
Spg007149 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACGAGACTCAAGAGTAGAAGACAAAGGCAACCCAAGGCAACGGCTTTAAAATGGTAAAATTGAAAACATTGTTTTGTATCTGGACAGGGTTAGACCTCGCTTATCTCCTTCGCTGCTAACAATGAAGGCAACCCTGAAGACTAAGTACGACGCAGACAAAAGCGGCGCCGCCTCCACTTTGGCTGTTAACGCCGGCGATGTCAAGCTCCGAGCTTCAATCACCGACGCTACAATCATCAACGGCCCTAGCTTAAATGGCCTTTCTCTTGCCGTCGAGAAACCCGGCTTCTTCATAGTCGATTACAATGTCCCTAGAAAGGTACGCCGACTGCTCCAATTTGCAGATTCGAATAGCTTTTTGATGACTGCGAATTGAGAGGAAATAATTTCATGAAGTGAAACATATTGGTAGGGGTGGAATTTAACTGTTGTCTATTTGACCTACCAGTCTGAACCATCTGCTTCAATCTGCTATGAATTTGACACCGGAAATCACATAAATTGGAGCATTTAATTGTTTGCGCTCTACCTGAAATTGATTCGTTGTACTGCTGAATTTAATTTGATTTTTCTGCTGGAAGACCGAGTTAGGTTTCTCTAGAATTCATTTTTCCCCTTCGAATTATCAAATTCAATCTTGTACTAAACTGTTTTGTTATTGCATGTATGGTACAGGATCTTCGCTTTCAGTTTATGAATACTGTCAAGGTAGCGCAGAAGCCTTTGAATTTGACTTACATCCATAGTAGGGGCGATAACAGAACGATTCTCGATGGGACCCTAGTCTTTGATTCGGCTAACAAGGTCTCTGCCAATCACGTTCTTGGCTCCGGAAATTGTAAATTGAAGTACACCTACGTGCACGAGGGGGCGACCACTTTTGAGCCTTCTTACGATGTTGCAAAGAATTCGTGGGACTTCTCTGTTTCAAGGAAGGTTTATGGTGATGATGTATTCAAGGCAACATACCAGACTACAACCAAGGCACTGGGATTAGAATGGACAAGGAATTTGAAGTCAAGCGGAAATGTCAAGGTAGGTGATTTTGTCATTATATTTATATAAAATTTTGAATGCTTGTTAATCGAGTAGTTCAGAATCTCTAGATATGATTAGTCACTCAAAACAAGGAAGCTGATGTTTTGAGTACTTTTCAGGACAGGACAGTCTCTTCTAATTAAACCACTATTGAGGAGTTTGATATAATGTAATTATATCGAACCATGCCTGTGAAGTGCACATCTTTTGTGCAGTTAAAATGGAATTGAAATCTGGCTGTCTAATATTTTCAGAACACATTCTACTTACAATAATCCTTATGCAGTTGGCCTAACAGTAAACACATATTTTGGAAGTTCCGACGGCCAAACAGTCTATGAATCTTTTTTAGGTCAGAGTGTAAACTCAAACATTTATTATCCAGTAAATCATATTATTCAATAATCATTATCAAGTAATTAGAGGTACTTGGACCCTCCCTTTCTTGAGATCAGTCAAGTCTGAACCAACTGAAACAATGCATATGCATATGCATACCTTCATCCTTTCTTACCCAATCTATCTGCACAACAACTTTTCTAACTCATTACTATTATATCTTTGATACTCGAATAATATTCCTAATTTCTATCTTAGTAGCATCCCTATCATAAAGGATTAGGACATTTGAGCGGAAGTTATCTGGATTCATGGATTTGAGCCTCCAGACAGAAAGCTTTAATAAATTAAAACTTTTATGTCTCCTAGAGCCAATGTTAGGGCACTCAAAATCTCCCTATGGATTGGTGGGAGTAGACCCCGATACTATGATTCTGAAGAGAATGGAAGGTAGATTTCCTTGCCGGAAATTGACAACCGGGGAGTTATATGAGAATCTTTTGAATTATTCCTTAAAATAGTAAGTAGTCTGAAATAAACATATGGTTAGTTATTCCCCTGAACCTTAAAAAGAAAAAAAACCCTTGGATTGTATTTTCACCCTGGTGTCAACATATGAAAATGAGACACAGGGTTTCCAAGAGGATTACTTGATTTTCTACTGAGTCTCTGGTAATCTGATGTTTGATGACAGTTTTTTTAGAAATACATTTTTGTTTGGTTTGTGGTGAGTATTATCAGGACTTTGTCATCTTATCTTTGAAAACTCTCCCTCTCCCACGTGGGGGGTTTGAGGAAATTCAGGACATATTTATTAGTCTGGGCCATGCACAAGTGCAGGATACAAAAATAAACAGTATAGTAGTAAGCGTCTTTGAGTTAGGCTCTGCATTTAAAAAATTGTTAACCATTACTTGGTTTTGAAGTAGTTAATAGACTGATAGTTGAGGGAGTCTCACAATGCAGTTTGGAGTAATCTATTGAGATGGAACGCTTTCTTTACCGGCAGTTGCAAGAGAAGGGTCCAACGTACATTTTTTTCAACAGTACTAGGGAGTTTTAAACACAGAAAATTTTGGAAAATGTTTTAGGTTGGTGAAAGTGTTTCCATAGGATTTCATAACTAGGTCACACGCTATAAGAAGCGTTGTCAATGCATTGACATTGAGCAGTTGAGAAAAGGGCAAAATACCCGCAGGCTTGAAGTGGTGGTTCCAGGCTGAGGTTCTGGCAGTAGTGATCTTGGAAACTGCTACGTATTCTCAGTAGAACTGGTTTTGTTTACTCTTTGTTTACTCGAGCTCGATAGCAGCCTTCAATTTTAAGTTGTAGATGCTTTTACTCGATTCAAAGCCTCTTTTGAAACGAAACAATATGATAATGCAGACTTTCATGTGAGTTCTTTTAACCAATCTTTTGTTGTGCAGATTGTAGCATCAGTCAATCTGGCAGATGAATTAAAAAGGCCAAAAGTAACCGCGGAGTCGACGTGGAACTTTGAAGTGTAATTTTTAAACCAATCTTTCCCTTAAATTCCTCTTTGTGATTTATTGTGGACATGGAGTTTCCTAAATACATTGATGATTGAATCTGATAATTTAAGTACCATTGTAGGAAAAACCTCAATAATCATAAGAAGCGTTTTTGTTTTAAAAAAAAAGTGTGACTGTCACTTCCATTTTGCTCATGCTCTGC ATGAAGGCAACCCTGAAGACTAAGTACGACGCAGACAAAAGCGGCGCCGCCTCCACTTTGGCTGTTAACGCCGGCGATGTCAAGCTCCGAGCTTCAATCACCGACGCTACAATCATCAACGGCCCTAGCTTAAATGGCCTTTCTCTTGCCGTCGAGAAACCCGGCTTCTTCATAGTCGATTACAATGTCCCTAGAAAGGATCTTCGCTTTCAGTTTATGAATACTGTCAAGGTAGCGCAGAAGCCTTTGAATTTGACTTACATCCATAGTAGGGGCGATAACAGAACGATTCTCGATGGGACCCTAGTCTTTGATTCGGCTAACAAGGTCTCTGCCAATCACGTTCTTGGCTCCGGAAATTGTAAATTGAAGTACACCTACGTGCACGAGGGGGCGACCACTTTTGAGCCTTCTTACGATGTTGCAAAGAATTCGTGGGACTTCTCTGTTTCAAGGAAGGTTTATGGTGATGATGTATTCAAGGCAACATACCAGACTACAACCAAGGCACTGGGATTAGAATGGACAAGGAATTTGAAGTCAAGCGGAAATGTCAAGATTGTAGCATCAGTCAATCTGGCAGATGAATTAAAAAGGCCAAAAGTAACCGCGGAGTCGACGTGGAACTTTGAAGTGTAA ATGAAGGCAACCCTGAAGACTAAGTACGACGCAGACAAAAGCGGCGCCGCCTCCACTTTGGCTGTTAACGCCGGCGATGTCAAGCTCCGAGCTTCAATCACCGACGCTACAATCATCAACGGCCCTAGCTTAAATGGCCTTTCTCTTGCCGTCGAGAAACCCGGCTTCTTCATAGTCGATTACAATGTCCCTAGAAAGGATCTTCGCTTTCAGTTTATGAATACTGTCAAGGTAGCGCAGAAGCCTTTGAATTTGACTTACATCCATAGTAGGGGCGATAACAGAACGATTCTCGATGGGACCCTAGTCTTTGATTCGGCTAACAAGGTCTCTGCCAATCACGTTCTTGGCTCCGGAAATTGTAAATTGAAGTACACCTACGTGCACGAGGGGGCGACCACTTTTGAGCCTTCTTACGATGTTGCAAAGAATTCGTGGGACTTCTCTGTTTCAAGGAAGGTTTATGGTGATGATGTATTCAAGGCAACATACCAGACTACAACCAAGGCACTGGGATTAGAATGGACAAGGAATTTGAAGTCAAGCGGAAATGTCAAGATTGTAGCATCAGTCAATCTGGCAGATGAATTAAAAAGGCCAAAAGTAACCGCGGAGTCGACGTGGAACTTTGAAGTGTAA MKATLKTKYDADKSGAASTLAVNAGDVKLRASITDATIINGPSLNGLSLAVEKPGFFIVDYNVPRKDLRFQFMNTVKVAQKPLNLTYIHSRGDNRTILDGTLVFDSANKVSANHVLGSGNCKLKYTYVHEGATTFEPSYDVAKNSWDFSVSRKVYGDDVFKATYQTTTKALGLEWTRNLKSSGNVKIVASVNLADELKRPKVTAESTWNFEV Homology
BLAST of Spg007149 vs. NCBI nr
Match: XP_022140191.1 (outer envelope pore protein 24A, chloroplastic-like [Momordica charantia]) HSP 1 Score: 409.1 bits (1050), Expect = 2.4e-110 Identity = 203/212 (95.75%), Postives = 208/212 (98.11%), Query Frame = 0
BLAST of Spg007149 vs. NCBI nr
Match: XP_038903165.1 (outer envelope pore protein 24, chloroplastic [Benincasa hispida]) HSP 1 Score: 402.9 bits (1034), Expect = 1.7e-108 Identity = 200/212 (94.34%), Postives = 206/212 (97.17%), Query Frame = 0
BLAST of Spg007149 vs. NCBI nr
Match: XP_008466586.1 (PREDICTED: outer envelope pore protein 24, chloroplastic-like [Cucumis melo] >TYK19617.1 outer envelope pore protein 24 [Cucumis melo var. makuwa]) HSP 1 Score: 401.7 bits (1031), Expect = 3.8e-108 Identity = 198/212 (93.40%), Postives = 206/212 (97.17%), Query Frame = 0
BLAST of Spg007149 vs. NCBI nr
Match: XP_004147789.1 (outer envelope pore protein 24, chloroplastic [Cucumis sativus] >KGN59946.1 hypothetical protein Csa_001150 [Cucumis sativus]) HSP 1 Score: 399.8 bits (1026), Expect = 1.4e-107 Identity = 197/212 (92.92%), Postives = 206/212 (97.17%), Query Frame = 0
BLAST of Spg007149 vs. NCBI nr
Match: XP_023525922.1 (outer envelope pore protein 24, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 393.7 bits (1010), Expect = 1.0e-105 Identity = 193/212 (91.04%), Postives = 200/212 (94.34%), Query Frame = 0
BLAST of Spg007149 vs. ExPASy Swiss-Prot
Match: Q1H5C9 (Outer envelope pore protein 24A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP24A PE=1 SV=1) HSP 1 Score: 313.2 bits (801), Expect = 2.3e-84 Identity = 143/212 (67.45%), Postives = 181/212 (85.38%), Query Frame = 0
BLAST of Spg007149 vs. ExPASy Swiss-Prot
Match: O49929 (Outer envelope pore protein 24, chloroplastic OS=Pisum sativum OX=3888 GN=OEP24 PE=1 SV=1) HSP 1 Score: 310.1 bits (793), Expect = 2.0e-83 Identity = 155/213 (72.77%), Postives = 178/213 (83.57%), Query Frame = 0
BLAST of Spg007149 vs. ExPASy Swiss-Prot
Match: Q8H0Y1 (Outer envelope pore protein 24B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP24B PE=2 SV=1) HSP 1 Score: 309.7 bits (792), Expect = 2.6e-83 Identity = 144/212 (67.92%), Postives = 182/212 (85.85%), Query Frame = 0
BLAST of Spg007149 vs. ExPASy Swiss-Prot
Match: B8ANR3 (Outer envelope pore protein 24, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=OEP24 PE=3 SV=1) HSP 1 Score: 220.3 bits (560), Expect = 2.1e-56 Identity = 110/224 (49.11%), Postives = 152/224 (67.86%), Query Frame = 0
BLAST of Spg007149 vs. ExPASy Swiss-Prot
Match: Q75IQ4 (Outer envelope pore protein 24, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=OEP24 PE=2 SV=1) HSP 1 Score: 218.4 bits (555), Expect = 7.8e-56 Identity = 110/224 (49.11%), Postives = 151/224 (67.41%), Query Frame = 0
BLAST of Spg007149 vs. ExPASy TrEMBL
Match: A0A6J1CF95 (outer envelope pore protein 24A, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111010917 PE=4 SV=1) HSP 1 Score: 409.1 bits (1050), Expect = 1.2e-110 Identity = 203/212 (95.75%), Postives = 208/212 (98.11%), Query Frame = 0
BLAST of Spg007149 vs. ExPASy TrEMBL
Match: A0A5D3D7T8 (Outer envelope pore protein 24 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G00030 PE=4 SV=1) HSP 1 Score: 401.7 bits (1031), Expect = 1.8e-108 Identity = 198/212 (93.40%), Postives = 206/212 (97.17%), Query Frame = 0
BLAST of Spg007149 vs. ExPASy TrEMBL
Match: A0A1S3CRS8 (outer envelope pore protein 24, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103503959 PE=4 SV=1) HSP 1 Score: 401.7 bits (1031), Expect = 1.8e-108 Identity = 198/212 (93.40%), Postives = 206/212 (97.17%), Query Frame = 0
BLAST of Spg007149 vs. ExPASy TrEMBL
Match: A0A0A0LIV8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G855400 PE=4 SV=1) HSP 1 Score: 399.8 bits (1026), Expect = 7.0e-108 Identity = 197/212 (92.92%), Postives = 206/212 (97.17%), Query Frame = 0
BLAST of Spg007149 vs. ExPASy TrEMBL
Match: A0A6J1J3S8 (outer envelope pore protein 24, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111481014 PE=4 SV=1) HSP 1 Score: 391.7 bits (1005), Expect = 1.9e-105 Identity = 192/212 (90.57%), Postives = 200/212 (94.34%), Query Frame = 0
BLAST of Spg007149 vs. TAIR 10
Match: AT1G45170.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42960.1); Has 62 Blast hits to 62 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 313.2 bits (801), Expect = 1.7e-85 Identity = 143/212 (67.45%), Postives = 181/212 (85.38%), Query Frame = 0
BLAST of Spg007149 vs. TAIR 10
Match: AT5G42960.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, plastid, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G45170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 309.7 bits (792), Expect = 1.8e-84 Identity = 144/212 (67.92%), Postives = 182/212 (85.85%), Query Frame = 0
BLAST of Spg007149 vs. TAIR 10
Match: AT1G45170.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42960.1); Has 60 Blast hits to 60 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 222.2 bits (565), Expect = 3.8e-58 Identity = 112/212 (52.83%), Postives = 145/212 (68.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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