Spg007572 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg007572
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	protein indeterminate-domain 16
Location	scaffold2: 409154 .. 409675 (-)
RNA-Seq Expression	Spg007572
Synteny	Spg007572

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGATGAAGATCAGAAAGAATTGCAGCTCCTTCCGACGGGTCACAGCTCTCTAGCGTCGTCGTCGTCCCATTCCCACATGTCGTCTCGTCCATCGGAGTCGTCGTTACGGTTCCGGTCGGATCCATTATTCGAGGCGGCGGGTGCAGGAGCAGGAGCAGGAGGTGGGTCGGTGGACCTGCAGCTATCGATAAGCCTGAGGCCAATGTTCAAGTACGAGGAGGTGAAGGTGATGAAGCCGGAGGCGGCGAGCTGCGTGGAGGCGCTGAAGTGGCAGGCGGCGGAGCAAATACGGCTGGCGGCGATGGAAAAGGCGTACGCGGAGAGAGTTCGAGAGCTGACGAAGAGGGAAATAGAATTGGCGCAAACGGAATTCGCAAGGGCTCGGCAGATGTGGGAAAGGGCAAGAGAGGAACTCGAAAAGGCCGAGCGAATCAAAGACCGAGCCACTCGCCAGATGGACTCTACGTGCATGGAGATCACTTGCCAATCTTGCAGGCACAGGTTCCGCCCTTCTTGA

mRNA sequence

ATGGAAGATGAAGATCAGAAAGAATTGCAGCTCCTTCCGACGGGTCACAGCTCTCTAGCGTCGTCGTCGTCCCATTCCCACATGTCGTCTCGTCCATCGGAGTCGTCGTTACGGTTCCGGTCGGATCCATTATTCGAGGCGGCGGGTGCAGGAGCAGGAGCAGGAGGTGGGTCGGTGGACCTGCAGCTATCGATAAGCCTGAGGCCAATGTTCAAGTACGAGGAGGTGAAGGTGATGAAGCCGGAGGCGGCGAGCTGCGTGGAGGCGCTGAAGTGGCAGGCGGCGGAGCAAATACGGCTGGCGGCGATGGAAAAGGCGTACGCGGAGAGAGTTCGAGAGCTGACGAAGAGGGAAATAGAATTGGCGCAAACGGAATTCGCAAGGGCTCGGCAGATGTGGGAAAGGGCAAGAGAGGAACTCGAAAAGGCCGAGCGAATCAAAGACCGAGCCACTCGCCAGATGGACTCTACGTGCATGGAGATCACTTGCCAATCTTGCAGGCACAGGTTCCGCCCTTCTTGA

Coding sequence (CDS)

ATGGAAGATGAAGATCAGAAAGAATTGCAGCTCCTTCCGACGGGTCACAGCTCTCTAGCGTCGTCGTCGTCCCATTCCCACATGTCGTCTCGTCCATCGGAGTCGTCGTTACGGTTCCGGTCGGATCCATTATTCGAGGCGGCGGGTGCAGGAGCAGGAGCAGGAGGTGGGTCGGTGGACCTGCAGCTATCGATAAGCCTGAGGCCAATGTTCAAGTACGAGGAGGTGAAGGTGATGAAGCCGGAGGCGGCGAGCTGCGTGGAGGCGCTGAAGTGGCAGGCGGCGGAGCAAATACGGCTGGCGGCGATGGAAAAGGCGTACGCGGAGAGAGTTCGAGAGCTGACGAAGAGGGAAATAGAATTGGCGCAAACGGAATTCGCAAGGGCTCGGCAGATGTGGGAAAGGGCAAGAGAGGAACTCGAAAAGGCCGAGCGAATCAAAGACCGAGCCACTCGCCAGATGGACTCTACGTGCATGGAGATCACTTGCCAATCTTGCAGGCACAGGTTCCGCCCTTCTTGA

Protein sequence

MEDEDQKELQLLPTGHSSLASSSSHSHMSSRPSESSLRFRSDPLFEAAGAGAGAGGGSVDLQLSISLRPMFKYEEVKVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREELEKAERIKDRATRQMDSTCMEITCQSCRHRFRPS

Homology

[Close]

BLAST of Spg007572 vs. NCBI nr
Match: XP_008464429.1 (PREDICTED: protein indeterminate-domain 16 [Cucumis melo] >TYJ98452.1 protein indeterminate-domain 16 [Cucumis melo var. makuwa])

HSP 1 Score: 251.5 bits (641), Expect = 5.2e-63
Identity = 151/183 (82.51%), Postives = 157/183 (85.79%), Query Frame = 0


Query: 1   MEDEDQKELQLLPTGHSSLASSSSHSHMSSRPSESSLRFRSDPLFEAAGAGAGAGGGSVD 60
           MEDEDQKELQLLPT H S+ASSS  SHMSSRPS+SSLRFRSDP FEA        GGSVD
Sbjct: 1   MEDEDQKELQLLPTPH-SIASSS--SHMSSRPSDSSLRFRSDP-FEA------GSGGSVD 60

Query: 61  LQLSISLRP----------MFKYEEVKVMKPEAASCVEALKWQAAEQIRLAAMEKAYAER 120
           LQLSISLRP          +FKYEE  VMKPEAASCVEALKWQAAEQIRLAAMEKAYAER
Sbjct: 61  LQLSISLRPIRPVTAGGECLFKYEE--VMKPEAASCVEALKWQAAEQIRLAAMEKAYAER 120

Query: 121 VRELTKREIELAQTEFARARQMWERAREELEKAERIKDRATRQMDSTCMEITCQSCRHRF 174
           VRELTKREIELAQTEFARARQMWERAREE+EKAER+K+RATRQMDSTCMEITCQSCR RF
Sbjct: 121 VRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRF 171

[Close]

BLAST of Spg007572 vs. NCBI nr
Match: XP_004138047.1 (protein indeterminate-domain 16 [Cucumis sativus])

HSP 1 Score: 251.1 bits (640), Expect = 6.8e-63
Identity = 149/185 (80.54%), Postives = 157/185 (84.86%), Query Frame = 0


Query: 1   MEDEDQKELQLLPTGHSSLASSSSHSHMSSRPSE-SSLRFRSDPLFEAAGAGAGAGGGSV 60
           MEDEDQKELQLLPT HS   +SSS SH+SSRPS+ SSLRFRSDPLFEA        GGSV
Sbjct: 1   MEDEDQKELQLLPTPHS--IASSSTSHISSRPSDSSSLRFRSDPLFEA------GSGGSV 60

Query: 61  DLQLSISLRP-----------MFKYEEVKVMKPEAASCVEALKWQAAEQIRLAAMEKAYA 120
           DLQLSISLRP           +FKYEE  VMKPEAASCV+ALKWQAAEQIRLAAMEKAYA
Sbjct: 61  DLQLSISLRPIRPVTAGGAECLFKYEE--VMKPEAASCVDALKWQAAEQIRLAAMEKAYA 120

Query: 121 ERVRELTKREIELAQTEFARARQMWERAREELEKAERIKDRATRQMDSTCMEITCQSCRH 174
           ERVRELTKREIELAQTEFARARQMWERAREE+EKAER+K+RATRQMDSTCMEITCQSCR 
Sbjct: 121 ERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQ 175

[Close]

BLAST of Spg007572 vs. NCBI nr
Match: XP_038878928.1 (protein indeterminate-domain 16 [Benincasa hispida])

HSP 1 Score: 250.8 bits (639), Expect = 8.8e-63
Identity = 151/180 (83.89%), Postives = 157/180 (87.22%), Query Frame = 0


Query: 1   MEDEDQKELQLLPTGHSSLASSSSHSHMSSRPSESSLRFRSDPLFEAAGAGAGAGGGSVD 60
           MEDEDQKELQLLPT H S+ASSS  SHMSSRPS+SSLRFRSD  FEAAG       GSVD
Sbjct: 1   MEDEDQKELQLLPTPH-SIASSS--SHMSSRPSDSSLRFRSD-AFEAAGP------GSVD 60

Query: 61  LQLSISLRP-------MFKYEEVKVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRE 120
           LQLSISLRP       +FKYEE  VMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRE
Sbjct: 61  LQLSISLRPIRPAAECLFKYEE--VMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRE 120

Query: 121 LTKREIELAQTEFARARQMWERAREELEKAERIKDRATRQMDSTCMEITCQSCRHRFRPS 174
           LTKREIELAQTEFARARQMWERAREE+EKAER+K+RATRQMDSTCMEITCQSCR RFRPS
Sbjct: 121 LTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS 168

[Close]

BLAST of Spg007572 vs. NCBI nr
Match: KAA0057771.1 (protein indeterminate-domain 16 [Cucumis melo var. makuwa])

HSP 1 Score: 250.0 bits (637), Expect = 1.5e-62
Identity = 150/183 (81.97%), Postives = 157/183 (85.79%), Query Frame = 0


Query: 1   MEDEDQKELQLLPTGHSSLASSSSHSHMSSRPSESSLRFRSDPLFEAAGAGAGAGGGSVD 60
           MEDEDQKELQLLPT H S+ASSS  SHMSSRPS+SSLRFRSDP FEA        GGSVD
Sbjct: 1   MEDEDQKELQLLPTPH-SIASSS--SHMSSRPSDSSLRFRSDP-FEA------GSGGSVD 60

Query: 61  LQLSISLRP----------MFKYEEVKVMKPEAASCVEALKWQAAEQIRLAAMEKAYAER 120
           LQLSISLRP          +FKYEE  VMKPEAASCVEALKWQAAEQIRLAA+EKAYAER
Sbjct: 61  LQLSISLRPIRPVTAGGECLFKYEE--VMKPEAASCVEALKWQAAEQIRLAAIEKAYAER 120

Query: 121 VRELTKREIELAQTEFARARQMWERAREELEKAERIKDRATRQMDSTCMEITCQSCRHRF 174
           VRELTKREIELAQTEFARARQMWERAREE+EKAER+K+RATRQMDSTCMEITCQSCR RF
Sbjct: 121 VRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRF 171

[Close]

BLAST of Spg007572 vs. NCBI nr
Match: XP_022921773.1 (protein indeterminate-domain 16-like [Cucurbita moschata])

HSP 1 Score: 245.4 bits (625), Expect = 3.7e-61
Identity = 144/180 (80.00%), Postives = 153/180 (85.00%), Query Frame = 0


Query: 1   MEDEDQKELQLLPTGHSSLASSSSHSHMSSRPSESSLRFRSDPLFEAAGAGAGAGGGSVD 60
           MEDEDQKELQLLPT H ++ASSSS SHMSSRPS SS+RFRSDP          AG GS+D
Sbjct: 1   MEDEDQKELQLLPTPH-TIASSSSSSHMSSRPSASSMRFRSDPY--------EAGPGSLD 60

Query: 61  LQLSISLRP-------MFKYEEVKVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRE 120
           LQLSIS+RP       +FKYEE  VMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRE
Sbjct: 61  LQLSISVRPIRPTAECVFKYEE--VMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRE 120

Query: 121 LTKREIELAQTEFARARQMWERAREELEKAERIKDRATRQMDSTCMEITCQSCRHRFRPS 174
           LTKREIELAQTEF RARQMWERAREE+EKAER+K+RATRQMDSTCMEITCQSCR RFR S
Sbjct: 121 LTKREIELAQTEFGRARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRAS 169

[Close]

BLAST of Spg007572 vs. ExPASy Swiss-Prot
Match: F4IPE3 (Zinc finger protein SHOOT GRAVITROPISM 5 OS=Arabidopsis thaliana OX=3702 GN=SGR5 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.4e-09
Identity = 33/79 (41.77%), Postives = 61/79 (77.22%), Query Frame = 0


Query: 94  AAEQI-RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREELEKAERIKDRATR 153
           A+EQI ++A  EKAYAE  +   KR+ E+A+ EFA A+++ ++A+ ELE+A+ +K+++ +
Sbjct: 335 ASEQIMKIAMKEKAYAEEAKREAKRQREIAENEFANAKKIRQKAQAELERAKFLKEQSMK 394

Query: 154 QMDSTCMEITCQSCRHRFR 172
           ++ ST M++TCQ+C+ +F+
Sbjct: 395 KISSTIMQVTCQTCKGQFQ 413

[Close]

BLAST of Spg007572 vs. ExPASy Swiss-Prot
Match: Q9FRH4 (Protein indeterminate-domain 16 OS=Arabidopsis thaliana OX=3702 GN=IDD16 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 9.3e-07
Identity = 28/68 (41.18%), Postives = 48/68 (70.59%), Query Frame = 0


Query: 104 EKAYAERVRELTKREIELAQTEFARARQMWERAREELEKAERIKDRATRQMDSTCMEITC 163
           E   AE  R+  KR+IE+A+ +F +A+++ E A+ ELEKA  +++ A +++++T MEITC
Sbjct: 268 EARKAEETRQEAKRQIEMAEKDFEKAKRIREEAKTELEKAHVVREEAIKRINATMMEITC 327

Query: 164 QSCRHRFR 172
            SC+  F+
Sbjct: 328 HSCKQLFQ 335

[Close]

BLAST of Spg007572 vs. ExPASy Swiss-Prot
Match: Q9C9X7 (Protein indeterminate-domain 14 OS=Arabidopsis thaliana OX=3702 GN=IDD14 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 3.5e-06
Identity = 39/118 (33.05%), Postives = 66/118 (55.93%), Query Frame = 0


Query: 57  GSVDLQLSISLRPMFKYE---EVKVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRE 116
           GS++LQL  S     +      +  M  +  S VE   ++  E     ++E+   E  R 
Sbjct: 267 GSIELQLLPSRNCADETSLSLSIGTMDQKTMSEVEKKSYEKGE----TSLER---EEARR 326

Query: 117 LTKREIELAQTEFARARQMWERAREELEKAERIKDRATRQMDSTCMEITCQSCRHRFR 172
            TKR+IE+A+ EFA A+++ + AR EL KA   ++ A+R++ +T M+ITC +C+  F+
Sbjct: 327 ETKRQIEIAELEFAEAKRIRQHARAELHKAHLFREEASRRISATMMQITCHNCKQHFQ 377

[Close]

BLAST of Spg007572 vs. ExPASy TrEMBL
Match: A0A5D3BFD1 (Protein indeterminate-domain 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00530 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 2.5e-63
Identity = 151/183 (82.51%), Postives = 157/183 (85.79%), Query Frame = 0


Query: 1   MEDEDQKELQLLPTGHSSLASSSSHSHMSSRPSESSLRFRSDPLFEAAGAGAGAGGGSVD 60
           MEDEDQKELQLLPT H S+ASSS  SHMSSRPS+SSLRFRSDP FEA        GGSVD
Sbjct: 1   MEDEDQKELQLLPTPH-SIASSS--SHMSSRPSDSSLRFRSDP-FEA------GSGGSVD 60

Query: 61  LQLSISLRP----------MFKYEEVKVMKPEAASCVEALKWQAAEQIRLAAMEKAYAER 120
           LQLSISLRP          +FKYEE  VMKPEAASCVEALKWQAAEQIRLAAMEKAYAER
Sbjct: 61  LQLSISLRPIRPVTAGGECLFKYEE--VMKPEAASCVEALKWQAAEQIRLAAMEKAYAER 120

Query: 121 VRELTKREIELAQTEFARARQMWERAREELEKAERIKDRATRQMDSTCMEITCQSCRHRF 174
           VRELTKREIELAQTEFARARQMWERAREE+EKAER+K+RATRQMDSTCMEITCQSCR RF
Sbjct: 121 VRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRF 171

[Close]

BLAST of Spg007572 vs. ExPASy TrEMBL
Match: A0A1S3CN02 (protein indeterminate-domain 16 OS=Cucumis melo OX=3656 GN=LOC103502321 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 2.5e-63
Identity = 151/183 (82.51%), Postives = 157/183 (85.79%), Query Frame = 0


Query: 1   MEDEDQKELQLLPTGHSSLASSSSHSHMSSRPSESSLRFRSDPLFEAAGAGAGAGGGSVD 60
           MEDEDQKELQLLPT H S+ASSS  SHMSSRPS+SSLRFRSDP FEA        GGSVD
Sbjct: 1   MEDEDQKELQLLPTPH-SIASSS--SHMSSRPSDSSLRFRSDP-FEA------GSGGSVD 60

Query: 61  LQLSISLRP----------MFKYEEVKVMKPEAASCVEALKWQAAEQIRLAAMEKAYAER 120
           LQLSISLRP          +FKYEE  VMKPEAASCVEALKWQAAEQIRLAAMEKAYAER
Sbjct: 61  LQLSISLRPIRPVTAGGECLFKYEE--VMKPEAASCVEALKWQAAEQIRLAAMEKAYAER 120

Query: 121 VRELTKREIELAQTEFARARQMWERAREELEKAERIKDRATRQMDSTCMEITCQSCRHRF 174
           VRELTKREIELAQTEFARARQMWERAREE+EKAER+K+RATRQMDSTCMEITCQSCR RF
Sbjct: 121 VRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRF 171

[Close]

BLAST of Spg007572 vs. ExPASy TrEMBL
Match: A0A0A0LRS8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G001530 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 3.3e-63
Identity = 149/185 (80.54%), Postives = 157/185 (84.86%), Query Frame = 0


Query: 1   MEDEDQKELQLLPTGHSSLASSSSHSHMSSRPSE-SSLRFRSDPLFEAAGAGAGAGGGSV 60
           MEDEDQKELQLLPT HS   +SSS SH+SSRPS+ SSLRFRSDPLFEA        GGSV
Sbjct: 1   MEDEDQKELQLLPTPHS--IASSSTSHISSRPSDSSSLRFRSDPLFEA------GSGGSV 60

Query: 61  DLQLSISLRP-----------MFKYEEVKVMKPEAASCVEALKWQAAEQIRLAAMEKAYA 120
           DLQLSISLRP           +FKYEE  VMKPEAASCV+ALKWQAAEQIRLAAMEKAYA
Sbjct: 61  DLQLSISLRPIRPVTAGGAECLFKYEE--VMKPEAASCVDALKWQAAEQIRLAAMEKAYA 120

Query: 121 ERVRELTKREIELAQTEFARARQMWERAREELEKAERIKDRATRQMDSTCMEITCQSCRH 174
           ERVRELTKREIELAQTEFARARQMWERAREE+EKAER+K+RATRQMDSTCMEITCQSCR 
Sbjct: 121 ERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQ 175

[Close]

BLAST of Spg007572 vs. ExPASy TrEMBL
Match: A0A5A7UWD1 (Protein indeterminate-domain 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00540 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 7.3e-63
Identity = 150/183 (81.97%), Postives = 157/183 (85.79%), Query Frame = 0


Query: 1   MEDEDQKELQLLPTGHSSLASSSSHSHMSSRPSESSLRFRSDPLFEAAGAGAGAGGGSVD 60
           MEDEDQKELQLLPT H S+ASSS  SHMSSRPS+SSLRFRSDP FEA        GGSVD
Sbjct: 1   MEDEDQKELQLLPTPH-SIASSS--SHMSSRPSDSSLRFRSDP-FEA------GSGGSVD 60

Query: 61  LQLSISLRP----------MFKYEEVKVMKPEAASCVEALKWQAAEQIRLAAMEKAYAER 120
           LQLSISLRP          +FKYEE  VMKPEAASCVEALKWQAAEQIRLAA+EKAYAER
Sbjct: 61  LQLSISLRPIRPVTAGGECLFKYEE--VMKPEAASCVEALKWQAAEQIRLAAIEKAYAER 120

Query: 121 VRELTKREIELAQTEFARARQMWERAREELEKAERIKDRATRQMDSTCMEITCQSCRHRF 174
           VRELTKREIELAQTEFARARQMWERAREE+EKAER+K+RATRQMDSTCMEITCQSCR RF
Sbjct: 121 VRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRF 171

[Close]

BLAST of Spg007572 vs. ExPASy TrEMBL
Match: A0A6J1E4S8 (protein indeterminate-domain 16-like OS=Cucurbita moschata OX=3662 GN=LOC111429927 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.8e-61
Identity = 144/180 (80.00%), Postives = 153/180 (85.00%), Query Frame = 0


Query: 1   MEDEDQKELQLLPTGHSSLASSSSHSHMSSRPSESSLRFRSDPLFEAAGAGAGAGGGSVD 60
           MEDEDQKELQLLPT H ++ASSSS SHMSSRPS SS+RFRSDP          AG GS+D
Sbjct: 1   MEDEDQKELQLLPTPH-TIASSSSSSHMSSRPSASSMRFRSDPY--------EAGPGSLD 60

Query: 61  LQLSISLRP-------MFKYEEVKVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRE 120
           LQLSIS+RP       +FKYEE  VMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRE
Sbjct: 61  LQLSISVRPIRPTAECVFKYEE--VMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRE 120

Query: 121 LTKREIELAQTEFARARQMWERAREELEKAERIKDRATRQMDSTCMEITCQSCRHRFRPS 174
           LTKREIELAQTEF RARQMWERAREE+EKAER+K+RATRQMDSTCMEITCQSCR RFR S
Sbjct: 121 LTKREIELAQTEFGRARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRAS 169

[Close]

BLAST of Spg007572 vs. TAIR 10
Match: AT3G48550.1 (BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G01940.3); Has 78 Blast hits to 78 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 135.2 bits (339), Expect = 5.0e-32
Identity = 85/171 (49.71%), Postives = 112/171 (65.50%), Query Frame = 0


Query: 2   EDEDQKELQLLPTGHSSLASSSSHSHMSSRPSESSLRFRSDPLFEAAGAGAGAGGGSVDL 61
           + +  KELQLLP+  S+ +    H          +   RS  +              +DL
Sbjct: 4   QQDHHKELQLLPSPPSTESPVRKHRPTVITTDHHNNHHRSSSMIH----------HDLDL 63

Query: 62  QLSISLRPMFKYEEVKVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIEL 121
           +LSISL  +   EE+    P     VEALKWQAAEQIRLAA+EKAYAERVRELT+RE+E+
Sbjct: 64  KLSISLSSISTAEEL----PNGG--VEALKWQAAEQIRLAAIEKAYAERVRELTRREMEM 123

Query: 122 AQTEFARARQMWERAREELEKAERIKDRATRQMDSTCMEITCQSCRHRFRP 173
           AQ+EFARAR MW++AREE+E+AER+K+R+  ++D+ C+EITC SCR RFRP
Sbjct: 124 AQSEFARARVMWQKAREEVERAERLKERSMTKIDTACLEITCHSCRQRFRP 158

[Close]

BLAST of Spg007572 vs. TAIR 10
Match: AT2G01940.1 (C2H2-like zinc finger protein )

HSP 1 Score: 63.2 bits (152), Expect = 2.4e-10
Identity = 33/79 (41.77%), Postives = 61/79 (77.22%), Query Frame = 0


Query: 94  AAEQI-RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREELEKAERIKDRATR 153
           A+EQI ++A  EKAYAE  +   KR+ E+A+ EFA A+++ ++A+ ELE+A+ +K+++ +
Sbjct: 335 ASEQIMKIAMKEKAYAEEAKREAKRQREIAENEFANAKKIRQKAQAELERAKFLKEQSMK 394

Query: 154 QMDSTCMEITCQSCRHRFR 172
           ++ ST M++TCQ+C+ +F+
Sbjct: 395 KISSTIMQVTCQTCKGQFQ 413

[Close]

BLAST of Spg007572 vs. TAIR 10
Match: AT2G01940.2 (C2H2-like zinc finger protein )

HSP 1 Score: 63.2 bits (152), Expect = 2.4e-10
Identity = 33/79 (41.77%), Postives = 61/79 (77.22%), Query Frame = 0


Query: 94  AAEQI-RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREELEKAERIKDRATR 153
           A+EQI ++A  EKAYAE  +   KR+ E+A+ EFA A+++ ++A+ ELE+A+ +K+++ +
Sbjct: 246 ASEQIMKIAMKEKAYAEEAKREAKRQREIAENEFANAKKIRQKAQAELERAKFLKEQSMK 305

Query: 154 QMDSTCMEITCQSCRHRFR 172
           ++ ST M++TCQ+C+ +F+
Sbjct: 306 KISSTIMQVTCQTCKGQFQ 324

[Close]

BLAST of Spg007572 vs. TAIR 10
Match: AT2G01940.3 (C2H2-like zinc finger protein )

HSP 1 Score: 63.2 bits (152), Expect = 2.4e-10
Identity = 33/79 (41.77%), Postives = 61/79 (77.22%), Query Frame = 0


Query: 94  AAEQI-RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREELEKAERIKDRATR 153
           A+EQI ++A  EKAYAE  +   KR+ E+A+ EFA A+++ ++A+ ELE+A+ +K+++ +
Sbjct: 336 ASEQIMKIAMKEKAYAEEAKREAKRQREIAENEFANAKKIRQKAQAELERAKFLKEQSMK 395

Query: 154 QMDSTCMEITCQSCRHRFR 172
           ++ ST M++TCQ+C+ +F+
Sbjct: 396 KISSTIMQVTCQTCKGQFQ 414

[Close]

BLAST of Spg007572 vs. TAIR 10
Match: AT1G25250.1 (indeterminate(ID)-domain 16 )

HSP 1 Score: 55.1 bits (131), Expect = 6.6e-08
Identity = 28/68 (41.18%), Postives = 48/68 (70.59%), Query Frame = 0


Query: 104 EKAYAERVRELTKREIELAQTEFARARQMWERAREELEKAERIKDRATRQMDSTCMEITC 163
           E   AE  R+  KR+IE+A+ +F +A+++ E A+ ELEKA  +++ A +++++T MEITC
Sbjct: 268 EARKAEETRQEAKRQIEMAEKDFEKAKRIREEAKTELEKAHVVREEAIKRINATMMEITC 327

Query: 164 QSCRHRFR 172
            SC+  F+
Sbjct: 328 HSCKQLFQ 335

The following BLAST results are available for this feature:

BLAST of Spg007572 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008464429.1	5.2e-63	82.51	PREDICTED: protein indeterminate-domain 16 [Cucumis melo] >TYJ98452.1 protein in...	[more]
XP_004138047.1	6.8e-63	80.54	protein indeterminate-domain 16 [Cucumis sativus]	[more]
XP_038878928.1	8.8e-63	83.89	protein indeterminate-domain 16 [Benincasa hispida]	[more]
KAA0057771.1	1.5e-62	81.97	protein indeterminate-domain 16 [Cucumis melo var. makuwa]	[more]
XP_022921773.1	3.7e-61	80.00	protein indeterminate-domain 16-like [Cucurbita moschata]	[more]

BLAST of Spg007572 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4IPE3	3.4e-09	41.77	Zinc finger protein SHOOT GRAVITROPISM 5 OS=Arabidopsis thaliana OX=3702 GN=SGR5...	[more]
Q9FRH4	9.3e-07	41.18	Protein indeterminate-domain 16 OS=Arabidopsis thaliana OX=3702 GN=IDD16 PE=2 SV...	[more]
Q9C9X7	3.5e-06	33.05	Protein indeterminate-domain 14 OS=Arabidopsis thaliana OX=3702 GN=IDD14 PE=1 SV...	[more]

BLAST of Spg007572 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BFD1	2.5e-63	82.51	Protein indeterminate-domain 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3CN02	2.5e-63	82.51	protein indeterminate-domain 16 OS=Cucumis melo OX=3656 GN=LOC103502321 PE=4 SV=...	[more]
A0A0A0LRS8	3.3e-63	80.54	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G001530 PE=4 SV=1	[more]
A0A5A7UWD1	7.3e-63	81.97	Protein indeterminate-domain 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A6J1E4S8	1.8e-61	80.00	protein indeterminate-domain 16-like OS=Cucurbita moschata OX=3662 GN=LOC1114299...	[more]

BLAST of Spg007572 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G48550.1	5.0e-32	49.71	BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:...	[more]
AT2G01940.1	2.4e-10	41.77	C2H2-like zinc finger protein	[more]
AT2G01940.2	2.4e-10	41.77	C2H2-like zinc finger protein	[more]
AT2G01940.3	2.4e-10	41.77	C2H2-like zinc finger protein	[more]
AT1G25250.1	6.6e-08	41.18	indeterminate(ID)-domain 16	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 112..160
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..37
None	No IPR available	PANTHER	PTHR34946:SF2	OS03G0310200 PROTEIN	coord: 1..172
IPR039288	Zinc finger protein SHOOT GRAVITROPISM 5-like	PANTHER	PTHR34946	OS03G0310200 PROTEIN	coord: 1..172

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg007572.1	Spg007572.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009630	gravitropism
cellular_component	GO:0005634	nucleus