Spg007401 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACATGTTGGTATATGCGGTCATCTCATTATTTAGACGGGGACCTGTGGATGGTTCACAAGTTTGTGGACAGGCACGAATGTCCTATTGATGTAGTAAAAAGCGATCACCGTCAAGCTATAACTTGGTTTGTGGGTGAGTGTGTCAAGTCACTCTTAAAGGTAAATGACAAGATCCAGTGTCGGCCACACGACGTGATTGATTACATGAGAAGGAAACATGGTGTGAACGTTAGCTACGAAAAGGCGTGGAGAGGTCGTGAACTTGCGCTTACATCTATCAGGGGGTCACCAGAATCTTCGTATGCACTAATTCCAGCATTTTCGGCTGCCCTAATCCAAAAAAAACAAGGTTTGAGAGTGTATTACATTGTATGTAACAGATCAACATTTTTGTTAAGTACGGCTGTCTTTGTTGTTCGTAATAACCAGTATCTTTTTTTTTGGCATGTTGTTAGGCACATATACTGCGATTGATGTTGATGACCAAGGCAGGTTTAAGTACTTTTTCATGTGCCTTTCAGCTTCTATACATGCATGGAGTTTCTATTTTCCAGTCATTTCTGTGGATGGTGCAACGTTAAAGCACAAATTTTTCGGGACCCTTCTATCTGTGCGCATAGTAGACGAGAACTCTCAAATTGTCCCATTGGCTTTTGCAATCGTAGATTCAAAGAATGATGCTTCATGGACATGGTTCTTTCGCAATTTGAAGGCTGTATTGGGCGAGCACAAAGAATTGGTAATTGTGTCTGATGGGCATCTTAGTATGCCTAATGGGGTCAGGAATAGCTACAATTCTACAAAGGTCTTTGTGCATGGCACTTGTTGAGGAACCTAAAAAAAGATACAAGTCCAACCTGATTGACAATGCATTCCACAACTGTGCTAGGGCGTACACAGCCGTAGATTATGAGTATTACATGAGACAGTTAGAAGACATAGTCTCCTCTATTAGGACAGAGTTAGAAGGTATGGGGAAAGCTAGGTGGGCAAGGGCATTTTTTTGTAAGGAAGAGGTATACAATAATGACAACCAATGCATCTGAGAACATTAATGCAATGTTGAGGGATGCACGTGAACTTCCCGTTATTCATCTTCTCGAAGCTGCACGTAGCTTGACTCAGAGATGGTTTTATGAACGTAGGACATTTTCAAGTTTTCAGCGCACAGATCTATGTCCATAGGCAGAAAATATGTTGCGGTCTTCTCTAAAACAAAGTCGGACTATGGACATAAGTTTTGAATTTACTTATTACAAATAATTACCATCCATAAAATATATTTTTCTTTTTTTTTGTTAATACACTGTACATGTTGATTGTTTCAGATTTACCACATCAATCAATATCAATTTGAAGTACATGATCGTACCAAACAATTCGAGGTTAACATCTTGGCTCAAACATGCACGTGTAGACGGTGGGATCTGGATATAATACCATGCGCACATGCATGCCTTGCGTTATCTCGGAGGAACCTGGAATTTCAAGCCTACTCACATGAGTTCTATCGTATTTCAAATTTAGTTCAATTATACAGCAAAGATGTGCGACCAATTGGCAATGTTGCACAATTTTTGAACAATGCAGGTGGTGGTGATGATCCTATTCTCCCTCCAGCCACCAAACGATCAGTTGACAGACCTAAAAAAAAGGATCCCATCATGCATAGAAGGGAGGCCAACTATAAAGTGTGGACGGTCCGGGCAAGTTGGCCACAACCGTAG ATGACATGTTGGTATATGCGGTCATCTCATTATTTAGACGGGGACCTGTGGATGGTTCACAAGTTTGTGGACAGGCACGAATGTCCTATTGATGTAGTAAAAAGCGATCACCGTCAAGCTATAACTTGGTTTGTGGGTGAGTGTGTCAAGTCACTCTTAAAGGTAAATGACAAGATCCAGTGTCGGCCACACGACGTGATTGATTACATGAGAAGGAAACATGGTGTGAACGTTAGCTACGAAAAGGCGTGGAGAGGTCGTGAACTTGCGCTTACATCTATCAGGGGGTCACCAGAATCTTCGTATGCACTAATTCCAGCATTTTCGGCTGCCCTAATCCAAAAAAAACAAGGCACATATACTGCGATTGATGTTGATGACCAAGGCAGACGGTGGGATCTGGATATAATACCATGCGCACATGCATGCCTTGCGTTATCTCGGAGGAACCTGGAATTTCAAGCCTACTCACATGAGTTCTATCGTATTTCAAATTTAGTTCAATTATACAGCAAAGATGTGCGACCAATTGGCAATGTTGCACAATTTTTGAACAATGCAGGTGGTGGTGATGATCCTATTCTCCCTCCAGCCACCAAACGATCAGTTGACAGACCTAAAAAAAAGGATCCCATCATGCATAGAAGGGAGGCCAACTATAAAGTGTGGACGGTCCGGGCAAGTTGGCCACAACCGTAG ATGACATGTTGGTATATGCGGTCATCTCATTATTTAGACGGGGACCTGTGGATGGTTCACAAGTTTGTGGACAGGCACGAATGTCCTATTGATGTAGTAAAAAGCGATCACCGTCAAGCTATAACTTGGTTTGTGGGTGAGTGTGTCAAGTCACTCTTAAAGGTAAATGACAAGATCCAGTGTCGGCCACACGACGTGATTGATTACATGAGAAGGAAACATGGTGTGAACGTTAGCTACGAAAAGGCGTGGAGAGGTCGTGAACTTGCGCTTACATCTATCAGGGGGTCACCAGAATCTTCGTATGCACTAATTCCAGCATTTTCGGCTGCCCTAATCCAAAAAAAACAAGGCACATATACTGCGATTGATGTTGATGACCAAGGCAGACGGTGGGATCTGGATATAATACCATGCGCACATGCATGCCTTGCGTTATCTCGGAGGAACCTGGAATTTCAAGCCTACTCACATGAGTTCTATCGTATTTCAAATTTAGTTCAATTATACAGCAAAGATGTGCGACCAATTGGCAATGTTGCACAATTTTTGAACAATGCAGGTGGTGGTGATGATCCTATTCTCCCTCCAGCCACCAAACGATCAGTTGACAGACCTAAAAAAAAGGATCCCATCATGCATAGAAGGGAGGCCAACTATAAAGTGTGGACGGTCCGGGCAAGTTGGCCACAACCGTAG MTCWYMRSSHYLDGDLWMVHKFVDRHECPIDVVKSDHRQAITWFVGECVKSLLKVNDKIQCRPHDVIDYMRRKHGVNVSYEKAWRGRELALTSIRGSPESSYALIPAFSAALIQKKQGTYTAIDVDDQGRRWDLDIIPCAHACLALSRRNLEFQAYSHEFYRISNLVQLYSKDVRPIGNVAQFLNNAGGGDDPILPPATKRSVDRPKKKDPIMHRREANYKVWTVRASWPQP Homology
BLAST of Spg007401 vs. NCBI nr
Match: KAA0061274.1 (uncharacterized protein E6C27_scaffold455G001170 [Cucumis melo var. makuwa]) HSP 1 Score: 179.9 bits (455), Expect = 2.6e-41 Identity = 76/127 (59.84%), Postives = 98/127 (77.17%), Query Frame = 0
BLAST of Spg007401 vs. NCBI nr
Match: KAA0061274.1 (uncharacterized protein E6C27_scaffold455G001170 [Cucumis melo var. makuwa]) HSP 1 Score: 72.8 bits (177), Expect = 4.4e-09 Identity = 35/64 (54.69%), Postives = 40/64 (62.50%), Query Frame = 0
HSP 2 Score: 179.5 bits (454), Expect = 3.4e-41 Identity = 76/127 (59.84%), Postives = 97/127 (76.38%), Query Frame = 0
BLAST of Spg007401 vs. NCBI nr
Match: TYK29863.1 (MuDRA-like transposase [Cucumis melo var. makuwa]) HSP 1 Score: 99.8 bits (247), Expect = 3.4e-17 Identity = 45/80 (56.25%), Postives = 55/80 (68.75%), Query Frame = 0
HSP 2 Score: 176.8 bits (447), Expect = 2.2e-40 Identity = 74/127 (58.27%), Postives = 97/127 (76.38%), Query Frame = 0
BLAST of Spg007401 vs. NCBI nr
Match: XP_008455803.1 (PREDICTED: uncharacterized protein LOC103495899 [Cucumis melo]) HSP 1 Score: 173.7 bits (439), Expect = 1.8e-39 Identity = 73/127 (57.48%), Postives = 96/127 (75.59%), Query Frame = 0
BLAST of Spg007401 vs. NCBI nr
Match: XP_008455803.1 (PREDICTED: uncharacterized protein LOC103495899 [Cucumis melo]) HSP 1 Score: 100.5 bits (249), Expect = 2.0e-17 Identity = 46/80 (57.50%), Postives = 54/80 (67.50%), Query Frame = 0
HSP 2 Score: 169.5 bits (428), Expect = 3.5e-38 Identity = 72/127 (56.69%), Postives = 93/127 (73.23%), Query Frame = 0
BLAST of Spg007401 vs. ExPASy TrEMBL
Match: A0A5A7V1Z6 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold455G001170 PE=4 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 1.2e-41 Identity = 76/127 (59.84%), Postives = 98/127 (77.17%), Query Frame = 0
BLAST of Spg007401 vs. ExPASy TrEMBL
Match: A0A5A7V1Z6 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold455G001170 PE=4 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 2.1e-09 Identity = 35/64 (54.69%), Postives = 40/64 (62.50%), Query Frame = 0
HSP 2 Score: 179.5 bits (454), Expect = 1.6e-41 Identity = 76/127 (59.84%), Postives = 97/127 (76.38%), Query Frame = 0
BLAST of Spg007401 vs. ExPASy TrEMBL
Match: A0A5D3E198 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold208G001100 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 1.6e-17 Identity = 45/80 (56.25%), Postives = 55/80 (68.75%), Query Frame = 0
HSP 2 Score: 176.8 bits (447), Expect = 1.1e-40 Identity = 74/127 (58.27%), Postives = 97/127 (76.38%), Query Frame = 0
BLAST of Spg007401 vs. ExPASy TrEMBL
Match: A0A1S3C300 (uncharacterized protein LOC103495899 OS=Cucumis melo OX=3656 GN=LOC103495899 PE=4 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 8.9e-40 Identity = 73/127 (57.48%), Postives = 96/127 (75.59%), Query Frame = 0
BLAST of Spg007401 vs. ExPASy TrEMBL
Match: A0A1S3C300 (uncharacterized protein LOC103495899 OS=Cucumis melo OX=3656 GN=LOC103495899 PE=4 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 9.6e-18 Identity = 46/80 (57.50%), Postives = 54/80 (67.50%), Query Frame = 0
HSP 2 Score: 169.5 bits (428), Expect = 1.7e-38 Identity = 72/127 (56.69%), Postives = 93/127 (73.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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