Spg006865 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg006865
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	zinc finger CCCH domain-containing protein 1
Location	scaffold10: 39099372 .. 39102979 (-)
RNA-Seq Expression	Spg006865
Synteny	Spg006865

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTTTTTGTTGACCCATACATTACAATTGAGGAATAGAAGGAAAATGAAAAACCCTAATTTCCTTTTTTATGTTTAATTCGGCGACTTCCCTTTATCTCTCACTCCGCCGGCGACGCTAGGTCCTTCGACCACCTCTCTTCCGAAGCGACGAAACAGATCCCAGCGACGACGTTCTTCCCTTTGGCAGCGAACTCGGACTCGCAACGGGCACCGAGCAGACGAGCAGATACGGCGGCGGTGGCGTTGATAGACCCTTGAACGACCAGCAGTGAGCGGGGAGAGTCACGGCGGCGCGACCTCTCGATTTGCGACGGTGAGCCTAGATCTGACGCCACTATTCCTAGTCACAACCCAGCCAATGGTACAAAGCCCTCGTTGCCCATTGTGGTCATTGGAGAGCTTGAGAGATAAGTTAATTCAACTTGTTCTTTCTTGTTTTCCATTGTAGCATCTATTCTGAATCCGGCTGGTCTTACTCGTATACAATGACAGATACAGGTGAAAATCAGCAGCCTGAACAAGGTATTAGCGATTATTGTTCCATCCAAATTTTTTTTTTTATGTGTATATATAAATTTCCCCGTTTTCATCATGACTTCTTTTTTTATATTTACAATTTTTCTGATAGTAGTCGTTCTCTATACGTTTTTAACCCTTTGATCTTCAGTCTGTAGCTTCTTCAGAAAACCCACGAAGAATAAAAACATCAGAAAACGGACGGTTGATGAAGATGAAGAGGAGGACTCTAAAACTGAGACTTCGTTCCTGGCTAATCAGAAAAAAGCTCCCAAGACTGAGAGCAAGCTTTATTTCTCTTCTGGACCCTCAAAAAGTTCCTTGTCTAATGAGTCAAATGCGGAGCCTGAAAAACCAATTTTCCAATTTGAGTCTTCAAAAGAAATTCAAGTTCACCATGACAGCAGAGCAACTGCAACTCTGGAAACAGAGACTGAGTTCTCAAGAGATGCACGAGCTATCCGTGAGAGAGTTTTGAAGCAAGCTGAGGAGGCTTTGAAGGGAAAAGGCAAGAGTTCTGGGGGTGAGAAGTTGTATAAAGGGGTCAATGCTTATGTGGATTACAAGGCTGGCTTTAGAAGGGAACACACAATTTCAAGTGAAAAAGCTGGTGGAGCACACGGGCCGCTTAGAGCTTCTGCTCATATAAGAGCTTCAGCAAGATTTGATTATCAGCCTGATATTTGCAAGGATTACAAGGAGACTGGTTACTGTGGTTATGGAGATGCATGCAAGTTTATGCATGACCGAGGGGATTACAAATCTGGGTGGCAGTTGGAAAAGGAATGGGAGGAAGTAGAGAAAGCAAGGAAGAGAAAATTAGCTATGGGTTCTGATGATGGGGATGAGGATGCTGCAGAACAGAGTGATGAAGATGATGAAGATGCCCTTCCCTTCGCTTGTTTTATTTGCCGTGAGCCATTTGTGGACCCTGTTGTGACCAAGTGCAAACATTACTTCTGTGAACACTGTGCGCTAAAGGTAATCGCTCTTTATTGGTCTTAATTATGTTTTAATTTCCTTAGCATTGTATATCTGGTGATCATGAAGTCCTTTCTTCTCTGGGAGGTTGAATTTGCTTCAGAATTCAAGTCTACCGATTATTATCTTTTCTGTATAGAATTTTCCTATTATATATTGCAATTTAAAGGTTTCCCCACAATGCAATTTGAATTTAGTTGAGGAACGTATATAGAGAACGTTGTGAGGTGGCTGAAGCATTAGGATAATTTTTCTGCAAGTGTGGCAATTGTTTCACTGATGTTGAGTTAATGTCTTTGCATGTCTAGAGTTATGACTGCAGAAGCTTTGTATATATTCTTAATTTGTTTCTCTAGAGCACACTTTTAGATAATCATTACATCCTACTTCATGACACATTTCGTTCTTTTCTTTTTTCCTGGTATTTCATGTTCCATATCTTGTCTCGGGAATGAATCTAAAATCTTTTTTTTATATCAATTTGCAGCACCATGCAAAGAATAAGAAATGCTTCGTTTGCAACCAGCCTACGCTTGGAATCTTTAACACGGCTCATGAGATACGGAAAAAGATGGCACAAAGTAAATAAGTTTTTTCCTTGACCTGCATTGTTCCCTTCTCACAGTTTTCAGATTGTAGCAGTATGATCTTTCTTCTTCCTTGTTTTTTATGAGGAAGTCCAGTTTCCAATATCTATTTCTTGAAGCTTACGATCAAGACCTGTTGCAGCATGAGCTTGGAGAAGCTTGGATACTATTTTCTTGAAATATGGGAATTTATCAGTTTTAGAAGTAGTTTTGCCATTTCCAATTTATCGGTTTCTCTGTATTCCATGATCTTTTTTGTAAATATCCTGAAATCCTTCAACGTACTTGGTGTTCCTCTTCCTCCAGCTTAAAATTAAAAACTACTCTGACTGTATAACGTGAGATAGATAGTATTCAATGTAGATTGTCCGAAGGGGTTTCTAACCAGGACTCTTTGTTGAACTCAAGAGTGTTTCTAATATGTGCAGCCTTTAGACTGGATGGCATCAAGATATGTACCCAAATTTTATTTTGTTTGTATTTGCAAATTTTCATTGGCACTTTTCAGGGATCATACGAATATGAGAATAACAGGAACTTGCCCTCGTGCAACTCTTAGAAAAATGTGTGTTGAAAATGTCTTTTGACTTTAAATTTATGAACTTTTGGTGATTGGCTTTGATCATATTTGCTCTTTTACCCCCTTTTTTGCAACTTTTGATTTATAATTATTGGAACTTTATGTGTTTTTTTCCCTTGTAATTGGTTCTTTTCTCATTGAAGGTCTGTTCATATCTACCCTAGGTTACTGATTGTTAAAGTATTTTGATAGTTATTTTAAAACCTCACAAAATTCTTAGGTATCACATGTGAATTGCCTCAAACATCTTCTTTCACACATGTTAAGCACAAGAGAGAGATTGTTTCTAGTTCTTTCTTTTTCTTTTGGCCTACAGATGTAAAATTAGTAGTTTGATTAAATTGGTGAATGTACAGAGCGATTTTTAGATGTTAATTTATGCAATGCTTTAGTAACAACAAAACTTTAGATAGATTAGTATTCTATGGTTGAGTGCTTGTCTTTCCATCATTTTACCCATGGTTTTGAAGGTTTAGATGAATCAGACACTAGCCTGTTCCATTAAGTACACTGTTATTGAGCACCTTTAGAATGTGATGGCTCATGTGGAAAGTGAGAAGTAATGGATGGAGCTGGTTATGATCCGAGGTATTGTCTTGCTGCCTGAGATTTAAGGGATACGGATTGATTTTCTCAAAAGTTACAGAGGGATAGATAAAGAGCTTGAAAAGGATTGGGATTGACAGTGCCAGCACATGCAGGTGATCTGAATGTGAGATTGATCGGTGAATATTCCTGTAGACGCATTGCAATTCTACTTGAATCAGATAAGTACATTGTCAAGTTTTAATTTACTTTTCATGGGTATATATATATATCAAAGAAACTAGTGGAAATTCTTATGGAGTCTGAAGATCCCTAAAAGAGTAACAATTTTCATGTGGTGAGTTTTTCACTGGTGTTTACCGTCTAATTTTTGTCTTTTTGTCAGTTATGTTTTTT

mRNA sequence

ATGACAGATACAGGTGAAAATCAGCAGCCTGAACAAGTCTGTAGCTTCTTCAGAAAACCCACGAAGAATAAAAACATCAGAAAACGGACGGTTGATGAAGATGAAGAGGAGGACTCTAAAACTGAGACTTCGTTCCTGGCTAATCAGAAAAAAGCTCCCAAGACTGAGAGCAAGCTTTATTTCTCTTCTGGACCCTCAAAAAGTTCCTTGTCTAATGAGTCAAATGCGGAGCCTGAAAAACCAATTTTCCAATTTGAGTCTTCAAAAGAAATTCAAGTTCACCATGACAGCAGAGCAACTGCAACTCTGGAAACAGAGACTGAGTTCTCAAGAGATGCACGAGCTATCCGTGAGAGAGTTTTGAAGCAAGCTGAGGAGGCTTTGAAGGGAAAAGGCAAGAGTTCTGGGGGTGAGAAGTTGTATAAAGGGGTCAATGCTTATGTGGATTACAAGGCTGGCTTTAGAAGGGAACACACAATTTCAAGTGAAAAAGCTGGTGGAGCACACGGGCCGCTTAGAGCTTCTGCTCATATAAGAGCTTCAGCAAGATTTGATTATCAGCCTGATATTTGCAAGGATTACAAGGAGACTGGTTACTGTGGTTATGGAGATGCATGCAAGTTTATGCATGACCGAGGGGATTACAAATCTGGGTGGCAGTTGGAAAAGGAATGGGAGGAAGTAGAGAAAGCAAGGAAGAGAAAATTAGCTATGGGTTCTGATGATGGGGATGAGGATGCTGCAGAACAGAGTGATGAAGATGATGAAGATGCCCTTCCCTTCGCTTGTTTTATTTGCCGTGAGCCATTTGTGGACCCTGTTGTGACCAAGTGCAAACATTACTTCTGTGAACACTGTGCGCTAAAGCACCATGCAAAGAATAAGAAATGCTTCGTTTGCAACCAGCCTACGCTTGGAATCTTTAACACGGCTCATGAGATACGGAAAAAGATGGCACAAAGTAAATAA

Coding sequence (CDS)

ATGACAGATACAGGTGAAAATCAGCAGCCTGAACAAGTCTGTAGCTTCTTCAGAAAACCCACGAAGAATAAAAACATCAGAAAACGGACGGTTGATGAAGATGAAGAGGAGGACTCTAAAACTGAGACTTCGTTCCTGGCTAATCAGAAAAAAGCTCCCAAGACTGAGAGCAAGCTTTATTTCTCTTCTGGACCCTCAAAAAGTTCCTTGTCTAATGAGTCAAATGCGGAGCCTGAAAAACCAATTTTCCAATTTGAGTCTTCAAAAGAAATTCAAGTTCACCATGACAGCAGAGCAACTGCAACTCTGGAAACAGAGACTGAGTTCTCAAGAGATGCACGAGCTATCCGTGAGAGAGTTTTGAAGCAAGCTGAGGAGGCTTTGAAGGGAAAAGGCAAGAGTTCTGGGGGTGAGAAGTTGTATAAAGGGGTCAATGCTTATGTGGATTACAAGGCTGGCTTTAGAAGGGAACACACAATTTCAAGTGAAAAAGCTGGTGGAGCACACGGGCCGCTTAGAGCTTCTGCTCATATAAGAGCTTCAGCAAGATTTGATTATCAGCCTGATATTTGCAAGGATTACAAGGAGACTGGTTACTGTGGTTATGGAGATGCATGCAAGTTTATGCATGACCGAGGGGATTACAAATCTGGGTGGCAGTTGGAAAAGGAATGGGAGGAAGTAGAGAAAGCAAGGAAGAGAAAATTAGCTATGGGTTCTGATGATGGGGATGAGGATGCTGCAGAACAGAGTGATGAAGATGATGAAGATGCCCTTCCCTTCGCTTGTTTTATTTGCCGTGAGCCATTTGTGGACCCTGTTGTGACCAAGTGCAAACATTACTTCTGTGAACACTGTGCGCTAAAGCACCATGCAAAGAATAAGAAATGCTTCGTTTGCAACCAGCCTACGCTTGGAATCTTTAACACGGCTCATGAGATACGGAAAAAGATGGCACAAAGTAAATAA

Protein sequence

MTDTGENQQPEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKTETSFLANQKKAPKTESKLYFSSGPSKSSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAIRERVLKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMGSDDGDEDAAEQSDEDDEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVCNQPTLGIFNTAHEIRKKMAQSK

Homology

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BLAST of Spg006865 vs. NCBI nr
Match: XP_022958735.1 (zinc finger CCCH domain-containing protein 1 [Cucurbita moschata])

HSP 1 Score: 615.5 bits (1586), Expect = 2.5e-172
Identity = 305/322 (94.72%), Postives = 314/322 (97.52%), Query Frame = 0


Query: 1   MTDTGENQQPEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKTETSFLANQKKAPKTESKLY 60
           MTDTGENQQPEQVCSFF+KPTKNKNIRKRTVDEDEEE   TETS L NQKKAPKT+SKLY
Sbjct: 1   MTDTGENQQPEQVCSFFKKPTKNKNIRKRTVDEDEEESKSTETSVLQNQKKAPKTDSKLY 60

Query: 61  FSSGPSKSSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAIRERV 120
           FSSGPSKS+L+NESN E +KPIFQFESSKEIQVHHDSRATATLETET+FSRDARAIRERV
Sbjct: 61  FSSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180
           LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMGS 240
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAM S
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240

Query: 241 DDGDEDAAEQSDEDDEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300
           DDGDEDAAEQSDED+EDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC
Sbjct: 241 DDGDEDAAEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300

Query: 301 NQPTLGIFNTAHEIRKKMAQSK 323
           NQPTLGIFNTAHEI+KKMA+SK
Sbjct: 301 NQPTLGIFNTAHEIKKKMAESK 322

[Close]

BLAST of Spg006865 vs. NCBI nr
Match: XP_004149426.1 (zinc finger CCCH domain-containing protein 1 [Cucumis sativus] >KGN47699.1 hypothetical protein Csa_018272 [Cucumis sativus])

HSP 1 Score: 615.1 bits (1585), Expect = 3.3e-172
Identity = 306/322 (95.03%), Postives = 312/322 (96.89%), Query Frame = 0


Query: 1   MTDTGENQQPEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKTETSFLANQKKAPKTESKLY 60
           MTDTG+ Q  EQVCSFFRKPTKNKNIRKRTVDEDEEEDSK ETSFL NQKKAPKTESKLY
Sbjct: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60

Query: 61  FSSGPSKSSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAIRERV 120
           FSSGPSK+S SNESN EP KPIFQFESSKEIQVHHDSRATATLETET+FSRDARAIRERV
Sbjct: 61  FSSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180
           LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMGS 240
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAM S
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240

Query: 241 DDGDEDAAEQSDEDDEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300
           DDGDED +EQSDED+EDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC
Sbjct: 241 DDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300

Query: 301 NQPTLGIFNTAHEIRKKMAQSK 323
           NQPTLGIFNTAHEIRK+MAQSK
Sbjct: 301 NQPTLGIFNTAHEIRKRMAQSK 322

[Close]

BLAST of Spg006865 vs. NCBI nr
Match: XP_008466746.1 (PREDICTED: zinc finger CCCH domain-containing protein 1 [Cucumis melo] >XP_008466747.1 PREDICTED: zinc finger CCCH domain-containing protein 1 [Cucumis melo])

HSP 1 Score: 613.6 bits (1581), Expect = 9.7e-172
Identity = 306/322 (95.03%), Postives = 312/322 (96.89%), Query Frame = 0


Query: 1   MTDTGENQQPEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKTETSFLANQKKAPKTESKLY 60
           MTDTG+ Q  EQVCSFFRKPTKNKNIRKRTVDEDEEEDSK ETSFL NQKKAPKTESKLY
Sbjct: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60

Query: 61  FSSGPSKSSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAIRERV 120
           FSSGPSK+SLSNESN EP KPIFQFESSKEIQVHHDSRATATLETET+FSRDARAIRERV
Sbjct: 61  FSSGPSKNSLSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180
           LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMGS 240
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAM S
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240

Query: 241 DDGDEDAAEQSDEDDEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300
           DDGDED++EQSDED+E ALPFACFICREPFVDPVVTKC HYFCEHCALKHHAKNKKCFVC
Sbjct: 241 DDGDEDSSEQSDEDEEGALPFACFICREPFVDPVVTKCGHYFCEHCALKHHAKNKKCFVC 300

Query: 301 NQPTLGIFNTAHEIRKKMAQSK 323
           NQPTLGIFNTAHEIRKKMAQSK
Sbjct: 301 NQPTLGIFNTAHEIRKKMAQSK 322

[Close]

BLAST of Spg006865 vs. NCBI nr
Match: XP_023548600.1 (zinc finger CCCH domain-containing protein 1 [Cucurbita pepo subsp. pepo] >XP_023548608.1 zinc finger CCCH domain-containing protein 1 [Cucurbita pepo subsp. pepo] >XP_023548618.1 zinc finger CCCH domain-containing protein 1 [Cucurbita pepo subsp. pepo] >KAG7032517.1 Zinc finger CCCH domain-containing protein 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 612.8 bits (1579), Expect = 1.6e-171
Identity = 303/322 (94.10%), Postives = 314/322 (97.52%), Query Frame = 0


Query: 1   MTDTGENQQPEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKTETSFLANQKKAPKTESKLY 60
           MTDTGENQQPEQVCSFF+KPTKNKNIRKRTVDEDEE+   +ETS L NQKKAPKT+SKLY
Sbjct: 1   MTDTGENQQPEQVCSFFKKPTKNKNIRKRTVDEDEEDSKSSETSVLQNQKKAPKTDSKLY 60

Query: 61  FSSGPSKSSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAIRERV 120
           FSSGPSKS+L+NESN E +KPIFQFESSKEIQVHHDSRATATLETET+FSRDARAIRERV
Sbjct: 61  FSSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180
           LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMGS 240
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAM S
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240

Query: 241 DDGDEDAAEQSDEDDEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300
           DDGDEDAAEQSDED+EDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC
Sbjct: 241 DDGDEDAAEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300

Query: 301 NQPTLGIFNTAHEIRKKMAQSK 323
           NQPTLGIFNTAHEI+KKMA+SK
Sbjct: 301 NQPTLGIFNTAHEIKKKMAESK 322

[Close]

BLAST of Spg006865 vs. NCBI nr
Match: KAG6601808.1 (Zinc finger CCCH domain-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 610.9 bits (1574), Expect = 6.3e-171
Identity = 302/321 (94.08%), Postives = 313/321 (97.51%), Query Frame = 0


Query: 1   MTDTGENQQPEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKTETSFLANQKKAPKTESKLY 60
           MTDTGENQQPEQVCSFF+KPTKNKNIRKRTVDEDEE+   +ETS L NQKKAPKT+SKLY
Sbjct: 1   MTDTGENQQPEQVCSFFKKPTKNKNIRKRTVDEDEEDSKSSETSVLQNQKKAPKTDSKLY 60

Query: 61  FSSGPSKSSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAIRERV 120
           FSSGPSKS+L+NESN E +KPIFQFESSKEIQVHHDSRATATLETET+FSRDARAIRERV
Sbjct: 61  FSSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180
           LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMGS 240
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAM S
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240

Query: 241 DDGDEDAAEQSDEDDEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300
           DDGDEDAAEQSDED+EDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC
Sbjct: 241 DDGDEDAAEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300

Query: 301 NQPTLGIFNTAHEIRKKMAQS 322
           NQPTLGIFNTAHEI+KKMA+S
Sbjct: 301 NQPTLGIFNTAHEIKKKMAES 321

[Close]

BLAST of Spg006865 vs. ExPASy Swiss-Prot
Match: Q8GX84 (Zinc finger CCCH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=At1g01350 PE=2 SV=2)

HSP 1 Score: 478.0 bits (1229), Expect = 8.3e-134
Identity = 235/318 (73.90%), Postives = 276/318 (86.79%), Query Frame = 0


Query: 6   ENQQPEQVCSFFRKPTKNKNIRKRTVDEDEEE-DSKTETSFLANQKKAPKTESKLYFSSG 65
           +  Q +QVC+FF+KPTK+KNIRKRT+D DEE+ DSK+E+S L N KK  K +SKLYFSSG
Sbjct: 22  QETQSQQVCTFFKKPTKSKNIRKRTIDADEEDGDSKSESSILQNLKKVAKPDSKLYFSSG 81

Query: 66  PSKSSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAIRERVLKQA 125
           PSKSS +  ++  PE+ +F ++SSKEIQV +DS ATATLETET+F++DARAIRERVLK+A
Sbjct: 82  PSKSSTT--TSGAPERSVFHYDSSKEIQVQNDSGATATLETETDFNQDARAIRERVLKKA 141

Query: 126 EEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRASARF 185
           +EALKG  K +  EKLYKG++ Y D+KAGFRRE TISSEKAGG+HGPLRASAHIR SARF
Sbjct: 142 DEALKGNKKKASDEKLYKGIHGYTDHKAGFRREQTISSEKAGGSHGPLRASAHIRVSARF 201

Query: 186 DYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMGSDDGD 245
           DYQPDICKDYKETGYCGYGD+CKF+HDRGDYK GWQ+EKEWEE EK RKR  AMG +D D
Sbjct: 202 DYQPDICKDYKETGYCGYGDSCKFLHDRGDYKPGWQIEKEWEEAEKVRKRNKAMGVEDED 261

Query: 246 EDAAEQSDEDDEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVCNQPT 305
           ++A + SDE DE+ALPFACFICREPFVDPVVTKCKHYFCEHCALKHH KNKKCFVCNQPT
Sbjct: 262 DEADKDSDE-DENALPFACFICREPFVDPVVTKCKHYFCEHCALKHHTKNKKCFVCNQPT 321

Query: 306 LGIFNTAHEIRKKMAQSK 323
           +GIFN AHEI+K+MA+ +
Sbjct: 322 MGIFNAAHEIKKRMAEER 336

[Close]

BLAST of Spg006865 vs. ExPASy Swiss-Prot
Match: Q9FNG6 (Zinc finger CCCH domain-containing protein 51 OS=Arabidopsis thaliana OX=3702 GN=At5g06420 PE=2 SV=1)

HSP 1 Score: 475.7 bits (1223), Expect = 4.1e-133
Identity = 232/321 (72.27%), Postives = 273/321 (85.05%), Query Frame = 0


Query: 3   DTGENQQPEQVCSFFRKPTKNKNIRKRTVDEDEEE-DSKTETSFLANQKKAPKTESKLYF 62
           D   NQ+ +QVC+FF+KPTK+KNIRKRT+D DEE+ DSK+E+S L N KK  K +S LYF
Sbjct: 57  DNSNNQESQQVCTFFKKPTKSKNIRKRTIDADEEDGDSKSESSILQNLKKVAKPDSNLYF 116

Query: 63  SSGPSKSSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAIRERVL 122
           SSGP     S  ++  PE+P+F ++SSKEIQV +DS ATATLETET+F++DARAIRERVL
Sbjct: 117 SSGP-----STRTSGAPERPVFHYDSSKEIQVQNDSGATATLETETDFNQDARAIRERVL 176

Query: 123 KQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRAS 182
           K+A+ ALKG  K +  EKLYKG++ Y D+KAGFRRE TISSEKAGG+HGPLRASAHIR S
Sbjct: 177 KKADHALKGNKKKASDEKLYKGIHGYTDHKAGFRREQTISSEKAGGSHGPLRASAHIRVS 236

Query: 183 ARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMGSD 242
           ARFDYQPDICKDYKETGYCGYGD+CKF+HDRGDYK GWQ+EKEWEE EK RKR  AMG +
Sbjct: 237 ARFDYQPDICKDYKETGYCGYGDSCKFLHDRGDYKPGWQIEKEWEEAEKVRKRNKAMGVE 296

Query: 243 DGDEDAAEQSDEDDEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVCN 302
           D D++A + SDE DE+ALPFACFICREPF+DPVVTKCKHYFCEHCALKHH KNKKCFVCN
Sbjct: 297 DDDDEADKDSDE-DENALPFACFICREPFLDPVVTKCKHYFCEHCALKHHTKNKKCFVCN 356

Query: 303 QPTLGIFNTAHEIRKKMAQSK 323
           QPT+GIFN AHEI+K+MA+ +
Sbjct: 357 QPTMGIFNAAHEIKKRMAEER 371

[Close]

BLAST of Spg006865 vs. ExPASy Swiss-Prot
Match: Q6K4V3 (Zinc finger CCCH domain-containing protein 15 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0301000 PE=2 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 5.2e-120
Identity = 224/321 (69.78%), Postives = 254/321 (79.13%), Query Frame = 0


Query: 13  VCSFFRKPTKNKNIRKRTV-----DEDEEEDSKTETSFLANQKKAPKTESKLYFSSGPSK 72
           VCSF RKP   KNIRKR       D+D+E+ S    +  A  KKAP + SKL+FSS    
Sbjct: 18  VCSFVRKPP--KNIRKRPTAPAGSDDDDEDGSGAIAA--ARAKKAPSSTSKLFFSSA--- 77

Query: 73  SSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAIRERVLKQAEEA 132
                + ++EP +  FQ+ESS+ IQ   DSRATATLETETEF RDARAIRER LKQAEE+
Sbjct: 78  -----DGSSEPRR--FQYESSRTIQASTDSRATATLETETEFDRDARAIRERQLKQAEES 137

Query: 133 LK------GKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRAS 192
           LK           SG  ++YKG++ Y DYKAGFRREHT+SSEKAGG+HGPLRASAHIR S
Sbjct: 138 LKKNPSAPASSSGSGSGEVYKGIHGYTDYKAGFRREHTVSSEKAGGSHGPLRASAHIRLS 197

Query: 193 ARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMGSD 252
           ARFDYQPDICKDYKETGYCGYGD+CKFMHDRGDYKSGWQ+EKEWEE EKARKR++AMG D
Sbjct: 198 ARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQIEKEWEEAEKARKRRIAMGGD 257

Query: 253 DGDEDAAEQSDEDDEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVCN 312
             D +A E+ D+DDE+ALPFAC+ICREPFVDPVVTKCKHYFCEHCALKHH+KNKKCFVCN
Sbjct: 258 GSDYEAGEEDDDDDEEALPFACYICREPFVDPVVTKCKHYFCEHCALKHHSKNKKCFVCN 317

Query: 313 QPTLGIFNTAHEIRKKMAQSK 323
           +PTLGIFN A EIRKKMAQ K
Sbjct: 318 KPTLGIFNAAQEIRKKMAQDK 324

[Close]

BLAST of Spg006865 vs. ExPASy Swiss-Prot
Match: Q67ER4 (E3 ubiquitin-protein ligase RNF113A OS=Bos taurus OX=9913 GN=RNF113A PE=2 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 6.3e-49
Identity = 127/330 (38.48%), Postives = 185/330 (56.06%), Query Frame = 0


Query: 11  EQVCSF-FRKPTKN--KNIRKRTVDEDEEEDSKT-----ETSFLANQKKA--------PK 70
           +QVC+F F+KP +      RKR +   E  DS +      T     +K+A         +
Sbjct: 12  DQVCTFLFKKPGRKVAAGRRKRPICNQESGDSSSSSDEGNTVVRPEKKRAVHNPMIQKTR 71

Query: 71  TESKLYFSSGPSKSSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDAR 130
              K   + G   S    E+ +E    +++   S +     D  ATA  E +TE  RDA+
Sbjct: 72  GSGKQKVAYGDLSSEEEEENKSESLGVVYKSTRSAKPVGPEDMGATAVYELDTEKERDAQ 131

Query: 131 AIRERVLKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGG--AHGPL 190
           AI ER  K  EE L+G+      +K+Y+G+N   +Y+   + + T     + G    GP+
Sbjct: 132 AIFERSQKIQEE-LRGQ----EDDKIYRGIN---NYQKFMKPKDTSMGNASSGMVRKGPI 191

Query: 191 RASAHIRASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKAR 250
           RA  H+RA+ R+DYQPDICKDYKETG+CG+GD+CKF+HDR DYK GWQ+E+E +E     
Sbjct: 192 RAPEHLRATVRWDYQPDICKDYKETGFCGFGDSCKFLHDRSDYKHGWQIERELDE----- 251

Query: 251 KRKLAMGSDDGDEDAAEQSDEDDEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHA 310
             +  +  D+  E  +      DE+ +PF CFICR+ F +PVVTKC+HYFCE CAL+H  
Sbjct: 252 -GRYGVYEDENYEVGS------DEEEIPFKCFICRQTFQNPVVTKCRHYFCESCALQHFR 311

Query: 311 KNKKCFVCNQPTLGIFNTAHEIRKKMAQSK 323
              +C+VC+Q T G+FN A E+  K+ + +
Sbjct: 312 TTPRCYVCDQQTNGVFNPAKELIAKLEKHR 321

[Close]

BLAST of Spg006865 vs. ExPASy Swiss-Prot
Match: O15541 (E3 ubiquitin-protein ligase RNF113A OS=Homo sapiens OX=9606 GN=RNF113A PE=1 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 6.3e-49
Identity = 133/330 (40.30%), Postives = 184/330 (55.76%), Query Frame = 0


Query: 11  EQVCSF-FRKPTKN--KNIRKRTV---DEDEEEDSKTETSFLANQKKAPKTESKLY---F 70
           +QVC+F F+KP +      RKR     +  E   S  E   +   +K   T + +     
Sbjct: 12  DQVCTFLFKKPGRKGAAGRRKRPACDPEPGESGSSSDEGCTVVRPEKKRVTHNPMIQKTR 71

Query: 71  SSGPSKS-----SLSNESNAEPEKPIFQFESSKEIQV--HHDSRATATLETETEFSRDAR 130
            SG  K+     S   E   EPE     ++S++  +     D  ATA  E +TE  RDA+
Sbjct: 72  DSGKQKAAYGDLSSEEEEENEPESLGVVYKSTRSAKPVGPEDMGATAVYELDTEKERDAQ 131

Query: 131 AIRERVLKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGG--AHGPL 190
           AI ER  K  EE L+GK      +K+Y+G+N Y  Y    + + T     + G    GP+
Sbjct: 132 AIFERSQKIQEE-LRGK----EDDKIYRGINNYQKY---MKPKDTSMGNASSGMVRKGPI 191

Query: 191 RASAHIRASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKAR 250
           RA  H+RA+ R+DYQPDICKDYKETG+CG+GD+CKF+HDR DYK GWQ+E+E +E     
Sbjct: 192 RAPEHLRATVRWDYQPDICKDYKETGFCGFGDSCKFLHDRSDYKHGWQIERELDE----- 251

Query: 251 KRKLAMGSDDGDEDAAEQSDEDDEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHA 310
                 G     ED   +   DDE+ +PF CFICR+ F +PVVTKC+HYFCE CAL+H  
Sbjct: 252 ------GRYGVYEDENYEVGSDDEE-IPFKCFICRQSFQNPVVTKCRHYFCESCALQHFR 311

Query: 311 KNKKCFVCNQPTLGIFNTAHEIRKKMAQSK 323
              +C+VC+Q T G+FN A E+  K+ + +
Sbjct: 312 TTPRCYVCDQQTNGVFNPAKELIAKLEKHR 321

[Close]

BLAST of Spg006865 vs. ExPASy TrEMBL
Match: A0A6J1H4B5 (zinc finger CCCH domain-containing protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111459918 PE=4 SV=1)

HSP 1 Score: 615.5 bits (1586), Expect = 1.2e-172
Identity = 305/322 (94.72%), Postives = 314/322 (97.52%), Query Frame = 0


Query: 1   MTDTGENQQPEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKTETSFLANQKKAPKTESKLY 60
           MTDTGENQQPEQVCSFF+KPTKNKNIRKRTVDEDEEE   TETS L NQKKAPKT+SKLY
Sbjct: 1   MTDTGENQQPEQVCSFFKKPTKNKNIRKRTVDEDEEESKSTETSVLQNQKKAPKTDSKLY 60

Query: 61  FSSGPSKSSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAIRERV 120
           FSSGPSKS+L+NESN E +KPIFQFESSKEIQVHHDSRATATLETET+FSRDARAIRERV
Sbjct: 61  FSSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180
           LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMGS 240
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAM S
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240

Query: 241 DDGDEDAAEQSDEDDEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300
           DDGDEDAAEQSDED+EDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC
Sbjct: 241 DDGDEDAAEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300

Query: 301 NQPTLGIFNTAHEIRKKMAQSK 323
           NQPTLGIFNTAHEI+KKMA+SK
Sbjct: 301 NQPTLGIFNTAHEIKKKMAESK 322

[Close]

BLAST of Spg006865 vs. ExPASy TrEMBL
Match: A0A0A0KFS0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G382870 PE=4 SV=1)

HSP 1 Score: 615.1 bits (1585), Expect = 1.6e-172
Identity = 306/322 (95.03%), Postives = 312/322 (96.89%), Query Frame = 0


Query: 1   MTDTGENQQPEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKTETSFLANQKKAPKTESKLY 60
           MTDTG+ Q  EQVCSFFRKPTKNKNIRKRTVDEDEEEDSK ETSFL NQKKAPKTESKLY
Sbjct: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60

Query: 61  FSSGPSKSSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAIRERV 120
           FSSGPSK+S SNESN EP KPIFQFESSKEIQVHHDSRATATLETET+FSRDARAIRERV
Sbjct: 61  FSSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180
           LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMGS 240
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAM S
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240

Query: 241 DDGDEDAAEQSDEDDEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300
           DDGDED +EQSDED+EDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC
Sbjct: 241 DDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300

Query: 301 NQPTLGIFNTAHEIRKKMAQSK 323
           NQPTLGIFNTAHEIRK+MAQSK
Sbjct: 301 NQPTLGIFNTAHEIRKRMAQSK 322

[Close]

BLAST of Spg006865 vs. ExPASy TrEMBL
Match: A0A1S3CS03 (zinc finger CCCH domain-containing protein 1 OS=Cucumis melo OX=3656 GN=LOC103504086 PE=4 SV=1)

HSP 1 Score: 613.6 bits (1581), Expect = 4.7e-172
Identity = 306/322 (95.03%), Postives = 312/322 (96.89%), Query Frame = 0


Query: 1   MTDTGENQQPEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKTETSFLANQKKAPKTESKLY 60
           MTDTG+ Q  EQVCSFFRKPTKNKNIRKRTVDEDEEEDSK ETSFL NQKKAPKTESKLY
Sbjct: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60

Query: 61  FSSGPSKSSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAIRERV 120
           FSSGPSK+SLSNESN EP KPIFQFESSKEIQVHHDSRATATLETET+FSRDARAIRERV
Sbjct: 61  FSSGPSKNSLSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180
           LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMGS 240
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAM S
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240

Query: 241 DDGDEDAAEQSDEDDEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300
           DDGDED++EQSDED+E ALPFACFICREPFVDPVVTKC HYFCEHCALKHHAKNKKCFVC
Sbjct: 241 DDGDEDSSEQSDEDEEGALPFACFICREPFVDPVVTKCGHYFCEHCALKHHAKNKKCFVC 300

Query: 301 NQPTLGIFNTAHEIRKKMAQSK 323
           NQPTLGIFNTAHEIRKKMAQSK
Sbjct: 301 NQPTLGIFNTAHEIRKKMAQSK 322

[Close]

BLAST of Spg006865 vs. ExPASy TrEMBL
Match: A0A6J1BYC6 (zinc finger CCCH domain-containing protein 1 OS=Momordica charantia OX=3673 GN=LOC111006576 PE=4 SV=1)

HSP 1 Score: 610.5 bits (1573), Expect = 4.0e-171
Identity = 306/323 (94.74%), Postives = 314/323 (97.21%), Query Frame = 0


Query: 1   MTDTGENQQPEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKTETSFLANQKKAPKTESKLY 60
           MTDTGENQQPEQVCSFF+KPTKNKNIRKRT+DEDEEEDSKTETS L NQKKA KTESKLY
Sbjct: 1   MTDTGENQQPEQVCSFFKKPTKNKNIRKRTIDEDEEEDSKTETSLLLNQKKALKTESKLY 60

Query: 61  FSSGPSKSSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAIRERV 120
           FSSGPSKSSLSNESN E +KPIFQFESSKEIQVHHDS+ATATLETETEFSRDARAIRERV
Sbjct: 61  FSSGPSKSSLSNESNVESDKPIFQFESSKEIQVHHDSKATATLETETEFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGGE-KLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIR 180
           LKQA+EALKGKGKSSG E KLYKGVNAYVDYKAGFRRE TISSEKAGGAHGPLRASAHIR
Sbjct: 121 LKQADEALKGKGKSSGDEKKLYKGVNAYVDYKAGFRREQTISSEKAGGAHGPLRASAHIR 180

Query: 181 ASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMG 240
           ASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMG
Sbjct: 181 ASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMG 240

Query: 241 SDDGDEDAAEQSDEDDEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFV 300
           SD+GDED AEQSDED+EDALPFACFICREPFVDPV+TKCKHYFCEHCALKHHAKNKKCFV
Sbjct: 241 SDEGDEDTAEQSDEDEEDALPFACFICREPFVDPVMTKCKHYFCEHCALKHHAKNKKCFV 300

Query: 301 CNQPTLGIFNTAHEIRKKMAQSK 323
           CNQPTLGIFNTAHEIRKKMAQSK
Sbjct: 301 CNQPTLGIFNTAHEIRKKMAQSK 323

[Close]

BLAST of Spg006865 vs. ExPASy TrEMBL
Match: A0A6J1I9H7 (zinc finger CCCH domain-containing protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111470453 PE=4 SV=1)

HSP 1 Score: 609.8 bits (1571), Expect = 6.8e-171
Identity = 302/322 (93.79%), Postives = 312/322 (96.89%), Query Frame = 0


Query: 1   MTDTGENQQPEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKTETSFLANQKKAPKTESKLY 60
           MTDTGENQQPEQVCSFF+KPTKNKNIRKRTVDEDEE+   TETS L NQKKAPKT+SKLY
Sbjct: 1   MTDTGENQQPEQVCSFFKKPTKNKNIRKRTVDEDEEDSKSTETSVLQNQKKAPKTDSKLY 60

Query: 61  FSSGPSKSSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAIRERV 120
           FSSGPSKS+L+NESN E +KPIFQFESSKEIQVHHDSRATATLETET+FSRDARAIRERV
Sbjct: 61  FSSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180
           LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMGS 240
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAM S
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMRS 240

Query: 241 DDGDEDAAEQSDEDDEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300
           DDGDED AEQSDED+EDALPFACFICREPFVDPVVTKCKHYFCEHCALK HAKNKKCFVC
Sbjct: 241 DDGDEDVAEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKRHAKNKKCFVC 300

Query: 301 NQPTLGIFNTAHEIRKKMAQSK 323
           NQPTLGIFNTAHEI+KKMA+SK
Sbjct: 301 NQPTLGIFNTAHEIKKKMAESK 322

[Close]

BLAST of Spg006865 vs. TAIR 10
Match: AT1G01350.1 (Zinc finger (CCCH-type/C3HC4-type RING finger) family protein )

HSP 1 Score: 478.0 bits (1229), Expect = 5.9e-135
Identity = 235/318 (73.90%), Postives = 276/318 (86.79%), Query Frame = 0


Query: 6   ENQQPEQVCSFFRKPTKNKNIRKRTVDEDEEE-DSKTETSFLANQKKAPKTESKLYFSSG 65
           +  Q +QVC+FF+KPTK+KNIRKRT+D DEE+ DSK+E+S L N KK  K +SKLYFSSG
Sbjct: 22  QETQSQQVCTFFKKPTKSKNIRKRTIDADEEDGDSKSESSILQNLKKVAKPDSKLYFSSG 81

Query: 66  PSKSSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAIRERVLKQA 125
           PSKSS +  ++  PE+ +F ++SSKEIQV +DS ATATLETET+F++DARAIRERVLK+A
Sbjct: 82  PSKSSTT--TSGAPERSVFHYDSSKEIQVQNDSGATATLETETDFNQDARAIRERVLKKA 141

Query: 126 EEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRASARF 185
           +EALKG  K +  EKLYKG++ Y D+KAGFRRE TISSEKAGG+HGPLRASAHIR SARF
Sbjct: 142 DEALKGNKKKASDEKLYKGIHGYTDHKAGFRREQTISSEKAGGSHGPLRASAHIRVSARF 201

Query: 186 DYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMGSDDGD 245
           DYQPDICKDYKETGYCGYGD+CKF+HDRGDYK GWQ+EKEWEE EK RKR  AMG +D D
Sbjct: 202 DYQPDICKDYKETGYCGYGDSCKFLHDRGDYKPGWQIEKEWEEAEKVRKRNKAMGVEDED 261

Query: 246 EDAAEQSDEDDEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVCNQPT 305
           ++A + SDE DE+ALPFACFICREPFVDPVVTKCKHYFCEHCALKHH KNKKCFVCNQPT
Sbjct: 262 DEADKDSDE-DENALPFACFICREPFVDPVVTKCKHYFCEHCALKHHTKNKKCFVCNQPT 321

Query: 306 LGIFNTAHEIRKKMAQSK 323
           +GIFN AHEI+K+MA+ +
Sbjct: 322 MGIFNAAHEIKKRMAEER 336

[Close]

BLAST of Spg006865 vs. TAIR 10
Match: AT5G06420.1 (Zinc finger (CCCH-type/C3HC4-type RING finger) family protein )

HSP 1 Score: 475.7 bits (1223), Expect = 2.9e-134
Identity = 232/321 (72.27%), Postives = 273/321 (85.05%), Query Frame = 0


Query: 3   DTGENQQPEQVCSFFRKPTKNKNIRKRTVDEDEEE-DSKTETSFLANQKKAPKTESKLYF 62
           D   NQ+ +QVC+FF+KPTK+KNIRKRT+D DEE+ DSK+E+S L N KK  K +S LYF
Sbjct: 57  DNSNNQESQQVCTFFKKPTKSKNIRKRTIDADEEDGDSKSESSILQNLKKVAKPDSNLYF 116

Query: 63  SSGPSKSSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAIRERVL 122
           SSGP     S  ++  PE+P+F ++SSKEIQV +DS ATATLETET+F++DARAIRERVL
Sbjct: 117 SSGP-----STRTSGAPERPVFHYDSSKEIQVQNDSGATATLETETDFNQDARAIRERVL 176

Query: 123 KQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRAS 182
           K+A+ ALKG  K +  EKLYKG++ Y D+KAGFRRE TISSEKAGG+HGPLRASAHIR S
Sbjct: 177 KKADHALKGNKKKASDEKLYKGIHGYTDHKAGFRREQTISSEKAGGSHGPLRASAHIRVS 236

Query: 183 ARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMGSD 242
           ARFDYQPDICKDYKETGYCGYGD+CKF+HDRGDYK GWQ+EKEWEE EK RKR  AMG +
Sbjct: 237 ARFDYQPDICKDYKETGYCGYGDSCKFLHDRGDYKPGWQIEKEWEEAEKVRKRNKAMGVE 296

Query: 243 DGDEDAAEQSDEDDEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVCN 302
           D D++A + SDE DE+ALPFACFICREPF+DPVVTKCKHYFCEHCALKHH KNKKCFVCN
Sbjct: 297 DDDDEADKDSDE-DENALPFACFICREPFLDPVVTKCKHYFCEHCALKHHTKNKKCFVCN 356

Query: 303 QPTLGIFNTAHEIRKKMAQSK 323
           QPT+GIFN AHEI+K+MA+ +
Sbjct: 357 QPTMGIFNAAHEIKKRMAEER 371

[Close]

BLAST of Spg006865 vs. TAIR 10
Match: AT5G06420.2 (Zinc finger (CCCH-type/C3HC4-type RING finger) family protein )

HSP 1 Score: 475.7 bits (1223), Expect = 2.9e-134
Identity = 232/321 (72.27%), Postives = 273/321 (85.05%), Query Frame = 0


Query: 3   DTGENQQPEQVCSFFRKPTKNKNIRKRTVDEDEEE-DSKTETSFLANQKKAPKTESKLYF 62
           D   NQ+ +QVC+FF+KPTK+KNIRKRT+D DEE+ DSK+E+S L N KK  K +S LYF
Sbjct: 57  DNSNNQESQQVCTFFKKPTKSKNIRKRTIDADEEDGDSKSESSILQNLKKVAKPDSNLYF 116

Query: 63  SSGPSKSSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAIRERVL 122
           SSGP     S  ++  PE+P+F ++SSKEIQV +DS ATATLETET+F++DARAIRERVL
Sbjct: 117 SSGP-----STRTSGAPERPVFHYDSSKEIQVQNDSGATATLETETDFNQDARAIRERVL 176

Query: 123 KQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRAS 182
           K+A+ ALKG  K +  EKLYKG++ Y D+KAGFRRE TISSEKAGG+HGPLRASAHIR S
Sbjct: 177 KKADHALKGNKKKASDEKLYKGIHGYTDHKAGFRREQTISSEKAGGSHGPLRASAHIRVS 236

Query: 183 ARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMGSD 242
           ARFDYQPDICKDYKETGYCGYGD+CKF+HDRGDYK GWQ+EKEWEE EK RKR  AMG +
Sbjct: 237 ARFDYQPDICKDYKETGYCGYGDSCKFLHDRGDYKPGWQIEKEWEEAEKVRKRNKAMGVE 296

Query: 243 DGDEDAAEQSDEDDEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVCN 302
           D D++A + SDE DE+ALPFACFICREPF+DPVVTKCKHYFCEHCALKHH KNKKCFVCN
Sbjct: 297 DDDDEADKDSDE-DENALPFACFICREPFLDPVVTKCKHYFCEHCALKHHTKNKKCFVCN 356

Query: 303 QPTLGIFNTAHEIRKKMAQSK 323
           QPT+GIFN AHEI+K+MA+ +
Sbjct: 357 QPTMGIFNAAHEIKKRMAEER 371

[Close]

BLAST of Spg006865 vs. TAIR 10
Match: AT4G01023.1 (RING/U-box superfamily protein )

HSP 1 Score: 108.6 bits (270), Expect = 9.4e-24
Identity = 52/114 (45.61%), Postives = 74/114 (64.91%), Query Frame = 0


Query: 209 MHDRGDYKSGWQLEKEWEEVEKARKRKLAMGSDDGDEDAAEQSDEDDEDALPFACFICRE 268
           + D        +LEK  ++++K   RKL        E     + E+D+DALP AC IC+ 
Sbjct: 40  VEDEDSNNESSRLEKLEKKIKKETARKL--------ETDFVLTGEEDDDALPLACSICQN 99

Query: 269 PFVDPVVTKCKHYFCEHCALKHHAKNKKCFVCNQPTLGIFNTAHEIRKKMAQSK 323
           PF+DPVVT C HYFC+ CALKHH +N  CFVCN+PTLG+F+TA EI++++ + +
Sbjct: 100 PFLDPVVTNCNHYFCDKCALKHHTENDTCFVCNEPTLGLFDTAVEIKERIEEER 145

The following BLAST results are available for this feature:

BLAST of Spg006865 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022958735.1	2.5e-172	94.72	zinc finger CCCH domain-containing protein 1 [Cucurbita moschata]	[more]
XP_004149426.1	3.3e-172	95.03	zinc finger CCCH domain-containing protein 1 [Cucumis sativus] >KGN47699.1 hypot...	[more]
XP_008466746.1	9.7e-172	95.03	PREDICTED: zinc finger CCCH domain-containing protein 1 [Cucumis melo] >XP_00846...	[more]
XP_023548600.1	1.6e-171	94.10	zinc finger CCCH domain-containing protein 1 [Cucurbita pepo subsp. pepo] >XP_02...	[more]
KAG6601808.1	6.3e-171	94.08	Zinc finger CCCH domain-containing protein 1, partial [Cucurbita argyrosperma su...	[more]

BLAST of Spg006865 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GX84	8.3e-134	73.90	Zinc finger CCCH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9FNG6	4.1e-133	72.27	Zinc finger CCCH domain-containing protein 51 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q6K4V3	5.2e-120	69.78	Zinc finger CCCH domain-containing protein 15 OS=Oryza sativa subsp. japonica OX...	[more]
Q67ER4	6.3e-49	38.48	E3 ubiquitin-protein ligase RNF113A OS=Bos taurus OX=9913 GN=RNF113A PE=2 SV=1	[more]
O15541	6.3e-49	40.30	E3 ubiquitin-protein ligase RNF113A OS=Homo sapiens OX=9606 GN=RNF113A PE=1 SV=1	[more]

BLAST of Spg006865 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H4B5	1.2e-172	94.72	zinc finger CCCH domain-containing protein 1 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A0A0KFS0	1.6e-172	95.03	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G382870 PE=4 SV=1	[more]
A0A1S3CS03	4.7e-172	95.03	zinc finger CCCH domain-containing protein 1 OS=Cucumis melo OX=3656 GN=LOC10350...	[more]
A0A6J1BYC6	4.0e-171	94.74	zinc finger CCCH domain-containing protein 1 OS=Momordica charantia OX=3673 GN=L...	[more]
A0A6J1I9H7	6.8e-171	93.79	zinc finger CCCH domain-containing protein 1 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]

BLAST of Spg006865 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G01350.1	5.9e-135	73.90	Zinc finger (CCCH-type/C3HC4-type RING finger) family protein	[more]
AT5G06420.1	2.9e-134	72.27	Zinc finger (CCCH-type/C3HC4-type RING finger) family protein	[more]
AT5G06420.2	2.9e-134	72.27	Zinc finger (CCCH-type/C3HC4-type RING finger) family protein	[more]
AT4G01023.1	9.4e-24	45.61	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 263..300 e-value: 8.2E-5 score: 32.0
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 263..301 score: 10.571388
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 185..212 e-value: 1.8E-7 score: 40.8
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 186..211 e-value: 6.3E-10 score: 38.7
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 185..213 score: 14.577143
None	No IPR available	GENE3D	4.10.1000.10		coord: 183..217 e-value: 1.8E-6 score: 29.2
None	No IPR available	PFAM	PF13920	zf-C3HC4_3	coord: 262..304 e-value: 5.4E-9 score: 35.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..19
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..78
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 234..253
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..106
None	No IPR available	PANTHER	PTHR12930:SF9	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 1-LIKE	coord: 1..322
None	No IPR available	CDD	cd16539	RING-HC_RNF113A_B	coord: 261..301 e-value: 7.55559E-25 score: 92.6787
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 262..306
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 261..320 e-value: 8.5E-16 score: 59.3
IPR039971	Pre-mRNA-splicing factor CWC24-like	PANTHER	PTHR12930	ZINC FINGER PROTEIN 183	coord: 1..322
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 278..287
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 184..216

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg006865.1	Spg006865.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034247	snoRNA splicing
cellular_component	GO:0000932	P-body
cellular_component	GO:0005684	U2-type spliceosomal complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding