAGTTCGGACACTCTTGTGTCTGATGATAGGGAGCTAGGCCAAGGAGATGTGGGTATGCCTCATGTTGATATGGCCAGTATTTCTTCCAATGTTTTATCTACAAGTAGCACTGATGCAAGTTATCTCGAGGCCAGAAGAAATAGCAGAAGACTGTTTTGGGATGCCTTTTCAAGACGTAGTTTTAGAAGACATAGTGAATCTCCATTTGCTTTCCCATCTAATAACTTTAGTAATACAGGAGATCCAGACAGGTGGCTCCTTGATATAAGTGGTGATTTTATTGATGATGAAATGAGTGGCGATTCAAGACATTTTTCCAGCAGAATTCAGATCTTGAATGAACAACAAAGAAACTCGAGATCTCAGGTGCAGATATGGGAAAGACTTCGTAGTAGTCTCAGTGAAAACAGTCAGCAAAACTTATCTTGCCCATCAGGCCTTCACCCTAATGGTGCCTGTTCGTGTGACTCATTCTCAAGGATAGAACACTCAAGTACCCGTGCAAGCATATCGCGGATAATCATGCTTGCTGAAGCATTATTTGAGGTCTTGGATGAAATTCATGGTCAGCCTGTTTCTCTTGCCCTGTCCATGGTTTCACTCCCAGCACCAGAATCAGTTGTTGACTCTTTTCCTCTGAAGAACCACGAAAAGACAATTAATGGAGGGGATGAAATTGAACAATGCTACATTTGCTTGGCTGAGTATGAAGAGGGTGATAAAATAAGAGTCCTTCCTTGCCGCCATGAGTATCATATGTTGTGCGTCGATAAATGGTTGAAGGAGATTCACGGGTATGTACGCATATACTTCAATTACTGCTCCCCATATTTAGCTATATTATGTCCTGCAATCATTTTACTCATCCCCCTGCCTCACTGTGTTTAA MGSSCSRLGSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQVIFLILRHYQHRIFCSSCLPFLPFLAILGEFESNSFLESCLDNLGLMEDSTAQFLVHPTEHQHCNHNIDEVQLSTNGSIRRGLPSVSTYPENLHENGIAISEEQCAVNDPRNIDINVHGKCLSQNKELASLQQVSADYSHDESHRYSNASNGTSFKGRQSSEPVSVNILANEDAVNGIDSSVDKSVSPVCTKVMFAASSSTTQEVGDLCSNELTGHIQEDEATAYRNPDSESSPCGSDLPLTFQSLGDESSQEVPSSSDTLVSDDRELGQGDVGMPHVDMASISSNVLSTSSTDASYLEARRNSRRLFWDAFSRRSFRRHSESPFAFPSNNFSNTGDPDRWLLDISGDFIDDEMSGDSRHFSSRIQILNEQQRNSRSQVQIWERLRSSLSENSQQNLSCPSGLHPNGACSCDSFSRIEHSSTRASISRIIMLAEALFEVLDEIHGQPVSLALSMVSLPAPESVVDSFPLKNHEKTINGGDEIEQCYICLAEYEEGDKIRVLPCRHEYHMLCVDKWLKEIHGYVRIYFNYCSPYLAILCPAIILLIPLPHCV Homology
BLAST of Spg007605 vs. NCBI nr
Match: XP_038876906.1 (uncharacterized protein LOC120069259 isoform X1 [Benincasa hispida]) HSP 1 Score: 883.6 bits (2282), Expect = 9.2e-253 Identity = 463/562 (82.38%), Postives = 477/562 (84.88%), Query Frame = 0
BLAST of Spg007605 vs. NCBI nr
Match: XP_038876907.1 (uncharacterized protein LOC120069259 isoform X2 [Benincasa hispida]) HSP 1 Score: 876.3 bits (2263), Expect = 1.5e-250 Identity = 462/562 (82.21%), Postives = 475/562 (84.52%), Query Frame = 0
BLAST of Spg007605 vs. NCBI nr
Match: XP_011655776.1 (uncharacterized protein LOC101215855 isoform X1 [Cucumis sativus]) HSP 1 Score: 850.5 bits (2196), Expect = 8.6e-243 Identity = 447/561 (79.68%), Postives = 464/561 (82.71%), Query Frame = 0
BLAST of Spg007605 vs. NCBI nr
Match: XP_016899819.1 (PREDICTED: E3 ubiquitin-protein ligase RNF12-A-like isoform X1 [Cucumis melo]) HSP 1 Score: 850.1 bits (2195), Expect = 1.1e-242 Identity = 450/561 (80.21%), Postives = 466/561 (83.07%), Query Frame = 0
BLAST of Spg007605 vs. NCBI nr
Match: XP_004146706.1 (uncharacterized protein LOC101215855 isoform X2 [Cucumis sativus] >KGN65208.1 hypothetical protein Csa_019864 [Cucumis sativus]) HSP 1 Score: 843.2 bits (2177), Expect = 1.4e-240 Identity = 446/561 (79.50%), Postives = 462/561 (82.35%), Query Frame = 0
BLAST of Spg007605 vs. ExPASy Swiss-Prot
Match: Q91XF4 (E3 ubiquitin-protein ligase RNF167 OS=Mus musculus OX=10090 GN=Rnf167 PE=2 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 1.4e-09 Identity = 26/40 (65.00%), Postives = 30/40 (75.00%), Query Frame = 0
BLAST of Spg007605 vs. ExPASy Swiss-Prot
Match: Q5XIL0 (E3 ubiquitin-protein ligase RNF167 OS=Rattus norvegicus OX=10116 GN=Rnf167 PE=2 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 1.8e-09 Identity = 25/40 (62.50%), Postives = 30/40 (75.00%), Query Frame = 0
BLAST of Spg007605 vs. ExPASy Swiss-Prot
Match: O54965 (E3 ubiquitin-protein ligase RNF13 OS=Mus musculus OX=10090 GN=Rnf13 PE=1 SV=2) HSP 1 Score: 65.5 bits (158), Expect = 2.4e-09 Identity = 25/38 (65.79%), Postives = 29/38 (76.32%), Query Frame = 0
BLAST of Spg007605 vs. ExPASy Swiss-Prot
Match: Q66HG0 (E3 ubiquitin-protein ligase RNF13 OS=Rattus norvegicus OX=10116 GN=Rnf13 PE=2 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 2.4e-09 Identity = 25/38 (65.79%), Postives = 29/38 (76.32%), Query Frame = 0
BLAST of Spg007605 vs. ExPASy Swiss-Prot
Match: Q9H6Y7 (E3 ubiquitin-protein ligase RNF167 OS=Homo sapiens OX=9606 GN=RNF167 PE=1 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 3.1e-09 Identity = 25/40 (62.50%), Postives = 30/40 (75.00%), Query Frame = 0
BLAST of Spg007605 vs. ExPASy TrEMBL
Match: A0A1S4DV08 (E3 ubiquitin-protein ligase RNF12-A-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487388 PE=4 SV=1) HSP 1 Score: 850.1 bits (2195), Expect = 5.4e-243 Identity = 450/561 (80.21%), Postives = 466/561 (83.07%), Query Frame = 0
BLAST of Spg007605 vs. ExPASy TrEMBL
Match: A0A0A0LTU1 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G265080 PE=4 SV=1) HSP 1 Score: 843.2 bits (2177), Expect = 6.7e-241 Identity = 446/561 (79.50%), Postives = 462/561 (82.35%), Query Frame = 0
BLAST of Spg007605 vs. ExPASy TrEMBL
Match: A0A1S3B977 (uncharacterized protein LOC103487388 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487388 PE=4 SV=1) HSP 1 Score: 841.6 bits (2173), Expect = 1.9e-240 Identity = 448/561 (79.86%), Postives = 464/561 (82.71%), Query Frame = 0
BLAST of Spg007605 vs. ExPASy TrEMBL
Match: A0A6J1BZU1 (uncharacterized protein LOC111007190 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007190 PE=4 SV=1) HSP 1 Score: 819.7 bits (2116), Expect = 7.9e-234 Identity = 437/566 (77.21%), Postives = 465/566 (82.16%), Query Frame = 0
BLAST of Spg007605 vs. ExPASy TrEMBL
Match: A0A6J1E2Q3 (uncharacterized RING finger protein C4G3.12c-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430037 PE=4 SV=1) HSP 1 Score: 818.9 bits (2114), Expect = 1.3e-233 Identity = 440/561 (78.43%), Postives = 458/561 (81.64%), Query Frame = 0
BLAST of Spg007605 vs. TAIR 10
Match: AT5G45290.2 (RING/U-box superfamily protein ) HSP 1 Score: 131.7 bits (330), Expect = 1.9e-30 Identity = 80/169 (47.34%), Postives = 103/169 (60.95%), Query Frame = 0
BLAST of Spg007605 vs. TAIR 10
Match: AT5G45290.1 (RING/U-box superfamily protein ) HSP 1 Score: 131.3 bits (329), Expect = 2.5e-30 Identity = 79/166 (47.59%), Postives = 102/166 (61.45%), Query Frame = 0
BLAST of Spg007605 vs. TAIR 10
Match: AT5G52150.1 (RING/U-box superfamily protein ) HSP 1 Score: 60.5 bits (145), Expect = 5.4e-09 Identity = 23/65 (35.38%), Postives = 39/65 (60.00%), Query Frame = 0
BLAST of Spg007605 vs. TAIR 10
Match: AT1G35625.1 (RING/U-box superfamily protein ) HSP 1 Score: 58.9 bits (141), Expect = 1.6e-08 Identity = 20/57 (35.09%), Postives = 35/57 (61.40%), Query Frame = 0
BLAST of Spg007605 vs. TAIR 10
Match: AT3G61180.1 (RING/U-box superfamily protein ) HSP 1 Score: 58.5 bits (140), Expect = 2.0e-08 Identity = 22/37 (59.46%), Postives = 28/37 (75.68%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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