Spg007552 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg007552
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Rubredoxin-like domain-containing protein
Location	scaffold2: 177438 .. 179301 (+)
RNA-Seq Expression	Spg007552
Synteny	Spg007552

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAAAAAGGTATTTTACCCAAAAAAAAAAAAAAAAAAAAACGGATGGTGCCGTAACTTTCTAGAGGGTGGTGAGTGTGGGATAGGATTCGATCAAAATGATTGGGAAGATTGATTGTCCGCCACCCATAGTTTTGCTTTTGTATTCGGCATTCAACCATTCTCTCTGTTTTCTCGCTATCCGCTCTCTCCAATTCTTCTTTTCACTCCAGATTTCTCCATTTTAACTCACTCTGTTTTCTTACTAGCTCCAATGGCTTCTGTTTCAGCTACTTCTCTCAGGTTCCAGCTACCGCCCAAGCCACATTCCAAGATTAACCAGGTTTTCCCCTTAATTTACAGTTGCATTGCTCTTTTCCTACTTCCCGGTGTGCTCAACACTTGCTCCATCTGTCCATTATATGTTATTTGTGTTATCAATTATAATTGATTATAATTTATTTAAGGAAGACGGCGGCGCCGATAGGGACTCCATGTTTTGGGGCCGTAGCTCCAACCGCTTACCTTTGAAATCTTCCTTCATCTCTCCTTTACGTAAGATTCCTTCTTTAAGGACGCAAAGCTCTGCTGTTGCAGCTGCCCCCAAATTCTCCATGCGCGTCGCTTCCAAACAAGCCTATATCTGTCGTGATTGCGGGTATCACTGCCACTTCGTATCTTTCCTTCCTTTCTGTGGTTGCGCCTAATTTACATGTTAATTTTCTCGATCCTTGTAATGAAGCTCTCCTTTGGGCGAATATGTAGGTACATTTACAACGATAGAACTCCTTTTGAGAAATTGCCTGATAAGTATTTCTGTCCTGGTAATTTGCTTCCTTCTTCTTCATTTCTCAGGCTTGGATGATATTGACCTGTGTATTGTTATTTCTCTTCTTTCCAAACTTAATTTTGTATAATCTTCGAGCCTACCAGTTCAAATCAATTTCGAGAATTCCCTGGTCAATCGGATTATTTTACTGTTGACGTGGAATCGCCTTTTATTTTTAACTGAATAAGTTCCTGCTATTATCGTATACTCAAAACTTAAAAATGATATCTTCAAGAACCAAAGAAAGAGAACTTATAGAACATACAGTCCTCTTCTTGTCGGTGAAACCAACTTCAAATCATTTACATTCTGCTCCAATTCAATAAAGAAATTGAAATCTAATATAAATTATTATGCCTTGGCAGTTTGTGGTGCTCCTAAGCGACGATTTAGGCCTTATGAGCAATCTGTGACTAAAAATGCTAACGAATTTGATGTGAGGAAGGCGAGAAAGGCGCAGATCCAGAAAGATGAATCTATTGGGTAAGGCGGAAAATCAAATTACAGTCTTTATAAAAGATGCGTAGATTTTAATGAATATTTATTCAGTCTGACTGATATCACGTATAACGGTATAGGAAGGTGCTGCCTATTGCTGCAGCAGTGGGAATCGTGGCACTTGTAGGTTTATACTTGTACCTGAATAGCGTCTTTTAGATCGAGTGGCTTGCTCAATGACGGGGGCTTAACATCATTTATTTCATCATTTTCTTCCCAAGGCTGTGTTATATTGATTTAAATATTATATGTATTTTTTCCATCTACTATCCAAAATCCCTGGCAAATTGCTTAAGCTATGCAATATTATATACATATTCAATTGTTTATTGAACATATTTATTTGCACTCAGTAGAATAGCCGTTGTTGATTCACTAGTTATTTTCTTGAGTATGGAGGTAGTTTCAGCTAGTTACTAATTTTTGTGTAGGCATCTAAAGAATGGAATGTAATACCCATGGATTCCCTTTTACTCTCTGAAAATTTTGGCTGGTATAACCATGTGCCTTACCTGATTTTAGGACCTGTGGTTGTGGCTTTGGGGCAGATTGACTTTGGG

mRNA sequence

ATGGCTTCTGTTTCAGCTACTTCTCTCAGGTTCCAGCTACCGCCCAAGCCACATTCCAAGATTAACCAGGAAGACGGCGGCGCCGATAGGGACTCCATGTTTTGGGGCCGTAGCTCCAACCGCTTACCTTTGAAATCTTCCTTCATCTCTCCTTTACGTAAGATTCCTTCTTTAAGGACGCAAAGCTCTGCTGTTGCAGCTGCCCCCAAATTCTCCATGCGCGTCGCTTCCAAACAAGCCTATATCTGTCGTGATTGCGGGTACATTTACAACGATAGAACTCCTTTTGAGAAATTGCCTGATAAGTATTTCTGTCCTGTTTGTGGTGCTCCTAAGCGACGATTTAGGCCTTATGAGCAATCTGTGACTAAAAATGCTAACGAATTTGATGTGAGGAAGGCGAGAAAGGCGCAGATCCAGAAAGATGAATCTATTGGGAAGGTGCTGCCTATTGCTGCAGCAGTGGGAATCGTGGCACTTGTAGGTTTATACTTGTACCTGAATAGCGTCTTTTAG

Coding sequence (CDS)

ATGGCTTCTGTTTCAGCTACTTCTCTCAGGTTCCAGCTACCGCCCAAGCCACATTCCAAGATTAACCAGGAAGACGGCGGCGCCGATAGGGACTCCATGTTTTGGGGCCGTAGCTCCAACCGCTTACCTTTGAAATCTTCCTTCATCTCTCCTTTACGTAAGATTCCTTCTTTAAGGACGCAAAGCTCTGCTGTTGCAGCTGCCCCCAAATTCTCCATGCGCGTCGCTTCCAAACAAGCCTATATCTGTCGTGATTGCGGGTACATTTACAACGATAGAACTCCTTTTGAGAAATTGCCTGATAAGTATTTCTGTCCTGTTTGTGGTGCTCCTAAGCGACGATTTAGGCCTTATGAGCAATCTGTGACTAAAAATGCTAACGAATTTGATGTGAGGAAGGCGAGAAAGGCGCAGATCCAGAAAGATGAATCTATTGGGAAGGTGCTGCCTATTGCTGCAGCAGTGGGAATCGTGGCACTTGTAGGTTTATACTTGTACCTGAATAGCGTCTTTTAG

Protein sequence

MASVSATSLRFQLPPKPHSKINQEDGGADRDSMFWGRSSNRLPLKSSFISPLRKIPSLRTQSSAVAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPDKYFCPVCGAPKRRFRPYEQSVTKNANEFDVRKARKAQIQKDESIGKVLPIAAAVGIVALVGLYLYLNSVF

Homology

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BLAST of Spg007552 vs. NCBI nr
Match: XP_023516579.1 (uncharacterized protein LOC111780418 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 301.2 bits (770), Expect = 5.6e-78
Identity = 151/171 (88.30%), Postives = 156/171 (91.23%), Query Frame = 0


Query: 1   MASVSATSLRFQLPPKPHSKINQEDGGADRDSMFWGRSSNRLPLKSSFISPLRKIPSLRT 60
           MAS SA+SL F LPP PHSKINQEDGGADR SM WG +SNR  LKSSFISPLR+IPS R 
Sbjct: 1   MASFSASSLSFHLPPNPHSKINQEDGGADRGSMLWGSASNRSSLKSSFISPLRQIPSTRK 60

Query: 61  QSSAVAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPDKYFCPVCGAPKRRFRPYEQ 120
           Q  AVAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPD YFCPVCGAPKRRFRPYEQ
Sbjct: 61  QKCAVAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPDNYFCPVCGAPKRRFRPYEQ 120

Query: 121 SVTKNANEFDVRKARKAQIQKDESIGKVLPIAAAVGIVALVGLYLYLNSVF 172
           SVTKN NEFDVRKARKAQIQKDE+IGKVLPIAAAVGI+ALVGLYLYLNSVF
Sbjct: 121 SVTKNDNEFDVRKARKAQIQKDEAIGKVLPIAAAVGILALVGLYLYLNSVF 171

[Close]

BLAST of Spg007552 vs. NCBI nr
Match: XP_022921625.1 (uncharacterized protein LOC111429830 isoform X1 [Cucurbita moschata])

HSP 1 Score: 300.4 bits (768), Expect = 9.6e-78
Identity = 153/172 (88.95%), Postives = 157/172 (91.28%), Query Frame = 0


Query: 1   MASVSATSLRFQLPPKPHSKINQEDGGADRDSMFWGRSSNRLPLKSSFISPLRKIPSLRT 60
           MAS SA+SL F LPP PHSKINQEDGGADRDSM WG +SNR  LKSSFISPLR+IPS R 
Sbjct: 44  MASFSASSLSFHLPPNPHSKINQEDGGADRDSMLWGSASNRSSLKSSFISPLRQIPSTRK 103

Query: 61  QSSAVAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPDKYFCPVCGAPKRRFRPYEQ 120
           Q  AVAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPD YFCPVCGAPKRRFRPYEQ
Sbjct: 104 QKCAVAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPDNYFCPVCGAPKRRFRPYEQ 163

Query: 121 SVTKNANEFDVRKARKAQIQKDESIGKVLPI-AAAVGIVALVGLYLYLNSVF 172
           SVTKN NEFDVRKARKAQIQKDE+IGKVLPI AAAVGIVALVGLYLYLNSVF
Sbjct: 164 SVTKNDNEFDVRKARKAQIQKDEAIGKVLPIAAAAVGIVALVGLYLYLNSVF 215

[Close]

BLAST of Spg007552 vs. NCBI nr
Match: XP_022987160.1 (uncharacterized protein LOC111484793 isoform X1 [Cucurbita maxima])

HSP 1 Score: 299.7 bits (766), Expect = 1.6e-77
Identity = 150/171 (87.72%), Postives = 155/171 (90.64%), Query Frame = 0


Query: 1   MASVSATSLRFQLPPKPHSKINQEDGGADRDSMFWGRSSNRLPLKSSFISPLRKIPSLRT 60
           MAS SA+SL F LPP PHSKINQEDGGADRDSM WG +SNR  LKSSFISPL +IPS R 
Sbjct: 1   MASFSASSLSFHLPPNPHSKINQEDGGADRDSMLWGSASNRSSLKSSFISPLPQIPSTRK 60

Query: 61  QSSAVAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPDKYFCPVCGAPKRRFRPYEQ 120
           Q  AVAAAPKFS+RVASKQAYICRDCGYIYNDRTPFEKLPD YFCPVCGAPKRRFRPYEQ
Sbjct: 61  QKCAVAAAPKFSLRVASKQAYICRDCGYIYNDRTPFEKLPDNYFCPVCGAPKRRFRPYEQ 120

Query: 121 SVTKNANEFDVRKARKAQIQKDESIGKVLPIAAAVGIVALVGLYLYLNSVF 172
           SVTKN NEFD RKARKAQIQKDE+IGKVLPIAAAVGIVALVGLYLYLNSVF
Sbjct: 121 SVTKNDNEFDARKARKAQIQKDEAIGKVLPIAAAVGIVALVGLYLYLNSVF 171

[Close]

BLAST of Spg007552 vs. NCBI nr
Match: KAG6589344.1 (hypothetical protein SDJN03_14767, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 298.5 bits (763), Expect = 3.7e-77
Identity = 149/167 (89.22%), Postives = 153/167 (91.62%), Query Frame = 0


Query: 5   SATSLRFQLPPKPHSKINQEDGGADRDSMFWGRSSNRLPLKSSFISPLRKIPSLRTQSSA 64
           SA+SL   LPP PHSKINQEDGGADRDSM WG +SNR  LKSSFISPLR+IPS R Q  A
Sbjct: 195 SASSLSLHLPPNPHSKINQEDGGADRDSMLWGSASNRSSLKSSFISPLRQIPSTRKQKCA 254

Query: 65  VAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPDKYFCPVCGAPKRRFRPYEQSVTK 124
           VAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPD YFCPVCGAPKRRFRPYEQSVTK
Sbjct: 255 VAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPDNYFCPVCGAPKRRFRPYEQSVTK 314

Query: 125 NANEFDVRKARKAQIQKDESIGKVLPIAAAVGIVALVGLYLYLNSVF 172
           N NEFDVRKARKAQIQKDE+IGKVLPIAAAVGIVALVGLYLYLNSVF
Sbjct: 315 NDNEFDVRKARKAQIQKDEAIGKVLPIAAAVGIVALVGLYLYLNSVF 361

[Close]

BLAST of Spg007552 vs. NCBI nr
Match: XP_023516580.1 (uncharacterized protein LOC111780418 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 295.8 bits (756), Expect = 2.4e-76
Identity = 147/168 (87.50%), Postives = 153/168 (91.07%), Query Frame = 0


Query: 4   VSATSLRFQLPPKPHSKINQEDGGADRDSMFWGRSSNRLPLKSSFISPLRKIPSLRTQSS 63
           + A+SL F LPP PHSKINQEDGGADR SM WG +SNR  LKSSFISPLR+IPS R Q  
Sbjct: 1   MQASSLSFHLPPNPHSKINQEDGGADRGSMLWGSASNRSSLKSSFISPLRQIPSTRKQKC 60

Query: 64  AVAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPDKYFCPVCGAPKRRFRPYEQSVT 123
           AVAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPD YFCPVCGAPKRRFRPYEQSVT
Sbjct: 61  AVAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPDNYFCPVCGAPKRRFRPYEQSVT 120

Query: 124 KNANEFDVRKARKAQIQKDESIGKVLPIAAAVGIVALVGLYLYLNSVF 172
           KN NEFDVRKARKAQIQKDE+IGKVLPIAAAVGI+ALVGLYLYLNSVF
Sbjct: 121 KNDNEFDVRKARKAQIQKDEAIGKVLPIAAAVGILALVGLYLYLNSVF 168

[Close]

BLAST of Spg007552 vs. ExPASy Swiss-Prot
Match: P04170 (Rubredoxin-1 OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949 / MB) OX=525146 GN=rd1 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.0e-05
Identity = 21/43 (48.84%), Postives = 27/43 (62.79%), Query Frame = 0


Query: 79  QAYICRDCGYIY----NDRTPFEKLPDKYFCPVCGAPKRRFRP 118
           Q Y+C  CGY Y    +D  PF++LPD + CPVCG  K +F P
Sbjct: 2   QKYVCNVCGYEYDPAEHDNVPFDQLPDDWCCPVCGVSKDQFSP 44

[Close]

BLAST of Spg007552 vs. ExPASy Swiss-Prot
Match: O26258 (Probable rubredoxin OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) OX=187420 GN=MTH_155 PE=3 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.7e-05
Identity = 23/56 (41.07%), Postives = 32/56 (57.14%), Query Frame = 0


Query: 75  VASKQAYICRDCGYIYNDR-----------TPFEKLPDKYFCPVCGAPKRRFRPYE 120
           V++ + Y CR CGYIY+             TPFE LP+ + CP CGA K+ F+P +
Sbjct: 8   VSAMKRYKCRVCGYIYDPEKGEPRTDTPPGTPFEDLPETWRCPSCGAKKKMFKPLD 63

[Close]

BLAST of Spg007552 vs. ExPASy Swiss-Prot
Match: P24297 (Rubredoxin OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) OX=186497 GN=rub PE=1 SV=2)

HSP 1 Score: 50.4 bits (119), Expect = 2.3e-05
Identity = 21/50 (42.00%), Postives = 29/50 (58.00%), Query Frame = 0


Query: 81  YICRDCGYIYND-----------RTPFEKLPDKYFCPVCGAPKRRFRPYE 120
           ++C+ CGYIY++            T FE+LPD + CP+CGAPK  F   E
Sbjct: 4   WVCKICGYIYDEDAGDPDNGISPGTKFEELPDDWVCPICGAPKSEFEKLE 53

[Close]

BLAST of Spg007552 vs. ExPASy Swiss-Prot
Match: Q9AL94 (Rubredoxin OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) OX=272562 GN=rd PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 2.5e-04
Identity = 21/51 (41.18%), Postives = 27/51 (52.94%), Query Frame = 0


Query: 81  YICRDCGYIY-----------NDRTPFEKLPDKYFCPVCGAPKRRFRPYEQ 121
           Y+C  CGYIY           N  T FE +PD + CP+CG  K +F P E+
Sbjct: 4   YVCVVCGYIYDPAEGDPDNGVNPGTSFEDIPDDWVCPLCGVGKDQFEPSEE 54

[Close]

BLAST of Spg007552 vs. ExPASy Swiss-Prot
Match: P58992 (Rubredoxin-1 OS=Chlorobaculum tepidum (strain ATCC 49652 / DSM 12025 / NBRC 103806 / TLS) OX=194439 GN=rub1 PE=3 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 4.3e-04
Identity = 19/50 (38.00%), Postives = 28/50 (56.00%), Query Frame = 0


Query: 80  AYICRDCGYIYNDR-----------TPFEKLPDKYFCPVCGAPKRRFRPY 119
           +++C +CGYIY+              PF+KLPD + CPVC  PK +F  +
Sbjct: 16  SWMCAECGYIYDPAEGNLETNIRPGMPFDKLPDDWSCPVCNHPKNQFTKF 65

[Close]

BLAST of Spg007552 vs. ExPASy TrEMBL
Match: A0A6J1E6B5 (uncharacterized protein LOC111429830 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111429830 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 4.7e-78
Identity = 153/172 (88.95%), Postives = 157/172 (91.28%), Query Frame = 0


Query: 1   MASVSATSLRFQLPPKPHSKINQEDGGADRDSMFWGRSSNRLPLKSSFISPLRKIPSLRT 60
           MAS SA+SL F LPP PHSKINQEDGGADRDSM WG +SNR  LKSSFISPLR+IPS R 
Sbjct: 44  MASFSASSLSFHLPPNPHSKINQEDGGADRDSMLWGSASNRSSLKSSFISPLRQIPSTRK 103

Query: 61  QSSAVAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPDKYFCPVCGAPKRRFRPYEQ 120
           Q  AVAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPD YFCPVCGAPKRRFRPYEQ
Sbjct: 104 QKCAVAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPDNYFCPVCGAPKRRFRPYEQ 163

Query: 121 SVTKNANEFDVRKARKAQIQKDESIGKVLPI-AAAVGIVALVGLYLYLNSVF 172
           SVTKN NEFDVRKARKAQIQKDE+IGKVLPI AAAVGIVALVGLYLYLNSVF
Sbjct: 164 SVTKNDNEFDVRKARKAQIQKDEAIGKVLPIAAAAVGIVALVGLYLYLNSVF 215

[Close]

BLAST of Spg007552 vs. ExPASy TrEMBL
Match: A0A6J1JG21 (uncharacterized protein LOC111484793 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484793 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 7.9e-78
Identity = 150/171 (87.72%), Postives = 155/171 (90.64%), Query Frame = 0


Query: 1   MASVSATSLRFQLPPKPHSKINQEDGGADRDSMFWGRSSNRLPLKSSFISPLRKIPSLRT 60
           MAS SA+SL F LPP PHSKINQEDGGADRDSM WG +SNR  LKSSFISPL +IPS R 
Sbjct: 1   MASFSASSLSFHLPPNPHSKINQEDGGADRDSMLWGSASNRSSLKSSFISPLPQIPSTRK 60

Query: 61  QSSAVAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPDKYFCPVCGAPKRRFRPYEQ 120
           Q  AVAAAPKFS+RVASKQAYICRDCGYIYNDRTPFEKLPD YFCPVCGAPKRRFRPYEQ
Sbjct: 61  QKCAVAAAPKFSLRVASKQAYICRDCGYIYNDRTPFEKLPDNYFCPVCGAPKRRFRPYEQ 120

Query: 121 SVTKNANEFDVRKARKAQIQKDESIGKVLPIAAAVGIVALVGLYLYLNSVF 172
           SVTKN NEFD RKARKAQIQKDE+IGKVLPIAAAVGIVALVGLYLYLNSVF
Sbjct: 121 SVTKNDNEFDARKARKAQIQKDEAIGKVLPIAAAVGIVALVGLYLYLNSVF 171

[Close]

BLAST of Spg007552 vs. ExPASy TrEMBL
Match: A0A6J1E1X1 (uncharacterized protein LOC111429830 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111429830 PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 2.0e-76
Identity = 149/169 (88.17%), Postives = 154/169 (91.12%), Query Frame = 0


Query: 4   VSATSLRFQLPPKPHSKINQEDGGADRDSMFWGRSSNRLPLKSSFISPLRKIPSLRTQSS 63
           + A+SL F LPP PHSKINQEDGGADRDSM WG +SNR  LKSSFISPLR+IPS R Q  
Sbjct: 46  MQASSLSFHLPPNPHSKINQEDGGADRDSMLWGSASNRSSLKSSFISPLRQIPSTRKQKC 105

Query: 64  AVAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPDKYFCPVCGAPKRRFRPYEQSVT 123
           AVAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPD YFCPVCGAPKRRFRPYEQSVT
Sbjct: 106 AVAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPDNYFCPVCGAPKRRFRPYEQSVT 165

Query: 124 KNANEFDVRKARKAQIQKDESIGKVLPI-AAAVGIVALVGLYLYLNSVF 172
           KN NEFDVRKARKAQIQKDE+IGKVLPI AAAVGIVALVGLYLYLNSVF
Sbjct: 166 KNDNEFDVRKARKAQIQKDEAIGKVLPIAAAAVGIVALVGLYLYLNSVF 214

[Close]

BLAST of Spg007552 vs. ExPASy TrEMBL
Match: A0A5A7UPF0 (Rubredoxin family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00170 PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 3.3e-76
Identity = 149/172 (86.63%), Postives = 159/172 (92.44%), Query Frame = 0


Query: 1   MASVSATSLRFQLPPKPHSKINQEDGGADRDSMFWGRSSNRLPLKSSFISPLRKIPSLRT 60
           MASVSA+SL F LPPKPH K+NQEDGG DR+SMF   +SNRL LKSSFISPLRKIPSLR 
Sbjct: 1   MASVSASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRR 60

Query: 61  QSSAVAAA-PKFSMRVASKQAYICRDCGYIYNDRTPFEKLPDKYFCPVCGAPKRRFRPYE 120
           Q+S VAAA PKFSMRVASKQAYICRDCGYIYNDRTPF+KLPDKYFCPVCGAPKRRFRPYE
Sbjct: 61  QNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRPYE 120

Query: 121 QSVTKNANEFDVRKARKAQIQKDESIGKVLPIAAAVGIVALVGLYLYLNSVF 172
           Q+V KN NEFD+RKARKAQIQKDE+IGKVLPIAAA+GIVALVGLYLYLNSVF
Sbjct: 121 QTVNKNDNEFDLRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSVF 172

[Close]

BLAST of Spg007552 vs. ExPASy TrEMBL
Match: A0A6J1JDC8 (uncharacterized protein LOC111484793 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484793 PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 3.3e-76
Identity = 146/168 (86.90%), Postives = 152/168 (90.48%), Query Frame = 0


Query: 4   VSATSLRFQLPPKPHSKINQEDGGADRDSMFWGRSSNRLPLKSSFISPLRKIPSLRTQSS 63
           + A+SL F LPP PHSKINQEDGGADRDSM WG +SNR  LKSSFISPL +IPS R Q  
Sbjct: 1   MQASSLSFHLPPNPHSKINQEDGGADRDSMLWGSASNRSSLKSSFISPLPQIPSTRKQKC 60

Query: 64  AVAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPDKYFCPVCGAPKRRFRPYEQSVT 123
           AVAAAPKFS+RVASKQAYICRDCGYIYNDRTPFEKLPD YFCPVCGAPKRRFRPYEQSVT
Sbjct: 61  AVAAAPKFSLRVASKQAYICRDCGYIYNDRTPFEKLPDNYFCPVCGAPKRRFRPYEQSVT 120

Query: 124 KNANEFDVRKARKAQIQKDESIGKVLPIAAAVGIVALVGLYLYLNSVF 172
           KN NEFD RKARKAQIQKDE+IGKVLPIAAAVGIVALVGLYLYLNSVF
Sbjct: 121 KNDNEFDARKARKAQIQKDEAIGKVLPIAAAVGIVALVGLYLYLNSVF 168

[Close]

BLAST of Spg007552 vs. TAIR 10
Match: AT5G51010.1 (Rubredoxin-like superfamily protein )

HSP 1 Score: 169.5 bits (428), Expect = 2.4e-42
Identity = 86/144 (59.72%), Postives = 108/144 (75.00%), Query Frame = 0


Query: 32  SMFWGRSSNRLP-----LKSSFISPLRKIPSLRTQSS-AVAAAPKFSMRVASKQAYICRD 91
           +++ GRSS  LP     L+ S   P   +  L  + S + ++AP+FSMRV+SKQAYICRD
Sbjct: 9   TLYAGRSSVVLPPTTPTLQRSSFLPYYSMRLLGNKKSLSKSSAPRFSMRVSSKQAYICRD 68

Query: 92  CGYIYNDRTPFEKLPDKYFCPVCGAPKRRFRPYEQSVTKNANEFDVRKARKAQIQKDESI 151
           CGYIYNDRTPF+KLPD YFCPVC APKRRFR Y   V+KN N+ DVRKARKA++Q+DE++
Sbjct: 69  CGYIYNDRTPFDKLPDNYFCPVCAAPKRRFRAYMPDVSKNVNDKDVRKARKAELQRDEAV 128

Query: 152 GKVLPIAAAVGIVALVGLYLYLNS 170
           GK LPI  AVG++AL  LY Y+NS
Sbjct: 129 GKALPIGIAVGVLALAALYFYVNS 152

[Close]

BLAST of Spg007552 vs. TAIR 10
Match: AT5G17170.1 (rubredoxin family protein )

HSP 1 Score: 55.5 bits (132), Expect = 5.0e-08
Identity = 25/62 (40.32%), Postives = 35/62 (56.45%), Query Frame = 0


Query: 67  AAPKFSMRVASKQ----AYICRDCGYIYNDRTPFEKLPDKYFCPVCGAPKRRFRPYEQSV 125
           A P+F  ++   Q     +IC DCG+IY     F++ PD Y CP C APK+RF  Y+ + 
Sbjct: 179 APPRFGRKLTETQKARATHICLDCGFIYTLPKSFDEQPDTYVCPQCIAPKKRFAKYDVNT 238

The following BLAST results are available for this feature:

BLAST of Spg007552 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023516579.1	5.6e-78	88.30	uncharacterized protein LOC111780418 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022921625.1	9.6e-78	88.95	uncharacterized protein LOC111429830 isoform X1 [Cucurbita moschata]	[more]
XP_022987160.1	1.6e-77	87.72	uncharacterized protein LOC111484793 isoform X1 [Cucurbita maxima]	[more]
KAG6589344.1	3.7e-77	89.22	hypothetical protein SDJN03_14767, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023516580.1	2.4e-76	87.50	uncharacterized protein LOC111780418 isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Spg007552 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P04170	1.0e-05	48.84	Rubredoxin-1 OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949 / MB) ...	[more]
O26258	1.7e-05	41.07	Probable rubredoxin OS=Methanothermobacter thermautotrophicus (strain ATCC 29096...	[more]
P24297	2.3e-05	42.00	Rubredoxin OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1...	[more]
Q9AL94	2.5e-04	41.18	Rubredoxin OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 /...	[more]
P58992	4.3e-04	38.00	Rubredoxin-1 OS=Chlorobaculum tepidum (strain ATCC 49652 / DSM 12025 / NBRC 1038...	[more]

BLAST of Spg007552 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E6B5	4.7e-78	88.95	uncharacterized protein LOC111429830 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JG21	7.9e-78	87.72	uncharacterized protein LOC111484793 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1E1X1	2.0e-76	88.17	uncharacterized protein LOC111429830 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A5A7UPF0	3.3e-76	86.63	Rubredoxin family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A6J1JDC8	3.3e-76	86.90	uncharacterized protein LOC111484793 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Spg007552 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G51010.1	2.4e-42	59.72	Rubredoxin-like superfamily protein	[more]
AT5G17170.1	5.0e-08	40.32	rubredoxin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024935	Rubredoxin domain	PFAM	PF00301	Rubredoxin	coord: 81..115 e-value: 2.6E-5 score: 24.2
IPR024935	Rubredoxin domain	CDD	cd00730	rubredoxin	coord: 81..118 e-value: 4.56161E-13 score: 58.4714
None	No IPR available	GENE3D	2.20.28.10		coord: 78..118 e-value: 1.1E-13 score: 52.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	PANTHER	PTHR48136	RUBREDOXIN-LIKE SUPERFAMILY PROTEIN	coord: 37..170
None	No IPR available	SUPERFAMILY	57802	Rubredoxin-like	coord: 78..124
IPR024934	Rubredoxin-like domain	PROSITE	PS50903	RUBREDOXIN_LIKE	coord: 78..118 score: 12.122172

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg007552.1	Spg007552.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005506	iron ion binding