Spg007488 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg007488
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	UBP1-associated proteins 1C-like isoform X3
Location	scaffold2: 1473747 .. 1476673 (-)
RNA-Seq Expression	Spg007488
Synteny	Spg007488

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGGGTTCCGAATTCTCGAAGGGGGAATCGAGCCACGTAATTTGATCGATATTTGGTTAATACCTCATGTAGAACTCTTTAGGTGGGTTATGAGCATTACTTTTAGTATGTTATTGAAATTTCTAGAGTTATATCTACTTAGTTCTTGTACGTTTGGGTGGATTCTAATAAGTTATTGAACATTTAATTTTGTGTCTTATGTTTAGAGTGTTAGTTCCACTAGGTTAATGTTTACATGTATCAAACATCTGACGAACCTATTTGAAAATTTTCATTCAGTTATTTTAAGCCTTAAATACTATCCTTGTCGTGTCATGTAAGGTCGAGACTTATTTGACATAAAATTGAAAAAAATTAAAAAAAAAAAAGTTTAAAGGTTGTTGTTACATGAGGAAAGTTTGTTTTATATCAACCCGGACCCAATAACAATAACTTCTCTCTATTATATATATATAGTCTTTTTTTTTAGCCTTTAACAAGGAATTAATGAGAAATTATCAAGAAAACCACTACAATGTGCACCATGGTTTGAATGTTTTTTTTTAACATGTGGGATGAAGAGATTGAATTATTTGGTCATTAGAACAAACTTAATATCAGTTGAAATATGCTTATGTTAGCGCTAGATTGAGACATCGACAATCACATAAAAAAAATTCATATTAAAACTAGTTACGAGTGATTATGACGATTATTAAATACATATTTGAGTACACATGACACATTTGATTTTCCGTCATTTAAAAATCACTATAATGCATGCTCTAAATTGAATTCGAATAACCACGGCCGGCTTTCAATGAAACGAAACAATATTACAATGATAAAATAAAATAAAATAAAACCAAATAGTTTGTTTTTCTTTATTAGGATATCTGTCATGATCTTCTTCACTTCACCACGGAAGCCACGTTTTCGTCTCTTTTTATTCTCCTTCCACACTCCCATTTCCATCCTCCTCAACTTTAGTTTCACCAATCTCTCCCTTTGCCTTATCGCCTCGTTTAATTTCTGATGGATTTCAGGTTCCGAGCCATCCACAACAAACCGCCGCCCGCCGCTTCCAGTTCCGGAAGCTCCTCCGATCACCTGCTGCGAGGTTCGTAACCTTAATCGAAATGCTACATATAGAAATAATCTCTCTGTTTAATTTCTTCAGATCTTTTTCAAATGCTTCATCGAAATGGAAACATACATTTCAGTTTTCTAAGAAGATTTAATCTAATAATCTAATCAGATGATTCTCCAAACGCGGAGCTCGTGAAACAGAGGATTAAAGAAGAGATAATGATCAGAGAGATTGCGAGCCGACGAATGCTCGAGGCGGAGATCAGGAGGGAGCTCATCATCGAGCAAGAACTAGCGATGCATAGGGCTGCGGGCCGGACGGAGAGGTTAGCATTGGACGAACATTTTGCAATGCGATTGTTGAACCAGAGGCTGAATCACGTTGTGGATCAGCCTTCCACAGGTCTATTAGCGGTTCCAGGTTTCAGTTCTTCGCTCGACTCCCAAACGATTCGTTCGTTTTCGGAGCCTCGAAAAGAAGAACCGAAGGCTTTGGAAGATGAAAAGGACAAGTTAATTTTGCTGGTTAGTCGAATACTATATCTACTCTCCATATCTCTCCTTATTTGATTCTCAAATTACGTTCATACAGTTTCTGATTTGGATTGAAAGTAGTTTATGATGGTTGACATTATTATGGTGTTAAATAACATTTTGGTTTATAAACATGTGATTTTCTTTCTTCTTCTTCTTTTTTTTTTTTTTTTTGTTAGCCTTGAGCTTTGAAAATATCTTGGTTTCAAACTTTTAAGTTTTACTTTATTTAATTTTTAAACTTTTAAAATATTTATTTTTATCCCTAAAATTATAAAATGTAATATATTTTTGAGTTCAACAATATCATTGTGTAAATGAATCTTAGTGCATGTTTGGAAGTGATTTTGAAATTGCTAAAATCACTTTTGTCACGTTCGAAATCTCTCTAAAACATACTTTTAATTATGCAAATCAATTTCATGTTTGATTTTACACTTTTAAATGTGATTTACACATCATTAAAATTGATTTTGAATTATAAAGACGTGTTTCGAAATAATTTTGAATACGACAAAAGTGATTTTAACAATTTCAAAATCACTCTCAAACATGCAATTAGATAACAAAATAATTGCTTATGGGAGTTCAATAAATCAAAATAAAACATGGAAAAAGAATGGTGAGATTTAAATTACTTTTCAAACTAAAATGATGTCATTGACCTTGTATTATAGTTGGATAGTAACTGTCATGTATCCTCAACTAAACGTTATCGAAGTAAAAAATAGACATCTGCATATATTATCTAATATATAGGTAATTAGACTAAGGATATATAAACTGGAAGATTGAATAATTATTTATGTTCTGGGAATCGAAATTGCAGCCAAAGCCAGACCCAGAAAAATTCAAAGCGAAGAGGAAAGCCGAGGGTCCACCGACGGAGGCTGATACCAATACAGAGCCATTAATTCCTTCGATTAGTTCGAAGAAATTAGCAAAGAAAGAGTTCATTTGTACAATGTGCAAAATCACAACAACAAGCGAAATTACACTGAATACACACTTAAAAGGCAAGAAGCACAAGGCCAAAGAGGGACGTGGCCTAGAAACTGGGGAAGTCCACAAGCAACCAAGCCCACCGGAACAGGCACCACCCCTTGAAAACAAGGGCAGCTTCAAATTCTGGTGCGAAACGTGCCTAGTTGGAACTCGAAGCTTGGTTGTTATGGAGACACATAACAAGGGGAAGAAGCATAGGGCTCGCCTTTTGAAACTTGGTCAGTGCAAATTGGACGAGCAAAAGGAACCGAATGGGCTTATGTCTTGTGCATCCCCAGAAGGAAGAGGAGATGACTCAAATTCCATCACCTTATAA

mRNA sequence

ATGTTGGGGTTCCGAATTCTCGAAGGGGGAATCGAGCCACGTAATTTGATCGATATTTGGTTCCGAGCCATCCACAACAAACCGCCGCCCGCCGCTTCCAGTTCCGGAAGCTCCTCCGATCACCTGCTGCGAGATGATTCTCCAAACGCGGAGCTCGTGAAACAGAGGATTAAAGAAGAGATAATGATCAGAGAGATTGCGAGCCGACGAATGCTCGAGGCGGAGATCAGGAGGGAGCTCATCATCGAGCAAGAACTAGCGATGCATAGGGCTGCGGGCCGGACGGAGAGGTTAGCATTGGACGAACATTTTGCAATGCGATTGTTGAACCAGAGGCTGAATCACGTTGTGGATCAGCCTTCCACAGGTCTATTAGCGGTTCCAGGTTTCAGTTCTTCGCTCGACTCCCAAACGATTCGTTCGTTTTCGGAGCCTCGAAAAGAAGAACCGAAGGCTTTGGAAGATGAAAAGGACAAGTTAATTTTGCTGCCAAAGCCAGACCCAGAAAAATTCAAAGCGAAGAGGAAAGCCGAGGGTCCACCGACGGAGGCTGATACCAATACAGAGCCATTAATTCCTTCGATTAGTTCGAAGAAATTAGCAAAGAAAGAGTTCATTTGTACAATGTGCAAAATCACAACAACAAGCGAAATTACACTGAATACACACTTAAAAGGCAAGAAGCACAAGGCCAAAGAGGGACGTGGCCTAGAAACTGGGGAAGTCCACAAGCAACCAAGCCCACCGGAACAGGCACCACCCCTTGAAAACAAGGGCAGCTTCAAATTCTGGTGCGAAACGTGCCTAGTTGGAACTCGAAGCTTGGTTGTTATGGAGACACATAACAAGGGGAAGAAGCATAGGGCTCGCCTTTTGAAACTTGGTCAGTGCAAATTGGACGAGCAAAAGGAACCGAATGGGCTTATGTCTTGTGCATCCCCAGAAGGAAGAGGAGATGACTCAAATTCCATCACCTTATAA

Coding sequence (CDS)

ATGTTGGGGTTCCGAATTCTCGAAGGGGGAATCGAGCCACGTAATTTGATCGATATTTGGTTCCGAGCCATCCACAACAAACCGCCGCCCGCCGCTTCCAGTTCCGGAAGCTCCTCCGATCACCTGCTGCGAGATGATTCTCCAAACGCGGAGCTCGTGAAACAGAGGATTAAAGAAGAGATAATGATCAGAGAGATTGCGAGCCGACGAATGCTCGAGGCGGAGATCAGGAGGGAGCTCATCATCGAGCAAGAACTAGCGATGCATAGGGCTGCGGGCCGGACGGAGAGGTTAGCATTGGACGAACATTTTGCAATGCGATTGTTGAACCAGAGGCTGAATCACGTTGTGGATCAGCCTTCCACAGGTCTATTAGCGGTTCCAGGTTTCAGTTCTTCGCTCGACTCCCAAACGATTCGTTCGTTTTCGGAGCCTCGAAAAGAAGAACCGAAGGCTTTGGAAGATGAAAAGGACAAGTTAATTTTGCTGCCAAAGCCAGACCCAGAAAAATTCAAAGCGAAGAGGAAAGCCGAGGGTCCACCGACGGAGGCTGATACCAATACAGAGCCATTAATTCCTTCGATTAGTTCGAAGAAATTAGCAAAGAAAGAGTTCATTTGTACAATGTGCAAAATCACAACAACAAGCGAAATTACACTGAATACACACTTAAAAGGCAAGAAGCACAAGGCCAAAGAGGGACGTGGCCTAGAAACTGGGGAAGTCCACAAGCAACCAAGCCCACCGGAACAGGCACCACCCCTTGAAAACAAGGGCAGCTTCAAATTCTGGTGCGAAACGTGCCTAGTTGGAACTCGAAGCTTGGTTGTTATGGAGACACATAACAAGGGGAAGAAGCATAGGGCTCGCCTTTTGAAACTTGGTCAGTGCAAATTGGACGAGCAAAAGGAACCGAATGGGCTTATGTCTTGTGCATCCCCAGAAGGAAGAGGAGATGACTCAAATTCCATCACCTTATAA

Protein sequence

MLGFRILEGGIEPRNLIDIWFRAIHNKPPPAASSSGSSSDHLLRDDSPNAELVKQRIKEEIMIREIASRRMLEAEIRRELIIEQELAMHRAAGRTERLALDEHFAMRLLNQRLNHVVDQPSTGLLAVPGFSSSLDSQTIRSFSEPRKEEPKALEDEKDKLILLPKPDPEKFKAKRKAEGPPTEADTNTEPLIPSISSKKLAKKEFICTMCKITTTSEITLNTHLKGKKHKAKEGRGLETGEVHKQPSPPEQAPPLENKGSFKFWCETCLVGTRSLVVMETHNKGKKHRARLLKLGQCKLDEQKEPNGLMSCASPEGRGDDSNSITL

Homology

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BLAST of Spg007488 vs. NCBI nr
Match: XP_038880353.1 (zinc finger protein 385B [Benincasa hispida])

HSP 1 Score: 286.6 bits (732), Expect = 2.7e-73
Identity = 169/305 (55.41%), Postives = 207/305 (67.87%), Query Frame = 0


Query: 17  IDIWFRAIHNKPPPAASSSGSSSDHLLRDDSPNAELVKQRIKEEIMIREIASRRMLEAEI 76
           +D  FRA  NK P  A+S+   S   L  DS NAEL+KQR+K+EIMIREIASRRMLEAEI
Sbjct: 1   MDFRFRANDNKSPATATSTSVRSFDQLLQDSLNAELLKQRMKDEIMIREIASRRMLEAEI 60

Query: 77  RRELIIEQELAMHRAAGRTERLALDEHFAMRLLNQ-RLNHVVDQPSTGLLAVPGFSSSLD 136
           RRELIIEQELA  R  GRTE L  D+ F++RLL+Q R+NH +  P  GLL VPG SSS  
Sbjct: 61  RRELIIEQELAKRRVEGRTEGLLFDDQFSVRLLDQIRMNHNIVDPFRGLLTVPGSSSS-- 120

Query: 137 SQTIRSFSEPRKEEPKALEDEKDKLILLPKPDPEKFKAKRKAEGPPTEADTNTEPLIPSI 196
              +     P+ EEPK  +D+K+KLI+LPKPDP KF+ KRKAEG   E DT+ +     I
Sbjct: 121 PLPVCPVPNPQNEEPKPFDDKKNKLIVLPKPDPAKFEGKRKAEGEAAEVDTDQKTPTHWI 180

Query: 197 SSKKLAKKEFICTMCKITTTSEITLNTHLKGKKHKAKEGRGLETGE----------VHKQ 256
           SSKKLAK+EF+C+MC +  TSEI+ N HLKGKKH AKEGR L+T E          +  Q
Sbjct: 181 SSKKLAKEEFVCSMCNVQVTSEISFNAHLKGKKHMAKEGRSLQTQEPSPAEDLKEKLDNQ 240

Query: 257 PSPPEQAPPLENKGSFKFWCETCLVGTRSLVVMETHNKGKKHRARLLKLG-QCKLDEQK- 309
               ++   L+NK  FKFWC+ C +GT  + +M +HN GKKH+ARLLKL  Q KLD+QK 
Sbjct: 241 KKDADKKSALKNKVHFKFWCKICEIGTPCMAIMVSHNNGKKHKARLLKLSQQSKLDDQKD 300

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BLAST of Spg007488 vs. NCBI nr
Match: XP_008443847.1 (PREDICTED: uncharacterized protein LOC103487343 [Cucumis melo] >KAA0035096.1 UBP1-associated proteins 1C-like isoform X3 [Cucumis melo var. makuwa] >TYJ95982.1 UBP1-associated proteins 1C-like isoform X3 [Cucumis melo var. makuwa])

HSP 1 Score: 235.3 bits (599), Expect = 7.2e-58
Identity = 152/312 (48.72%), Postives = 192/312 (61.54%), Query Frame = 0


Query: 21  FRAIHNKPPPAASSSGSSSDHLLRDDSPNAELVKQRIKEEIMIREIASRRMLEAEIRREL 80
           FRAI NK P  A+   S+SD  ++DDS N EL KQRIKEEI +REI  RRMLEAEIRREL
Sbjct: 5   FRAIDNKSPATAA---STSDQPIQDDSLNEELWKQRIKEEITMREIVRRRMLEAEIRREL 64

Query: 81  IIEQELAMHRAAGRTE-RLALDEHFAMRLLNQRLNHVVD-QPSTGLLAVPGFSSSLDSQT 140
           ++E+ELA+ RA G+TE  L+ D  F +R +N+ +N ++D   ST LLAVPG +SSL+   
Sbjct: 65  LVERELAIRRARGQTEGLLSFDNQFLVRFMNEGVNRILDPSSSTALLAVPGSNSSLN--- 124

Query: 141 IRSFSEPRKEEPKALEDEKDKLILLPKPDPEKFKAKRKAEGPPTEADT--------NTEP 200
                   KEEPK  EDE +KLI L +PDP KF  KRKA G    A            + 
Sbjct: 125 -------LKEEPKPEEDEMNKLITLERPDPGKFVGKRKAVGDQEAAAAMGGGGERDQRQT 184

Query: 201 LIPS--ISSKKLAKKEFICTMCKITTTSEITLNTHLKGKKHKAKEGRGLETGEVHKQPSP 260
           +IP+  I SKKLAK+EF+C+MC +  TSEI+ N H+ GKKHKAKEGR       HK+P+ 
Sbjct: 185 IIPTPWIGSKKLAKEEFVCSMCNVKATSEISFNAHINGKKHKAKEGRRQVQQTTHKEPNQ 244

Query: 261 PEQ---------------APPLENKGSFKFWCETCLVGTRSLVVMETHNKGKKHRARLLK 305
            E+                P LE     KF CE C VG   + VM +HN G+KH+ARLLK
Sbjct: 245 GEEDLKEKLDHPVKNIDKNPALEKNKRLKFRCEICNVGVPWMAVMVSHNNGRKHKARLLK 303

[Close]

BLAST of Spg007488 vs. NCBI nr
Match: XP_022926958.1 (uncharacterized protein LOC111433915 [Cucurbita moschata])

HSP 1 Score: 158.3 bits (399), Expect = 1.1e-34
Identity = 92/122 (75.41%), Postives = 101/122 (82.79%), Query Frame = 0


Query: 16  LIDIWFRAIHNKPPPAASSSGSSSDHLLRDDSPNAELVKQRIKEEIMIREIASRRMLEAE 75
           L+D   RA+ NKP  AASSS  SSDH LRDDSPNAELVKQRIKEEI  RE ASRRMLEAE
Sbjct: 54  LLDFRVRAVDNKPLLAASSSECSSDHPLRDDSPNAELVKQRIKEEITNRETASRRMLEAE 113

Query: 76  IRRELIIEQELAMHRAAGRTERLALDEHFAMRLLNQRLNHVVDQPST-GLLAVPGFSSSL 135
           IRRELIIEQEL++ RA GRTE LA DEHFAMR+L+ RLNH+VDQ S+ GLLAVPG  SSL
Sbjct: 114 IRRELIIEQELSILRATGRTEGLAFDEHFAMRMLDLRLNHIVDQSSSRGLLAVPGSCSSL 173

Query: 136 DS 137
           +S
Sbjct: 174 NS 175

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BLAST of Spg007488 vs. NCBI nr
Match: XP_010047067.2 (uncharacterized protein LOC104436029 [Eucalyptus grandis])

HSP 1 Score: 137.9 bits (346), Expect = 1.6e-28
Identity = 104/278 (37.41%), Postives = 149/278 (53.60%), Query Frame = 0


Query: 40  DHLLRDDSPNAELVKQRIKEEIMIREIASRRMLEAEIRRELIIEQELAMHRAA-GRTERL 99
           D  L  ++   E+ KQ+I+EEI+  E+A R+MLE E+RREL++E+++ +  A  G     
Sbjct: 55  DPYLVRETIQREIEKQKIREEIIASEVARRQMLEEEVRRELMLERQMVLRSAGDGLPFEG 114

Query: 100 ALDEHFAMRLLNQRLNHVVDQPSTGLLAVPGFSSSLDSQTIRS-FSEPRKEEPKALEDEK 159
                F     +  L+ +  +     LA  G ++   S  IRS  + P + +P   E  K
Sbjct: 115 KSTMWFGFNRGHPALHRLESRAMEDHLAFFGHNAVDMSPLIRSPEATPTEIKP---ELNK 174

Query: 160 DKLILLPKPDPEKFKAKRKAEGPPTEADTNTEPLIPSISSKKLAKKEFICTMCKITTTSE 219
           D+LI+LP+PDP    AKRKA   P +AD      + + S KK  K+E+ C +C+++ TSE
Sbjct: 175 DRLIMLPRPDPNLSNAKRKASTSPVDADE-----LSTFSQKKKTKEEWTCALCQVSATSE 234

Query: 220 ITLNTHLKGKKHKAKEG--------RGLETGEVH------KQPSPPEQAPPLEN-----K 279
             L  HL+GKKHK KE          G     V+      K  S P+ A  LEN     K
Sbjct: 235 KGLKEHLEGKKHKTKEASLARKIGKEGTTESRVNQELKDSKMLSRPKMAQNLENTEGSRK 294

Query: 280 GSFKFWCETCLVGTRSLVVMETHNKGKKHRARLLKLGQ 297
            +F+FWC  C +G  S+ VME+H KGKKH ARL +LGQ
Sbjct: 295 KNFQFWCAMCQIGAFSVTVMESHQKGKKHIARLQELGQ 324

[Close]

BLAST of Spg007488 vs. NCBI nr
Match: XP_030456348.1 (uncharacterized protein LOC115677338 [Syzygium oleosum])

HSP 1 Score: 136.3 bits (342), Expect = 4.6e-28
Identity = 115/319 (36.05%), Postives = 164/319 (51.41%), Query Frame = 0


Query: 10  GIEPRNLIDIWFRAIHNKPPPAASSSGSSSDHLLRDDSPNAELVKQRIKEEIMIREIASR 69
           G  P     + F    N  P   S   +  D  L  +S   E+ KQ+I+EEI+  E+A R
Sbjct: 25  GFFPDQAWRVDFPGTRNTRPYLNSEFDAMRDPYLVRESIQREMEKQKIREEIIASEVARR 84

Query: 70  RMLEAEIRRELIIEQELAMHRAAGRTERLALDEHFAMRLLNQR----LNHVVDQPSTGLL 129
           +MLE E+RREL++E+++ + R AG  + L  D   AM     R    L+ + ++ + G L
Sbjct: 85  QMLEDEVRRELMLERQMVL-RCAG--DGLPFDGKSAMWFGFNRGHPALHRLENRATEGHL 144

Query: 130 AVPGFSSSLDSQTIRSFSEPRKEEPKALEDE------KDKLILLPKPDPEKFKAKRKAEG 189
           A  G +++  S        P    P+A+  E      KD+LI+LP+PDP    AKRKA  
Sbjct: 145 AFVGRNAADVSPL------PLIRSPEAIPTEIKPELNKDRLIMLPRPDPNLPGAKRKAST 204

Query: 190 PPTEADTNTEPLIPSISSKKLAKKEFICTMCKITTTSEITLNTHLKGKKHKAKEG----- 249
            P +A       + + S KK  K+E+ C +C+++ TSE  L  HL+GKKHK KE      
Sbjct: 205 SPADAGE-----LSTFSRKKKTKEEWTCALCQVSATSEKGLKEHLEGKKHKIKEASLAQK 264

Query: 250 ---RGLETGEVH------KQPSPPEQAPPLEN-KGS-----FKFWCETCLVGTRSLVVME 299
               G    +VH      K+ S  + A  LEN +GS     F+FWCE C +G  S  VME
Sbjct: 265 IGKEGNTESKVHQELKDSKKLSGLKMAQKLENTEGSRKNKNFQFWCEMCQIGAFSKTVME 324

[Close]

BLAST of Spg007488 vs. ExPASy Swiss-Prot
Match: Q8VD12 (Zinc finger protein 385A OS=Mus musculus OX=10090 GN=Znf385a PE=1 SV=2)

HSP 1 Score: 48.5 bits (114), Expect = 1.6e-04
Identity = 42/153 (27.45%), Postives = 60/153 (39.22%), Query Frame = 0


Query: 164 PKPDPEKFKAKRKAEGPPTEADTNTEPLIP--SISSKKLAKKEFICTMCKITTTSEITLN 223
           P   PE  +   K EG      T+    +P  S   ++ AK+   C +CK+   S   L 
Sbjct: 163 PPSVPESGQGVTKGEG-----GTSVPASLPGGSKEEEEKAKRLLYCALCKVAVNSLSQLE 222

Query: 224 THLKGKKHKA--KEGRGLETGEVHKQPSPPEQAPPLENKGSFKFWCETCLVGTRSLVVME 283
            H KG KHK   +   GL   + + +  PP    P        F CE C V   S V ++
Sbjct: 223 AHNKGTKHKTILEARSGLGPIKAYPRLGPPTPGEPEAPAQDRTFHCEICNVKVNSEVQLK 282

Query: 284 THNKGKKHRARLLKLGQCKLDEQKEPNGLMSCA 313
            H   ++HR  +       L   K+P G    A
Sbjct: 283 QHISSRRHRDGVAGKPNPLLSRHKKPRGAAELA 310

[Close]

BLAST of Spg007488 vs. ExPASy TrEMBL
Match: A0A5D3B800 (UBP1-associated proteins 1C-like isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold271G00520 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 3.5e-58
Identity = 152/312 (48.72%), Postives = 192/312 (61.54%), Query Frame = 0


Query: 21  FRAIHNKPPPAASSSGSSSDHLLRDDSPNAELVKQRIKEEIMIREIASRRMLEAEIRREL 80
           FRAI NK P  A+   S+SD  ++DDS N EL KQRIKEEI +REI  RRMLEAEIRREL
Sbjct: 5   FRAIDNKSPATAA---STSDQPIQDDSLNEELWKQRIKEEITMREIVRRRMLEAEIRREL 64

Query: 81  IIEQELAMHRAAGRTE-RLALDEHFAMRLLNQRLNHVVD-QPSTGLLAVPGFSSSLDSQT 140
           ++E+ELA+ RA G+TE  L+ D  F +R +N+ +N ++D   ST LLAVPG +SSL+   
Sbjct: 65  LVERELAIRRARGQTEGLLSFDNQFLVRFMNEGVNRILDPSSSTALLAVPGSNSSLN--- 124

Query: 141 IRSFSEPRKEEPKALEDEKDKLILLPKPDPEKFKAKRKAEGPPTEADT--------NTEP 200
                   KEEPK  EDE +KLI L +PDP KF  KRKA G    A            + 
Sbjct: 125 -------LKEEPKPEEDEMNKLITLERPDPGKFVGKRKAVGDQEAAAAMGGGGERDQRQT 184

Query: 201 LIPS--ISSKKLAKKEFICTMCKITTTSEITLNTHLKGKKHKAKEGRGLETGEVHKQPSP 260
           +IP+  I SKKLAK+EF+C+MC +  TSEI+ N H+ GKKHKAKEGR       HK+P+ 
Sbjct: 185 IIPTPWIGSKKLAKEEFVCSMCNVKATSEISFNAHINGKKHKAKEGRRQVQQTTHKEPNQ 244

Query: 261 PEQ---------------APPLENKGSFKFWCETCLVGTRSLVVMETHNKGKKHRARLLK 305
            E+                P LE     KF CE C VG   + VM +HN G+KH+ARLLK
Sbjct: 245 GEEDLKEKLDHPVKNIDKNPALEKNKRLKFRCEICNVGVPWMAVMVSHNNGRKHKARLLK 303

[Close]

BLAST of Spg007488 vs. ExPASy TrEMBL
Match: A0A1S3B9S7 (uncharacterized protein LOC103487343 OS=Cucumis melo OX=3656 GN=LOC103487343 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 3.5e-58
Identity = 152/312 (48.72%), Postives = 192/312 (61.54%), Query Frame = 0


Query: 21  FRAIHNKPPPAASSSGSSSDHLLRDDSPNAELVKQRIKEEIMIREIASRRMLEAEIRREL 80
           FRAI NK P  A+   S+SD  ++DDS N EL KQRIKEEI +REI  RRMLEAEIRREL
Sbjct: 5   FRAIDNKSPATAA---STSDQPIQDDSLNEELWKQRIKEEITMREIVRRRMLEAEIRREL 64

Query: 81  IIEQELAMHRAAGRTE-RLALDEHFAMRLLNQRLNHVVD-QPSTGLLAVPGFSSSLDSQT 140
           ++E+ELA+ RA G+TE  L+ D  F +R +N+ +N ++D   ST LLAVPG +SSL+   
Sbjct: 65  LVERELAIRRARGQTEGLLSFDNQFLVRFMNEGVNRILDPSSSTALLAVPGSNSSLN--- 124

Query: 141 IRSFSEPRKEEPKALEDEKDKLILLPKPDPEKFKAKRKAEGPPTEADT--------NTEP 200
                   KEEPK  EDE +KLI L +PDP KF  KRKA G    A            + 
Sbjct: 125 -------LKEEPKPEEDEMNKLITLERPDPGKFVGKRKAVGDQEAAAAMGGGGERDQRQT 184

Query: 201 LIPS--ISSKKLAKKEFICTMCKITTTSEITLNTHLKGKKHKAKEGRGLETGEVHKQPSP 260
           +IP+  I SKKLAK+EF+C+MC +  TSEI+ N H+ GKKHKAKEGR       HK+P+ 
Sbjct: 185 IIPTPWIGSKKLAKEEFVCSMCNVKATSEISFNAHINGKKHKAKEGRRQVQQTTHKEPNQ 244

Query: 261 PEQ---------------APPLENKGSFKFWCETCLVGTRSLVVMETHNKGKKHRARLLK 305
            E+                P LE     KF CE C VG   + VM +HN G+KH+ARLLK
Sbjct: 245 GEEDLKEKLDHPVKNIDKNPALEKNKRLKFRCEICNVGVPWMAVMVSHNNGRKHKARLLK 303

[Close]

BLAST of Spg007488 vs. ExPASy TrEMBL
Match: A0A6J1EJN4 (uncharacterized protein LOC111433915 OS=Cucurbita moschata OX=3662 GN=LOC111433915 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 5.4e-35
Identity = 92/122 (75.41%), Postives = 101/122 (82.79%), Query Frame = 0


Query: 16  LIDIWFRAIHNKPPPAASSSGSSSDHLLRDDSPNAELVKQRIKEEIMIREIASRRMLEAE 75
           L+D   RA+ NKP  AASSS  SSDH LRDDSPNAELVKQRIKEEI  RE ASRRMLEAE
Sbjct: 54  LLDFRVRAVDNKPLLAASSSECSSDHPLRDDSPNAELVKQRIKEEITNRETASRRMLEAE 113

Query: 76  IRRELIIEQELAMHRAAGRTERLALDEHFAMRLLNQRLNHVVDQPST-GLLAVPGFSSSL 135
           IRRELIIEQEL++ RA GRTE LA DEHFAMR+L+ RLNH+VDQ S+ GLLAVPG  SSL
Sbjct: 114 IRRELIIEQELSILRATGRTEGLAFDEHFAMRMLDLRLNHIVDQSSSRGLLAVPGSCSSL 173

Query: 136 DS 137
           +S
Sbjct: 174 NS 175

[Close]

BLAST of Spg007488 vs. ExPASy TrEMBL
Match: A0A6J1HN47 (uncharacterized protein LOC111465139 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465139 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 2.9e-28
Identity = 82/121 (67.77%), Postives = 93/121 (76.86%), Query Frame = 0


Query: 17  IDIWFRAIHNKPPPAASSSGSSSDHLLRDDSPNAELVKQRIKEEIMIREIASRRMLEAEI 76
           +D   RA+ N+P  AASSS  SSDH LRDDSPNAELVKQRIK +I  REIASRRMLEAE 
Sbjct: 1   MDFGVRAVDNQPLLAASSSECSSDHPLRDDSPNAELVKQRIKGKITNREIASRRMLEAET 60

Query: 77  RRELIIEQELAMHRAAGRTERLALDEHFAMRLLNQRLNHVVDQPSTG-LLAVPGFSSSLD 136
           R ELIIEQEL++ RA G TE LA DEHF MR+L+ RLN +VDQ S+  LLA PG  SSL+
Sbjct: 61  RMELIIEQELSILRATGWTEGLAFDEHFPMRMLDLRLNQIVDQSSSRVLLAAPGSCSSLN 120

[Close]

BLAST of Spg007488 vs. ExPASy TrEMBL
Match: A0A059CKW4 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_C00251 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 4.9e-28
Identity = 103/278 (37.05%), Postives = 148/278 (53.24%), Query Frame = 0


Query: 40  DHLLRDDSPNAELVKQRIKEEIMIREIASRRMLEAEIRRELIIEQELAMHRAA-GRTERL 99
           D  L  ++   E+ KQ+I+EEI+  E+A R+MLE E+RREL++E+++ + RA  G     
Sbjct: 55  DPYLVRETIQREIEKQKIREEIIASEVARRQMLEEEVRRELMLERQMVLRRAGDGLPFEG 114

Query: 100 ALDEHFAMRLLNQRLNHVVDQPSTGLLAVPGFSSSLDSQTIRS-FSEPRKEEPKALEDEK 159
                F     +  L+ +  +     LA  G ++   S  IRS  + P + +P   E  K
Sbjct: 115 KSTMWFGFNPGHPALHRLESRAMEDHLAFFGHNAVDMSPLIRSPEATPTEIKP---ELNK 174

Query: 160 DKLILLPKPDPEKFKAKRKAEGPPTEADTNTEPLIPSISSKKLAKKEFICTMCKITTTSE 219
           D+LI+LP+PDP    AKRKA     +AD      + + S KK  K+E+ C +C+++ TSE
Sbjct: 175 DRLIMLPRPDPNLSSAKRKASTSSVDADE-----LSTFSQKKKTKEEWTCALCQVSATSE 234

Query: 220 ITLNTHLKGKKHKAKEG--------RGLETGEVH------KQPSPPEQAPPLEN-----K 279
             L  HL+GKKHK KE          G     V+      K  S P+    LEN     K
Sbjct: 235 KGLKEHLEGKKHKTKEASLARKIGKEGTTESRVNQELKDSKMLSRPKMVQNLENTEGSRK 294

Query: 280 GSFKFWCETCLVGTRSLVVMETHNKGKKHRARLLKLGQ 297
            +F+FWC  C +G  S+ VME+H KGKKH ARL +LGQ
Sbjct: 295 KNFQFWCAMCQIGAFSVTVMESHQKGKKHIARLQELGQ 324

[Close]

BLAST of Spg007488 vs. TAIR 10
Match: AT2G24030.1 (zinc ion binding;nucleic acid binding )

HSP 1 Score: 70.9 bits (172), Expect = 2.2e-12
Identity = 92/320 (28.75%), Postives = 143/320 (44.69%), Query Frame = 0


Query: 21  FRAI-HNKPPPAA------------------SSSGSSSDHLLRDDSPNAELVKQRIKEEI 80
           +RAI +N+PPPA                   S  G  S+  +R ++   E+ K++I++EI
Sbjct: 5   YRAIDNNRPPPATDTTPSPSLKPNFPFLSERSMPGQQSEDQVR-EAIKREIEKEQIRQEI 64

Query: 81  MIREIASRRMLEAEIRRELIIEQELAMHRAAGRTERLALDEHFAM-----RLLNQ---RL 140
           +I E A +R L AE+ +E+ IE+E+A+ R +     ++L+E   M     +L NQ   + 
Sbjct: 65  IIAEAARKRELIAEVLQEMAIEREMAIRRVS--DTEMSLEEKLTMWINQRKLPNQNQNQF 124

Query: 141 NHVVDQPST---GLLAVPGFSSSLDSQTIRSFSEPRKEE---PKALEDEKDKLILLPKPD 200
           N+   Q  +    L+    ++S L S  ++     +  E      LE  K+ LI+L + D
Sbjct: 125 NNFFRQKYSYIDSLINTGSYNSLLTSPMMQLPQLQQMSEATGTSMLESNKENLIVLNRAD 184

Query: 201 PEKFKAKRKAEGPPTEADTNTEPLIPSISSKKLAKKEFICTMCKITTTSE--------IT 260
               K K  + G          P     S  +  K++FI  + +     E          
Sbjct: 185 IIGAKPKADSVGTMQLPKLQQMPEATGTSVLESNKEQFI-VLARADPVGEKRKAEDIQTG 244

Query: 261 LNTHLKGKKHKAKEGR----GLETGEV--HKQPSPPEQAPPLENKGSF----KFWCETCL 290
           LN  L+ K+ KAKE       LETGE+   K P   +     + +G      KFWCE C 
Sbjct: 245 LNEDLQVKRPKAKESEAKAMSLETGEIVSSKVPCSGKLGSGKKAEGKLRTNQKFWCEICK 304

[Close]

BLAST of Spg007488 vs. TAIR 10
Match: AT5G61190.1 (putative endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain )

HSP 1 Score: 54.3 bits (129), Expect = 2.1e-07
Identity = 43/143 (30.07%), Postives = 58/143 (40.56%), Query Frame = 0


Query: 195 ISSKKLAKKEFICTMCKITTTSEITLNTHLKGKKH------------------------- 254
           I S+  A  EF+C MC +   S+I  N+HL+GKKH                         
Sbjct: 358 IESRAQANAEFVCLMCNVVCQSQIVFNSHLRGKKHANMLSQSEALIVSTKLQEKGVGEKE 417

Query: 255 --------------KAKEGRGL-------ETGEVHKQPSPPEQAPPLENKGSFKFWCETC 292
                         KA+E + L       E G+  K    P++   L N  S K+ C  C
Sbjct: 418 QPSETVAELQLQSQKAQEKQVLVDSKKLPEKGDEVK--GQPKEMTALRN-ASAKYICRMC 477

[Close]

BLAST of Spg007488 vs. TAIR 10
Match: AT2G24030.2 (zinc ion binding;nucleic acid binding )

HSP 1 Score: 47.4 bits (111), Expect = 2.6e-05
Identity = 67/242 (27.69%), Postives = 102/242 (42.15%), Query Frame = 0


Query: 80  LIIEQELAMHRAAGRTERLALDEHFAM-----RLLNQ---RLNHVVDQPST---GLLAVP 139
           + IE+E+A+ R +     ++L+E   M     +L NQ   + N+   Q  +    L+   
Sbjct: 1   MAIEREMAIRRVS--DTEMSLEEKLTMWINQRKLPNQNQNQFNNFFRQKYSYIDSLINTG 60

Query: 140 GFSSSLDSQTIRSFSEPRKEE---PKALEDEKDKLILLPKPDPEKFKAKRKAEGPPTEAD 199
            ++S L S  ++     +  E      LE  K+ LI+L + D    K K  + G      
Sbjct: 61  SYNSLLTSPMMQLPQLQQMSEATGTSMLESNKENLIVLNRADIIGAKPKADSVGTMQLPK 120

Query: 200 TNTEPLIPSISSKKLAKKEFICTMCKITTTSE--------ITLNTHLKGKKHKAKEGR-- 259
               P     S  +  K++FI  + +     E          LN  L+ K+ KAKE    
Sbjct: 121 LQQMPEATGTSVLESNKEQFI-VLARADPVGEKRKAEDIQTGLNEDLQVKRPKAKESEAK 180

Query: 260 --GLETGEV--HKQPSPPEQAPPLENKGSF----KFWCETCLVGTRSLVVMETHNKGKKH 290
              LETGE+   K P   +     + +G      KFWCE C VGT   +VM  H  GKKH
Sbjct: 181 AMSLETGEIVSSKVPCSGKLGSGKKAEGKLRTNQKFWCEICKVGTYCQIVMRDHELGKKH 239

The following BLAST results are available for this feature:

BLAST of Spg007488 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880353.1	2.7e-73	55.41	zinc finger protein 385B [Benincasa hispida]	[more]
XP_008443847.1	7.2e-58	48.72	PREDICTED: uncharacterized protein LOC103487343 [Cucumis melo] >KAA0035096.1 UBP...	[more]
XP_022926958.1	1.1e-34	75.41	uncharacterized protein LOC111433915 [Cucurbita moschata]	[more]
XP_010047067.2	1.6e-28	37.41	uncharacterized protein LOC104436029 [Eucalyptus grandis]	[more]
XP_030456348.1	4.6e-28	36.05	uncharacterized protein LOC115677338 [Syzygium oleosum]	[more]

BLAST of Spg007488 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VD12	1.6e-04	27.45	Zinc finger protein 385A OS=Mus musculus OX=10090 GN=Znf385a PE=1 SV=2	[more]

BLAST of Spg007488 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3B800	3.5e-58	48.72	UBP1-associated proteins 1C-like isoform X3 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3B9S7	3.5e-58	48.72	uncharacterized protein LOC103487343 OS=Cucumis melo OX=3656 GN=LOC103487343 PE=...	[more]
A0A6J1EJN4	5.4e-35	75.41	uncharacterized protein LOC111433915 OS=Cucurbita moschata OX=3662 GN=LOC1114339...	[more]
A0A6J1HN47	2.9e-28	67.77	uncharacterized protein LOC111465139 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A059CKW4	4.9e-28	37.05	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_C00251 PE=4 SV...	[more]

BLAST of Spg007488 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G24030.1	2.2e-12	28.75	zinc ion binding;nucleic acid binding	[more]
AT5G61190.1	2.1e-07	30.07	putative endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain	[more]
AT2G24030.2	2.6e-05	27.69	zinc ion binding;nucleic acid binding	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 263..287 e-value: 120.0 score: 3.7 coord: 205..229 e-value: 0.071 score: 22.2
IPR003604	Matrin/U1-C-like, C2H2-type zinc finger	SMART	SM00451	ZnF_U1_5	coord: 260..294 e-value: 0.056 score: 22.2 coord: 202..236 e-value: 5.5E-4 score: 29.2
None	No IPR available	PFAM	PF12874	zf-met	coord: 263..287 e-value: 4.5E-5 score: 23.7 coord: 205..229 e-value: 2.6E-8 score: 34.0
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 242..293 e-value: 2.7E-7 score: 32.0 coord: 183..234 e-value: 1.1E-10 score: 42.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 141..182
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 225..256
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..191
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 304..326
None	No IPR available	PANTHER	PTHR47487	OS06G0651300 PROTEIN-RELATED	coord: 21..307
None	No IPR available	PANTHER	PTHR47487:SF8	OS06G0651300 PROTEIN	coord: 21..307
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 194..233
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 253..291

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg007488.1	Spg007488.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding