Spg007173 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg007173
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description50S ribosomal protein L31
Locationscaffold9: 46757574 .. 46758859 (+)
RNA-Seq ExpressionSpg007173
SyntenySpg007173
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CACTTATCCTCTCTTCATCGCACTCGAACAGGCAGCAATGGCGCTCAACCTAACAAATTCCTTCCTTCAACGGCCAATTTCCACGGCCGTCGCACCGCCGAAGACTAAGGTACTTTCCCCATTTTCTTCACTCGTCATTTTTCCGAGACGGCGATTGTTCATTTCTATTTCCCCCAATTTCGGCGTAATTTCCAGGAATTTGGAACGAGAAGTCACCGGCCGGTGGTGACCTGCCGGAAAAAGGATCTGCACCCCCAATTTTACGAGGATGCGAAGGTTTATTGCAACGGAGAACTGGTGATGACGACGGGTGGGACCCAGAAAGAGTATTCGGTGGACGTGTGGTCGGGAAATCACCCGTTCTATTTGGGCAGCCGCTCCGCCCTGCTCGTCGACGCCGACCAGGTCGAGAAATTCCGCAAGAAATTCGGAGAGCTCTCGCAGTTGATGGAGATTCCTGTCCTGAAAGGAGAAATCGTGCTACCCACAAAACGCAAATCCGGCGGCAAAGGAAAGAAGAAGTAGAAGATTGTGAAGAGTTCAATTGGCCTGGTAATCAGTTAAATCCACAGTGCATATTGAGATTTTTGGTTCTTCTATTGCATTATATATTTGTGTAATTTAGCACAATCGAAACTAATTTGTCTGAATCGAACTGTTCGTTTCTGTTAGTTGCCTTGCTGAATGTTGATTAAGAGTCTGATGGGTCTGCTATAGAATTATTCCACTTTCTCTACATTTTTTTCTCCAGGACAGTTCAGATGTTCGTTAGATGTTTGGTGGGTGAGAAAAAATCATGAAGGAAAAGAAAGTTAAAGAGAAATTAGAATAGGAATTGATGGTGATTGACGATACAAATTCTTCAAGTTTTGGGGCATTTTATAGTACTCTTGTTTCTCTGCAAGTGAGTTGCTTGTTTTTGAATTTTGGTTCTATGGATCTTTAGCTTATGAGAGGGCGCTATATGAAATTACGACAATAGTTGCAATATCATATCCTAATATGAAAGGAAGATGATGGGCATAGCATAAGATGGTAGACAAATAGTTTGAACAAGTGGACATGGAGAATGTCAATTGTTTCGGGATTTGTTGATGGTTGTGACTTACAGGTTCATGGTTCGGGAGCGACAAGTCTAAAAGCTTGATGGTCGTAGTTGAGCTTTTATATTCGTGTCTGATAAGTCATTGAATTTCCAAACATAATATGGTTTTTGTAAGGTTTTATTTAACCCATTGATAATACTTTTATGACTTTAAAAGTTATGTCAAATCCACTGGAATTTT

mRNA sequence

ATGGCGCTCAACCTAACAAATTCCTTCCTTCAACGGCCAATTTCCACGGCCGTCGCACCGCCGAAGACTAAGGAATTTGGAACGAGAAGTCACCGGCCGGTGGTGACCTGCCGGAAAAAGGATCTGCACCCCCAATTTTACGAGGATGCGAAGGTTTATTGCAACGGAGAACTGGTGATGACGACGGGTGGGACCCAGAAAGAGTATTCGGTGGACGTGTGGTCGGGAAATCACCCGTTCTATTTGGGCAGCCGCTCCGCCCTGCTCGTCGACGCCGACCAGGTCGAGAAATTCCGCAAGAAATTCGGAGAGCTCTCGCAGTTGATGGAGATTCCTGTCCTGAAAGGAGAAATCGTGCTACCCACAAAACGCAAATCCGGCGGCAAAGGAAAGAAGAAGTAG

Coding sequence (CDS)

ATGGCGCTCAACCTAACAAATTCCTTCCTTCAACGGCCAATTTCCACGGCCGTCGCACCGCCGAAGACTAAGGAATTTGGAACGAGAAGTCACCGGCCGGTGGTGACCTGCCGGAAAAAGGATCTGCACCCCCAATTTTACGAGGATGCGAAGGTTTATTGCAACGGAGAACTGGTGATGACGACGGGTGGGACCCAGAAAGAGTATTCGGTGGACGTGTGGTCGGGAAATCACCCGTTCTATTTGGGCAGCCGCTCCGCCCTGCTCGTCGACGCCGACCAGGTCGAGAAATTCCGCAAGAAATTCGGAGAGCTCTCGCAGTTGATGGAGATTCCTGTCCTGAAAGGAGAAATCGTGCTACCCACAAAACGCAAATCCGGCGGCAAAGGAAAGAAGAAGTAG

Protein sequence

MALNLTNSFLQRPISTAVAPPKTKEFGTRSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
Homology
[Close]
BLAST of Spg007173 vs. NCBI nr
Match: XP_022936208.1 (50S ribosomal protein L31, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 260.0 bits (663), Expect = 1.1e-65
Identity = 127/133 (95.49%), Postives = 128/133 (96.24%), Query Frame = 0 

Query: 1   MALNLTNSFLQRPISTAVAPPKTKEFGTRSHRPVVTCRKKDLHPQFYEDAKVYCNGELVM 60
           MALNLTNSFLQRPIS  VAPPK KEFG RSHR VVTCRKKDLHPQF+EDAKVYCNGELVM
Sbjct: 1   MALNLTNSFLQRPISPVVAPPKKKEFGARSHRAVVTCRKKDLHPQFHEDAKVYCNGELVM 60

Query: 61  TTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEIVL 120
           TTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEIVL
Sbjct: 61  TTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEIVL 120

Query: 121 PTKRKSGGKGKKK 134
           PTKRKSGGKGKKK
Sbjct: 121 PTKRKSGGKGKKK 133

[Close]
BLAST of Spg007173 vs. NCBI nr
Match: XP_022975559.1 (50S ribosomal protein L31, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 259.6 bits (662), Expect = 1.5e-65
Identity = 126/133 (94.74%), Postives = 128/133 (96.24%), Query Frame = 0 

Query: 1   MALNLTNSFLQRPISTAVAPPKTKEFGTRSHRPVVTCRKKDLHPQFYEDAKVYCNGELVM 60
           MALNLTNSFLQRPIS  VAPPK KEFG RSHR VVTCRKKDLHPQF+EDAKVYCNGELVM
Sbjct: 1   MALNLTNSFLQRPISPVVAPPKKKEFGARSHRAVVTCRKKDLHPQFHEDAKVYCNGELVM 60

Query: 61  TTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEIVL 120
           TTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEI+L
Sbjct: 61  TTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEIIL 120

Query: 121 PTKRKSGGKGKKK 134
           PTKRKSGGKGKKK
Sbjct: 121 PTKRKSGGKGKKK 133

[Close]
BLAST of Spg007173 vs. NCBI nr
Match: XP_023535198.1 (50S ribosomal protein L31, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 258.1 bits (658), Expect = 4.3e-65
Identity = 126/133 (94.74%), Postives = 128/133 (96.24%), Query Frame = 0 

Query: 1   MALNLTNSFLQRPISTAVAPPKTKEFGTRSHRPVVTCRKKDLHPQFYEDAKVYCNGELVM 60
           MAL+LTNSFLQRPIS  VAPPK KEFG RSHR VVTCRKKDLHPQF+EDAKVYCNGELVM
Sbjct: 1   MALSLTNSFLQRPISPVVAPPKKKEFGARSHRAVVTCRKKDLHPQFHEDAKVYCNGELVM 60

Query: 61  TTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEIVL 120
           TTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEIVL
Sbjct: 61  TTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEIVL 120

Query: 121 PTKRKSGGKGKKK 134
           PTKRKSGGKGKKK
Sbjct: 121 PTKRKSGGKGKKK 133

[Close]
BLAST of Spg007173 vs. NCBI nr
Match: XP_023523361.1 (50S ribosomal protein L31, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 257.7 bits (657), Expect = 5.6e-65
Identity = 124/133 (93.23%), Postives = 127/133 (95.49%), Query Frame = 0 

Query: 1   MALNLTNSFLQRPISTAVAPPKTKEFGTRSHRPVVTCRKKDLHPQFYEDAKVYCNGELVM 60
           MALNLTNSFLQRP S A+APPK KE G R +RPVVTCRKKD+HPQFYEDAKVYCNGELVM
Sbjct: 48  MALNLTNSFLQRPFSPAIAPPKNKELGARRYRPVVTCRKKDIHPQFYEDAKVYCNGELVM 107

Query: 61  TTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEIVL 120
           TTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEIVL
Sbjct: 108 TTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEIVL 167

Query: 121 PTKRKSGGKGKKK 134
           PTKRKSGGKGKKK
Sbjct: 168 PTKRKSGGKGKKK 180

[Close]
BLAST of Spg007173 vs. NCBI nr
Match: KAG6608549.1 (50S ribosomal protein L31, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 257.7 bits (657), Expect = 5.6e-65
Identity = 124/133 (93.23%), Postives = 127/133 (95.49%), Query Frame = 0 

Query: 1   MALNLTNSFLQRPISTAVAPPKTKEFGTRSHRPVVTCRKKDLHPQFYEDAKVYCNGELVM 60
           MALNLTNSFLQRP S A+APPK KE G R +RPVVTCRKKD+HPQFYEDAKVYCNGELVM
Sbjct: 1   MALNLTNSFLQRPFSPAIAPPKNKELGARRYRPVVTCRKKDIHPQFYEDAKVYCNGELVM 60

Query: 61  TTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEIVL 120
           TTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEIVL
Sbjct: 61  TTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEIVL 120

Query: 121 PTKRKSGGKGKKK 134
           PTKRKSGGKGKKK
Sbjct: 121 PTKRKSGGKGKKK 133

[Close]
BLAST of Spg007173 vs. ExPASy Swiss-Prot
Match: Q9FWS4 (50S ribosomal protein L31, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL31 PE=2 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 2.7e-46
Identity = 92/144 (63.89%), Postives = 111/144 (77.08%), Query Frame = 0 

Query: 1   MALNLTNSFLQ-----------RPISTAVAPPKTKEFGTRSHRPVVTCRKKDLHPQFYED 60
           MA++L NSFLQ           +P+  AV   K     + +    +TCRKK+LHP+F+ED
Sbjct: 1   MAVSLPNSFLQISPCVPSLQLRKPVMAAVKGGKQSVRRSSNTVVQITCRKKELHPEFHED 60

Query: 61  AKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLM 120
           AKVYCNGELVMTTGGT+KEY VDVWSGNHPFYLG+RSAL+VDADQVEKFRK+F  LS++M
Sbjct: 61  AKVYCNGELVMTTGGTKKEYVVDVWSGNHPFYLGNRSALMVDADQVEKFRKRFAGLSEIM 120

Query: 121 EIPVLKGEIVLPTKRKSGGKGKKK 134
           EIPVLKGEI++PTK+  G KGKKK
Sbjct: 121 EIPVLKGEIIMPTKKSKGPKGKKK 144

[Close]
BLAST of Spg007173 vs. ExPASy Swiss-Prot
Match: P82249 (50S ribosomal protein L31, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL31 PE=1 SV=2)

HSP 1 Score: 179.9 bits (455), Expect = 1.9e-44
Identity = 91/135 (67.41%), Postives = 110/135 (81.48%), Query Frame = 0 

Query: 1   MALNLTNSFLQRPIST--AVAPPKTKEFGTRSHRPVVTCRKKDLHPQFYEDAKVYCNGEL 60
           M L L+N FL +  +T   +  PKT    + + RP  +CRK D+HP+F EDAKVYCNGEL
Sbjct: 1   MVLTLSNQFLAKIPATPKTLTLPKT---SSSTLRPQWSCRKSDIHPEFREDAKVYCNGEL 60

Query: 61  VMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEI 120
           VMTTGGTQK+Y+V+VWSGNHPFYLG+RSALL+DADQVEKFRKK+GEL+Q+MEIPVLKGEI
Sbjct: 61  VMTTGGTQKDYTVEVWSGNHPFYLGNRSALLLDADQVEKFRKKYGELTQIMEIPVLKGEI 120

Query: 121 VLPTKRKSGGKGKKK 134
           +LP K+KS  K KKK
Sbjct: 121 ILPPKKKS--KAKKK 130

[Close]
BLAST of Spg007173 vs. ExPASy Swiss-Prot
Match: Q7V9Y9 (50S ribosomal protein L31 OS=Prochlorococcus marinus (strain SARG / CCMP1375 / SS120) OX=167539 GN=rpmE PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 3.4e-17
Identity = 38/65 (58.46%), Postives = 50/65 (76.92%), Query Frame = 0 

Query: 39  KKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF 98
           KKD+HP +Y DAKV CNGE+VMTTG TQ E  VDVWSGNHPF+ G++  L  +  +V++F
Sbjct: 3   KKDIHPNWYPDAKVICNGEVVMTTGSTQPEIHVDVWSGNHPFFTGTQKILDTEG-RVDRF 62

Query: 99  RKKFG 104
            +K+G
Sbjct: 63  MRKYG 66

[Close]
BLAST of Spg007173 vs. ExPASy Swiss-Prot
Match: Q31L35 (50S ribosomal protein L31 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=rpmE PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 3.4e-17
Identity = 40/68 (58.82%), Postives = 52/68 (76.47%), Query Frame = 0 

Query: 39  KKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDAD-QVEK 98
           K D+HPQ+Y +AKVYCNGE VMT G TQ E  VDVWSGNHPFY G++   ++D + +VE+
Sbjct: 3   KADIHPQWYPEAKVYCNGEEVMTVGSTQPELHVDVWSGNHPFYTGTQK--IIDTEGRVER 62

Query: 99  FRKKFGEL 106
           F +K+G L
Sbjct: 63  FLRKYGML 68

[Close]
BLAST of Spg007173 vs. ExPASy Swiss-Prot
Match: Q5N0T7 (50S ribosomal protein L31 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=rpmE PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 3.4e-17
Identity = 40/68 (58.82%), Postives = 52/68 (76.47%), Query Frame = 0 

Query: 39  KKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDAD-QVEK 98
           K D+HPQ+Y +AKVYCNGE VMT G TQ E  VDVWSGNHPFY G++   ++D + +VE+
Sbjct: 3   KADIHPQWYPEAKVYCNGEEVMTVGSTQPELHVDVWSGNHPFYTGTQK--IIDTEGRVER 62

Query: 99  FRKKFGEL 106
           F +K+G L
Sbjct: 63  FLRKYGML 68

[Close]
BLAST of Spg007173 vs. ExPASy TrEMBL
Match: A0A6J1FCM8 (50S ribosomal protein L31 OS=Cucurbita moschata OX=3662 GN=LOC111442881 PE=3 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 5.4e-66
Identity = 127/133 (95.49%), Postives = 128/133 (96.24%), Query Frame = 0 

Query: 1   MALNLTNSFLQRPISTAVAPPKTKEFGTRSHRPVVTCRKKDLHPQFYEDAKVYCNGELVM 60
           MALNLTNSFLQRPIS  VAPPK KEFG RSHR VVTCRKKDLHPQF+EDAKVYCNGELVM
Sbjct: 1   MALNLTNSFLQRPISPVVAPPKKKEFGARSHRAVVTCRKKDLHPQFHEDAKVYCNGELVM 60

Query: 61  TTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEIVL 120
           TTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEIVL
Sbjct: 61  TTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEIVL 120

Query: 121 PTKRKSGGKGKKK 134
           PTKRKSGGKGKKK
Sbjct: 121 PTKRKSGGKGKKK 133

[Close]
BLAST of Spg007173 vs. ExPASy TrEMBL
Match: A0A6J1IKY2 (50S ribosomal protein L31 OS=Cucurbita maxima OX=3661 GN=LOC111475090 PE=3 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 7.1e-66
Identity = 126/133 (94.74%), Postives = 128/133 (96.24%), Query Frame = 0 

Query: 1   MALNLTNSFLQRPISTAVAPPKTKEFGTRSHRPVVTCRKKDLHPQFYEDAKVYCNGELVM 60
           MALNLTNSFLQRPIS  VAPPK KEFG RSHR VVTCRKKDLHPQF+EDAKVYCNGELVM
Sbjct: 1   MALNLTNSFLQRPISPVVAPPKKKEFGARSHRAVVTCRKKDLHPQFHEDAKVYCNGELVM 60

Query: 61  TTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEIVL 120
           TTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEI+L
Sbjct: 61  TTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEIIL 120

Query: 121 PTKRKSGGKGKKK 134
           PTKRKSGGKGKKK
Sbjct: 121 PTKRKSGGKGKKK 133

[Close]
BLAST of Spg007173 vs. ExPASy TrEMBL
Match: A0A6J1FQS6 (50S ribosomal protein L31 OS=Cucurbita moschata OX=3662 GN=LOC111446395 PE=3 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.3e-64
Identity = 123/133 (92.48%), Postives = 126/133 (94.74%), Query Frame = 0 

Query: 1   MALNLTNSFLQRPISTAVAPPKTKEFGTRSHRPVVTCRKKDLHPQFYEDAKVYCNGELVM 60
           MALNLTNSFLQRP S A+APPK KE G R +R VVTCRKKD+HPQFYEDAKVYCNGELVM
Sbjct: 1   MALNLTNSFLQRPFSPAIAPPKNKELGARRYRAVVTCRKKDIHPQFYEDAKVYCNGELVM 60

Query: 61  TTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEIVL 120
           TTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEIVL
Sbjct: 61  TTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEIVL 120

Query: 121 PTKRKSGGKGKKK 134
           PTKRKSGGKGKKK
Sbjct: 121 PTKRKSGGKGKKK 133

[Close]
BLAST of Spg007173 vs. ExPASy TrEMBL
Match: A0A6J1J0F9 (50S ribosomal protein L31, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111480796 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 3.0e-64
Identity = 123/133 (92.48%), Postives = 126/133 (94.74%), Query Frame = 0 

Query: 1   MALNLTNSFLQRPISTAVAPPKTKEFGTRSHRPVVTCRKKDLHPQFYEDAKVYCNGELVM 60
           MALNLTNSFLQR  S A+APPK KE G R +RPVVTCRKKD+HPQFYEDAKVYCNGELVM
Sbjct: 42  MALNLTNSFLQRSFSPAIAPPKNKELGARRYRPVVTCRKKDVHPQFYEDAKVYCNGELVM 101

Query: 61  TTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEIVL 120
           TTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEIVL
Sbjct: 102 TTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEIVL 161

Query: 121 PTKRKSGGKGKKK 134
           PTKRKSGGKGKKK
Sbjct: 162 PTKRKSGGKGKKK 174

[Close]
BLAST of Spg007173 vs. ExPASy TrEMBL
Match: A0A6J1C3Q3 (50S ribosomal protein L31, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111008063 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 5.6e-63
Identity = 123/131 (93.89%), Postives = 125/131 (95.42%), Query Frame = 0 

Query: 3   LNLTNSFLQRPISTAVAPPKTKEFGTRSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTT 62
           LNLTNSFLQR I  AVAP K KEFG RSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTT
Sbjct: 34  LNLTNSFLQRRIPPAVAPAK-KEFGARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTT 93

Query: 63  GGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEIVLPT 122
           GGTQKEYSVDVWSGNHPFYLGSRSALL+DADQVEKFRKKFGELSQLMEIPVLKGEI+LPT
Sbjct: 94  GGTQKEYSVDVWSGNHPFYLGSRSALLIDADQVEKFRKKFGELSQLMEIPVLKGEIILPT 153

Query: 123 KRKSGGKGKKK 134
           KRKSGGKGKKK
Sbjct: 154 KRKSGGKGKKK 163

[Close]
BLAST of Spg007173 vs. TAIR 10
Match: AT1G75350.1 (Ribosomal protein L31 )

HSP 1 Score: 186.0 bits (471), Expect = 1.9e-47
Identity = 92/144 (63.89%), Postives = 111/144 (77.08%), Query Frame = 0 

Query: 1   MALNLTNSFLQ-----------RPISTAVAPPKTKEFGTRSHRPVVTCRKKDLHPQFYED 60
           MA++L NSFLQ           +P+  AV   K     + +    +TCRKK+LHP+F+ED
Sbjct: 1   MAVSLPNSFLQISPCVPSLQLRKPVMAAVKGGKQSVRRSSNTVVQITCRKKELHPEFHED 60

Query: 61  AKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLM 120
           AKVYCNGELVMTTGGT+KEY VDVWSGNHPFYLG+RSAL+VDADQVEKFRK+F  LS++M
Sbjct: 61  AKVYCNGELVMTTGGTKKEYVVDVWSGNHPFYLGNRSALMVDADQVEKFRKRFAGLSEIM 120

Query: 121 EIPVLKGEIVLPTKRKSGGKGKKK 134
           EIPVLKGEI++PTK+  G KGKKK
Sbjct: 121 EIPVLKGEIIMPTKKSKGPKGKKK 144

The following BLAST results are available for this feature:
BLAST of Spg007173 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022936208.11.1e-6595.4950S ribosomal protein L31, chloroplastic-like [Cucurbita moschata][more]
XP_022975559.11.5e-6594.7450S ribosomal protein L31, chloroplastic-like [Cucurbita maxima][more]
XP_023535198.14.3e-6594.7450S ribosomal protein L31, chloroplastic [Cucurbita pepo subsp. pepo][more]
XP_023523361.15.6e-6593.2350S ribosomal protein L31, chloroplastic-like [Cucurbita pepo subsp. pepo][more]
KAG6608549.15.6e-6593.2350S ribosomal protein L31, chloroplastic, partial [Cucurbita argyrosperma subsp.... [more]
BLAST of Spg007173 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FWS42.7e-4663.8950S ribosomal protein L31, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL3... [more]
P822491.9e-4467.4150S ribosomal protein L31, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL31 P... [more]
Q7V9Y93.4e-1758.4650S ribosomal protein L31 OS=Prochlorococcus marinus (strain SARG / CCMP1375 / S... [more]
Q31L353.4e-1758.8250S ribosomal protein L31 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-80... [more]
Q5N0T73.4e-1758.8250S ribosomal protein L31 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / S... [more]
BLAST of Spg007173 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FCM85.4e-6695.4950S ribosomal protein L31 OS=Cucurbita moschata OX=3662 GN=LOC111442881 PE=3 SV=... [more]
A0A6J1IKY27.1e-6694.7450S ribosomal protein L31 OS=Cucurbita maxima OX=3661 GN=LOC111475090 PE=3 SV=1[more]
A0A6J1FQS62.3e-6492.4850S ribosomal protein L31 OS=Cucurbita moschata OX=3662 GN=LOC111446395 PE=3 SV=... [more]
A0A6J1J0F93.0e-6492.4850S ribosomal protein L31, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11148... [more]
A0A6J1C3Q35.6e-6393.8950S ribosomal protein L31, chloroplastic OS=Momordica charantia OX=3673 GN=LOC11... [more]
BLAST of Spg007173 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G75350.11.9e-4763.89Ribosomal protein L31 [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002150Ribosomal protein L31PRINTSPR01249RIBOSOMALL31coord: 68..83
score: 49.69
coord: 39..56
score: 33.33
IPR002150Ribosomal protein L31TIGRFAMTIGR00105TIGR00105coord: 39..104
e-value: 3.2E-15
score: 54.0
IPR002150Ribosomal protein L31PFAMPF01197Ribosomal_L31coord: 39..103
e-value: 7.2E-17
score: 61.3
IPR002150Ribosomal protein L31PANTHERPTHR3328050S RIBOSOMAL PROTEIN L31, CHLOROPLASTICcoord: 31..133
IPR042105Ribosomal protein L31 superfamilyGENE3D4.10.830.30Ribosomal protein L31coord: 39..106
e-value: 2.2E-17
score: 64.9
NoneNo IPR availablePANTHERPTHR33280:SF550S RIBOSOMAL PROTEIN L31coord: 31..133
IPR034704L28p-likeSUPERFAMILY143800L28p-likecoord: 39..105

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg007173.1Spg007173.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome