Spg007021 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg007021
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	protein LTV1 homolog
Location	scaffold9: 46942155 .. 46947617 (+)
RNA-Seq Expression	Spg007021
Synteny	Spg007021

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAGGAAGAAGAAGTTCTTCGACAAGAAGAAATCCGCAACTTTCCAATTACTCGCTCGTGACTCGTCCGATCCCAATTATGATGGAACTGCCGCCACCGACCGTGTTTTTGTTCGTGTCGACAACCACTCTTATACTCTCCCTGTCTTCGATGATGGCCCTATCGATGCTTCAGGTTCTGCCTGCTTTGATGAAGATCCTAACTCGATCTTTGCCGACGCTCCTGATGATTACGATGATGAAGAGAATGGAGGTTTTGGGACTTCTATGCGGTCTCGTGGGGAAGTTGGTGGGCCGGCGTCGTTACCGGAAAATGTTAGAAGGGAAATTTTGGAGCTAGGATTTCCTGACGATGGCTACAATTATTTGCTGCACCTTAGGGAGATTAAGAATACTGGTGGCGGTTCGGCGTTTTATCAGAACCCCAAGGCTAAGTTGGATCAGCTTCCACGCGATGAGAAGGTTGGTTGTTTTGTTTTAATGTTTTCTGGCATTGGGATTTTAACCGTATTCATAATGGTTCATCATGTGGATTAGATACACAAGTGAGGTTATTCAGCATCATACAATGCTAACCTAGTTCTGAAAATAAGCGACGGTTTAGAAAGCTATTGTTTTTGTCTCTAAATCAGCGCTTTTACCTTCTCGTACGATAACGTTTCTTTGATCGTTTTGTAGGCGTATGATGCCTCCAGAGTGCTTGTTTCTAAAGGGAACATTGATGCCGATGAGAACGCCATCTACAAAGTTGCGTCCAAGACTGTTGGAGTCAGGGTTCAAAATGCAATTGACCCTGAAATAGCTACATTGCTTGATGAAGATGATTTATCACGATTTGGTTCTGATGTTGAGGACTTAGAAGAAGACTTCGTAGTTCAGGCAAACTTATGCGAAGAAGGGGAGGATGATACAATGGATAATAAGTTTAGTGTGGCTGAGGATTCTGCTAGAACGGCAGGAAGCCATGATATTGTTAGTAACAAATCTTTTGGTGACCACATTTTTGAGGATGCAGACATGGACCATGTGGAAGAAGAAAGCGAGAATAGTGATGTTGATAAGCCACGAACTCGTCGGCTATTGGATGATCAATTTGACACGGTGAGTTCTCAATACTTTTTATGCATTGCAGTTCTGTAGAGTTTTTGTACTCAAATCCTGTGATTATTAACATGTTCCCGTAGGTAGGAAGTTTATATCTATTTTTGGTATCATATTGAAATTTATCTGGTTGGGCTGAAATGTTAGACTTCAGGATTCTCTTGGTGGTTGGTTCAGAGTTTCAATTCTTGCAAAATTGATGAAGGCTTTATGTTTGACCTTTTCAGATGGTGGTTTGATTGTCTGTGCTTACCTAAAGTATATACCCTCAAATTTACTAATACTGAAATTTTAATTTGAATTTTCAGTGGAAGTAAGACTGGATTAATAATGTAGGAACTTTTAGGTGTTGACCTAGACTTCAATAGTTTGATATCCAAGAATCAGTGTTATCCAAAGAATTGGCTCATTTTTTTTGCTTCATGGGTATAAATAATGGTTTCTCCCTTTTTTCCCCTTCCAAGAGGTGCCTTTGTGGTAAGGGTGTGTGATGTTTGGAAGACACCCTCCACTTTCAAGGTTCAAGGCCCCAGGTTGAGAACTTCATAACTGAACACCCTTGTTGGATGTAGCCTTAGTGTGGGCAAAACCCTCTTTAGAATTAACGAGACGGCTACAATACAAGCATAATGTGAGGAGTAGAGCCTCCAATATCCTGGCTAAAAAATGAGAATAATTCTTTCTTTTTTGGATATATAATTGTTGAATTACCAGTTCCTGGAACGTGATTTCAGAGGATTGTCTCTGCTGATATATTTTCCGTGTACTAGATTTCAAATCTCAGTAGCATATCTGTCGTGTTAGATTTCTACATGTGCTTGAATATTTCCAATTAGTTTTGTGGTTTTATTTGATGGAAAATAAATATGTGTGTTGATTACTTATTTATCTATCTTTGAAATTTTTCCTACAATTTGTTTACTATCTAGATTAAGCCTAATGAGTTTTTCGCCTAAAACTTCTGTTTTAGGACATGAACTACTGAGAGATCTCTTGGTGAATGAATTACCTGAGTTCTTGACATCAGATTCTGTTGCATGTCAGTCATTCATTGGGCTAGTAGGCAATAAAGCAATAATGAATTACCTGAGGCAATGTGATAGTGTGAGATCCAGCTATATTTTACTTTTTCTGTAAATGGTTATGGTTAGGGAGGGTTGGAACTTGGAAGCCTCTTGAATGCTTTCAGGAGTAAACCTTTTTTGAAACATTTTTTCATCTAAATGATTTTGAGGCACTGAGTCATTGGACCTATCATTCCCTTTTCTTCACGTGCTTGAGATATTTGTTCTCTTTCCTTCCAACATTTTTCTGTGAGGATTTTATATTTACCTAACAATTTATGATGATTGCAGCTCTTAAGCCGGGACTACGCATCTAGTGACAATGATGGCAGTGGTTGTGATGAACATGATGGTTGTGTAGCTGAAGAAGATGAATCCCTTGCTCAGAAGCTCAAGCACGCCCTTGGTGATCATAATAAGGATGATTTGGAACTTGACCAAGGATATAAGGCTCCTGCAGACATATTGATTGGTAAAGAAGGATCAGAAGATAAAGAGCTTCTGCAGTCTGCCAGTGATGTAATTCACCGGTGTATGGAATATGCTGAGAAATATCAAAATGAAGACGATGACATTGAAGATGAATTTATATTTGAGGAGAGCAGTGATGAATCTGAAGTTTGGGACTGCGAAACTATTGTTTCTACTTGTTCTAATCTCAATAATCACCCTGGGAAGATCATAGCTCCTGAAATAACCAGAAGGAAGAAGTTGGCTGAAACTGTCTCTGGAGCCCTTAATTCCAATAATCCTGTGATAACTCTGAGGGGGAAAGAGAAGCTGCCAGTGGACTTTCTACCTCATGGTCGAAAAATTGTTGACAAAGTAAAAGATATTGGCAGCCTGAGAACTGAACATCAGAAGAGGAAGCCACATGGTCAGGAGTCGAAGGAAGAGAAGAAGGAGAGAAAGGTAGTTAACTAAGTTTACCTTCTACAGCTTAGTTTTGTGTTTTAGTTCATCCACGGGGTCTTCAAAAGTTTAGAGATATTTTAGTATTTTAGTAGAAATCGTTGTGCTACTTTTATAAGTGGCCTGTGCATCTAATGTTATTTGATGATGACTTCTTAATCCATGCAGGCTGCTATCAAGGAAGCACGACGTGAAGCACGGCGCACAAAAAAAGAAATGAAGGGGCTTTACAAGGGGGAAGCTCATCGTGCTCAGAAAGCAGTTGCTGTTTCTGGTCCAGCATCTATTCATCTTATGTAAGATACCAACCAAAAATTGTTTCAGAATTTTTTATTGGTATGTCTAAAGATGTAATGAAACTTCTCTCTGTTTGATTATCTATTAGTTTTTGCTGCTTGTTGACGAGAAAGGAAAAACTGAAAAACCAATAGCTGATTTAGAGTAATTTTGTTCTCTTTACTCGTTATCCTCTATATAGTATATCTCATCTCTGATGTTTATTATAAAAATATGATTGTAGACAACTCTTGGTCTTTGAACAAAAAGAGGGTCTATCTATTAGTATACCTTCACAAGCCAATTGGCAGGAGACGGTTCATATATTTATTATTTTTATTAATTTCTATGTAAAGCTGAAGATGAATAATGAGATTGTAATTTCTTATATTGGTTACCTACATTCATATTGTTTACAGCTTAATATGGTTTTTCGAATGATATGGCCTAGTGAATCTAGCTAATAATTTATTAAACGATCCACTTGTCTAGTGCCAGGCTACGGATTTTGCTCAAAGGAACTATAAACTTCAATTGACTAATGTTTAACTGCAAACATCACTGTTGTTCACCATGATGATCATAAATATTTCATTTCAGGTGAGAGTGAGCTTCTTGATGCGGATAATCGAACATTTTTTTATTCGTGACAAAGATCGAAGTGCTGGGGAGAAGTTTGCGAAACAACACTTGTATAGAACGAAGTAGCCAATGTTCAGAGAAAGGAGAGGAAAACAAGAAAAGGGACAATATCTTCAACGATTCCTTGATATCCGCCACATACCTGCTCAATGGATCTAATTCTTTATATGTTTAGTCTAGAGAGAGCGTCTGTAACACATCTGGAGATGTTCCAATGATAGCATATTTATTAAAACTGAAGTCAGTTACTTCAACTTGCGTATCTTTTCTTGGACAATGAATAGTTGAACTCACGAGTCGTCAAGACAATCGTGTATTTTTATTTCCTTCTATAGCAATTTAAGTTAAAGTGATGACAGTTCTTTTTTGAATAAATCTATTTAGTGTGTTCCTTATGCGTCAGCGCATTATTCAAATGTGCAACCTTTTTACAGGTCCTCAACGCTTGGACCATTGAAGCAATCTTTTCTTTTTTCAGCCCGCTCCGTCTCTCAGTCTAGAGGGGAGGAGAAGCTCTGAGAAAAAGGTAACCATTCAACTCAAAACTACGAAAAGTTCATATCTTATATCTTAGGATTACTCTCAGAGTACATTTTACAATTGCAATTTCTATTCTCTTAGCAATTGAAAACAACAGTTTGTTTAATAATATTGTAATGTGTGTTGCCAATTGTAAAGGATTATACAATGAAAACTATATGTAGTTAATTGTTATCTGAAGGGTATGTGTATTACTGTAGCATCACACAGGAACTAACCCCTCGATGTTTCAGGATCATTCTCTTCGACTTAATGTGGAATGGGGCCTGCATCTCCTCCCCCAAAATAGGGGTTCGGACTCCAGTAGCCGTAGTCGTCTGCCACAATTTCTGACTGAACCTTGAAACGTCTGTGGTCTCCCTTCACCTGAGATTCATGGTTGCCATTAGTTGTCAAAGGTGTAGCTGATAATGGCGAGAATGAATGTGATGCTGCAGCTGTTTCAGACATCGCCGTAATTATAGCAAACATCATTACGCCAAAGAATAAGGTGCGAATAATAACCGAGGCAAGGGTCGCTGCTGCCATGCTATATCTGTGTAGTATCTAACTCCCTGCAATTCAAGGTTGGTGTTTCTTGTGACGCATACTTTATTCAAGTCTTTAATTTCCAAGGCAATGGAGGGTCCTAATTTATGAGAAGTTGGACTGAGCTAAGGGCTGCATCAAATCAAAGCATAAGCAGTGTTTGAATTAAATCAAATTGAATTTTCCTGTCATACGGGGTGGATGACATATCATGTTTCTTTCATGCATATGGTGTTTTATTAAAATGGTATGCCTAGGATGTCTCGTTCTCGACGATACAATAAACTATCTAAGCTATCGGAGAAAACATAAAGATTGACAAATGTAAGGTGGACACTTGAAATATTAAAATTTTATGTTTTTCAACTAAATGGAGCAAAAAGAAGAAAAATAAATC

mRNA sequence

ATGGGGAGGAAGAAGAAGTTCTTCGACAAGAAGAAATCCGCAACTTTCCAATTACTCGCTCGTGACTCGTCCGATCCCAATTATGATGGAACTGCCGCCACCGACCGTGTTTTTGTTCGTGTCGACAACCACTCTTATACTCTCCCTGTCTTCGATGATGGCCCTATCGATGCTTCAGGTTCTGCCTGCTTTGATGAAGATCCTAACTCGATCTTTGCCGACGCTCCTGATGATTACGATGATGAAGAGAATGGAGGTTTTGGGACTTCTATGCGGTCTCGTGGGGAAGTTGGTGGGCCGGCGTCGTTACCGGAAAATGTTAGAAGGGAAATTTTGGAGCTAGGATTTCCTGACGATGGCTACAATTATTTGCTGCACCTTAGGGAGATTAAGAATACTGGTGGCGGTTCGGCGTTTTATCAGAACCCCAAGGCTAAGTTGGATCAGCTTCCACGCGATGAGAAGGTTGGTTGTTTTGTTTTAATGTTTTCTGGCATTGGGATTTTAACCGCGTATGATGCCTCCAGAGTGCTTGTTTCTAAAGGGAACATTGATGCCGATGAGAACGCCATCTACAAAGTTGCGTCCAAGACTGTTGGAGTCAGGGTTCAAAATGCAATTGACCCTGAAATAGCTACATTGCTTGATGAAGATGATTTATCACGATTTGGTTCTGATGTTGAGGACTTAGAAGAAGACTTCGTAGTTCAGGCAAACTTATGCGAAGAAGGGGAGGATGATACAATGGATAATAAGTTTAGTGTGGCTGAGGATTCTGCTAGAACGGCAGGAAGCCATGATATTGTTAGTAACAAATCTTTTGGTGACCACATTTTTGAGGATGCAGACATGGACCATGTGGAAGAAGAAAGCGAGAATAGTGATGTTGATAAGCCACGAACTCGTCGGCTATTGGATGATCAATTTGACACGGATTCTCTTGGTGGTTGGTTCAGAGTTTCAATTCTTGCAAAATTGATGAAGGCTTTATGTTTGACCTTTTCAGATGGTGGTTTGATTGTCTGA

Coding sequence (CDS)

ATGGGGAGGAAGAAGAAGTTCTTCGACAAGAAGAAATCCGCAACTTTCCAATTACTCGCTCGTGACTCGTCCGATCCCAATTATGATGGAACTGCCGCCACCGACCGTGTTTTTGTTCGTGTCGACAACCACTCTTATACTCTCCCTGTCTTCGATGATGGCCCTATCGATGCTTCAGGTTCTGCCTGCTTTGATGAAGATCCTAACTCGATCTTTGCCGACGCTCCTGATGATTACGATGATGAAGAGAATGGAGGTTTTGGGACTTCTATGCGGTCTCGTGGGGAAGTTGGTGGGCCGGCGTCGTTACCGGAAAATGTTAGAAGGGAAATTTTGGAGCTAGGATTTCCTGACGATGGCTACAATTATTTGCTGCACCTTAGGGAGATTAAGAATACTGGTGGCGGTTCGGCGTTTTATCAGAACCCCAAGGCTAAGTTGGATCAGCTTCCACGCGATGAGAAGGTTGGTTGTTTTGTTTTAATGTTTTCTGGCATTGGGATTTTAACCGCGTATGATGCCTCCAGAGTGCTTGTTTCTAAAGGGAACATTGATGCCGATGAGAACGCCATCTACAAAGTTGCGTCCAAGACTGTTGGAGTCAGGGTTCAAAATGCAATTGACCCTGAAATAGCTACATTGCTTGATGAAGATGATTTATCACGATTTGGTTCTGATGTTGAGGACTTAGAAGAAGACTTCGTAGTTCAGGCAAACTTATGCGAAGAAGGGGAGGATGATACAATGGATAATAAGTTTAGTGTGGCTGAGGATTCTGCTAGAACGGCAGGAAGCCATGATATTGTTAGTAACAAATCTTTTGGTGACCACATTTTTGAGGATGCAGACATGGACCATGTGGAAGAAGAAAGCGAGAATAGTGATGTTGATAAGCCACGAACTCGTCGGCTATTGGATGATCAATTTGACACGGATTCTCTTGGTGGTTGGTTCAGAGTTTCAATTCTTGCAAAATTGATGAAGGCTTTATGTTTGACCTTTTCAGATGGTGGTTTGATTGTCTGA

Protein sequence

MGRKKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGPIDASGSACFDEDPNSIFADAPDDYDDEENGGFGTSMRSRGEVGGPASLPENVRREILELGFPDDGYNYLLHLREIKNTGGGSAFYQNPKAKLDQLPRDEKVGCFVLMFSGIGILTAYDASRVLVSKGNIDADENAIYKVASKTVGVRVQNAIDPEIATLLDEDDLSRFGSDVEDLEEDFVVQANLCEEGEDDTMDNKFSVAEDSARTAGSHDIVSNKSFGDHIFEDADMDHVEEESENSDVDKPRTRRLLDDQFDTDSLGGWFRVSILAKLMKALCLTFSDGGLIV

Homology

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BLAST of Spg007021 vs. NCBI nr
Match: XP_038898842.1 (protein LTV1 homolog [Benincasa hispida])

HSP 1 Score: 506.5 bits (1303), Expect = 1.8e-139
Identity = 261/308 (84.74%), Postives = 275/308 (89.29%), Query Frame = 0


Query: 4   KKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGPIDASGSAC 63
           KKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSY+LP FDDGP DASGSAC
Sbjct: 3   KKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYSLPAFDDGPADASGSAC 62

Query: 64  FDEDPNSIFADAPDDYDDEENGGFGTSMRSRGEVGGPASLPENVRREILELGFPDDGYNY 123
           +DEDPNSIFADAP+DYDDE+NGGFG S+R R EVGG A LPENVRREILELGFPDDGYNY
Sbjct: 63  YDEDPNSIFADAPEDYDDEDNGGFGPSLRLREEVGGTAPLPENVRREILELGFPDDGYNY 122

Query: 124 LLHLREIKNTGGGSAFYQNPKAKLDQLPRDEKVGCFVLMFSGIGILTAYDASRVLVSKGN 183
           LLHLREIKNTGGGSAFYQNPKAKL+Q+PRDEK               AYDASRV+VSKGN
Sbjct: 123 LLHLREIKNTGGGSAFYQNPKAKLNQVPRDEK---------------AYDASRVIVSKGN 182

Query: 184 IDADENAIYKVASKTVGVRVQNAIDPEIATLLDEDDLSRFGSDVEDLEEDFVVQANLCEE 243
           IDAD N IYKVASKTVGVRVQN +DPEIA LLD+DDLSRFGSDVEDLEEDFVVQANLCEE
Sbjct: 183 IDADGN-IYKVASKTVGVRVQNVVDPEIAALLDDDDLSRFGSDVEDLEEDFVVQANLCEE 242

Query: 244 GEDDTMDNKFSVAEDSARTAGSHDIVSNKSFGDHIFEDADMDHVEEESENSDVDKPRTRR 303
           GEDDT DNKF+V ED  RTAGSH +V NKSFGD+IFEDADMDH+EE SENSDVDKPRTRR
Sbjct: 243 GEDDTTDNKFTVVEDVERTAGSH-LVDNKSFGDNIFEDADMDHLEEVSENSDVDKPRTRR 293

Query: 304 LLDDQFDT 312
           LLDDQFDT
Sbjct: 303 LLDDQFDT 293

[Close]

BLAST of Spg007021 vs. NCBI nr
Match: XP_022940362.1 (protein LTV1 homolog [Cucurbita moschata])

HSP 1 Score: 496.5 bits (1277), Expect = 1.8e-136
Identity = 256/308 (83.12%), Postives = 272/308 (88.31%), Query Frame = 0


Query: 4   KKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGPIDASGSAC 63
           KKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGP+DASGSA 
Sbjct: 3   KKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGPVDASGSAS 62

Query: 64  FDEDPNSIFADAPDDYDDEENGGFGTSMRSRGEVGGPASLPENVRREILELGFPDDGYNY 123
           F+E+PNSIFADAPDDYDDEENGGFG S RSRGE+GGPASLPENVRREILELGFPDDGYNY
Sbjct: 63  FEENPNSIFADAPDDYDDEENGGFGASGRSRGELGGPASLPENVRREILELGFPDDGYNY 122

Query: 124 LLHLREIKNTGGGSAFYQNPKAKLDQLPRDEKVGCFVLMFSGIGILTAYDASRVLVSKGN 183
           LLHLR+IKNTGGGSAFY NPKAKL+QLPRDEK               AYDAS V+VS+G 
Sbjct: 123 LLHLRDIKNTGGGSAFYNNPKAKLNQLPRDEK---------------AYDASGVIVSQGT 182

Query: 184 IDADENAIYKVASKTVGVRVQNAIDPEIATLLDEDDLSRFGSDVEDLEEDFVVQANLCEE 243
            DADEN +YKVASKTVGV+VQNAIDPEIA LLD+DDLSRFGSDVEDLEEDFVVQANLCEE
Sbjct: 183 SDADENIMYKVASKTVGVKVQNAIDPEIAALLDDDDLSRFGSDVEDLEEDFVVQANLCEE 242

Query: 244 GEDDTMDNKFSVAEDSARTAGSHDIVSNKSFGDHIFEDADMDHVEEESENSDVDKPRTRR 303
           GED + DNKFSVAEDS R  GS +IV+NKSFGD IFEDAD+DHVE+     DVDKPRTRR
Sbjct: 243 GEDGSTDNKFSVAEDSDRATGSQNIVNNKSFGDDIFEDADVDHVED-----DVDKPRTRR 290

Query: 304 LLDDQFDT 312
           LLDDQFDT
Sbjct: 303 LLDDQFDT 290

[Close]

BLAST of Spg007021 vs. NCBI nr
Match: XP_023525399.1 (protein LTV1 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 495.7 bits (1275), Expect = 3.1e-136
Identity = 256/308 (83.12%), Postives = 271/308 (87.99%), Query Frame = 0


Query: 4   KKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGPIDASGSAC 63
           KKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGP+DASGSA 
Sbjct: 3   KKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGPVDASGSAS 62

Query: 64  FDEDPNSIFADAPDDYDDEENGGFGTSMRSRGEVGGPASLPENVRREILELGFPDDGYNY 123
           F+E+PNSIFADAPDDYDDEENGGFG S RSRGE+GGPASLPENVRREILELGFPDDGYNY
Sbjct: 63  FEENPNSIFADAPDDYDDEENGGFGASGRSRGELGGPASLPENVRREILELGFPDDGYNY 122

Query: 124 LLHLREIKNTGGGSAFYQNPKAKLDQLPRDEKVGCFVLMFSGIGILTAYDASRVLVSKGN 183
           LLHLR+IKNTGGGSAFY NPKAKL+QLPRDEK               AYDAS VLVS+G 
Sbjct: 123 LLHLRDIKNTGGGSAFYNNPKAKLNQLPRDEK---------------AYDASGVLVSQGT 182

Query: 184 IDADENAIYKVASKTVGVRVQNAIDPEIATLLDEDDLSRFGSDVEDLEEDFVVQANLCEE 243
            DADEN +YKVASKTVGV+VQNAIDPEIA LLD+DDLSRFGSDVEDLEEDFVVQANLCEE
Sbjct: 183 SDADENIMYKVASKTVGVKVQNAIDPEIAALLDDDDLSRFGSDVEDLEEDFVVQANLCEE 242

Query: 244 GEDDTMDNKFSVAEDSARTAGSHDIVSNKSFGDHIFEDADMDHVEEESENSDVDKPRTRR 303
           GED + DNKFSVAEDS R  GS +IV+NKSFGD IFEDAD+DHVE+      VDKPRTRR
Sbjct: 243 GEDGSTDNKFSVAEDSERATGSQNIVNNKSFGDEIFEDADVDHVEDA-----VDKPRTRR 290

Query: 304 LLDDQFDT 312
           LLDDQFDT
Sbjct: 303 LLDDQFDT 290

[Close]

BLAST of Spg007021 vs. NCBI nr
Match: XP_008448616.1 (PREDICTED: protein LTV1 homolog [Cucumis melo] >KAA0053005.1 protein LTV1-like protein [Cucumis melo var. makuwa] >TYK11461.1 protein LTV1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 490.0 bits (1260), Expect = 1.7e-134
Identity = 249/308 (80.84%), Postives = 272/308 (88.31%), Query Frame = 0


Query: 4   KKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGPIDASGSAC 63
           KKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLP FDDGP+DASGSAC
Sbjct: 3   KKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPAFDDGPVDASGSAC 62

Query: 64  FDEDPNSIFADAPDDYDDEENGGFGTSMRSRGEVGGPASLPENVRREILELGFPDDGYNY 123
           +DEDPNSIFADA +DYD+EENGGFG+SM+SRGEVGG +SLPENVRREILELGFPDDGYNY
Sbjct: 63  YDEDPNSIFADASEDYDEEENGGFGSSMQSRGEVGGTSSLPENVRREILELGFPDDGYNY 122

Query: 124 LLHLREIKNTGGGSAFYQNPKAKLDQLPRDEKVGCFVLMFSGIGILTAYDASRVLVSKGN 183
           LLHLREIKNTGGGS FYQNPKAKL+Q+PRDEK               AYDASR++VSK N
Sbjct: 123 LLHLREIKNTGGGSTFYQNPKAKLNQVPRDEK---------------AYDASRMVVSKMN 182

Query: 184 IDADENAIYKVASKTVGVRVQNAIDPEIATLLDEDDLSRFGSDVEDLEEDFVVQANLCEE 243
           +DADEN +YKVASK VG+RVQN +DPEIA LLD+DDLSRFGSDVEDLEEDFVVQANLCE+
Sbjct: 183 VDADEN-VYKVASKIVGIRVQNVVDPEIAALLDDDDLSRFGSDVEDLEEDFVVQANLCED 242

Query: 244 GEDDTMDNKFSVAEDSARTAGSHDIVSNKSFGDHIFEDADMDHVEEESENSDVDKPRTRR 303
           GE D  +NKFSV ED  R AGS  +V+NKSFGDHIFEDADM+H+EE  + SDVDKPRTRR
Sbjct: 243 GEGDATNNKFSVVEDDERKAGSL-LVNNKSFGDHIFEDADMEHLEEAGDGSDVDKPRTRR 293

Query: 304 LLDDQFDT 312
           LLDDQFDT
Sbjct: 303 LLDDQFDT 293

[Close]

BLAST of Spg007021 vs. NCBI nr
Match: XP_022981924.1 (protein LTV1 homolog [Cucurbita maxima])

HSP 1 Score: 487.6 bits (1254), Expect = 8.5e-134
Identity = 251/308 (81.49%), Postives = 270/308 (87.66%), Query Frame = 0


Query: 4   KKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGPIDASGSAC 63
           KKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGP+DASGSA 
Sbjct: 3   KKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGPVDASGSAS 62

Query: 64  FDEDPNSIFADAPDDYDDEENGGFGTSMRSRGEVGGPASLPENVRREILELGFPDDGYNY 123
           F+E+PNSIFADAPDDYDDEENGGFG S RSRGE+GGPASLPENVRREILELGFPDDGYNY
Sbjct: 63  FEENPNSIFADAPDDYDDEENGGFGASRRSRGELGGPASLPENVRREILELGFPDDGYNY 122

Query: 124 LLHLREIKNTGGGSAFYQNPKAKLDQLPRDEKVGCFVLMFSGIGILTAYDASRVLVSKGN 183
           LLHLR+IKNTGGGSAFY NPKAKL+QLPRDEK               AYDA+ V+VS+G 
Sbjct: 123 LLHLRDIKNTGGGSAFYNNPKAKLNQLPRDEK---------------AYDATGVIVSQGT 182

Query: 184 IDADENAIYKVASKTVGVRVQNAIDPEIATLLDEDDLSRFGSDVEDLEEDFVVQANLCEE 243
            DA EN +YKVASKTVGV+VQNAIDPEIA LLD+DDLSRFGSDVEDLEEDFVVQANLCEE
Sbjct: 183 SDAGENIMYKVASKTVGVKVQNAIDPEIAALLDDDDLSRFGSDVEDLEEDFVVQANLCEE 242

Query: 244 GEDDTMDNKFSVAEDSARTAGSHDIVSNKSFGDHIFEDADMDHVEEESENSDVDKPRTRR 303
           GE  +  NKFSVAEDS R  GS +I++NKSFGD+IFEDAD+DHVE+     DVDKPRTRR
Sbjct: 243 GEAGSTVNKFSVAEDSERATGSQNIINNKSFGDNIFEDADVDHVED-----DVDKPRTRR 290

Query: 304 LLDDQFDT 312
           LLDDQFDT
Sbjct: 303 LLDDQFDT 290

[Close]

BLAST of Spg007021 vs. ExPASy TrEMBL
Match: A0A6J1FJD8 (protein LTV1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111445999 PE=3 SV=1)

HSP 1 Score: 496.5 bits (1277), Expect = 8.8e-137
Identity = 256/308 (83.12%), Postives = 272/308 (88.31%), Query Frame = 0


Query: 4   KKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGPIDASGSAC 63
           KKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGP+DASGSA 
Sbjct: 3   KKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGPVDASGSAS 62

Query: 64  FDEDPNSIFADAPDDYDDEENGGFGTSMRSRGEVGGPASLPENVRREILELGFPDDGYNY 123
           F+E+PNSIFADAPDDYDDEENGGFG S RSRGE+GGPASLPENVRREILELGFPDDGYNY
Sbjct: 63  FEENPNSIFADAPDDYDDEENGGFGASGRSRGELGGPASLPENVRREILELGFPDDGYNY 122

Query: 124 LLHLREIKNTGGGSAFYQNPKAKLDQLPRDEKVGCFVLMFSGIGILTAYDASRVLVSKGN 183
           LLHLR+IKNTGGGSAFY NPKAKL+QLPRDEK               AYDAS V+VS+G 
Sbjct: 123 LLHLRDIKNTGGGSAFYNNPKAKLNQLPRDEK---------------AYDASGVIVSQGT 182

Query: 184 IDADENAIYKVASKTVGVRVQNAIDPEIATLLDEDDLSRFGSDVEDLEEDFVVQANLCEE 243
            DADEN +YKVASKTVGV+VQNAIDPEIA LLD+DDLSRFGSDVEDLEEDFVVQANLCEE
Sbjct: 183 SDADENIMYKVASKTVGVKVQNAIDPEIAALLDDDDLSRFGSDVEDLEEDFVVQANLCEE 242

Query: 244 GEDDTMDNKFSVAEDSARTAGSHDIVSNKSFGDHIFEDADMDHVEEESENSDVDKPRTRR 303
           GED + DNKFSVAEDS R  GS +IV+NKSFGD IFEDAD+DHVE+     DVDKPRTRR
Sbjct: 243 GEDGSTDNKFSVAEDSDRATGSQNIVNNKSFGDDIFEDADVDHVED-----DVDKPRTRR 290

Query: 304 LLDDQFDT 312
           LLDDQFDT
Sbjct: 303 LLDDQFDT 290

[Close]

BLAST of Spg007021 vs. ExPASy TrEMBL
Match: A0A5D3CI19 (Protein LTV1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001180 PE=3 SV=1)

HSP 1 Score: 490.0 bits (1260), Expect = 8.3e-135
Identity = 249/308 (80.84%), Postives = 272/308 (88.31%), Query Frame = 0


Query: 4   KKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGPIDASGSAC 63
           KKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLP FDDGP+DASGSAC
Sbjct: 3   KKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPAFDDGPVDASGSAC 62

Query: 64  FDEDPNSIFADAPDDYDDEENGGFGTSMRSRGEVGGPASLPENVRREILELGFPDDGYNY 123
           +DEDPNSIFADA +DYD+EENGGFG+SM+SRGEVGG +SLPENVRREILELGFPDDGYNY
Sbjct: 63  YDEDPNSIFADASEDYDEEENGGFGSSMQSRGEVGGTSSLPENVRREILELGFPDDGYNY 122

Query: 124 LLHLREIKNTGGGSAFYQNPKAKLDQLPRDEKVGCFVLMFSGIGILTAYDASRVLVSKGN 183
           LLHLREIKNTGGGS FYQNPKAKL+Q+PRDEK               AYDASR++VSK N
Sbjct: 123 LLHLREIKNTGGGSTFYQNPKAKLNQVPRDEK---------------AYDASRMVVSKMN 182

Query: 184 IDADENAIYKVASKTVGVRVQNAIDPEIATLLDEDDLSRFGSDVEDLEEDFVVQANLCEE 243
           +DADEN +YKVASK VG+RVQN +DPEIA LLD+DDLSRFGSDVEDLEEDFVVQANLCE+
Sbjct: 183 VDADEN-VYKVASKIVGIRVQNVVDPEIAALLDDDDLSRFGSDVEDLEEDFVVQANLCED 242

Query: 244 GEDDTMDNKFSVAEDSARTAGSHDIVSNKSFGDHIFEDADMDHVEEESENSDVDKPRTRR 303
           GE D  +NKFSV ED  R AGS  +V+NKSFGDHIFEDADM+H+EE  + SDVDKPRTRR
Sbjct: 243 GEGDATNNKFSVVEDDERKAGSL-LVNNKSFGDHIFEDADMEHLEEAGDGSDVDKPRTRR 293

Query: 304 LLDDQFDT 312
           LLDDQFDT
Sbjct: 303 LLDDQFDT 293

[Close]

BLAST of Spg007021 vs. ExPASy TrEMBL
Match: A0A1S3BKZ8 (protein LTV1 homolog OS=Cucumis melo OX=3656 GN=LOC103490738 PE=3 SV=1)

HSP 1 Score: 490.0 bits (1260), Expect = 8.3e-135
Identity = 249/308 (80.84%), Postives = 272/308 (88.31%), Query Frame = 0


Query: 4   KKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGPIDASGSAC 63
           KKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLP FDDGP+DASGSAC
Sbjct: 3   KKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPAFDDGPVDASGSAC 62

Query: 64  FDEDPNSIFADAPDDYDDEENGGFGTSMRSRGEVGGPASLPENVRREILELGFPDDGYNY 123
           +DEDPNSIFADA +DYD+EENGGFG+SM+SRGEVGG +SLPENVRREILELGFPDDGYNY
Sbjct: 63  YDEDPNSIFADASEDYDEEENGGFGSSMQSRGEVGGTSSLPENVRREILELGFPDDGYNY 122

Query: 124 LLHLREIKNTGGGSAFYQNPKAKLDQLPRDEKVGCFVLMFSGIGILTAYDASRVLVSKGN 183
           LLHLREIKNTGGGS FYQNPKAKL+Q+PRDEK               AYDASR++VSK N
Sbjct: 123 LLHLREIKNTGGGSTFYQNPKAKLNQVPRDEK---------------AYDASRMVVSKMN 182

Query: 184 IDADENAIYKVASKTVGVRVQNAIDPEIATLLDEDDLSRFGSDVEDLEEDFVVQANLCEE 243
           +DADEN +YKVASK VG+RVQN +DPEIA LLD+DDLSRFGSDVEDLEEDFVVQANLCE+
Sbjct: 183 VDADEN-VYKVASKIVGIRVQNVVDPEIAALLDDDDLSRFGSDVEDLEEDFVVQANLCED 242

Query: 244 GEDDTMDNKFSVAEDSARTAGSHDIVSNKSFGDHIFEDADMDHVEEESENSDVDKPRTRR 303
           GE D  +NKFSV ED  R AGS  +V+NKSFGDHIFEDADM+H+EE  + SDVDKPRTRR
Sbjct: 243 GEGDATNNKFSVVEDDERKAGSL-LVNNKSFGDHIFEDADMEHLEEAGDGSDVDKPRTRR 293

Query: 304 LLDDQFDT 312
           LLDDQFDT
Sbjct: 303 LLDDQFDT 293

[Close]

BLAST of Spg007021 vs. ExPASy TrEMBL
Match: A0A6J1J360 (protein LTV1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111480921 PE=3 SV=1)

HSP 1 Score: 487.6 bits (1254), Expect = 4.1e-134
Identity = 251/308 (81.49%), Postives = 270/308 (87.66%), Query Frame = 0


Query: 4   KKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGPIDASGSAC 63
           KKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGP+DASGSA 
Sbjct: 3   KKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGPVDASGSAS 62

Query: 64  FDEDPNSIFADAPDDYDDEENGGFGTSMRSRGEVGGPASLPENVRREILELGFPDDGYNY 123
           F+E+PNSIFADAPDDYDDEENGGFG S RSRGE+GGPASLPENVRREILELGFPDDGYNY
Sbjct: 63  FEENPNSIFADAPDDYDDEENGGFGASRRSRGELGGPASLPENVRREILELGFPDDGYNY 122

Query: 124 LLHLREIKNTGGGSAFYQNPKAKLDQLPRDEKVGCFVLMFSGIGILTAYDASRVLVSKGN 183
           LLHLR+IKNTGGGSAFY NPKAKL+QLPRDEK               AYDA+ V+VS+G 
Sbjct: 123 LLHLRDIKNTGGGSAFYNNPKAKLNQLPRDEK---------------AYDATGVIVSQGT 182

Query: 184 IDADENAIYKVASKTVGVRVQNAIDPEIATLLDEDDLSRFGSDVEDLEEDFVVQANLCEE 243
            DA EN +YKVASKTVGV+VQNAIDPEIA LLD+DDLSRFGSDVEDLEEDFVVQANLCEE
Sbjct: 183 SDAGENIMYKVASKTVGVKVQNAIDPEIAALLDDDDLSRFGSDVEDLEEDFVVQANLCEE 242

Query: 244 GEDDTMDNKFSVAEDSARTAGSHDIVSNKSFGDHIFEDADMDHVEEESENSDVDKPRTRR 303
           GE  +  NKFSVAEDS R  GS +I++NKSFGD+IFEDAD+DHVE+     DVDKPRTRR
Sbjct: 243 GEAGSTVNKFSVAEDSERATGSQNIINNKSFGDNIFEDADVDHVED-----DVDKPRTRR 290

Query: 304 LLDDQFDT 312
           LLDDQFDT
Sbjct: 303 LLDDQFDT 290

[Close]

BLAST of Spg007021 vs. ExPASy TrEMBL
Match: A0A0A0L517 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G006680 PE=3 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 1.7e-132
Identity = 246/308 (79.87%), Postives = 271/308 (87.99%), Query Frame = 0


Query: 4   KKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGPIDASGSAC 63
           KKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLP FDDGP+DASGSAC
Sbjct: 3   KKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPAFDDGPVDASGSAC 62

Query: 64  FDEDPNSIFADAPDDYDDEENGGFGTSMRSRGEVGGPASLPENVRREILELGFPDDGYNY 123
           +DEDPNSIFADA +DYD+EENGGFG+SM+  G+VGG +SLPENVR++ILELGFPDDGYNY
Sbjct: 63  YDEDPNSIFADASEDYDEEENGGFGSSMQFSGDVGGTSSLPENVRKDILELGFPDDGYNY 122

Query: 124 LLHLREIKNTGGGSAFYQNPKAKLDQLPRDEKVGCFVLMFSGIGILTAYDASRVLVSKGN 183
           LLHLREIKNTGGGS FYQNPKAKL+Q+PRDEK               AYDASR++VSK N
Sbjct: 123 LLHLREIKNTGGGSTFYQNPKAKLNQVPRDEK---------------AYDASRMIVSKMN 182

Query: 184 IDADENAIYKVASKTVGVRVQNAIDPEIATLLDEDDLSRFGSDVEDLEEDFVVQANLCEE 243
           +DADENA YKVASK VGVRVQN +DPEIA LLD+DDLSRFGSDVEDLEEDFVVQANLCE+
Sbjct: 183 VDADENA-YKVASKIVGVRVQNVVDPEIAALLDDDDLSRFGSDVEDLEEDFVVQANLCED 242

Query: 244 GEDDTMDNKFSVAEDSARTAGSHDIVSNKSFGDHIFEDADMDHVEEESENSDVDKPRTRR 303
           GED T ++K SV ED  RTAGS  +V+NKSFGDHIFEDADM+H+EE  + SDVDKPRTRR
Sbjct: 243 GEDGTTNSKISVVEDDERTAGSL-LVNNKSFGDHIFEDADMEHLEEAVDGSDVDKPRTRR 293

Query: 304 LLDDQFDT 312
           LLDDQFDT
Sbjct: 303 LLDDQFDT 293

[Close]

BLAST of Spg007021 vs. TAIR 10
Match: AT3G49990.1 (unknown protein; Has 1524 Blast hits to 1298 proteins in 225 species: Archae - 9; Bacteria - 84; Metazoa - 474; Fungi - 184; Plants - 98; Viruses - 17; Other Eukaryotes - 658 (source: NCBI BLink). )

HSP 1 Score: 213.0 bits (541), Expect = 3.7e-55
Identity = 143/302 (47.35%), Postives = 178/302 (58.94%), Query Frame = 0


Query: 4   KKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGPIDASGSAC 63
           KKKF DKKK+ATF+L  RD+SDP Y      D++F+RVD +    PV  +G I+      
Sbjct: 3   KKKFIDKKKAATFELCPRDTSDPRYSDAPGGDKIFLRVDQN----PVNINGFIEEDEE-- 62

Query: 64  FDEDPNSIFADAPDDYDDEENGGFGTSMRSRGEVGGPASLPENVRREILELGFPDDGYNY 123
            +E  +S F DAP++ D      +G S  S G+    +SLP +VR+EILELG+PDDGYNY
Sbjct: 63  -EEGDSSRFDDAPEEMD------YGYS--SFGD--SSSSLPAHVRKEILELGYPDDGYNY 122

Query: 124 LLHLREIKNTGGGSAFYQNPKAKLDQLPRDEKVGCFVLMFSGIGILTAYDASRVLVS--- 183
           L HLREIKNTGGGS FY NPK ++ QLPRD K               AYDASRV +S   
Sbjct: 123 LEHLREIKNTGGGSNFYVNPKYEVAQLPRDVK---------------AYDASRVKISGMV 182

Query: 184 --KGNIDADENAIYKVASKTVGVRVQNAIDPEIATLLDEDDLSRFGSDVEDLEEDFVVQA 243
             +GN   D   +Y VASKTV V+VQ AIDPE+A LL+  D S FGSDVEDLEEDFVVQA
Sbjct: 183 NEEGN---DNKLMYSVASKTVNVKVQKAIDPEVAALLENSDGSEFGSDVEDLEEDFVVQA 242

Query: 244 NLCEEGEDDTMDN---KFSVAEDSARTAGSHDIVSNKSFGDHIFEDADMDHVEEESENSD 298
           NL ++GE   + N   +FSV  +         +  N      I E  D   + E   +SD
Sbjct: 243 NLTQKGESSGVSNGELEFSVRREVRERESDEPVAENPRVPRQIDELFDQLELNEYGSDSD 269

The following BLAST results are available for this feature:

BLAST of Spg007021 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038898842.1	1.8e-139	84.74	protein LTV1 homolog [Benincasa hispida]	[more]
XP_022940362.1	1.8e-136	83.12	protein LTV1 homolog [Cucurbita moschata]	[more]
XP_023525399.1	3.1e-136	83.12	protein LTV1 homolog [Cucurbita pepo subsp. pepo]	[more]
XP_008448616.1	1.7e-134	80.84	PREDICTED: protein LTV1 homolog [Cucumis melo] >KAA0053005.1 protein LTV1-like p...	[more]
XP_022981924.1	8.5e-134	81.49	protein LTV1 homolog [Cucurbita maxima]	[more]

BLAST of Spg007021 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg007021 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FJD8	8.8e-137	83.12	protein LTV1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111445999 PE=3 SV=1	[more]
A0A5D3CI19	8.3e-135	80.84	Protein LTV1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3BKZ8	8.3e-135	80.84	protein LTV1 homolog OS=Cucumis melo OX=3656 GN=LOC103490738 PE=3 SV=1	[more]
A0A6J1J360	4.1e-134	81.49	protein LTV1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111480921 PE=3 SV=1	[more]
A0A0A0L517	1.7e-132	79.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G006680 PE=3 SV=1	[more]

BLAST of Spg007021 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G49990.1	3.7e-55	47.35	unknown protein; Has 1524 Blast hits to 1298 proteins in 225 species: Archae - 9...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007307	Low temperature viability protein Ltv1	PFAM	PF04180	LTV	coord: 9..292 e-value: 8.4E-10 score: 38.9
IPR007307	Low temperature viability protein Ltv1	PANTHER	PTHR21531	LOW-TEMPERATURE VIABILITY PROTEIN LTV1-RELATED	coord: 1..311
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg007021.1	Spg007021.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042274	ribosomal small subunit biogenesis
biological_process	GO:0000056	ribosomal small subunit export from nucleus
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005634	nucleus
cellular_component	GO:0030688	preribosome, small subunit precursor