Spg007602 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg007602
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Centromere protein X
Location	scaffold2: 801420 .. 805398 (+)
RNA-Seq Expression	Spg007602
Synteny	Spg007602

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTTTGCAAACCTGACGCACGAGAGTGATGGGTGCAGGCCTTAATTTATGGCCCAACTTGAAGCCCAAATAAAGGGCATAGAAGTCATAAGCCCAAAGTAGACGTATATAAAGGCTGAAACTAGCGGCAATCAGAAAACAAATCAAAACGCTTGGTGCGGGATAAGTTGAAATTTGAAAGTTCCACTCGCAGTCGCCAGTTTCGCTCACCATGGAAGAGAGCGCATTCGATCCTGTAATTCCTTCATCTCTACGATCTATCTTTTGATTCGAAGTTCAATTCGTCGATTGTTTGTTCTCTTGAATGTCTACTACGTGTATGTTTTCCCTTTCTTAGCTGTTTGTTTGTATAATTTACAGGATCTGATTCACGCCATCTTCAAGCTCGAGTGGAGCAGAAAATCAAATGGTTCGGAATCACTCTATCCTTCTTTCTTTCTATCTTTTTTCAATTTTTCATTCCCTCCGATTCCAATCCTTTCTGATCGTTTCTTCATTTTGCCTCTGGTGCTCGGATTTCTTCAGAGCGCGAGAAAAACGAGAGTTCTGATGCTATGGATTGCGAGGTGATTCCCCTTCCCAGAGTTTCTCGCGAAATTTTCTGTTGAACTGTTATTGTCTTCTCTCGTGAAAATGTCTGTCATAGTTTTACGTTTCAATGTCGCCGGTGCTTAGGTAAATCTTGAAATGCTCGAGTTAGTTCTTGAAGTTCTCACGATTCCACCATTATCTTGCACATTTCTACTACCAAAAGTATGCACATGGCATAAGTTAGAAGTATATTAGCAAATTGGATATGTAGGCTAGCGAATTTGACTACAAACGTGTATCCATTAGCGGTTATCTATCTTGTTGTAAACTTGGAGTAAGGTTCTTACTCGACTAGACCAGTGGAGTTGATCTTTAGCTTCGTATTTGCTACAGGTTGACGCTGGAACATCCAAGAAGAGCAGGCCAATGTCTGGTATCATTAATTCAGCGTGCATTTTTCCATCGAGCTCGTGTCTTTGAATGATTACTGAGAGATGCAGAAACCATTTCTAACTTTGCTATTCCCATGCAGCCAATGCAAATGCACTTAAATTGAGCTCTAAACTTCTACAAATGTTTATCTCAGGTATCTATGGTGAAAAGTCAGATGCTTAATTTGGTGTCTAAGGTTTTTTCCCTTCTGCTTTTAGGTTAACTTTTCTATGTATGCAGAGGCCATACAGCGTGCTGCAACCATTGCTGAGGCTGAAGGTATTAGCAGAATTGAAGCCACTCATTTGGAGAGAATTCTTCCACAGTTGCTACTGGATTTTTGAGGTAGCATCCCGTTTCACACGTTTCAGTGTCTTGCTCTTGAAGATTCAGTTCTTCATTTATATTGTGATTATCTGGGACTTTTTAAAGTCCTGTCCAGGGATTTTTCTAGTGCAGAAAAGTAAAAGCCACCAGAACGTGAATGATAGATATAAGAGTAGGGTAGTAGAAAATTAGAATTAAAATGCTTTCCAAGGTTCATATTGTTAGGTAGGATGCCAGTGGGTTCATGCCGCCTCAATTACGTTTTATTGTTTGATACGTAATATTGAAGTTGTTCTATAGCTTGTGCATGATATTTTATGAAATGGCTTACTGAGATCGATAAGTGATCTGGACTGTAGTAGTAGCTCTTCTTAGTTCTTCCCGGTTCTCTTAAAGTGTCTCTCTGTATCCTGCAAGCGATGCTCCCCATCTTTCTAGACAGTGTTTTTCCATTTCCAAAATTGACGGTTAGGTTTGGCCTTGGAATATGCAAGCAGGTGATCAGAGGAAACACACATATATTAATATATGGAAATTTAATTGACATCGTACATCTTTGGAAGTAAAATGTAAATGAAGATAACATTCTTTTACATGCATTATTTATTTTAGACATTCTGAGAGTGAGGGGGAATTTCAGGTACATCGTGCTTGATCTGTGACAGCATGCATCTGACATCCTTACTGTTAGGCCTCTCTTTTGGATTCTCCATAGTGCAAAAGCAGGCAATTTTGAGGGCCAAGAGCATTTGCTCCTCCCAGCCATTTCCCTGGAGCTTCGGATCAATGGCTCTCCTAGGATTATCCGAAGTCATAACATTCTTCATCCACTTAACCAAACTCATCTCATCCGTGTCCTGGAAAAACTCATCAGATGGAAGTTTCCCAATCACCAAGACACCTAGCAGAACCCCAAAGCCGTATATATCGCACTTATCAGTGAACTTCAAGGTTTGATGATACTCTGGTGCGATGTATCCTACAGTACCTGCAACATTTGAAGCTGTCATGTGAGTTTGGGCGTCTGGCATTGCTTTTGCCAGCCCAAAATCAGCAATTCGAGCTTCCATGTTGTCATCAAGCAAAACATTTGCAGGCTTCAGATCCCTGTGAATAATACGTGGGGTATGGTTCATGTGAAGATACTCCAGCCCAGATGCCACTCCGATAGCAATCTTATGCCGAGTAAGCCAATCTAGTTCTTTCACTCCTGCTGAAACCTGATTCAACATATCTTGCAAGCTGCCATTCTTCATTAATTCATACACAAGGTAGTGGCAGTCAGGACGGAGGACATGGGCCACAAGAGGAAGAAGATTCCGATGCCGGATTTCACCCACAGTTCTGATCTCTGACTTGATCTGACGCATTTTCTTGTTCATAGACCTGCTATCCTCGTCAGCTAACTCGGCCGCGTCCTTTGGGGGTTGAGTTACCTTCTTTATTGCAAACATTTTCCCGCTTTTTTCTGGTAATTCGGCCTTGTAAACTTCTCCACATCCACCTTTTCCAATCAGCTCGAGTGATGCAAGCGCATCGTCTCTCTCTAGAAAAGCCAAATCCTCTCGTTTTATTAACTTGGGAGCAAAGATTGATGGGCCCGAATTCTTGCTTCCACCTTTTATAACTGCTATGACGATTTTAAACAGTAGAGAAAAGATAAACCCTGACAAACTTCCAGCAATTGCTCCTGCGAGGAATCCAAGTATCCAAGCAATTACCTTCTTTACTTTATTTTTCCGATGCCTATGAGTAAGGGATGTTGCGGGAGATGGAGCCTGAGCACTCGAAGTTGGCGCTGTGGCGGCGGCACTGTGCTTGCCTTTCGTAGTTGAATTCTCAGCTAACTTATAACGCTTGGGAACTTCGTTTGCCGAGTAGAGCTCGACGCCTTTCACGATGGGGGCTGAGCTTTCGAGAAGGCGATTTCCGGAGAAGTTGAAGACTCGAAGATTGCGAAAAGAACGAATTGAAGCTGGGATCTTCCCCGTGAAGTAGTTGTTGGCTATGGAGAGACTCTCCAAGTTGGGGAAATGCTTCAAGAAATCCAAACTCCCCGAGAACTTATTGGACGAAAGATCGATGACTCGAAGGCGAATCAACGAGGACAATCCAGATGGAACTTTGCCAGAAAACTGGTTGTTTTGGAGATCGAGAATTTCCAGTTTCCGGCAGTCAACAATTTGAGCTGGTACTTGGTCAACGAGGTGATTATTAGAAAACGTAAGCTCTTTCAACTCCGTGAGCCGCCCAATGGCTGGAGAAAGAGAACCGGCAAGTCCTTTGGACTTGAAAATGAGCCTGGTGATCCTCAAAACATAAGTGCCGTTGTCGGAGAGGCGCCGCTCGCAGAAGACACCGGCGAGGTCGCATGGGGAGGAGGAGAGTTGACCGCCAATGCCCAAGTCATTCTTGATGATGGAAAAGGCTCTGAGATCTGAAGGATCAAGGCTCAGCCGGGCATGGACTTGGAAAAGGATGGAGAGAAAGGCCAAGAAGGGAAGGAGTTTGGAGGAAGGCGAAGCCATTTTCCTGCGGCGTGTGAATGGAGTTGCAGGCAGTAAGGATAGACGTGGTCTTCTTCTTTATAGGCGGCTGTATTAATGGAAAACGGGATCGCACTGGGATCGGTGGAGCCCAGTTTAATTATTTTTCACCCTTTCCACAAAGGTTGATTTGTCTGATTTCTT

mRNA sequence

ATGGAAGAGAGCGCATTCGATCCTGATCTGATTCACGCCATCTTCAAGCTCGAGTGGAGCAGAAAATCAAATGGTTCGGAATCACTCTATCCTTCTTTCTTTCTATCTTTTTTCAATTTTTCATTCCCTCCGATTCCAATCCTTTCTGATCGTTTCTTCATTTTGCCTCTGGTGCTCGGATTTCTTCAGAGCGCGAGAAAAACGAGAGTTCTGATGCTATGGATTGCGAGGCTAGCGAATTTGACTACAAACGTGTATCCATTAGCGGTTATCTATCTTGTTGACGCTGGAACATCCAAGAAGAGCAGGCCAATGTCTGCCAATGCAAATGCACTTAAATTGAGCTCTAAACTTCTACAAATGTTTATCTCAGAGGCCATACAGCGTGCTGCAACCATTGCTGAGGCTGAAGGTATTAGCAGAATTGAAGCCACTCATTTGGAGAGAATTCTTCCACAGTTGCTACTGGATTTTTGA

Coding sequence (CDS)

ATGGAAGAGAGCGCATTCGATCCTGATCTGATTCACGCCATCTTCAAGCTCGAGTGGAGCAGAAAATCAAATGGTTCGGAATCACTCTATCCTTCTTTCTTTCTATCTTTTTTCAATTTTTCATTCCCTCCGATTCCAATCCTTTCTGATCGTTTCTTCATTTTGCCTCTGGTGCTCGGATTTCTTCAGAGCGCGAGAAAAACGAGAGTTCTGATGCTATGGATTGCGAGGCTAGCGAATTTGACTACAAACGTGTATCCATTAGCGGTTATCTATCTTGTTGACGCTGGAACATCCAAGAAGAGCAGGCCAATGTCTGCCAATGCAAATGCACTTAAATTGAGCTCTAAACTTCTACAAATGTTTATCTCAGAGGCCATACAGCGTGCTGCAACCATTGCTGAGGCTGAAGGTATTAGCAGAATTGAAGCCACTCATTTGGAGAGAATTCTTCCACAGTTGCTACTGGATTTTTGA

Protein sequence

MEESAFDPDLIHAIFKLEWSRKSNGSESLYPSFFLSFFNFSFPPIPILSDRFFILPLVLGFLQSARKTRVLMLWIARLANLTTNVYPLAVIYLVDAGTSKKSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF

Homology

[Close]

BLAST of Spg007602 vs. NCBI nr
Match: XP_023516676.1 (protein MHF2 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 133.3 bits (334), Expect = 1.9e-27
Identity = 86/158 (54.43%), Postives = 95/158 (60.13%), Query Frame = 0


Query: 1   MEESAFDPDLIHAIFKLEWSRKSNGSESLYPSFFLSFFNFSFPPIPILSDRFFILPLVLG 60
           MEES FDPDLIHAIFKLEWSR+S                                     
Sbjct: 1   MEESTFDPDLIHAIFKLEWSRRS------------------------------------- 60

Query: 61  FLQSARKTRVLMLWIARLANLTTNVYPLAVIYLVDAGTSKKSRPMSANANALKLSSKLLQ 120
                         + R  N +++    A+   VDAGTSKKSRPMSANANALKLSSKLLQ
Sbjct: 61  --------------LEREKNESSD----AMDCEVDAGTSKKSRPMSANANALKLSSKLLQ 103

Query: 121 MFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF 159
           +F+SEA+QRAATIAEAEGISRIEATHLERILPQLLLDF
Sbjct: 121 IFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF 103

[Close]

BLAST of Spg007602 vs. NCBI nr
Match: XP_038879195.1 (protein MHF2 homolog isoform X1 [Benincasa hispida])

HSP 1 Score: 132.5 bits (332), Expect = 3.2e-27
Identity = 84/158 (53.16%), Postives = 92/158 (58.23%), Query Frame = 0


Query: 1   MEESAFDPDLIHAIFKLEWSRKSNGSESLYPSFFLSFFNFSFPPIPILSDRFFILPLVLG 60
           MEE+AF PDLIHAIFKLEWSR+S   E                                 
Sbjct: 1   MEENAFHPDLIHAIFKLEWSRRSLEREK-------------------------------- 60

Query: 61  FLQSARKTRVLMLWIARLANLTTNVYPLAVIYLVDAGTSKKSRPMSANANALKLSSKLLQ 120
                                  N  P A+   VDAGTSKKSRPMSANANALKLSSKL+Q
Sbjct: 61  -----------------------NENPDAMDCEVDAGTSKKSRPMSANANALKLSSKLVQ 103

Query: 121 MFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF 159
           +F+SEA+QRAATIAEAEGI+RIEATHLERILPQLLLDF
Sbjct: 121 IFVSEAVQRAATIAEAEGINRIEATHLERILPQLLLDF 103

[Close]

BLAST of Spg007602 vs. NCBI nr
Match: XP_022987126.1 (protein MHF2 homolog [Cucurbita maxima])

HSP 1 Score: 132.1 bits (331), Expect = 4.2e-27
Identity = 85/158 (53.80%), Postives = 95/158 (60.13%), Query Frame = 0


Query: 1   MEESAFDPDLIHAIFKLEWSRKSNGSESLYPSFFLSFFNFSFPPIPILSDRFFILPLVLG 60
           MEES FDPDLIHAIFKLEW+R+S                                     
Sbjct: 1   MEESTFDPDLIHAIFKLEWTRRS------------------------------------- 60

Query: 61  FLQSARKTRVLMLWIARLANLTTNVYPLAVIYLVDAGTSKKSRPMSANANALKLSSKLLQ 120
                         + R  N +++    A+   VDAGTSKKSRPMSANANALKLSSKLLQ
Sbjct: 61  --------------LEREKNESSD----AMDCEVDAGTSKKSRPMSANANALKLSSKLLQ 103

Query: 121 MFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF 159
           +F+SEA+QRAATIAEAEGISRIEATHLERILPQLLLDF
Sbjct: 121 IFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF 103

[Close]

BLAST of Spg007602 vs. NCBI nr
Match: XP_022921828.1 (protein MHF2 homolog [Cucurbita moschata])

HSP 1 Score: 132.1 bits (331), Expect = 4.2e-27
Identity = 85/158 (53.80%), Postives = 95/158 (60.13%), Query Frame = 0


Query: 1   MEESAFDPDLIHAIFKLEWSRKSNGSESLYPSFFLSFFNFSFPPIPILSDRFFILPLVLG 60
           MEES FDPDLIHAIFKLEWSR+S                                     
Sbjct: 1   MEESTFDPDLIHAIFKLEWSRRS------------------------------------- 60

Query: 61  FLQSARKTRVLMLWIARLANLTTNVYPLAVIYLVDAGTSKKSRPMSANANALKLSSKLLQ 120
                         + R  N +++    A+   VDAGTSKKSRPMSANANALKL+SKLLQ
Sbjct: 61  --------------LEREKNESSD----AMDCEVDAGTSKKSRPMSANANALKLTSKLLQ 103

Query: 121 MFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF 159
           +F+SEA+QRAATIAEAEGISRIEATHLERILPQLLLDF
Sbjct: 121 IFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF 103

[Close]

BLAST of Spg007602 vs. NCBI nr
Match: KAG6589406.1 (Protein JINGUBANG, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 132.1 bits (331), Expect = 4.2e-27
Identity = 85/158 (53.80%), Postives = 95/158 (60.13%), Query Frame = 0


Query: 1   MEESAFDPDLIHAIFKLEWSRKSNGSESLYPSFFLSFFNFSFPPIPILSDRFFILPLVLG 60
           MEES FDPDLIHAIFKLEWSR+S                                     
Sbjct: 335 MEESTFDPDLIHAIFKLEWSRRS------------------------------------- 394

Query: 61  FLQSARKTRVLMLWIARLANLTTNVYPLAVIYLVDAGTSKKSRPMSANANALKLSSKLLQ 120
                         + R  N +++    A+   VDAGTSKKSRPMSANANALKL+SKLLQ
Sbjct: 395 --------------LEREKNESSD----AMDCEVDAGTSKKSRPMSANANALKLTSKLLQ 437

Query: 121 MFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF 159
           +F+SEA+QRAATIAEAEGISRIEATHLERILPQLLLDF
Sbjct: 455 IFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF 437

[Close]

BLAST of Spg007602 vs. ExPASy Swiss-Prot
Match: Q8L7N3 (Protein MHF2 homolog OS=Arabidopsis thaliana OX=3702 GN=MHF2 PE=3 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 6.3e-18
Identity = 49/65 (75.38%), Postives = 57/65 (87.69%), Query Frame = 0


Query: 94  VDAGTSKKSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQ 153
           V  GT+KK+R  SANANALKLS +LL+ F+SEA+QRAA IAEAEG+ +IEATHLERILPQ
Sbjct: 40  VALGTTKKNRLASANANALKLSCELLKSFVSEAVQRAAIIAEAEGMEKIEATHLERILPQ 99

Query: 154 LLLDF 159
           LLLDF
Sbjct: 100 LLLDF 104

[Close]

BLAST of Spg007602 vs. ExPASy Swiss-Prot
Match: P0DJH7 (Centromere protein X OS=Gallus gallus OX=9031 GN=CENPX PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 4.2e-06
Identity = 25/51 (49.02%), Postives = 39/51 (76.47%), Query Frame = 0


Query: 108 NANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF 159
           N +AL L ++LL++F+ EA  RAA  A+AE + +++  H+E++LPQLLLDF
Sbjct: 29  NGDALLLMAELLKVFVREAAARAARQAQAEDLEKVDIEHVEKVLPQLLLDF 79

[Close]

BLAST of Spg007602 vs. ExPASy Swiss-Prot
Match: Q2NKU0 (Centromere protein X OS=Bos taurus OX=9913 GN=CENPX PE=3 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 2.7e-05
Identity = 24/58 (41.38%), Postives = 41/58 (70.69%), Query Frame = 0


Query: 101 KSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF 159
           K +    + +AL+L ++LL++F+ EA  R+   A+AEG++ ++   LE++LPQLLLDF
Sbjct: 22  KDKKTKVSGDALQLVAELLKIFVVEAAIRSVRQAQAEGLAHVDVEQLEKVLPQLLLDF 79

[Close]

BLAST of Spg007602 vs. ExPASy TrEMBL
Match: A0A6J1JD93 (protein MHF2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111484772 PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 2.0e-27
Identity = 85/158 (53.80%), Postives = 95/158 (60.13%), Query Frame = 0


Query: 1   MEESAFDPDLIHAIFKLEWSRKSNGSESLYPSFFLSFFNFSFPPIPILSDRFFILPLVLG 60
           MEES FDPDLIHAIFKLEW+R+S                                     
Sbjct: 1   MEESTFDPDLIHAIFKLEWTRRS------------------------------------- 60

Query: 61  FLQSARKTRVLMLWIARLANLTTNVYPLAVIYLVDAGTSKKSRPMSANANALKLSSKLLQ 120
                         + R  N +++    A+   VDAGTSKKSRPMSANANALKLSSKLLQ
Sbjct: 61  --------------LEREKNESSD----AMDCEVDAGTSKKSRPMSANANALKLSSKLLQ 103

Query: 121 MFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF 159
           +F+SEA+QRAATIAEAEGISRIEATHLERILPQLLLDF
Sbjct: 121 IFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF 103

[Close]

BLAST of Spg007602 vs. ExPASy TrEMBL
Match: A0A6J1E4X1 (protein MHF2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111429969 PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 2.0e-27
Identity = 85/158 (53.80%), Postives = 95/158 (60.13%), Query Frame = 0


Query: 1   MEESAFDPDLIHAIFKLEWSRKSNGSESLYPSFFLSFFNFSFPPIPILSDRFFILPLVLG 60
           MEES FDPDLIHAIFKLEWSR+S                                     
Sbjct: 1   MEESTFDPDLIHAIFKLEWSRRS------------------------------------- 60

Query: 61  FLQSARKTRVLMLWIARLANLTTNVYPLAVIYLVDAGTSKKSRPMSANANALKLSSKLLQ 120
                         + R  N +++    A+   VDAGTSKKSRPMSANANALKL+SKLLQ
Sbjct: 61  --------------LEREKNESSD----AMDCEVDAGTSKKSRPMSANANALKLTSKLLQ 103

Query: 121 MFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF 159
           +F+SEA+QRAATIAEAEGISRIEATHLERILPQLLLDF
Sbjct: 121 IFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF 103

[Close]

BLAST of Spg007602 vs. ExPASy TrEMBL
Match: A0A6J1C4N9 (protein MHF2 homolog OS=Momordica charantia OX=3673 GN=LOC111007351 PE=3 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 7.7e-27
Identity = 86/158 (54.43%), Postives = 95/158 (60.13%), Query Frame = 0


Query: 1   MEESAFDPDLIHAIFKLEWSRKSNGSESLYPSFFLSFFNFSFPPIPILSDRFFILPLVLG 60
           MEESAFD DLIHAIFKLEWSR+S                                     
Sbjct: 1   MEESAFDHDLIHAIFKLEWSRRS------------------------------------- 60

Query: 61  FLQSARKTRVLMLWIARLANLTTNVYPLAVIYLVDAGTSKKSRPMSANANALKLSSKLLQ 120
                         + R  N +++    A+   V+AGTSKKSRPMSANANALKLSSKLLQ
Sbjct: 61  --------------LERERNESSD----AMDCEVEAGTSKKSRPMSANANALKLSSKLLQ 103

Query: 121 MFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF 159
           +FISEA+QRAATIAEAEGISRIEATHLERILPQLLLDF
Sbjct: 121 IFISEAVQRAATIAEAEGISRIEATHLERILPQLLLDF 103

[Close]

BLAST of Spg007602 vs. ExPASy TrEMBL
Match: A0A1S3CLK5 (centromere protein X isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502356 PE=3 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 7.2e-25
Identity = 82/160 (51.25%), Postives = 89/160 (55.62%), Query Frame = 0


Query: 1   MEESAFDPDLIHAIFKLEWSRKSNGSESLYPSFFLSFFNFSFPPIPILSDRFFILPLVLG 60
           MEE+ F PDLIHAIFKLEWSR+S   E                                 
Sbjct: 1   MEETGFHPDLIHAIFKLEWSRRSLEREK-------------------------------- 60

Query: 61  FLQSARKTRVLMLWIARLANLTTNVYPLAVIYLVD--AGTSKKSRPMSANANALKLSSKL 120
                                  N  P A+   VD  AGTSKKSRPMSANANALKLSSKL
Sbjct: 61  -----------------------NENPDAMDCEVDAGAGTSKKSRPMSANANALKLSSKL 105

Query: 121 LQMFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF 159
           +Q+FISEA+QRAATIAEAEGI RIE THLER+LPQLLLDF
Sbjct: 121 VQIFISEAVQRAATIAEAEGIGRIEPTHLERVLPQLLLDF 105

[Close]

BLAST of Spg007602 vs. ExPASy TrEMBL
Match: A0A0A0LU58 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G002850 PE=3 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 2.7e-24
Identity = 82/160 (51.25%), Postives = 89/160 (55.62%), Query Frame = 0


Query: 1   MEESAFDPDLIHAIFKLEWSRKSNGSESLYPSFFLSFFNFSFPPIPILSDRFFILPLVLG 60
           MEE+ F PDLIHAIFKLEWSR+S                                     
Sbjct: 72  MEETGFHPDLIHAIFKLEWSRRS------------------------------------- 131

Query: 61  FLQSARKTRVLMLWIARLANLTTNVYPLAVIYLVD--AGTSKKSRPMSANANALKLSSKL 120
                            L        P A+   VD  AGTSKKSRPMSANANALKLSSKL
Sbjct: 132 -----------------LEREKNENNPDAMDCEVDAGAGTSKKSRPMSANANALKLSSKL 177

Query: 121 LQMFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF 159
           +Q+FISEA+QRAATIAEAEGISRIE THLER+LPQLLLDF
Sbjct: 192 VQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF 177

[Close]

BLAST of Spg007602 vs. TAIR 10
Match: AT1G78790.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2008 (InterPro:IPR018552); Has 69 Blast hits to 69 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 33; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 92.0 bits (227), Expect = 4.5e-19
Identity = 49/65 (75.38%), Postives = 57/65 (87.69%), Query Frame = 0


Query: 94  VDAGTSKKSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQ 153
           V  GT+KK+R  SANANALKLS +LL+ F+SEA+QRAA IAEAEG+ +IEATHLERILPQ
Sbjct: 40  VALGTTKKNRLASANANALKLSCELLKSFVSEAVQRAAIIAEAEGMEKIEATHLERILPQ 99

Query: 154 LLLDF 159
           LLLDF
Sbjct: 100 LLLDF 104

[Close]

BLAST of Spg007602 vs. TAIR 10
Match: AT1G78790.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2008 (InterPro:IPR018552); Has 27 Blast hits to 27 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 59.7 bits (143), Expect = 2.5e-09
Identity = 33/59 (55.93%), Postives = 41/59 (69.49%), Query Frame = 0


Query: 100 KKSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF 159
           ++S  + A    + L +       SEA+QRAA IAEAEG+ +IEATHLERILPQLLLDF
Sbjct: 28  ERSDAIDATEAEVALGTTKKNRLASEAVQRAAIIAEAEGMEKIEATHLERILPQLLLDF 86

The following BLAST results are available for this feature:

BLAST of Spg007602 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023516676.1	1.9e-27	54.43	protein MHF2 homolog [Cucurbita pepo subsp. pepo]	[more]
XP_038879195.1	3.2e-27	53.16	protein MHF2 homolog isoform X1 [Benincasa hispida]	[more]
XP_022987126.1	4.2e-27	53.80	protein MHF2 homolog [Cucurbita maxima]	[more]
XP_022921828.1	4.2e-27	53.80	protein MHF2 homolog [Cucurbita moschata]	[more]
KAG6589406.1	4.2e-27	53.80	Protein JINGUBANG, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Spg007602 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L7N3	6.3e-18	75.38	Protein MHF2 homolog OS=Arabidopsis thaliana OX=3702 GN=MHF2 PE=3 SV=1	[more]
P0DJH7	4.2e-06	49.02	Centromere protein X OS=Gallus gallus OX=9031 GN=CENPX PE=1 SV=1	[more]
Q2NKU0	2.7e-05	41.38	Centromere protein X OS=Bos taurus OX=9913 GN=CENPX PE=3 SV=1	[more]

BLAST of Spg007602 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JD93	2.0e-27	53.80	protein MHF2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111484772 PE=3 SV=1	[more]
A0A6J1E4X1	2.0e-27	53.80	protein MHF2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111429969 PE=3 SV=1	[more]
A0A6J1C4N9	7.7e-27	54.43	protein MHF2 homolog OS=Momordica charantia OX=3673 GN=LOC111007351 PE=3 SV=1	[more]
A0A1S3CLK5	7.2e-25	51.25	centromere protein X isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502356 PE=3 SV=...	[more]
A0A0A0LU58	2.7e-24	51.25	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G002850 PE=3 SV=1	[more]

BLAST of Spg007602 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G78790.1	4.5e-19	75.38	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2008...	[more]
AT1G78790.2	2.5e-09	55.93	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	6.10.130.30		coord: 117..158 e-value: 4.2E-17 score: 64.0
IPR018552	Centromere protein X	PFAM	PF09415	CENP-X	coord: 105..158 e-value: 9.9E-15 score: 54.6
IPR018552	Centromere protein X	PANTHER	PTHR28680	CENTROMERE PROTEIN X	coord: 2..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg007602.1	Spg007602.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
biological_process	GO:0051382	kinetochore assembly