Spg006879 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg006879
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionsodium/hydrogen exchanger 8 isoform X1
Locationscaffold10: 40129395 .. 40129867 (-)
RNA-Seq ExpressionSpg006879
SyntenySpg006879
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGGAGGAGCAGGTTATTTTAGTTTAGGCCTCAAAACGTACATCTCTCTCTAGTTTGGCTATTAATCATTTCTTCAAGGATATCTGTACAAATTTGGATGCATGTACATCCCCGGCTTTTTTTTTTTTTCTCCCTTCTAATTATCTTTTCACTCCTATCTGTTCCAAAAAGAAAAGTTATCTTTTCACTCTTTTTGGGAGTTCGTACCCCTTGAATATTTTTGTTCCTTTTCATTTATCAATGAAAATTTCATGTCACAGGAGCTTCATGGGGCTTCCTCATTCTGCTTTATGCATATGTGCAAGCTTCTCGAGTTATGGTTGTTGGAGTACTGTATCCATTTCTGCGGTATTTTGGATATGGTTTGGATTGGAAAGAAGCTACAATACTGATATGGTCAGGTCTGCGTGGAGCTGTTGCCCTGTCACTTTCACTGTCAGTTAAGGCAAGCCTTTCAAATCAATGCTAA

mRNA sequence

ATGTTTGGAGGAGCAGGAGCTTCATGGGGCTTCCTCATTCTGCTTTATGCATATGTGCAAGCTTCTCGAGTTATGGTTGTTGGAGTACTGTATCCATTTCTGCGGTATTTTGGATATGGTTTGGATTGGAAAGAAGCTACAATACTGATATGGTCAGGTCTGCGTGGAGCTGTTGCCCTGTCACTTTCACTGTCAGTTAAGGCAAGCCTTTCAAATCAATGCTAA

Coding sequence (CDS)

ATGTTTGGAGGAGCAGGAGCTTCATGGGGCTTCCTCATTCTGCTTTATGCATATGTGCAAGCTTCTCGAGTTATGGTTGTTGGAGTACTGTATCCATTTCTGCGGTATTTTGGATATGGTTTGGATTGGAAAGAAGCTACAATACTGATATGGTCAGGTCTGCGTGGAGCTGTTGCCCTGTCACTTTCACTGTCAGTTAAGGCAAGCCTTTCAAATCAATGCTAA

Protein sequence

MFGGAGASWGFLILLYAYVQASRVMVVGVLYPFLRYFGYGLDWKEATILIWSGLRGAVALSLSLSVKASLSNQC
Homology
[Close]
BLAST of Spg006879 vs. NCBI nr
Match: XP_023525790.1 (sodium/hydrogen exchanger 7 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 121.3 bits (303), Expect = 3.5e-24
Identity = 61/64 (95.31%), Postives = 62/64 (96.88%), Query Frame = 0 

Query: 6   GASWGFLILLYAYVQASRVMVVGVLYPFLRYFGYGLDWKEATILIWSGLRGAVALSLSLS 65
           GASWGFLILLYAYVQASRVMVVGVLYPFLRYFGYGLDWKEATIL WSGLRGAVAL+LSLS
Sbjct: 147 GASWGFLILLYAYVQASRVMVVGVLYPFLRYFGYGLDWKEATILTWSGLRGAVALALSLS 206

Query: 66  VKAS 70
           VK S
Sbjct: 207 VKRS 210

[Close]
BLAST of Spg006879 vs. NCBI nr
Match: XP_022955963.1 (sodium/hydrogen exchanger 7 isoform X3 [Cucurbita moschata])

HSP 1 Score: 121.3 bits (303), Expect = 3.5e-24
Identity = 61/64 (95.31%), Postives = 62/64 (96.88%), Query Frame = 0 

Query: 6   GASWGFLILLYAYVQASRVMVVGVLYPFLRYFGYGLDWKEATILIWSGLRGAVALSLSLS 65
           GASWGFLILLYAYVQASRVMVVGVLYPFLRYFGYGLDWKEATIL WSGLRGAVAL+LSLS
Sbjct: 135 GASWGFLILLYAYVQASRVMVVGVLYPFLRYFGYGLDWKEATILTWSGLRGAVALALSLS 194

Query: 66  VKAS 70
           VK S
Sbjct: 195 VKRS 198

[Close]
BLAST of Spg006879 vs. NCBI nr
Match: XP_022955949.1 (sodium/hydrogen exchanger 8 isoform X1 [Cucurbita moschata])

HSP 1 Score: 121.3 bits (303), Expect = 3.5e-24
Identity = 61/64 (95.31%), Postives = 62/64 (96.88%), Query Frame = 0 

Query: 6   GASWGFLILLYAYVQASRVMVVGVLYPFLRYFGYGLDWKEATILIWSGLRGAVALSLSLS 65
           GASWGFLILLYAYVQASRVMVVGVLYPFLRYFGYGLDWKEATIL WSGLRGAVAL+LSLS
Sbjct: 342 GASWGFLILLYAYVQASRVMVVGVLYPFLRYFGYGLDWKEATILTWSGLRGAVALALSLS 401

Query: 66  VKAS 70
           VK S
Sbjct: 402 VKRS 405

[Close]
BLAST of Spg006879 vs. NCBI nr
Match: KAG7032601.1 (Sodium/hydrogen exchanger 7 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 121.3 bits (303), Expect = 3.5e-24
Identity = 61/64 (95.31%), Postives = 62/64 (96.88%), Query Frame = 0 

Query: 6  GASWGFLILLYAYVQASRVMVVGVLYPFLRYFGYGLDWKEATILIWSGLRGAVALSLSLS 65
          GASWGFLILLYAYVQASRVMVVGVLYPFLRYFGYGLDWKEATIL WSGLRGAVAL+LSLS
Sbjct: 32 GASWGFLILLYAYVQASRVMVVGVLYPFLRYFGYGLDWKEATILTWSGLRGAVALALSLS 91

Query: 66 VKAS 70
          VK S
Sbjct: 92 VKRS 95

[Close]
BLAST of Spg006879 vs. NCBI nr
Match: XP_022955956.1 (sodium/hydrogen exchanger 7 isoform X2 [Cucurbita moschata])

HSP 1 Score: 121.3 bits (303), Expect = 3.5e-24
Identity = 61/64 (95.31%), Postives = 62/64 (96.88%), Query Frame = 0 

Query: 6   GASWGFLILLYAYVQASRVMVVGVLYPFLRYFGYGLDWKEATILIWSGLRGAVALSLSLS 65
           GASWGFLILLYAYVQASRVMVVGVLYPFLRYFGYGLDWKEATIL WSGLRGAVAL+LSLS
Sbjct: 147 GASWGFLILLYAYVQASRVMVVGVLYPFLRYFGYGLDWKEATILTWSGLRGAVALALSLS 206

Query: 66  VKAS 70
           VK S
Sbjct: 207 VKRS 210

[Close]
BLAST of Spg006879 vs. ExPASy Swiss-Prot
Match: Q9LKW9 (Sodium/hydrogen exchanger 7 OS=Arabidopsis thaliana OX=3702 GN=NHX7 PE=1 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 1.4e-20
Identity = 50/67 (74.63%), Postives = 55/67 (82.09%), Query Frame = 0 

Query: 6   GASWGFLILLYAYVQASRVMVVGVLYPFLRYFGYGLDWKEATILIWSGLRGAVALSLSLS 65
           G SW FL LLY Y+Q SRV+VVGVLYP L  FGYGLDWKE+ IL+WSGLRGAVAL+LSLS
Sbjct: 348 GNSWRFLFLLYVYIQLSRVVVVGVLYPLLCRFGYGLDWKESIILVWSGLRGAVALALSLS 407

Query: 66  VKASLSN 73
           VK S  N
Sbjct: 408 VKQSSGN 414

[Close]
BLAST of Spg006879 vs. ExPASy Swiss-Prot
Match: Q3YL57 (Sodium/hydrogen exchanger 8 OS=Arabidopsis thaliana OX=3702 GN=NHX8 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 1.7e-18
Identity = 48/67 (71.64%), Postives = 52/67 (77.61%), Query Frame = 0 

Query: 6   GASWGFLILLYAYVQASRVMVVGVLYPFLRYFGYGLDWKEATILIWSGLRGAVALSLSLS 65
           G SW FL LLY YVQ SR +VVGVLYP L   GYGLDWKE+ IL WSGLRGAV+LSL+LS
Sbjct: 346 GNSWSFLFLLYLYVQLSRCVVVGVLYPLLCRSGYGLDWKESIILTWSGLRGAVSLSLALS 405

Query: 66  VKASLSN 73
           VK S  N
Sbjct: 406 VKQSSGN 412

[Close]
BLAST of Spg006879 vs. ExPASy TrEMBL
Match: A0A6J1GXP6 (sodium/hydrogen exchanger 8 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457781 PE=3 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.7e-24
Identity = 61/64 (95.31%), Postives = 62/64 (96.88%), Query Frame = 0 

Query: 6   GASWGFLILLYAYVQASRVMVVGVLYPFLRYFGYGLDWKEATILIWSGLRGAVALSLSLS 65
           GASWGFLILLYAYVQASRVMVVGVLYPFLRYFGYGLDWKEATIL WSGLRGAVAL+LSLS
Sbjct: 342 GASWGFLILLYAYVQASRVMVVGVLYPFLRYFGYGLDWKEATILTWSGLRGAVALALSLS 401

Query: 66  VKAS 70
           VK S
Sbjct: 402 VKRS 405

[Close]
BLAST of Spg006879 vs. ExPASy TrEMBL
Match: A0A6J1GVG1 (sodium/hydrogen exchanger 7 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111457781 PE=3 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.7e-24
Identity = 61/64 (95.31%), Postives = 62/64 (96.88%), Query Frame = 0 

Query: 6   GASWGFLILLYAYVQASRVMVVGVLYPFLRYFGYGLDWKEATILIWSGLRGAVALSLSLS 65
           GASWGFLILLYAYVQASRVMVVGVLYPFLRYFGYGLDWKEATIL WSGLRGAVAL+LSLS
Sbjct: 135 GASWGFLILLYAYVQASRVMVVGVLYPFLRYFGYGLDWKEATILTWSGLRGAVALALSLS 194

Query: 66  VKAS 70
           VK S
Sbjct: 195 VKRS 198

[Close]
BLAST of Spg006879 vs. ExPASy TrEMBL
Match: A0A6J1GV93 (sodium/hydrogen exchanger 7 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457781 PE=3 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.7e-24
Identity = 61/64 (95.31%), Postives = 62/64 (96.88%), Query Frame = 0 

Query: 6   GASWGFLILLYAYVQASRVMVVGVLYPFLRYFGYGLDWKEATILIWSGLRGAVALSLSLS 65
           GASWGFLILLYAYVQASRVMVVGVLYPFLRYFGYGLDWKEATIL WSGLRGAVAL+LSLS
Sbjct: 147 GASWGFLILLYAYVQASRVMVVGVLYPFLRYFGYGLDWKEATILTWSGLRGAVALALSLS 206

Query: 66  VKAS 70
           VK S
Sbjct: 207 VKRS 210

[Close]
BLAST of Spg006879 vs. ExPASy TrEMBL
Match: A0A6J1JNG7 (sodium/hydrogen exchanger 8 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111486905 PE=3 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 4.9e-24
Identity = 60/64 (93.75%), Postives = 62/64 (96.88%), Query Frame = 0 

Query: 6   GASWGFLILLYAYVQASRVMVVGVLYPFLRYFGYGLDWKEATILIWSGLRGAVALSLSLS 65
           GASWGFLILLYAYVQASRV+VVGVLYPFLRYFGYGLDWKEATIL WSGLRGAVAL+LSLS
Sbjct: 342 GASWGFLILLYAYVQASRVIVVGVLYPFLRYFGYGLDWKEATILTWSGLRGAVALALSLS 401

Query: 66  VKAS 70
           VK S
Sbjct: 402 VKRS 405

[Close]
BLAST of Spg006879 vs. ExPASy TrEMBL
Match: A0A6J1JL99 (sodium/hydrogen exchanger 7 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111486905 PE=3 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 4.9e-24
Identity = 60/64 (93.75%), Postives = 62/64 (96.88%), Query Frame = 0 

Query: 6   GASWGFLILLYAYVQASRVMVVGVLYPFLRYFGYGLDWKEATILIWSGLRGAVALSLSLS 65
           GASWGFLILLYAYVQASRV+VVGVLYPFLRYFGYGLDWKEATIL WSGLRGAVAL+LSLS
Sbjct: 147 GASWGFLILLYAYVQASRVIVVGVLYPFLRYFGYGLDWKEATILTWSGLRGAVALALSLS 206

Query: 66  VKAS 70
           VK S
Sbjct: 207 VKRS 210

[Close]
BLAST of Spg006879 vs. TAIR 10
Match: AT2G01980.1 (sodium proton exchanger, putative (NHX7) (SOS1) )

HSP 1 Score: 99.8 bits (247), Expect = 1.0e-21
Identity = 50/67 (74.63%), Postives = 55/67 (82.09%), Query Frame = 0 

Query: 6   GASWGFLILLYAYVQASRVMVVGVLYPFLRYFGYGLDWKEATILIWSGLRGAVALSLSLS 65
           G SW FL LLY Y+Q SRV+VVGVLYP L  FGYGLDWKE+ IL+WSGLRGAVAL+LSLS
Sbjct: 348 GNSWRFLFLLYVYIQLSRVVVVGVLYPLLCRFGYGLDWKESIILVWSGLRGAVALALSLS 407

Query: 66  VKASLSN 73
           VK S  N
Sbjct: 408 VKQSSGN 414

[Close]
BLAST of Spg006879 vs. TAIR 10
Match: AT1G14660.1 (Na+/H+ exchanger 8 )

HSP 1 Score: 92.8 bits (229), Expect = 1.2e-19
Identity = 48/67 (71.64%), Postives = 52/67 (77.61%), Query Frame = 0 

Query: 6   GASWGFLILLYAYVQASRVMVVGVLYPFLRYFGYGLDWKEATILIWSGLRGAVALSLSLS 65
           G SW FL LLY YVQ SR +VVGVLYP L   GYGLDWKE+ IL WSGLRGAV+LSL+LS
Sbjct: 346 GNSWSFLFLLYLYVQLSRCVVVGVLYPLLCRSGYGLDWKESIILTWSGLRGAVSLSLALS 405

Query: 66  VKASLSN 73
           VK S  N
Sbjct: 406 VKQSSGN 412

The following BLAST results are available for this feature:
BLAST of Spg006879 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023525790.13.5e-2495.31sodium/hydrogen exchanger 7 isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_022955963.13.5e-2495.31sodium/hydrogen exchanger 7 isoform X3 [Cucurbita moschata][more]
XP_022955949.13.5e-2495.31sodium/hydrogen exchanger 8 isoform X1 [Cucurbita moschata][more]
KAG7032601.13.5e-2495.31Sodium/hydrogen exchanger 7 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022955956.13.5e-2495.31sodium/hydrogen exchanger 7 isoform X2 [Cucurbita moschata][more]
BLAST of Spg006879 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LKW91.4e-2074.63Sodium/hydrogen exchanger 7 OS=Arabidopsis thaliana OX=3702 GN=NHX7 PE=1 SV=1[more]
Q3YL571.7e-1871.64Sodium/hydrogen exchanger 8 OS=Arabidopsis thaliana OX=3702 GN=NHX8 PE=2 SV=1[more]
BLAST of Spg006879 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GXP61.7e-2495.31sodium/hydrogen exchanger 8 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC11145... [more]
A0A6J1GVG11.7e-2495.31sodium/hydrogen exchanger 7 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC11145... [more]
A0A6J1GV931.7e-2495.31sodium/hydrogen exchanger 7 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC11145... [more]
A0A6J1JNG74.9e-2493.75sodium/hydrogen exchanger 8 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1114869... [more]
A0A6J1JL994.9e-2493.75sodium/hydrogen exchanger 7 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1114869... [more]
BLAST of Spg006879 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G01980.11.0e-2174.63sodium proton exchanger, putative (NHX7) (SOS1) [more]
AT1G14660.11.2e-1971.64Na+/H+ exchanger 8 [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006153Cation/H+ exchangerPFAMPF00999Na_H_Exchangercoord: 7..73
e-value: 7.8E-9
score: 34.8
IPR018422Cation/H+ exchanger, CPA1 familyPANTHERPTHR10110SODIUM/HYDROGEN EXCHANGERcoord: 4..69
NoneNo IPR availablePANTHERPTHR10110:SF170SUBFAMILY NOT NAMEDcoord: 4..69

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg006879.1Spg006879.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0098656 anion transmembrane transport
biological_process GO:0071805 potassium ion transmembrane transport
biological_process GO:1902600 proton transmembrane transport
biological_process GO:0051453 regulation of intracellular pH
biological_process GO:0098719 sodium ion import across plasma membrane
biological_process GO:0006812 cation transport
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane
molecular_function GO:0015386 potassium:proton antiporter activity
molecular_function GO:0015385 sodium:proton antiporter activity
molecular_function GO:0015299 solute:proton antiporter activity