Spg007550 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg007550
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	MYND-type domain-containing protein
Location	scaffold2: 429599 .. 431232 (+)
RNA-Seq Expression	Spg007550
Synteny	Spg007550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAAAAAAAAAAAAAAAGAATTAAAAGAGGAAGCAGAACGGTTACATTTCTCATACCAGAGAGATACAACACAACACACCGCCGCTTCTGAACTTCAAACCTCCTCTTTTCTCTCTACGCATGCAACCAACACGATTCCAATTTGCAAGATGATTTCTGCCAAGAGGCCAAGATCATGCAGTAAATCCGCCGGAAAATCTGATCTCTTCGATGTCTTGCCGGACGATCTCGTCATTCACCTTCTCTGCCGCCTCGCCTCCTCCGCCTCCTCCCCTTCCCACCTTCTCAGCCTTCTCTTCACGTAATTTGATTATCATGCTTCTTTTTCCTTTTCCTCTGTTTTCTTTTTGGTTTGCGATTTTGTTCGTTTCTAAATTTCTTGTCGTTTATGGAGATGATTTTGCAGATGCAAGAGGTTGAATCGCTTGGTTCTTCATCCTTTGGTGTTGTCTAAAGCTGGACCGAAGGCGTTGGCGTTTAAGACGGACAACTGGTGTGATTCCGCTCACCGATTTCTCAAACGCTGCGTTGACGCCGGTAATTCGGAAGCAAGTTACATGCTCGGAATGGTTAGTTCTTTTGTTCCTTTCTTGAAAAAGATGAAGAAATTGTTACGGTTTATGGACTGGGGGATGATGTCTGTGTTTTTTCCCCTGTAGATCCGATTTTATTGCTTGAGAAATCGAGGAAGTGGAGCTTCTTTAATGGCGAAAGCGGCGATTAAATCGCACGCTCCGGCGCTCTACTCGCTCGCCGTGATTCAATTCAACGGCAGCGGTGGCTCTAAGAGCGATAAGGATCTCCAGGCGGGCGTAGCCCTATGTGCTCGAGCCGCTTTTCTCGGCCATGTGGACGCACTTCGCGAACTCGGCCATTGCCTTCAAGACGGTTACGGCGTGCGACAGAACGCCAACGAAGGCCGCCGGCTCCTCATCCAAGCCAACGCCCGGGAGCTTGCTTCCGTTCTACTCTCCTCCTCGCGGATATGGCGACCGCGCCACCACCAGTTCGGCGACGTCGTCGATTTGACGGCGTCGAGTTGTTCGTTGCTGAGCGATTTCGGCTGTAACGTTCCGGCGGCGGAGGCGCATCCAGTGAACCGGTTTTTGAGAGAGTGGTTTGAGTCGGAGAGTGGAGTGGAGGCGCGTGTGGGGCTGAGACTATGCTCGCACGGCGGATGCGGTCGGGCGGAGACTCGGGCGCACGAGTTCCGACGGTGCTCAGTTTGCGGGACTGTAAATTACTGTTCAAGAGGATGCCAAGCGCAGGACTGGAAAGTCCGGCATAAAGAGGAGTGTAGAGCCCTTGAGCGGTGGCGGGATGCGGATGGTAACATTGCCGGCGGCATGTTTGATATTGTAGAAGAGCCTGAGGACCCCGACATCGTGGGTATTGTATAATCATAATACCGCTGTAATTTTAGTTACTTATGGATATAACTGTAATTTTATATACAATTCTTTTTCTTTTTCTTTTTTCCTTTTCTGTTTTTTGGGGTTTTAAATCATTTTTAAAGAAAAATGGGTCATATGGTACCGGGAGATTTAATCGGTAGCAGTGATAACCGACAAAGTTTTTAAACTTTAAACTTGGAAGGAAATTTTCCTTGTTAAATTAAATTATGCATGTTTTC

mRNA sequence

GAAAAAAAAAAAAAAAAAGAATTAAAAGAGGAAGCAGAACGGTTACATTTCTCATACCAGAGAGATACAACACAACACACCGCCGCTTCTGAACTTCAAACCTCCTCTTTTCTCTCTACGCATGCAACCAACACGATTCCAATTTGCAAGATGATTTCTGCCAAGAGGCCAAGATCATGCAGTAAATCCGCCGGAAAATCTGATCTCTTCGATGTCTTGCCGGACGATCTCGTCATTCACCTTCTCTGCCGCCTCGCCTCCTCCGCCTCCTCCCCTTCCCACCTTCTCAGCCTTCTCTTCACATGCAAGAGGTTGAATCGCTTGGTTCTTCATCCTTTGGTGTTGTCTAAAGCTGGACCGAAGGCGTTGGCGTTTAAGACGGACAACTGGTGTGATTCCGCTCACCGATTTCTCAAACGCTGCGTTGACGCCGGTAATTCGGAAGCAAGTTACATGCTCGGAATGATCCGATTTTATTGCTTGAGAAATCGAGGAAGTGGAGCTTCTTTAATGGCGAAAGCGGCGATTAAATCGCACGCTCCGGCGCTCTACTCGCTCGCCGTGATTCAATTCAACGGCAGCGGTGGCTCTAAGAGCGATAAGGATCTCCAGGCGGGCGTAGCCCTATGTGCTCGAGCCGCTTTTCTCGGCCATGTGGACGCACTTCGCGAACTCGGCCATTGCCTTCAAGACGGTTACGGCGTGCGACAGAACGCCAACGAAGGCCGCCGGCTCCTCATCCAAGCCAACGCCCGGGAGCTTGCTTCCGTTCTACTCTCCTCCTCGCGGATATGGCGACCGCGCCACCACCAGTTCGGCGACGTCGTCGATTTGACGGCGTCGAGTTGTTCGTTGCTGAGCGATTTCGGCTGTAACGTTCCGGCGGCGGAGGCGCATCCAGTGAACCGGTTTTTGAGAGAGTGGTTTGAGTCGGAGAGTGGAGTGGAGGCGCGTGTGGGGCTGAGACTATGCTCGCACGGCGGATGCGGTCGGGCGGAGACTCGGGCGCACGAGTTCCGACGGTGCTCAGTTTGCGGGACTGTAAATTACTGTTCAAGAGGATGCCAAGCGCAGGACTGGAAAGTCCGGCATAAAGAGGAGTGTAGAGCCCTTGAGCGGTGGCGGGATGCGGATGGTAACATTGCCGGCGGCATGTTTGATATTGTAGAAGAGCCTGAGGACCCCGACATCGTGGGTATTGTATAA

Coding sequence (CDS)

GAAAAAAAAAAAAAAAAAGAATTAAAAGAGGAAGCAGAACGGTTACATTTCTCATACCAGAGAGATACAACACAACACACCGCCGCTTCTGAACTTCAAACCTCCTCTTTTCTCTCTACGCATGCAACCAACACGATTCCAATTTGCAAGATGATTTCTGCCAAGAGGCCAAGATCATGCAGTAAATCCGCCGGAAAATCTGATCTCTTCGATGTCTTGCCGGACGATCTCGTCATTCACCTTCTCTGCCGCCTCGCCTCCTCCGCCTCCTCCCCTTCCCACCTTCTCAGCCTTCTCTTCACATGCAAGAGGTTGAATCGCTTGGTTCTTCATCCTTTGGTGTTGTCTAAAGCTGGACCGAAGGCGTTGGCGTTTAAGACGGACAACTGGTGTGATTCCGCTCACCGATTTCTCAAACGCTGCGTTGACGCCGGTAATTCGGAAGCAAGTTACATGCTCGGAATGATCCGATTTTATTGCTTGAGAAATCGAGGAAGTGGAGCTTCTTTAATGGCGAAAGCGGCGATTAAATCGCACGCTCCGGCGCTCTACTCGCTCGCCGTGATTCAATTCAACGGCAGCGGTGGCTCTAAGAGCGATAAGGATCTCCAGGCGGGCGTAGCCCTATGTGCTCGAGCCGCTTTTCTCGGCCATGTGGACGCACTTCGCGAACTCGGCCATTGCCTTCAAGACGGTTACGGCGTGCGACAGAACGCCAACGAAGGCCGCCGGCTCCTCATCCAAGCCAACGCCCGGGAGCTTGCTTCCGTTCTACTCTCCTCCTCGCGGATATGGCGACCGCGCCACCACCAGTTCGGCGACGTCGTCGATTTGACGGCGTCGAGTTGTTCGTTGCTGAGCGATTTCGGCTGTAACGTTCCGGCGGCGGAGGCGCATCCAGTGAACCGGTTTTTGAGAGAGTGGTTTGAGTCGGAGAGTGGAGTGGAGGCGCGTGTGGGGCTGAGACTATGCTCGCACGGCGGATGCGGTCGGGCGGAGACTCGGGCGCACGAGTTCCGACGGTGCTCAGTTTGCGGGACTGTAAATTACTGTTCAAGAGGATGCCAAGCGCAGGACTGGAAAGTCCGGCATAAAGAGGAGTGTAGAGCCCTTGAGCGGTGGCGGGATGCGGATGGTAACATTGCCGGCGGCATGTTTGATATTGTAGAAGAGCCTGAGGACCCCGACATCGTGGGTATTGTATAA

Protein sequence

EKKKKKELKEEAERLHFSYQRDTTQHTAASELQTSSFLSTHATNTIPICKMISAKRPRSCSKSAGKSDLFDVLPDDLVIHLLCRLASSASSPSHLLSLLFTCKRLNRLVLHPLVLSKAGPKALAFKTDNWCDSAHRFLKRCVDAGNSEASYMLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNANEGRRLLIQANARELASVLLSSSRIWRPRHHQFGDVVDLTASSCSLLSDFGCNVPAAEAHPVNRFLREWFESESGVEARVGLRLCSHGGCGRAETRAHEFRRCSVCGTVNYCSRGCQAQDWKVRHKEECRALERWRDADGNIAGGMFDIVEEPEDPDIVGIV

Homology

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BLAST of Spg007550 vs. NCBI nr
Match: KAG6589385.1 (F-box protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 611.3 bits (1575), Expect = 6.0e-171
Identity = 298/362 (82.32%), Postives = 324/362 (89.50%), Query Frame = 0


Query: 41  HATNTIPICKMISAKRPRSCSKSAGKSDLFDVLPDDLVIHLLCRLASSASSPSHLLSLLF 100
           +A N    C MISAKRPR+C   A +SDLFDVLPDDL+IHLLCRLASSASSPS LL+LL 
Sbjct: 63  NACNRTQHCNMISAKRPRTCRNFAAESDLFDVLPDDLLIHLLCRLASSASSPSDLLNLLL 122

Query: 101 TCKRLNRLVLHPLVLSKAGPKALAFKTDNWCDSAHRFLKRCVDAGNSEASYMLGMIRFYC 160
           TCKRLNRLVLHPLVLSKAGPKA A + + WCDSAHRFLKRCVDAGNSEASY LGMIRFYC
Sbjct: 123 TCKRLNRLVLHPLVLSKAGPKAFAVRMEKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYC 182

Query: 161 LRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVD 220
           LRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSK+DKDLQAGVALCARAAFLGHVD
Sbjct: 183 LRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKNDKDLQAGVALCARAAFLGHVD 242

Query: 221 ALRELGHCLQDGYGVRQNANEGRRLLIQANARELASVLLSSSRIWRPRHHQFGDVVDLTA 280
           ALRELGHCLQDGYGVR+N++EGRRLLIQANARELA+VLLSSSR+ + RHHQFG++ DLTA
Sbjct: 243 ALRELGHCLQDGYGVRRNSDEGRRLLIQANARELAAVLLSSSRVRQQRHHQFGNLPDLTA 302

Query: 281 SSCSLLSDFGCNVPAAEAHPVNRFLREWFESESGVEARVGLRLCSHGGCGRAETRAHEFR 340
           + CSLLSDFGC+ PA E HPVN FLREWFESE GV ARVGLRLCSHGGCGR ETR HEFR
Sbjct: 303 TRCSLLSDFGCDFPATEPHPVNLFLREWFESERGVAARVGLRLCSHGGCGRPETRPHEFR 362

Query: 341 RCSVCGTVNYCSRGCQAQDWKVRHKEECRALERWRDAD-GNIAGGMFDIVEEPEDPDIVG 400
           RCS+CGTVNYCSRGCQAQDWKVRHKEEC A++RW+DA+  N  GGMF+ VEE ED ++VG
Sbjct: 363 RCSICGTVNYCSRGCQAQDWKVRHKEECTAVQRWQDAEVDNAGGGMFNAVEEVEDANVVG 422

Query: 401 IV 402
            V
Sbjct: 423 TV 424

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BLAST of Spg007550 vs. NCBI nr
Match: KAG7023063.1 (F-box protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 606.7 bits (1563), Expect = 1.5e-169
Identity = 295/352 (83.81%), Postives = 320/352 (90.91%), Query Frame = 0


Query: 51  MISAKRPRSCSKSAGKSDLFDVLPDDLVIHLLCRLASSASSPSHLLSLLFTCKRLNRLVL 110
           MISAKRPR+C   A +SDLFDVLPDDL+IHLLCRLASSASSPS LL+LL TCKRLNRLVL
Sbjct: 1   MISAKRPRTCRNFAAESDLFDVLPDDLLIHLLCRLASSASSPSDLLNLLLTCKRLNRLVL 60

Query: 111 HPLVLSKAGPKALAFKTDNWCDSAHRFLKRCVDAGNSEASYMLGMIRFYCLRNRGSGASL 170
           HPLVLSKAGPKA A + + WCDSAHRFLKRCVDAGNSEASY LGMIRFYCLRNRGSGASL
Sbjct: 61  HPLVLSKAGPKAFAVRMEKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120

Query: 171 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 230
           MAKAAIKSHAPALYSLAVIQFNGSGGSK+DKDLQAGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKNDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 231 DGYGVRQNANEGRRLLIQANARELASVLLSSSRIWRPRHHQFGDVVDLTASSCSLLSDFG 290
           DGYGVR+N++EGRRLLIQANARELA+VLLSSSR+ + RHHQFG++ DLTA+ CSLLSDFG
Sbjct: 181 DGYGVRRNSDEGRRLLIQANARELAAVLLSSSRVRQQRHHQFGNLPDLTATRCSLLSDFG 240

Query: 291 CNVPAAEAHPVNRFLREWFESESGVEARVGLRLCSHGGCGRAETRAHEFRRCSVCGTVNY 350
           C+ PA E HPVN FLREWFESE GV ARVGLRLCSHGGCGR ETR HEFRRCS+CGTVNY
Sbjct: 241 CDFPATEPHPVNLFLREWFESERGVAARVGLRLCSHGGCGRPETRPHEFRRCSICGTVNY 300

Query: 351 CSRGCQAQDWKVRHKEECRALERWRDAD-GNIAGGMFDIVEEPEDPDIVGIV 402
           CSRGCQAQDWKVRHKEEC A++RW+DA+  N  GGMF+ VEE ED ++VG V
Sbjct: 301 CSRGCQAQDWKVRHKEECTAVQRWQDAEVDNAGGGMFNAVEEVEDANVVGTV 352

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BLAST of Spg007550 vs. NCBI nr
Match: XP_023516460.1 (F-box protein At1g67340-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 606.3 bits (1562), Expect = 1.9e-169
Identity = 295/352 (83.81%), Postives = 320/352 (90.91%), Query Frame = 0


Query: 51  MISAKRPRSCSKSAGKSDLFDVLPDDLVIHLLCRLASSASSPSHLLSLLFTCKRLNRLVL 110
           MISAKRPR+C   A +SDLFDVLPDDL+IHLLCRLASSASSPS LL+LL TCKRLNRLVL
Sbjct: 1   MISAKRPRTCRNFAAESDLFDVLPDDLLIHLLCRLASSASSPSDLLNLLLTCKRLNRLVL 60

Query: 111 HPLVLSKAGPKALAFKTDNWCDSAHRFLKRCVDAGNSEASYMLGMIRFYCLRNRGSGASL 170
           HPLVLSKAGPKA A + + WCDSAHRFLKRCVDAGNSEASY LGMIRFYCLRNRGSGASL
Sbjct: 61  HPLVLSKAGPKAFAVRMEKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120

Query: 171 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 230
           MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 231 DGYGVRQNANEGRRLLIQANARELASVLLSSSRIWRPRHHQFGDVVDLTASSCSLLSDFG 290
           DGYGVR+N++EGRRLLIQANARELA+VLLSSSR+ + RHHQFG++ DLTA+ CSLLSDFG
Sbjct: 181 DGYGVRRNSDEGRRLLIQANARELAAVLLSSSRVRQQRHHQFGNLPDLTATRCSLLSDFG 240

Query: 291 CNVPAAEAHPVNRFLREWFESESGVEARVGLRLCSHGGCGRAETRAHEFRRCSVCGTVNY 350
           C+ PA E HPVN FLREWFESE GV ARVGLRLCSHGGCGR ETR HEFRRCS+CGTVNY
Sbjct: 241 CDFPATEPHPVNLFLREWFESERGVAARVGLRLCSHGGCGRPETRPHEFRRCSICGTVNY 300

Query: 351 CSRGCQAQDWKVRHKEECRALERWRDAD-GNIAGGMFDIVEEPEDPDIVGIV 402
           CSRGCQAQDWKVRHKEEC A++RW+DA+  N  GG+F+ VEE ED ++VG V
Sbjct: 301 CSRGCQAQDWKVRHKEECTAVQRWQDAEVDNAGGGIFNAVEEVEDANVVGTV 352

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BLAST of Spg007550 vs. NCBI nr
Match: XP_022921747.1 (F-box protein At1g67340-like [Cucurbita moschata])

HSP 1 Score: 604.7 bits (1558), Expect = 5.6e-169
Identity = 295/352 (83.81%), Postives = 318/352 (90.34%), Query Frame = 0


Query: 51  MISAKRPRSCSKSAGKSDLFDVLPDDLVIHLLCRLASSASSPSHLLSLLFTCKRLNRLVL 110
           MISAKRPR+C   A +SDLFDVLPDDL+IHLLCRLASSASSPS LL+ L TCKRLNRLVL
Sbjct: 1   MISAKRPRTCRNFAAESDLFDVLPDDLLIHLLCRLASSASSPSDLLNPLLTCKRLNRLVL 60

Query: 111 HPLVLSKAGPKALAFKTDNWCDSAHRFLKRCVDAGNSEASYMLGMIRFYCLRNRGSGASL 170
           HPLVLSKAGPKA A + + WCDSAHRFLKRCVDAGNSEASY LGMIRFYCLRNRGSGASL
Sbjct: 61  HPLVLSKAGPKAFAVRMEKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120

Query: 171 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 230
           MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 231 DGYGVRQNANEGRRLLIQANARELASVLLSSSRIWRPRHHQFGDVVDLTASSCSLLSDFG 290
           DGYGVR+N +EGRRLLIQANARELA+VLLSSSR+ + RHHQFG++ DLTA+ CSLLSDFG
Sbjct: 181 DGYGVRRNTDEGRRLLIQANARELAAVLLSSSRVRQQRHHQFGNLPDLTATRCSLLSDFG 240

Query: 291 CNVPAAEAHPVNRFLREWFESESGVEARVGLRLCSHGGCGRAETRAHEFRRCSVCGTVNY 350
           C+ PA E HPVN FLREWFESE GV ARVGLRLCSHGGCGR ETR HEFRRCS+CGTVNY
Sbjct: 241 CDFPATEPHPVNLFLREWFESERGVAARVGLRLCSHGGCGRPETRPHEFRRCSICGTVNY 300

Query: 351 CSRGCQAQDWKVRHKEECRALERWRDAD-GNIAGGMFDIVEEPEDPDIVGIV 402
           CSRGCQAQDWKVRHKEEC A++RW+DA+  N  GGMF+ VEE ED ++VG V
Sbjct: 301 CSRGCQAQDWKVRHKEECTAVQRWQDAEVDNAGGGMFNAVEEVEDANVVGTV 352

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BLAST of Spg007550 vs. NCBI nr
Match: XP_022987090.1 (F-box protein At1g67340-like [Cucurbita maxima])

HSP 1 Score: 596.7 bits (1537), Expect = 1.5e-166
Identity = 290/352 (82.39%), Postives = 317/352 (90.06%), Query Frame = 0


Query: 51  MISAKRPRSCSKSAGKSDLFDVLPDDLVIHLLCRLASSASSPSHLLSLLFTCKRLNRLVL 110
           M SAKRPR+C   A +SDLFDVLPDDL+IHLLCRLASSASSPS LL+LL TCKRLNRLVL
Sbjct: 1   MSSAKRPRTCRNFAAESDLFDVLPDDLLIHLLCRLASSASSPSDLLNLLLTCKRLNRLVL 60

Query: 111 HPLVLSKAGPKALAFKTDNWCDSAHRFLKRCVDAGNSEASYMLGMIRFYCLRNRGSGASL 170
           HPLVLSKAGPKA A + + WCDSAHRFLKRC DAGNSEASY LGMIRFYCL NRGSGASL
Sbjct: 61  HPLVLSKAGPKAFAVRMEKWCDSAHRFLKRCADAGNSEASYTLGMIRFYCLTNRGSGASL 120

Query: 171 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 230
           MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 231 DGYGVRQNANEGRRLLIQANARELASVLLSSSRIWRPRHHQFGDVVDLTASSCSLLSDFG 290
           DGYGVR+N++EGRRLLIQANARELA+VLLSSSR+ + RHHQFG++ DLTA+ CSLLSDFG
Sbjct: 181 DGYGVRRNSDEGRRLLIQANARELAAVLLSSSRVRQQRHHQFGNLPDLTATRCSLLSDFG 240

Query: 291 CNVPAAEAHPVNRFLREWFESESGVEARVGLRLCSHGGCGRAETRAHEFRRCSVCGTVNY 350
           C+ PA E HPVN FLREWFESE GV  RVGLRLCSHGGCGR ETR HEFRRCS+CGTVNY
Sbjct: 241 CDFPATEPHPVNLFLREWFESERGVAGRVGLRLCSHGGCGRPETRPHEFRRCSICGTVNY 300

Query: 351 CSRGCQAQDWKVRHKEECRALERWRDADGNIAGG-MFDIVEEPEDPDIVGIV 402
           CSRGCQ+QDWK+RHKEEC A++RW+DA+ + AGG MF+ VEE ED ++VG V
Sbjct: 301 CSRGCQSQDWKIRHKEECTAVQRWQDAEVDNAGGVMFNAVEEVEDANVVGTV 352

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BLAST of Spg007550 vs. ExPASy Swiss-Prot
Match: Q9FYF9 (F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 9.4e-119
Identity = 215/357 (60.22%), Postives = 256/357 (71.71%), Query Frame = 0


Query: 38  LSTHATNTIPICKMISAKRPRSC----------SKSAGKSDLFDVLPDDLVIHLLCRLAS 97
           L +  T  +  C     ++ R C           ++   +DL D +PDDLVI +LC+L S
Sbjct: 2   LPSRKTKRVFSCDFTPGRKRRRCVVVPSSVSPVPENTTGADLLDSIPDDLVISILCKLGS 61

Query: 98  SASSPSHLLSLLFTCKRLNRLVLHPLVLSKAGPKALAFKTDNWCDSAHRFLKRCVDAGNS 157
           ++  P+  +++L TCKRL  L ++P+VLS+  PKA+A K  NW + +HRFLKRCVDAG+ 
Sbjct: 62  TSRCPADFINVLLTCKRLKGLAMNPIVLSRLSPKAIAVKAHNWSEYSHRFLKRCVDAGSL 121

Query: 158 EASYMLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGV 217
           EA Y LGMIRFYCL+NRG+GASLMAKAAI SHAPALYSLAVIQFNGSGGSK+DKDL+AGV
Sbjct: 122 EACYTLGMIRFYCLQNRGNGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGV 181

Query: 218 ALCARAAFLGHVDALRELGHCLQDGYGVRQNANEGRRLLIQANARELASVL---LSSSRI 277
           ALCARAAFLGHVDALRELGHCLQDGYGV QN +EGRR L+QANARELA+VL   + +   
Sbjct: 182 ALCARAAFLGHVDALRELGHCLQDGYGVPQNVSEGRRFLVQANARELAAVLSSGIQARST 241

Query: 278 WRPRHHQFGDVV-DLTASSCSLLSDFGCNVPAAEAHPVNRFLREWFESESGVEARVGLRL 337
           W         VV +    +C LLSDFGCNVPA E HP NRFL +WF    G     GLRL
Sbjct: 242 WLSLSQPPPPVVPNHGQQTCPLLSDFGCNVPAPETHPANRFLADWFAVRGGDCPGDGLRL 301

Query: 338 CSHGGCGRAETRAHEFRRCSVCGTVNYCSRGCQAQDWKVRHKEECRALERW-RDADG 380
           CSH GCGR ETR HEFRRCSVCG VNYCSR CQA DWK+RHK +C  ++RW  + DG
Sbjct: 302 CSHAGCGRPETRKHEFRRCSVCGVVNYCSRACQALDWKLRHKMDCAPVQRWLEEGDG 358

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BLAST of Spg007550 vs. ExPASy Swiss-Prot
Match: Q9FK27 (F-box protein At5g50450 OS=Arabidopsis thaliana OX=3702 GN=At5g50450 PE=2 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 8.0e-110
Identity = 209/325 (64.31%), Postives = 243/325 (74.77%), Query Frame = 0


Query: 70  FDVLPDDLVIHLLCRLASSASSPSHLLSLLFTCKRLNRLVLHPLVLSKAGPKALAFKTDN 129
           F+ L DDL+I +L +LA+SASSPS  L++L TCKRLNRL LHPLVLSKAG + LA   + 
Sbjct: 22  FEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHPLVLSKAGTQTLAVTAEK 81

Query: 130 WCDSAHRFLKRCVDAGNSEASYMLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVI 189
           W DS+H+FLK CV+AGN +ASY LGMIRFYCL+N  SGASLMAKAAIKSHAPALYSL+VI
Sbjct: 82  WSDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMAKAAIKSHAPALYSLSVI 141

Query: 190 QFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNANEGRRLLIQA 249
           QFNGSGGSK+DK+L+AGVALCAR+A+LGHVDALRELGHCLQDGYGV ++ +EGRRLLIQA
Sbjct: 142 QFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQDGYGVPRDVSEGRRLLIQA 201

Query: 250 NARELASVLLSSSRIWRPRHHQFGDVVDLTASSCSLLSDFGCNVPAAEAHPVNRFLREWF 309
           NARELA  L S   +      + GD           L+D    VP  E HPVNRFL+EWF
Sbjct: 202 NARELACSLRSYLSL------KSGD-------ENETLTDLSV-VPVQEIHPVNRFLKEWF 261

Query: 310 ESESGVEARVGLRLCSHGGCGRAETRAHEFRRCSVCGTVNYCSRGCQAQDWKVRHKEECR 369
            S   V+   GLR+CSHGGCGR ETRAHEFRRCSVCG VNYCSRGCQA DW+ +HK EC 
Sbjct: 262 -SSGRVDLAEGLRMCSHGGCGRPETRAHEFRRCSVCGKVNYCSRGCQALDWRAKHKVECT 321

Query: 370 ALERWRDADGNIAGGMFDIVEEPED 395
            L+ W  A   I      +  E +D
Sbjct: 322 PLDLWVAAAAEIGDDGEAVAVEIDD 331

[Close]

BLAST of Spg007550 vs. ExPASy Swiss-Prot
Match: Q09415 (SET domain-containing protein 14 OS=Caenorhabditis elegans OX=6239 GN=set-14 PE=4 SV=2)

HSP 1 Score: 47.4 bits (111), Expect = 4.5e-04
Identity = 19/44 (43.18%), Postives = 28/44 (63.64%), Query Frame = 0


Query: 329 CGRAETRAHEFRRCSVCGTVNYCSRGCQAQDWKVRHKEECRALE 373
           C +  T   E ++CS C  + YCS+ CQ  DWK+ HK EC+A++
Sbjct: 26  CNQCLTSMAELKKCSACRRLAYCSQECQRADWKL-HKVECKAIK 68

[Close]

BLAST of Spg007550 vs. ExPASy TrEMBL
Match: A0A6J1E1B7 (F-box protein At1g67340-like OS=Cucurbita moschata OX=3662 GN=LOC111429904 PE=4 SV=1)

HSP 1 Score: 604.7 bits (1558), Expect = 2.7e-169
Identity = 295/352 (83.81%), Postives = 318/352 (90.34%), Query Frame = 0


Query: 51  MISAKRPRSCSKSAGKSDLFDVLPDDLVIHLLCRLASSASSPSHLLSLLFTCKRLNRLVL 110
           MISAKRPR+C   A +SDLFDVLPDDL+IHLLCRLASSASSPS LL+ L TCKRLNRLVL
Sbjct: 1   MISAKRPRTCRNFAAESDLFDVLPDDLLIHLLCRLASSASSPSDLLNPLLTCKRLNRLVL 60

Query: 111 HPLVLSKAGPKALAFKTDNWCDSAHRFLKRCVDAGNSEASYMLGMIRFYCLRNRGSGASL 170
           HPLVLSKAGPKA A + + WCDSAHRFLKRCVDAGNSEASY LGMIRFYCLRNRGSGASL
Sbjct: 61  HPLVLSKAGPKAFAVRMEKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120

Query: 171 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 230
           MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 231 DGYGVRQNANEGRRLLIQANARELASVLLSSSRIWRPRHHQFGDVVDLTASSCSLLSDFG 290
           DGYGVR+N +EGRRLLIQANARELA+VLLSSSR+ + RHHQFG++ DLTA+ CSLLSDFG
Sbjct: 181 DGYGVRRNTDEGRRLLIQANARELAAVLLSSSRVRQQRHHQFGNLPDLTATRCSLLSDFG 240

Query: 291 CNVPAAEAHPVNRFLREWFESESGVEARVGLRLCSHGGCGRAETRAHEFRRCSVCGTVNY 350
           C+ PA E HPVN FLREWFESE GV ARVGLRLCSHGGCGR ETR HEFRRCS+CGTVNY
Sbjct: 241 CDFPATEPHPVNLFLREWFESERGVAARVGLRLCSHGGCGRPETRPHEFRRCSICGTVNY 300

Query: 351 CSRGCQAQDWKVRHKEECRALERWRDAD-GNIAGGMFDIVEEPEDPDIVGIV 402
           CSRGCQAQDWKVRHKEEC A++RW+DA+  N  GGMF+ VEE ED ++VG V
Sbjct: 301 CSRGCQAQDWKVRHKEECTAVQRWQDAEVDNAGGGMFNAVEEVEDANVVGTV 352

[Close]

BLAST of Spg007550 vs. ExPASy TrEMBL
Match: A0A6J1JFU9 (F-box protein At1g67340-like OS=Cucurbita maxima OX=3661 GN=LOC111484746 PE=4 SV=1)

HSP 1 Score: 596.7 bits (1537), Expect = 7.4e-167
Identity = 290/352 (82.39%), Postives = 317/352 (90.06%), Query Frame = 0


Query: 51  MISAKRPRSCSKSAGKSDLFDVLPDDLVIHLLCRLASSASSPSHLLSLLFTCKRLNRLVL 110
           M SAKRPR+C   A +SDLFDVLPDDL+IHLLCRLASSASSPS LL+LL TCKRLNRLVL
Sbjct: 1   MSSAKRPRTCRNFAAESDLFDVLPDDLLIHLLCRLASSASSPSDLLNLLLTCKRLNRLVL 60

Query: 111 HPLVLSKAGPKALAFKTDNWCDSAHRFLKRCVDAGNSEASYMLGMIRFYCLRNRGSGASL 170
           HPLVLSKAGPKA A + + WCDSAHRFLKRC DAGNSEASY LGMIRFYCL NRGSGASL
Sbjct: 61  HPLVLSKAGPKAFAVRMEKWCDSAHRFLKRCADAGNSEASYTLGMIRFYCLTNRGSGASL 120

Query: 171 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 230
           MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 231 DGYGVRQNANEGRRLLIQANARELASVLLSSSRIWRPRHHQFGDVVDLTASSCSLLSDFG 290
           DGYGVR+N++EGRRLLIQANARELA+VLLSSSR+ + RHHQFG++ DLTA+ CSLLSDFG
Sbjct: 181 DGYGVRRNSDEGRRLLIQANARELAAVLLSSSRVRQQRHHQFGNLPDLTATRCSLLSDFG 240

Query: 291 CNVPAAEAHPVNRFLREWFESESGVEARVGLRLCSHGGCGRAETRAHEFRRCSVCGTVNY 350
           C+ PA E HPVN FLREWFESE GV  RVGLRLCSHGGCGR ETR HEFRRCS+CGTVNY
Sbjct: 241 CDFPATEPHPVNLFLREWFESERGVAGRVGLRLCSHGGCGRPETRPHEFRRCSICGTVNY 300

Query: 351 CSRGCQAQDWKVRHKEECRALERWRDADGNIAGG-MFDIVEEPEDPDIVGIV 402
           CSRGCQ+QDWK+RHKEEC A++RW+DA+ + AGG MF+ VEE ED ++VG V
Sbjct: 301 CSRGCQSQDWKIRHKEECTAVQRWQDAEVDNAGGVMFNAVEEVEDANVVGTV 352

[Close]

BLAST of Spg007550 vs. ExPASy TrEMBL
Match: A0A5D3BGS7 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00550 PE=4 SV=1)

HSP 1 Score: 592.8 bits (1527), Expect = 1.1e-165
Identity = 295/353 (83.57%), Postives = 313/353 (88.67%), Query Frame = 0


Query: 51  MISAKRPRSCSKSAGKSDLFDVLPDDLVIHLLCRLASSASSPSHLLSLLFTCKRLNRLVL 110
           MIS KRPR+       SDLFDVLPDDL+IHLLC LA+SASSPS LL+LL TCKRLNRLVL
Sbjct: 1   MISVKRPRTRRNFTADSDLFDVLPDDLLIHLLCHLAASASSPSDLLNLLLTCKRLNRLVL 60

Query: 111 HPLVLSKAGPKALAFKTDNWCDSAHRFLKRCVDAGNSEASYMLGMIRFYCLRNRGSGASL 170
           HPLVLSKAGPKA A +  NWCDS+HRFLKRCVDAGNSEASY LGMIRFYCLRNRGSGASL
Sbjct: 61  HPLVLSKAGPKAFAVRMQNWCDSSHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120

Query: 171 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 230
           MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 231 DGYGVRQNANEGRRLLIQANARELASVLLSSSRIW-RPRHHQFGDVVDLTASSCSLLSDF 290
           DGYGVRQN++EGRRLL+QANARELA+VLLSSS IW + RH+Q G++ DLTA+ CSLLSDF
Sbjct: 181 DGYGVRQNSDEGRRLLVQANARELATVLLSSSSIWQQQRHNQSGNLPDLTATRCSLLSDF 240

Query: 291 GCNVPAAEAHPVNRFLREWFESESGVEARVGLRLCSHGGCGRAETRAHEFRRCSVCGTVN 350
           GCNVPA E HPVN FLREWFESE  V AR GLRLCSH GCGRAETR HEFRRCSVCGTVN
Sbjct: 241 GCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHSGCGRAETRPHEFRRCSVCGTVN 300

Query: 351 YCSRGCQAQDWKVRHKEECRALERWRDADGNIAGGMFDIVEEPEDP-DIVGIV 402
           YCSRGCQAQDWKVRHKEEC  ++RWRD D N AG MFDIVEE ED  +IVGIV
Sbjct: 301 YCSRGCQAQDWKVRHKEECTTVQRWRDEDANNAGEMFDIVEEVEDANNIVGIV 353

[Close]

BLAST of Spg007550 vs. ExPASy TrEMBL
Match: A0A1S3CLL0 (F-box protein At1g67340-like OS=Cucumis melo OX=3656 GN=LOC103502322 PE=4 SV=1)

HSP 1 Score: 592.8 bits (1527), Expect = 1.1e-165
Identity = 295/353 (83.57%), Postives = 313/353 (88.67%), Query Frame = 0


Query: 51  MISAKRPRSCSKSAGKSDLFDVLPDDLVIHLLCRLASSASSPSHLLSLLFTCKRLNRLVL 110
           MIS KRPR+       SDLFDVLPDDL+IHLLC LA+SASSPS LL+LL TCKRLNRLVL
Sbjct: 1   MISVKRPRTRRNFTADSDLFDVLPDDLLIHLLCHLAASASSPSDLLNLLLTCKRLNRLVL 60

Query: 111 HPLVLSKAGPKALAFKTDNWCDSAHRFLKRCVDAGNSEASYMLGMIRFYCLRNRGSGASL 170
           HPLVLSKAGPKA A +  NWCDS+HRFLKRCVDAGNSEASY LGMIRFYCLRNRGSGASL
Sbjct: 61  HPLVLSKAGPKAFAVRMQNWCDSSHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120

Query: 171 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 230
           MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 231 DGYGVRQNANEGRRLLIQANARELASVLLSSSRIW-RPRHHQFGDVVDLTASSCSLLSDF 290
           DGYGVRQN++EGRRLL+QANARELA+VLLSSS IW + RH+Q G++ DLTA+ CSLLSDF
Sbjct: 181 DGYGVRQNSDEGRRLLVQANARELATVLLSSSSIWQQQRHNQSGNLPDLTATRCSLLSDF 240

Query: 291 GCNVPAAEAHPVNRFLREWFESESGVEARVGLRLCSHGGCGRAETRAHEFRRCSVCGTVN 350
           GCNVPA E HPVN FLREWFESE  V AR GLRLCSH GCGRAETR HEFRRCSVCGTVN
Sbjct: 241 GCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHSGCGRAETRPHEFRRCSVCGTVN 300

Query: 351 YCSRGCQAQDWKVRHKEECRALERWRDADGNIAGGMFDIVEEPEDP-DIVGIV 402
           YCSRGCQAQDWKVRHKEEC  ++RWRD D N AG MFDIVEE ED  +IVGIV
Sbjct: 301 YCSRGCQAQDWKVRHKEECTTVQRWRDEDANNAGEMFDIVEEVEDANNIVGIV 353

[Close]

BLAST of Spg007550 vs. ExPASy TrEMBL
Match: A0A5A7UPI5 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00550 PE=4 SV=1)

HSP 1 Score: 592.0 bits (1525), Expect = 1.8e-165
Identity = 295/353 (83.57%), Postives = 313/353 (88.67%), Query Frame = 0


Query: 51  MISAKRPRSCSKSAGKSDLFDVLPDDLVIHLLCRLASSASSPSHLLSLLFTCKRLNRLVL 110
           MIS KRPR+       SDLFDVLPDDL+IHLLCRLA+SASSPS LL+LL TCKRLNRLVL
Sbjct: 1   MISVKRPRTRRNFTADSDLFDVLPDDLLIHLLCRLAASASSPSDLLNLLLTCKRLNRLVL 60

Query: 111 HPLVLSKAGPKALAFKTDNWCDSAHRFLKRCVDAGNSEASYMLGMIRFYCLRNRGSGASL 170
           HPLVLSKAGPKA A +  NWCDS+HRFLKRCVDAGNSEASY LGMIRFYCLRNRGSGASL
Sbjct: 61  HPLVLSKAGPKAFAVRMQNWCDSSHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120

Query: 171 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 230
           MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 231 DGYGVRQNANEGRRLLIQANARELASVLLSSSRIW-RPRHHQFGDVVDLTASSCSLLSDF 290
           DGYGVRQN++EGRRLL+QANARELA+VLLSSS IW + RH+Q G++ DLTA+ CSLLSDF
Sbjct: 181 DGYGVRQNSDEGRRLLVQANARELATVLLSSSSIWQQQRHNQSGNLPDLTATRCSLLSDF 240

Query: 291 GCNVPAAEAHPVNRFLREWFESESGVEARVGLRLCSHGGCGRAETRAHEFRRCSVCGTVN 350
           GCNVPA E HPVN FLREWFESE  V AR GLRLCSH GCGRAETR HEFRRCSVCGTVN
Sbjct: 241 GCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHSGCGRAETRPHEFRRCSVCGTVN 300

Query: 351 YCSRGCQAQDWKVRHKEECRALERWRDADGNIAGGMFDIVEEPEDP-DIVGIV 402
           YCSRGCQAQDWKVRHKEEC  ++RWRD D N A  MFDIVEE ED  +IVGIV
Sbjct: 301 YCSRGCQAQDWKVRHKEECTTVQRWRDEDANNADEMFDIVEEVEDANNIVGIV 353

[Close]

BLAST of Spg007550 vs. TAIR 10
Match: AT1G67340.1 (HCP-like superfamily protein with MYND-type zinc finger )

HSP 1 Score: 428.3 bits (1100), Expect = 6.7e-120
Identity = 215/357 (60.22%), Postives = 256/357 (71.71%), Query Frame = 0


Query: 38  LSTHATNTIPICKMISAKRPRSC----------SKSAGKSDLFDVLPDDLVIHLLCRLAS 97
           L +  T  +  C     ++ R C           ++   +DL D +PDDLVI +LC+L S
Sbjct: 2   LPSRKTKRVFSCDFTPGRKRRRCVVVPSSVSPVPENTTGADLLDSIPDDLVISILCKLGS 61

Query: 98  SASSPSHLLSLLFTCKRLNRLVLHPLVLSKAGPKALAFKTDNWCDSAHRFLKRCVDAGNS 157
           ++  P+  +++L TCKRL  L ++P+VLS+  PKA+A K  NW + +HRFLKRCVDAG+ 
Sbjct: 62  TSRCPADFINVLLTCKRLKGLAMNPIVLSRLSPKAIAVKAHNWSEYSHRFLKRCVDAGSL 121

Query: 158 EASYMLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGV 217
           EA Y LGMIRFYCL+NRG+GASLMAKAAI SHAPALYSLAVIQFNGSGGSK+DKDL+AGV
Sbjct: 122 EACYTLGMIRFYCLQNRGNGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGV 181

Query: 218 ALCARAAFLGHVDALRELGHCLQDGYGVRQNANEGRRLLIQANARELASVL---LSSSRI 277
           ALCARAAFLGHVDALRELGHCLQDGYGV QN +EGRR L+QANARELA+VL   + +   
Sbjct: 182 ALCARAAFLGHVDALRELGHCLQDGYGVPQNVSEGRRFLVQANARELAAVLSSGIQARST 241

Query: 278 WRPRHHQFGDVV-DLTASSCSLLSDFGCNVPAAEAHPVNRFLREWFESESGVEARVGLRL 337
           W         VV +    +C LLSDFGCNVPA E HP NRFL +WF    G     GLRL
Sbjct: 242 WLSLSQPPPPVVPNHGQQTCPLLSDFGCNVPAPETHPANRFLADWFAVRGGDCPGDGLRL 301

Query: 338 CSHGGCGRAETRAHEFRRCSVCGTVNYCSRGCQAQDWKVRHKEECRALERW-RDADG 380
           CSH GCGR ETR HEFRRCSVCG VNYCSR CQA DWK+RHK +C  ++RW  + DG
Sbjct: 302 CSHAGCGRPETRKHEFRRCSVCGVVNYCSRACQALDWKLRHKMDCAPVQRWLEEGDG 358

[Close]

BLAST of Spg007550 vs. TAIR 10
Match: AT5G50450.1 (HCP-like superfamily protein with MYND-type zinc finger )

HSP 1 Score: 398.7 bits (1023), Expect = 5.7e-111
Identity = 209/325 (64.31%), Postives = 243/325 (74.77%), Query Frame = 0


Query: 70  FDVLPDDLVIHLLCRLASSASSPSHLLSLLFTCKRLNRLVLHPLVLSKAGPKALAFKTDN 129
           F+ L DDL+I +L +LA+SASSPS  L++L TCKRLNRL LHPLVLSKAG + LA   + 
Sbjct: 22  FEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHPLVLSKAGTQTLAVTAEK 81

Query: 130 WCDSAHRFLKRCVDAGNSEASYMLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVI 189
           W DS+H+FLK CV+AGN +ASY LGMIRFYCL+N  SGASLMAKAAIKSHAPALYSL+VI
Sbjct: 82  WSDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMAKAAIKSHAPALYSLSVI 141

Query: 190 QFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNANEGRRLLIQA 249
           QFNGSGGSK+DK+L+AGVALCAR+A+LGHVDALRELGHCLQDGYGV ++ +EGRRLLIQA
Sbjct: 142 QFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQDGYGVPRDVSEGRRLLIQA 201

Query: 250 NARELASVLLSSSRIWRPRHHQFGDVVDLTASSCSLLSDFGCNVPAAEAHPVNRFLREWF 309
           NARELA  L S   +      + GD           L+D    VP  E HPVNRFL+EWF
Sbjct: 202 NARELACSLRSYLSL------KSGD-------ENETLTDLSV-VPVQEIHPVNRFLKEWF 261

Query: 310 ESESGVEARVGLRLCSHGGCGRAETRAHEFRRCSVCGTVNYCSRGCQAQDWKVRHKEECR 369
            S   V+   GLR+CSHGGCGR ETRAHEFRRCSVCG VNYCSRGCQA DW+ +HK EC 
Sbjct: 262 -SSGRVDLAEGLRMCSHGGCGRPETRAHEFRRCSVCGKVNYCSRGCQALDWRAKHKVECT 321

Query: 370 ALERWRDADGNIAGGMFDIVEEPED 395
            L+ W  A   I      +  E +D
Sbjct: 322 PLDLWVAAAAEIGDDGEAVAVEIDD 331

[Close]

BLAST of Spg007550 vs. TAIR 10
Match: AT2G24640.1 (ubiquitin-specific protease 19 )

HSP 1 Score: 45.4 bits (106), Expect = 1.2e-04
Identity = 19/41 (46.34%), Postives = 25/41 (60.98%), Query Frame = 0


Query: 329 CGRAETRAHEFRRCSVCGTVNYCSRGCQAQDWKVRHKEECR 370
           CG+A T     ++CS C +V YCS  CQ  DWK  HK +C+
Sbjct: 67  CGKATT-----KKCSRCKSVRYCSAACQTSDWKSGHKLKCK 102

[Close]

BLAST of Spg007550 vs. TAIR 10
Match: AT5G65450.1 (ubiquitin-specific protease 17 )

HSP 1 Score: 43.1 bits (100), Expect = 6.0e-04
Identity = 17/30 (56.67%), Postives = 20/30 (66.67%), Query Frame = 0


Query: 341 RCSVCGTVNYCSRGCQAQDWKVRHKEECRA 371
           RCS C +V YCS  CQ   W+  HKEECR+
Sbjct: 67  RCSQCKSVRYCSSKCQILHWRRGHKEECRS 96

[Close]

BLAST of Spg007550 vs. TAIR 10
Match: AT1G17110.1 (ubiquitin-specific protease 15 )

HSP 1 Score: 42.7 bits (99), Expect = 7.9e-04
Identity = 17/32 (53.12%), Postives = 21/32 (65.62%), Query Frame = 0


Query: 341 RCSVCGTVNYCSRGCQAQDWKVRHKEECRALE 373
           RCS C +V YCS  CQ   W+V HK+EC  +E
Sbjct: 140 RCSRCKSVRYCSGKCQIIHWRVAHKDECVPVE 171

The following BLAST results are available for this feature:

BLAST of Spg007550 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6589385.1	6.0e-171	82.32	F-box protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7023063.1	1.5e-169	83.81	F-box protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023516460.1	1.9e-169	83.81	F-box protein At1g67340-like [Cucurbita pepo subsp. pepo]	[more]
XP_022921747.1	5.6e-169	83.81	F-box protein At1g67340-like [Cucurbita moschata]	[more]
XP_022987090.1	1.5e-166	82.39	F-box protein At1g67340-like [Cucurbita maxima]	[more]

BLAST of Spg007550 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FYF9	9.4e-119	60.22	F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1	[more]
Q9FK27	8.0e-110	64.31	F-box protein At5g50450 OS=Arabidopsis thaliana OX=3702 GN=At5g50450 PE=2 SV=1	[more]
Q09415	4.5e-04	43.18	SET domain-containing protein 14 OS=Caenorhabditis elegans OX=6239 GN=set-14 PE=...	[more]

BLAST of Spg007550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E1B7	2.7e-169	83.81	F-box protein At1g67340-like OS=Cucurbita moschata OX=3662 GN=LOC111429904 PE=4 ...	[more]
A0A6J1JFU9	7.4e-167	82.39	F-box protein At1g67340-like OS=Cucurbita maxima OX=3661 GN=LOC111484746 PE=4 SV...	[more]
A0A5D3BGS7	1.1e-165	83.57	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00550 ...	[more]
A0A1S3CLL0	1.1e-165	83.57	F-box protein At1g67340-like OS=Cucumis melo OX=3656 GN=LOC103502322 PE=4 SV=1	[more]
A0A5A7UPI5	1.8e-165	83.57	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00550 ...	[more]

BLAST of Spg007550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67340.1	6.7e-120	60.22	HCP-like superfamily protein with MYND-type zinc finger	[more]
AT5G50450.1	5.7e-111	64.31	HCP-like superfamily protein with MYND-type zinc finger	[more]
AT2G24640.1	1.2e-04	46.34	ubiquitin-specific protease 19	[more]
AT5G65450.1	6.0e-04	56.67	ubiquitin-specific protease 17	[more]
AT1G17110.1	7.9e-04	53.13	ubiquitin-specific protease 15	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 122..310 e-value: 3.9E-18 score: 68.0
None	No IPR available	GENE3D	6.10.140.2220		coord: 311..373 e-value: 4.0E-11 score: 44.4
None	No IPR available	PANTHER	PTHR46758:SF9	HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN	coord: 51..381
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 123..250
None	No IPR available	SUPERFAMILY	144232	HIT/MYND zinc finger-like	coord: 324..373
IPR002893	Zinc finger, MYND-type	PFAM	PF01753	zf-MYND	coord: 329..368 e-value: 1.5E-7 score: 31.4
IPR002893	Zinc finger, MYND-type	PROSITE	PS50865	ZF_MYND_2	coord: 326..368 score: 11.127352
IPR044508	F-box protein At5g50450/At1g67340-like	PANTHER	PTHR46758	MYND DOMAIN-CONTAINING	coord: 51..381
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 61..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg007550.1	Spg007550.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005515	protein binding