Spg006939 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg006939
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPeptidyl-prolyl cis-trans isomerase
Locationscaffold10: 39848646 .. 39850321 (+)
RNA-Seq ExpressionSpg006939
SyntenySpg006939
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GATTGACACACGAGTAAGGACGTAGCATATCGAAGTTATCTTGACAGCCATGGCCTCCGCATTCTCAATGGGTGTGTTGGGCACTCTGCCGTCTCCCTCGCAGGTTCTCTTCTAACTTCTACTTGCTTCAAACTTTTCTAGACCTGCATTTGCGTCTTTCACATCAGATTCCAAGTTTTTTCTCTCTTCTTTGTAACTTGAAATCATGTGATTCCTGTTAATTTTTGTTTAATTTGTTCTTCTTATCATCTATTGGAACCCCAGTTTTATTCCTTCTGAATTTGTTTCATCTACAGAGTAAATGTTGCCTTCGCGTGTTAAATTCTCCAAAGACTCGACTGATTTGCAGTTCCACGAGTTTGGTATCAATTTCCTCGCAAGTTCAAACTATGAACTCCCCTGTAAGAATAATGACATGGGGATCTCAACGCCCAAGTTTTCCTACCTTGAGAGAAGCGTTTCCCATGAAGAACAGAAGACTCATCTGTGTAAACTCTACGGCAAAAGTAAGTGAGTTATTATGTTTGTTTGCTTCTTAGTTTTGAAATTATCTGTCGATTGGCTGAAACAAAAGGGGGAACTATTCCAACCCATGTTATAAGTACATATTGAAACAAAGATATTCAAAGTGGAAGGGGTTGAATATTTCATAGTTTGTTGATTGGGTTGCTAGATTCTTTGTCCAGAAACGTTCCTTCTTGGTCTGCCTTGATTGGGTCCTCATATTAGTTGTCAATTTTGTTTATCTTAATTGTTATACTTTATGTTAGTGTAGGATGTAGAGCTGCAAGCAGAAGTGTCAACAAAGTGCTTTTTCGATGTAGAAATTGGAGGTGAACCAGTAGGTAGAATCGTGATTGGACTTTTTGGAGATGTTGTTCCAAAAACAGTAGAGAATTTCCGAGCCTTGTGCACAGGCAAGCTGGAAGACCACCATCTTTTTAATGATCTTTTGTATTTATCGACTTCTGCTTGAAGTAATTTTTCCACTTTGTTCATTGTTTATCAAATAAAATATCATGGTGCAGGAGAAAAGGGATATGGGTATAAAGGATGCTCCTTCCATAGGGTGATTAAAGATTTTATGATTCAAGGAGGGGACTTCACTAATGGAGATGTACTCATTCTCTTTTTCTCTCAACATATATACACATATATGTACTTAAATATGTATATATATTTATATATTCATATACACAAGTGGAATTCTAGGCTTTCAAGAAAAAAGGCCTCCAGTCTGATTAAGGCTGTATTGTTGTTGTTTTGGCTGCAGGGAACTGGAGGTGTCAGTATCTATGGTTCCAGTTTCCGAGACGAGAATTTTTCATGTATGTCATGACTATAGTTCTATATGACTGTTGTGATTCTGGAATGATTAAGTTTTTGGTATCAGCCTCTGGTTAGGAATATGTAAGGAAATAAAACTAAAGCTGCAATGACACTGAAAACTTTTTGACTTGTCTGCAGTGAAGCATGTAGGGCCTGGTGTACTTAGCATGGCCAATGCCGGACCTAATACTAATGGAAGCCAATTCTTCATCTGCACTGTAAAGGTGATACAACTTCAGCACCCTATTCTTTTCTTAAATTCTACTGCAGCCTATTACTTTGAACATGGATGGAATTATTCTGCTTTCATTTTAATATCTTTGTTTTTGTCACCCTTTTCTGTTTAA

mRNA sequence

ATGGCCTCCGCATTCTCAATGGGTGTGTTGGGCACTCTGCCGTCTCCCTCGCAGAGTAAATGTTGCCTTCGCGTGTTAAATTCTCCAAAGACTCGACTGATTTGCAGTTCCACGAGTTTGGTATCAATTTCCTCGCAAGTTCAAACTATGAACTCCCCTGTAAGAATAATGACATGGGGATCTCAACGCCCAAGTTTTCCTACCTTGAGAGAAGCGTTTCCCATGAAGAACAGAAGACTCATCTGTGTAAACTCTACGGCAAAAGATGTAGAGCTGCAAGCAGAAGTGTCAACAAAGTGCTTTTTCGATGTAGAAATTGGAGGTGAACCAGTAGGTAGAATCGTGATTGGACTTTTTGGAGATGTTGTTCCAAAAACAGTAGAGAATTTCCGAGCCTTGTGCACAGGCAAGCTGGAAGACCACCATCTTTTTAATGATCTTTTTTTCCGAGACGAGAATTTTTCATTGAAGCATGTAGGGCCTGGTGTACTTAGCATGGCCAATGCCGGACCTAATACTAATGGAAGCCAATTCTTCATCTGCACTGTAAAGGTGATACAACTTCAGCACCCTATTCTTTTCTTAAATTCTACTGCAGCCTATTACTTTGAACATGGATGGAATTATTCTGCTTTCATTTTAATATCTTTGTTTTTGTCACCCTTTTCTGTTTAA

Coding sequence (CDS)

ATGGCCTCCGCATTCTCAATGGGTGTGTTGGGCACTCTGCCGTCTCCCTCGCAGAGTAAATGTTGCCTTCGCGTGTTAAATTCTCCAAAGACTCGACTGATTTGCAGTTCCACGAGTTTGGTATCAATTTCCTCGCAAGTTCAAACTATGAACTCCCCTGTAAGAATAATGACATGGGGATCTCAACGCCCAAGTTTTCCTACCTTGAGAGAAGCGTTTCCCATGAAGAACAGAAGACTCATCTGTGTAAACTCTACGGCAAAAGATGTAGAGCTGCAAGCAGAAGTGTCAACAAAGTGCTTTTTCGATGTAGAAATTGGAGGTGAACCAGTAGGTAGAATCGTGATTGGACTTTTTGGAGATGTTGTTCCAAAAACAGTAGAGAATTTCCGAGCCTTGTGCACAGGCAAGCTGGAAGACCACCATCTTTTTAATGATCTTTTTTTCCGAGACGAGAATTTTTCATTGAAGCATGTAGGGCCTGGTGTACTTAGCATGGCCAATGCCGGACCTAATACTAATGGAAGCCAATTCTTCATCTGCACTGTAAAGGTGATACAACTTCAGCACCCTATTCTTTTCTTAAATTCTACTGCAGCCTATTACTTTGAACATGGATGGAATTATTCTGCTTTCATTTTAATATCTTTGTTTTTGTCACCCTTTTCTGTTTAA

Protein sequence

MASAFSMGVLGTLPSPSQSKCCLRVLNSPKTRLICSSTSLVSISSQVQTMNSPVRIMTWGSQRPSFPTLREAFPMKNRRLICVNSTAKDVELQAEVSTKCFFDVEIGGEPVGRIVIGLFGDVVPKTVENFRALCTGKLEDHHLFNDLFFRDENFSLKHVGPGVLSMANAGPNTNGSQFFICTVKVIQLQHPILFLNSTAAYYFEHGWNYSAFILISLFLSPFSV
Homology
[Close]
BLAST of Spg006939 vs. NCBI nr
Match: KAG6601925.1 (Peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 283.5 bits (724), Expect = 1.6e-72
Identity = 148/211 (70.14%), Postives = 161/211 (76.30%), Query Frame = 0 

Query: 1   MASAFSMGVLGTLPSPSQSKCCLRVLNSPKTRLICSSTSLVSISSQVQTMNSPVRIMTWG 60
           MASA  MGVLGTLPSPSQ + CL  L SPKT+LICSSTSLV ISSQV++MNSPVR +TWG
Sbjct: 4   MASAVPMGVLGTLPSPSQGQYCLPSLKSPKTQLICSSTSLVPISSQVRSMNSPVRTLTWG 63

Query: 61  SQRPSFPTLREAFPMKNRRLICVNSTAKDVELQAEVSTKCFFDVEIGGEPVGRIVIGLFG 120
           S+R SFP L+EAFP+KNRRL+C N+TAKDVELQAEVSTKCFFDVEIGGEP GRIVIGLF 
Sbjct: 64  SRRSSFPILKEAFPVKNRRLVCANTTAKDVELQAEVSTKCFFDVEIGGEPAGRIVIGLFA 123

Query: 121 DVVPKTVENFRALCTGK-------LEDHHLFNDLF---------------------FRDE 180
           DVVP+TVENFRALCTG+          H +  D                       FRDE
Sbjct: 124 DVVPRTVENFRALCTGEKGYGYKGCSFHRVIKDFMIQGGDFTNGDGTGGISIYGPSFRDE 183

Query: 181 NFSLKHVGPGVLSMANAGPNTNGSQFFICTV 184
           NFSLKHVGPGVLSMANAGPNTNGSQFFICTV
Sbjct: 184 NFSLKHVGPGVLSMANAGPNTNGSQFFICTV 214

[Close]
BLAST of Spg006939 vs. NCBI nr
Match: XP_038875165.1 (peptidyl-prolyl cis-trans isomerase A1 [Benincasa hispida])

HSP 1 Score: 281.6 bits (719), Expect = 6.1e-72
Identity = 149/212 (70.28%), Postives = 156/212 (73.58%), Query Frame = 0 

Query: 1   MASAFSMGVLGTLPSPSQSKCCLRVLNSPKTRLICSSTSLVSISSQVQTMNSPVRIMTWG 60
           MASA  M VLG LP PSQ KCC   LNSP T+LICSSTS  SIS QVQTMN PVR +TWG
Sbjct: 1   MASAIPMSVLGPLPYPSQGKCCQPSLNSPNTQLICSSTSSRSISLQVQTMNFPVRTLTWG 60

Query: 61  SQRPSFPTLREAFPMKNRRLICVNSTAKDVELQAEVSTKCFFDVEIGGEPVGRIVIGLFG 120
           SQR SFP +REA PMKNRRL CVNST KDVELQAEVSTKCFFD+EIGGEPVGRIVIGLFG
Sbjct: 61  SQRSSFPIVREASPMKNRRLTCVNSTTKDVELQAEVSTKCFFDIEIGGEPVGRIVIGLFG 120

Query: 121 DVVPKTVENFRALCTGK-------LEDHHLFNDLF---------------------FRDE 180
           DVVP+TVENFRALCTG+          H +  D                       FRDE
Sbjct: 121 DVVPRTVENFRALCTGEKGYGYKGCSFHRVIKDFMIQGGDFTNGDGTGGVSIYGSSFRDE 180

Query: 181 NFSLKHVGPGVLSMANAGPNTNGSQFFICTVK 185
           NFSLKHVGPGVLSMANAGPNTNGSQFFICTVK
Sbjct: 181 NFSLKHVGPGVLSMANAGPNTNGSQFFICTVK 212

[Close]
BLAST of Spg006939 vs. NCBI nr
Match: XP_023512430.1 (peptidyl-prolyl cis-trans isomerase A1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 281.2 bits (718), Expect = 7.9e-72
Identity = 147/211 (69.67%), Postives = 159/211 (75.36%), Query Frame = 0 

Query: 1   MASAFSMGVLGTLPSPSQSKCCLRVLNSPKTRLICSSTSLVSISSQVQTMNSPVRIMTWG 60
           MAS   MGVLGTLPSPSQ + CL  L SPKT+LICS+TSLVSISSQV+ MNSPVR +TWG
Sbjct: 4   MASVVPMGVLGTLPSPSQGQYCLPSLKSPKTQLICSATSLVSISSQVRPMNSPVRTLTWG 63

Query: 61  SQRPSFPTLREAFPMKNRRLICVNSTAKDVELQAEVSTKCFFDVEIGGEPVGRIVIGLFG 120
           S+R SFP LREAFP+KNRRL+C N+ AKDVELQAEVSTKCFFDVEIGGEP GRIVIGLF 
Sbjct: 64  SRRSSFPILREAFPVKNRRLVCANTAAKDVELQAEVSTKCFFDVEIGGEPAGRIVIGLFA 123

Query: 121 DVVPKTVENFRALCTGK-------LEDHHLFNDLF---------------------FRDE 180
           DVVP+TVENFRALCTG+          H +  D                       FRDE
Sbjct: 124 DVVPRTVENFRALCTGEKGYGYKGCSFHRVIKDFMIQGGDFTNGDGTGGISIYGPSFRDE 183

Query: 181 NFSLKHVGPGVLSMANAGPNTNGSQFFICTV 184
           NFSLKHVGPGVLSMANAGPNTNGSQFFICTV
Sbjct: 184 NFSLKHVGPGVLSMANAGPNTNGSQFFICTV 214

[Close]
BLAST of Spg006939 vs. NCBI nr
Match: XP_022990158.1 (peptidyl-prolyl cis-trans isomerase A1 [Cucurbita maxima])

HSP 1 Score: 279.3 bits (713), Expect = 3.0e-71
Identity = 148/211 (70.14%), Postives = 159/211 (75.36%), Query Frame = 0 

Query: 1   MASAFSMGVLGTLPSPSQSKCCLRVLNSPKTRLICSSTSLVSISSQVQTMNSPVRIMTWG 60
           MASA  MGVLGTLPSPSQ +  LR L SPKT+LICSSTSLVSISSQV+ MNSPVR  TWG
Sbjct: 4   MASAVPMGVLGTLPSPSQGQYFLRSLKSPKTQLICSSTSLVSISSQVRPMNSPVRTSTWG 63

Query: 61  SQRPSFPTLREAFPMKNRRLICVNSTAKDVELQAEVSTKCFFDVEIGGEPVGRIVIGLFG 120
           S+R SFP LREAFP+KNRRL+C ++ AKDVELQAEVSTKCFFDVEIGGEP GRIVIGLF 
Sbjct: 64  SRRSSFPILREAFPVKNRRLVCASTAAKDVELQAEVSTKCFFDVEIGGEPAGRIVIGLFA 123

Query: 121 DVVPKTVENFRALCTGK-------LEDHHLFNDLF---------------------FRDE 180
           DVVP+TVENFRALCTG+          H +  D                       FRDE
Sbjct: 124 DVVPRTVENFRALCTGEKGYGYKGCSFHRVIKDFMIQGGDFTNGDGTGGISIYGPSFRDE 183

Query: 181 NFSLKHVGPGVLSMANAGPNTNGSQFFICTV 184
           NFSLKHVGPGVLSMANAGPNTNGSQFFICTV
Sbjct: 184 NFSLKHVGPGVLSMANAGPNTNGSQFFICTV 214

[Close]
BLAST of Spg006939 vs. NCBI nr
Match: XP_022922541.1 (peptidyl-prolyl cis-trans isomerase A1 [Cucurbita moschata])

HSP 1 Score: 277.7 bits (709), Expect = 8.7e-71
Identity = 146/211 (69.19%), Postives = 158/211 (74.88%), Query Frame = 0 

Query: 1   MASAFSMGVLGTLPSPSQSKCCLRVLNSPKTRLICSSTSLVSISSQVQTMNSPVRIMTWG 60
           MASA  MGVLGTLPSPSQ + CL  L S KT+LICSSTSLV IS QV++MNSPVR +TWG
Sbjct: 4   MASAVPMGVLGTLPSPSQGRYCLPSLKSTKTQLICSSTSLVPISLQVRSMNSPVRTLTWG 63

Query: 61  SQRPSFPTLREAFPMKNRRLICVNSTAKDVELQAEVSTKCFFDVEIGGEPVGRIVIGLFG 120
           S+R SFP LREAFP+KNRRL+C N+ AKDVELQAEVSTKCFFDVEIGGEP GRIVIGLF 
Sbjct: 64  SRRSSFPILREAFPVKNRRLVCANTAAKDVELQAEVSTKCFFDVEIGGEPAGRIVIGLFA 123

Query: 121 DVVPKTVENFRALCTGK-------LEDHHLFNDLF---------------------FRDE 180
           DVVP+TVENFRALCTG+          H +  D                       FRDE
Sbjct: 124 DVVPRTVENFRALCTGEKGYGYKGCSFHRVIKDFMIQGGDFTNGDGTGGISIYGPSFRDE 183

Query: 181 NFSLKHVGPGVLSMANAGPNTNGSQFFICTV 184
           NFSLKHVGPGVLSMANAGPNTNGSQFFICTV
Sbjct: 184 NFSLKHVGPGVLSMANAGPNTNGSQFFICTV 214

[Close]
BLAST of Spg006939 vs. ExPASy Swiss-Prot
Match: P34791 (Peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CYP20-3 PE=1 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 4.4e-33
Identity = 77/147 (52.38%), Postives = 92/147 (62.59%), Query Frame = 0 

Query: 76  KNRRLICVNSTAKD----VELQAEVSTKCFFDVEIGGEPVGRIVIGLFGDVVPKTVENFR 135
           K++R  CV S A +    +E QA+V+ K +FDVEIGGE  GRIV+GLFG+VVPKTVENFR
Sbjct: 69  KHQRTACVKSMAAEEEEVIEPQAKVTNKVYFDVEIGGEVAGRIVMGLFGEVVPKTVENFR 128

Query: 136 ALCTGKLE-------DHHLFNDLF---------------------FRDENFSLKHVGPGV 191
           ALCTG+ +        H +  D                       F DENF+LKH GPG+
Sbjct: 129 ALCTGEKKYGYKGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGAKFEDENFTLKHTGPGI 188

[Close]
BLAST of Spg006939 vs. ExPASy Swiss-Prot
Match: Q41651 (Peptidyl-prolyl cis-trans isomerase, chloroplastic OS=Vicia faba OX=3906 PE=1 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 6.0e-30
Identity = 73/142 (51.41%), Postives = 87/142 (61.27%), Query Frame = 0 

Query: 71  EAFPMKNRRLICVNSTAKDV-ELQAEVSTKCFFDVEIGGEPVGRIVIGLFGDVVPKTVEN 130
           +A  + +RR+ C +    +V ELQA+V++K FFD+EIGGE  GRIVIGLFGD VPKTVEN
Sbjct: 54  KAKSITSRRITCASGAQGEVAELQAKVTSKIFFDIEIGGESAGRIVIGLFGDAVPKTVEN 113

Query: 131 FRALCTGKLE-------DHHLFNDLF---------------------FRDENFSLKHVGP 184
           F+ L TG           H +  +                       F DE+F LKHVGP
Sbjct: 114 FKTLSTGAKGYGYQGSFFHRIIPNFMIQGGDFTEGNGTGGVSIYGSKFEDESFDLKHVGP 173

[Close]
BLAST of Spg006939 vs. ExPASy Swiss-Prot
Match: Q9ASS6 (Photosynthetic NDH subunit of lumenal location 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PNSL5 PE=1 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.5e-28
Identity = 81/194 (41.75%), Postives = 107/194 (55.15%), Query Frame = 0 

Query: 26  LNSPKTRLICSSTSLVSISSQVQTMNSPVRIMTWGSQRP---SFPTLREAFPMKNRRLIC 85
           L++P  RL   +TS  + +S      S    +++ S  P   S   L  ++  +N R   
Sbjct: 14  LSAPPRRLSPINTSAFTSTSFRLRTKSSFDSISFSSSTPFSASSLLLHTSYTKRNHRCFS 73

Query: 86  VNSTAKDV-ELQAEVSTKCFFDVEIG---GEPVGRIVIGLFGDVVPKTVENFRALCTGK- 145
           V S A+ V E Q++++ K +FD+ +G   G+  GRIVIGL+GD VP+TVENFRALCTG+ 
Sbjct: 74  VQSNAEVVTEPQSKITHKVYFDISVGNPVGKLAGRIVIGLYGDDVPQTVENFRALCTGEK 133

Query: 146 ------LEDHHLFNDLF---------------------FRDENFSLKHVGPGVLSMANAG 185
                    H +  D                       F+DENF L HVGPGVLSMANAG
Sbjct: 134 GFGYKGSTFHRVIRDFMIQGGDFEKGNGTGGKSVYGRTFKDENFKLSHVGPGVLSMANAG 193

[Close]
BLAST of Spg006939 vs. ExPASy Swiss-Prot
Match: P0CP79 (Peptidyl-prolyl cis-trans isomerase B OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=CPR2 PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 7.5e-25
Identity = 66/145 (45.52%), Postives = 78/145 (53.79%), Query Frame = 0 

Query: 81  IC-VNSTAKDVELQAEVSTKCFFDVEIGGEPVGRIVIGLFGDVVPKTVENFRALCTGKLE 140
           IC V S   D      ++ K +FD+E GG+P+GRIV+GL+G  VPKT ENFRAL TGK  
Sbjct: 27  ICFVLSPGVDAAKGPVITNKVYFDIEHGGKPLGRIVMGLYGKTVPKTAENFRALATGKNS 86

Query: 141 D-------------HHLFNDLF---------------------FRDENFSLKHVGPGVLS 191
           D             H +  +                       F DENF LKH GPGVLS
Sbjct: 87  DGEDLGYGYEGSSFHRIIKNFMIQGGDFTKGDGTGGKSIYGSKFPDENFKLKHTGPGVLS 146

[Close]
BLAST of Spg006939 vs. ExPASy Swiss-Prot
Match: P0CP78 (Peptidyl-prolyl cis-trans isomerase B OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=CPR2 PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 7.5e-25
Identity = 66/145 (45.52%), Postives = 78/145 (53.79%), Query Frame = 0 

Query: 81  IC-VNSTAKDVELQAEVSTKCFFDVEIGGEPVGRIVIGLFGDVVPKTVENFRALCTGKLE 140
           IC V S   D      ++ K +FD+E GG+P+GRIV+GL+G  VPKT ENFRAL TGK  
Sbjct: 27  ICFVLSPGVDAAKGPVITNKVYFDIEHGGKPLGRIVMGLYGKTVPKTAENFRALATGKNS 86

Query: 141 D-------------HHLFNDLF---------------------FRDENFSLKHVGPGVLS 191
           D             H +  +                       F DENF LKH GPGVLS
Sbjct: 87  DGEDLGYGYEGSSFHRIIKNFMIQGGDFTKGDGTGGKSIYGSKFPDENFKLKHTGPGVLS 146

[Close]
BLAST of Spg006939 vs. ExPASy TrEMBL
Match: A0A6J1JSG2 (Peptidyl-prolyl cis-trans isomerase OS=Cucurbita maxima OX=3661 GN=LOC111487130 PE=3 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 1.5e-71
Identity = 148/211 (70.14%), Postives = 159/211 (75.36%), Query Frame = 0 

Query: 1   MASAFSMGVLGTLPSPSQSKCCLRVLNSPKTRLICSSTSLVSISSQVQTMNSPVRIMTWG 60
           MASA  MGVLGTLPSPSQ +  LR L SPKT+LICSSTSLVSISSQV+ MNSPVR  TWG
Sbjct: 4   MASAVPMGVLGTLPSPSQGQYFLRSLKSPKTQLICSSTSLVSISSQVRPMNSPVRTSTWG 63

Query: 61  SQRPSFPTLREAFPMKNRRLICVNSTAKDVELQAEVSTKCFFDVEIGGEPVGRIVIGLFG 120
           S+R SFP LREAFP+KNRRL+C ++ AKDVELQAEVSTKCFFDVEIGGEP GRIVIGLF 
Sbjct: 64  SRRSSFPILREAFPVKNRRLVCASTAAKDVELQAEVSTKCFFDVEIGGEPAGRIVIGLFA 123

Query: 121 DVVPKTVENFRALCTGK-------LEDHHLFNDLF---------------------FRDE 180
           DVVP+TVENFRALCTG+          H +  D                       FRDE
Sbjct: 124 DVVPRTVENFRALCTGEKGYGYKGCSFHRVIKDFMIQGGDFTNGDGTGGISIYGPSFRDE 183

Query: 181 NFSLKHVGPGVLSMANAGPNTNGSQFFICTV 184
           NFSLKHVGPGVLSMANAGPNTNGSQFFICTV
Sbjct: 184 NFSLKHVGPGVLSMANAGPNTNGSQFFICTV 214

[Close]
BLAST of Spg006939 vs. ExPASy TrEMBL
Match: A0A6J1E4E6 (Peptidyl-prolyl cis-trans isomerase OS=Cucurbita moschata OX=3662 GN=LOC111430505 PE=3 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 4.2e-71
Identity = 146/211 (69.19%), Postives = 158/211 (74.88%), Query Frame = 0 

Query: 1   MASAFSMGVLGTLPSPSQSKCCLRVLNSPKTRLICSSTSLVSISSQVQTMNSPVRIMTWG 60
           MASA  MGVLGTLPSPSQ + CL  L S KT+LICSSTSLV IS QV++MNSPVR +TWG
Sbjct: 4   MASAVPMGVLGTLPSPSQGRYCLPSLKSTKTQLICSSTSLVPISLQVRSMNSPVRTLTWG 63

Query: 61  SQRPSFPTLREAFPMKNRRLICVNSTAKDVELQAEVSTKCFFDVEIGGEPVGRIVIGLFG 120
           S+R SFP LREAFP+KNRRL+C N+ AKDVELQAEVSTKCFFDVEIGGEP GRIVIGLF 
Sbjct: 64  SRRSSFPILREAFPVKNRRLVCANTAAKDVELQAEVSTKCFFDVEIGGEPAGRIVIGLFA 123

Query: 121 DVVPKTVENFRALCTGK-------LEDHHLFNDLF---------------------FRDE 180
           DVVP+TVENFRALCTG+          H +  D                       FRDE
Sbjct: 124 DVVPRTVENFRALCTGEKGYGYKGCSFHRVIKDFMIQGGDFTNGDGTGGISIYGPSFRDE 183

Query: 181 NFSLKHVGPGVLSMANAGPNTNGSQFFICTV 184
           NFSLKHVGPGVLSMANAGPNTNGSQFFICTV
Sbjct: 184 NFSLKHVGPGVLSMANAGPNTNGSQFFICTV 214

[Close]
BLAST of Spg006939 vs. ExPASy TrEMBL
Match: A0A6J1CX23 (Peptidyl-prolyl cis-trans isomerase OS=Momordica charantia OX=3673 GN=LOC111015582 PE=3 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 8.0e-70
Identity = 149/212 (70.28%), Postives = 158/212 (74.53%), Query Frame = 0 

Query: 1   MASAFSMGVLGTLPSPSQSKCCLRVLNSPKTRLICSSTSLVSISSQVQTMNSPVRIMTWG 60
           MASA SMGVL TLPSPSQ K CL  LNS KT+LICSST L SISSQVQ MNS VR +T G
Sbjct: 1   MASAVSMGVLATLPSPSQGKYCLCALNSGKTQLICSSTILASISSQVQPMNSSVRTLTRG 60

Query: 61  SQRPSFPTLREAFPMKNRRLICVNSTAKDVELQAEVSTKCFFDVEIGGEPVGRIVIGLFG 120
           SQ  SFP LREAFP KNRRLI VNSTAKDVELQAEVSTKCFFDVEIGGEP+GRI+IGLFG
Sbjct: 61  SQHSSFPILREAFPTKNRRLIRVNSTAKDVELQAEVSTKCFFDVEIGGEPIGRILIGLFG 120

Query: 121 DVVPKTVENFRALCTGK-------LEDHHLFNDLF---------------------FRDE 180
           DVVP+TVENFRALCTG+          H +  D                       FRDE
Sbjct: 121 DVVPRTVENFRALCTGEKGYGYKGCSFHRVIKDFMIQGGDFTNGDGTGGVSIYGSRFRDE 180

Query: 181 NFSLKHVGPGVLSMANAGPNTNGSQFFICTVK 185
           +FSLKHVGPGVLSMANAGP+TNGSQFFICTVK
Sbjct: 181 DFSLKHVGPGVLSMANAGPDTNGSQFFICTVK 212

[Close]
BLAST of Spg006939 vs. ExPASy TrEMBL
Match: A0A5D3BG99 (Peptidyl-prolyl cis-trans isomerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00260 PE=3 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 1.1e-63
Identity = 141/212 (66.51%), Postives = 146/212 (68.87%), Query Frame = 0 

Query: 1   MASAFSMGVLGTLPSPSQSKCCLRVLNSPKTRLICSSTSLVSISSQVQTMNSPVRIMTWG 60
           MAS  SM VL TLPSPSQ KCCL             S S  SIS QVQT NSPVR +TWG
Sbjct: 1   MASIVSMTVLPTLPSPSQGKCCL------------PSFSSRSISLQVQTTNSPVRTLTWG 60

Query: 61  SQRPSFPTLREAFPMKNRRLICVNSTAKDVELQAEVSTKCFFDVEIGGEPVGRIVIGLFG 120
           SQR SFPTLREA  MKNR LICVNS  KDVELQAEVSTKCFFDVEIGGEPVGRIVIGLFG
Sbjct: 61  SQRLSFPTLREASAMKNRTLICVNSATKDVELQAEVSTKCFFDVEIGGEPVGRIVIGLFG 120

Query: 121 DVVPKTVENFRALCTGK-------LEDHHLFNDLF---------------------FRDE 180
           D+VP+TVENFRALCTG+          H +  D                       FRDE
Sbjct: 121 DIVPRTVENFRALCTGEKGYGYKGCSFHRVIKDFMIQGGDFTNGDGTGGVSIYGPSFRDE 180

Query: 181 NFSLKHVGPGVLSMANAGPNTNGSQFFICTVK 185
           NFSLKHVGPGVLSMANAGPNTNGSQFFICTVK
Sbjct: 181 NFSLKHVGPGVLSMANAGPNTNGSQFFICTVK 200

[Close]
BLAST of Spg006939 vs. ExPASy TrEMBL
Match: A0A1S3CQQ3 (Peptidyl-prolyl cis-trans isomerase OS=Cucumis melo OX=3656 GN=LOC103503694 PE=3 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 2.5e-63
Identity = 141/212 (66.51%), Postives = 145/212 (68.40%), Query Frame = 0 

Query: 1   MASAFSMGVLGTLPSPSQSKCCLRVLNSPKTRLICSSTSLVSISSQVQTMNSPVRIMTWG 60
           MAS  SM VL TLPSPSQ KCCL             S S  SIS QVQT NSPVR +TWG
Sbjct: 1   MASIVSMTVLPTLPSPSQGKCCL------------PSFSSRSISLQVQTTNSPVRTLTWG 60

Query: 61  SQRPSFPTLREAFPMKNRRLICVNSTAKDVELQAEVSTKCFFDVEIGGEPVGRIVIGLFG 120
           SQR SFPTLREA  MKNR LICVNS  KDVELQAEVSTKCFFDVEIGGEPVGRIVIGLFG
Sbjct: 61  SQRLSFPTLREASAMKNRTLICVNSATKDVELQAEVSTKCFFDVEIGGEPVGRIVIGLFG 120

Query: 121 DVVPKTVENFRALCTGK-------LEDHHLFNDLF---------------------FRDE 180
           DVVP+TVENFRALCTG+          H +  D                       FRDE
Sbjct: 121 DVVPRTVENFRALCTGEKGYGYKGCSFHRVIKDFMIQGGDFTNGDGTGGVSIYGPSFRDE 180

Query: 181 NFSLKHVGPGVLSMANAGPNTNGSQFFICTVK 185
           NFSLKH GPGVLSMANAGPNTNGSQFFICTVK
Sbjct: 181 NFSLKHAGPGVLSMANAGPNTNGSQFFICTVK 200

[Close]
BLAST of Spg006939 vs. TAIR 10
Match: AT3G62030.3 (rotamase CYP 4 )

HSP 1 Score: 143.3 bits (360), Expect = 2.4e-34
Identity = 77/146 (52.74%), Postives = 92/146 (63.01%), Query Frame = 0 

Query: 76  KNRRLICVNSTAKD---VELQAEVSTKCFFDVEIGGEPVGRIVIGLFGDVVPKTVENFRA 135
           K++R  CV S A +   +E QA+V+ K +FDVEIGGE  GRIV+GLFG+VVPKTVENFRA
Sbjct: 69  KHQRTACVKSMAAEEEVIEPQAKVTNKVYFDVEIGGEVAGRIVMGLFGEVVPKTVENFRA 128

Query: 136 LCTGKLE-------DHHLFNDLF---------------------FRDENFSLKHVGPGVL 191
           LCTG+ +        H +  D                       F DENF+LKH GPG+L
Sbjct: 129 LCTGEKKYGYKGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGAKFEDENFTLKHTGPGIL 188

[Close]
BLAST of Spg006939 vs. TAIR 10
Match: AT3G62030.1 (rotamase CYP 4 )

HSP 1 Score: 142.9 bits (359), Expect = 3.1e-34
Identity = 77/147 (52.38%), Postives = 92/147 (62.59%), Query Frame = 0 

Query: 76  KNRRLICVNSTAKD----VELQAEVSTKCFFDVEIGGEPVGRIVIGLFGDVVPKTVENFR 135
           K++R  CV S A +    +E QA+V+ K +FDVEIGGE  GRIV+GLFG+VVPKTVENFR
Sbjct: 69  KHQRTACVKSMAAEEEEVIEPQAKVTNKVYFDVEIGGEVAGRIVMGLFGEVVPKTVENFR 128

Query: 136 ALCTGKLE-------DHHLFNDLF---------------------FRDENFSLKHVGPGV 191
           ALCTG+ +        H +  D                       F DENF+LKH GPG+
Sbjct: 129 ALCTGEKKYGYKGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGAKFEDENFTLKHTGPGI 188

[Close]
BLAST of Spg006939 vs. TAIR 10
Match: AT3G62030.2 (rotamase CYP 4 )

HSP 1 Score: 142.9 bits (359), Expect = 3.1e-34
Identity = 77/147 (52.38%), Postives = 92/147 (62.59%), Query Frame = 0 

Query: 76  KNRRLICVNSTAKD----VELQAEVSTKCFFDVEIGGEPVGRIVIGLFGDVVPKTVENFR 135
           K++R  CV S A +    +E QA+V+ K +FDVEIGGE  GRIV+GLFG+VVPKTVENFR
Sbjct: 122 KHQRTACVKSMAAEEEEVIEPQAKVTNKVYFDVEIGGEVAGRIVMGLFGEVVPKTVENFR 181

Query: 136 ALCTGKLE-------DHHLFNDLF---------------------FRDENFSLKHVGPGV 191
           ALCTG+ +        H +  D                       F DENF+LKH GPG+
Sbjct: 182 ALCTGEKKYGYKGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGAKFEDENFTLKHTGPGI 241

[Close]
BLAST of Spg006939 vs. TAIR 10
Match: AT5G13120.1 (cyclophilin 20-2 )

HSP 1 Score: 127.1 bits (318), Expect = 1.8e-29
Identity = 81/194 (41.75%), Postives = 107/194 (55.15%), Query Frame = 0 

Query: 26  LNSPKTRLICSSTSLVSISSQVQTMNSPVRIMTWGSQRP---SFPTLREAFPMKNRRLIC 85
           L++P  RL   +TS  + +S      S    +++ S  P   S   L  ++  +N R   
Sbjct: 14  LSAPPRRLSPINTSAFTSTSFRLRTKSSFDSISFSSSTPFSASSLLLHTSYTKRNHRCFS 73

Query: 86  VNSTAKDV-ELQAEVSTKCFFDVEIG---GEPVGRIVIGLFGDVVPKTVENFRALCTGK- 145
           V S A+ V E Q++++ K +FD+ +G   G+  GRIVIGL+GD VP+TVENFRALCTG+ 
Sbjct: 74  VQSNAEVVTEPQSKITHKVYFDISVGNPVGKLAGRIVIGLYGDDVPQTVENFRALCTGEK 133

Query: 146 ------LEDHHLFNDLF---------------------FRDENFSLKHVGPGVLSMANAG 185
                    H +  D                       F+DENF L HVGPGVLSMANAG
Sbjct: 134 GFGYKGSTFHRVIRDFMIQGGDFEKGNGTGGKSVYGRTFKDENFKLSHVGPGVLSMANAG 193

[Close]
BLAST of Spg006939 vs. TAIR 10
Match: AT5G13120.2 (cyclophilin 20-2 )

HSP 1 Score: 127.1 bits (318), Expect = 1.8e-29
Identity = 81/194 (41.75%), Postives = 107/194 (55.15%), Query Frame = 0 

Query: 26  LNSPKTRLICSSTSLVSISSQVQTMNSPVRIMTWGSQRP---SFPTLREAFPMKNRRLIC 85
           L++P  RL   +TS  + +S      S    +++ S  P   S   L  ++  +N R   
Sbjct: 10  LSAPPRRLSPINTSAFTSTSFRLRTKSSFDSISFSSSTPFSASSLLLHTSYTKRNHRCFS 69

Query: 86  VNSTAKDV-ELQAEVSTKCFFDVEIG---GEPVGRIVIGLFGDVVPKTVENFRALCTGK- 145
           V S A+ V E Q++++ K +FD+ +G   G+  GRIVIGL+GD VP+TVENFRALCTG+ 
Sbjct: 70  VQSNAEVVTEPQSKITHKVYFDISVGNPVGKLAGRIVIGLYGDDVPQTVENFRALCTGEK 129

Query: 146 ------LEDHHLFNDLF---------------------FRDENFSLKHVGPGVLSMANAG 185
                    H +  D                       F+DENF L HVGPGVLSMANAG
Sbjct: 130 GFGYKGSTFHRVIRDFMIQGGDFEKGNGTGGKSVYGRTFKDENFKLSHVGPGVLSMANAG 189

The following BLAST results are available for this feature:
BLAST of Spg006939 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6601925.11.6e-7270.14Peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic, partial [Cucurbita a... [more]
XP_038875165.16.1e-7270.28peptidyl-prolyl cis-trans isomerase A1 [Benincasa hispida][more]
XP_023512430.17.9e-7269.67peptidyl-prolyl cis-trans isomerase A1 [Cucurbita pepo subsp. pepo][more]
XP_022990158.13.0e-7170.14peptidyl-prolyl cis-trans isomerase A1 [Cucurbita maxima][more]
XP_022922541.18.7e-7169.19peptidyl-prolyl cis-trans isomerase A1 [Cucurbita moschata][more]
BLAST of Spg006939 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P347914.4e-3352.38Peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic OS=Arabidopsis thalia... [more]
Q416516.0e-3051.41Peptidyl-prolyl cis-trans isomerase, chloroplastic OS=Vicia faba OX=3906 PE=1 SV... [more]
Q9ASS62.5e-2841.75Photosynthetic NDH subunit of lumenal location 5, chloroplastic OS=Arabidopsis t... [more]
P0CP797.5e-2545.52Peptidyl-prolyl cis-trans isomerase B OS=Cryptococcus neoformans var. neoformans... [more]
P0CP787.5e-2545.52Peptidyl-prolyl cis-trans isomerase B OS=Cryptococcus neoformans var. neoformans... [more]
BLAST of Spg006939 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JSG21.5e-7170.14Peptidyl-prolyl cis-trans isomerase OS=Cucurbita maxima OX=3661 GN=LOC111487130 ... [more]
A0A6J1E4E64.2e-7169.19Peptidyl-prolyl cis-trans isomerase OS=Cucurbita moschata OX=3662 GN=LOC11143050... [more]
A0A6J1CX238.0e-7070.28Peptidyl-prolyl cis-trans isomerase OS=Momordica charantia OX=3673 GN=LOC1110155... [more]
A0A5D3BG991.1e-6366.51Peptidyl-prolyl cis-trans isomerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A1S3CQQ32.5e-6366.51Peptidyl-prolyl cis-trans isomerase OS=Cucumis melo OX=3656 GN=LOC103503694 PE=3... [more]
BLAST of Spg006939 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G62030.32.4e-3452.74rotamase CYP 4 [more]
AT3G62030.13.1e-3452.38rotamase CYP 4 [more]
AT3G62030.23.1e-3452.38rotamase CYP 4 [more]
AT5G13120.11.8e-2941.75cyclophilin 20-2 [more]
AT5G13120.21.8e-2941.75cyclophilin 20-2 [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029000Cyclophilin-like domain superfamilyGENE3D2.40.100.10coord: 147..195
e-value: 3.6E-14
score: 54.8
IPR029000Cyclophilin-like domain superfamilyGENE3D2.40.100.10coord: 85..146
e-value: 5.1E-17
score: 64.1
IPR029000Cyclophilin-like domain superfamilySUPERFAMILY50891Cyclophilin-likecoord: 94..185
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPFAMPF00160Pro_isomerasecoord: 149..188
e-value: 8.4E-9
score: 35.9
coord: 102..140
e-value: 1.2E-5
score: 25.6
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPROSITEPS50072CSA_PPIASE_2coord: 101..203
score: 16.371103
NoneNo IPR availablePANTHERPTHR11071:SF420PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP20-3, CHLOROPLASTICcoord: 149..188
NoneNo IPR availablePANTHERPTHR11071PEPTIDYL-PROLYL CIS-TRANS ISOMERASEcoord: 149..188
NoneNo IPR availablePANTHERPTHR11071:SF420PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP20-3, CHLOROPLASTICcoord: 51..137
NoneNo IPR availablePANTHERPTHR11071PEPTIDYL-PROLYL CIS-TRANS ISOMERASEcoord: 51..137

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg006939.1Spg006939.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000413 protein peptidyl-prolyl isomerization
cellular_component GO:0110165 cellular anatomical entity
molecular_function GO:0003755 peptidyl-prolyl cis-trans isomerase activity