Spg006859 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGAAAAGAAAAGGAAGACGAACGACAACTTCTCTCCTTCTTTCACACCAAACCCAGATTCTGCTTCTACTACTTCTTGTATAAACATTCTCTTTATCTTCTCAAGTTAATTCGTATATTAATTACATTATTATTTGGCAGAGTAATATTTTGGTATGGTTTATTTATTTCTGCAGTTTTAAGGTCCAGCAGGGACCAAAAACCCCTCCATTATACTTTTCAAATCCAATCCTTTTCGTTGCTGAAGGCCGCACTTGCTAGTTCCAATCCACAGCGTGACAGATATGAATCCCAGACCTTCAATGCTGGCGGTTATAAATGGTACTATTATTATAACTTATTACCTCCATTTGCTACTTCTCATTTCTCACTATTTTTGTTTGCTTTGGCAGGAAATTAGCTCTCTATCCCAACGGAGATGAGAAAAGAAATGGGTCTGATCATATCTCCCTCTATTTGGTAATGGCTGAGGATGACGTTCTATGGACTACTACTTCTGAGGTTAATGTTGTGTTTACATTTCTTGTTTACAATCATATCAGAGACAAATATTTGACAGTCCAAGGTAATCAAGCCAATTTACTTAAAAGTTTCAAAACATGTTTTAATATGTTCGCTTTCTTTGACGCTTAGTTTGATATTCATAAATTTTTCAGATGGGAAAGTAAGACGTTTTCATGCCATCAAGAAAGAGTGGGGTTTTGAAAAGTTGGTGTTACTTGACACTTTCAATGATGCTTCAAGTGGGTTGTTGGTTGATGATTGTTGTGCATTTGGAGTTGACGTTATTGTTATGAAATGTGAAGGGAATGGGGAGGCTCTTTCCTTGATCAAGCAACCAAAAGATTACAAATTTACCTGGAAATTCACCAACTTTTCAAAACAAAATTTGAATTATTATCATTCCGATCCTTTTACAGTGGAAAACTACCGTTGGTATGTAATTTTTTTTTAATTATAGATGCAATTATTTTGGAGACGAGAATTTGTTGTATGGTATCATATATATATATATATATTTACATATCCATCTTTCAGGAAAATAAGCCTACATCCTAGAGGAGACTCCCAATCGAAGACTGGCTTTTTGTCCTTGTACTTGATGCTTGATAGTTGCAAGGAGCTTCCCCAAGGTTTTCAAGTTTATGTTGAATGTGAGATGGCTGTATTGAGCCAACAATTAAGCGTTTGGCACAGAAAATTTACATGTAATTAACTACTTTTTACCTTAATTTGCAAATTAAAGGTCTTCCTTATATCGTTTTTTGTTTGATAGGACTTGTAAAATGGTGAAAATGCTTTTAGCTAATTAAAACGTTTTAAAGATTTTTATTGTGTTTGATACATAGTAAAAAATGATACTGAAAATAACACTTCTTTTTAGAGGGATAGCGCTTAATCAAGGCTAATTCTCTTCTTGGGGAAAAAAATGGTGTTACTTTAGGACATTATTCGATCTTAAGAGTTTTTTTTTTTCTTTTTTAATGTGCAGTGAAACATTGGTTTGATGATAAAGAAAGCAGCTGGGGTTGGAGGAATTTCATGTCATTGAGTGATCTCAAGGAATCAACGAAGGGCTTTCTTCGTGATGATACTCTGACCATTGAAGCGAAAATTAATGTTATTTCTGCCATGAAAAAATTTTTATAAAAAGGGAAATGCTGCTGCCTACTAGCTAGATGGCAATGCTGTCTTGGATGCAACCTGAAATTTTTGTATAACTATATAAACTGAAGTTTTAGGTGGATGCCATTTGAAGACTATAAGCTGTATATATATATACAGCCTCCAGGTTTGCCTAGTTTTTCTTGTTGTGGTTCTAAACATATATATATGTGTTAGCTACGGTACTCAGAAGATGGTTGCAGCCTTATATGATTTATAAATAATTAATTTCTTCAGCATTGAGTACTTTCACAGGTGATGATTGGTGTGAGTTTTCATTTGGCCGTTTTCATTAATGAACCTTTAGTAATTATGTTCAATTTAAATCTATATTATTTTTCCTCAATTTTGGTATAGTTTTAATTTCTTTTGGTATAGTCATCACAATTTAAATATATTCTTTCACTACAAATGTGATGATTTTGCATTAAGGAATAATAATAATGATGATGATTATGATTGAGACATTAATGGAAAAATGGTAAAAGGTCTTATTATGCTAGAAAAGAGTCAACGACCCTAGACCCAACATAACATAGGATTGTTTCAAGTTAAGCATGTTTAACTTTAAAGTTCTTCTGATTGAAGGGAAAATACACTTTGTGGTATAGGTATATCTTTAAGATTCTCCTCATAATTCGGATATAG ATGGAAGAAAAGAAAAGGAAGACGAACGACAACTTCTCTCCTTCTTTCACACCAAACCCAGATTCTGCTTCTACTACTTCTTTTTTAAGGTCCAGCAGGGACCAAAAACCCCTCCATTATACTTTTCAAATCCAATCCTTTTCGTTGCTGAAGGCCGCACTTGCTAGTTCCAATCCACAGCGTGACAGATATGAATCCCAGACCTTCAATGCTGGCGGTTATAAATGGAAATTAGCTCTCTATCCCAACGGAGATGAGAAAAGAAATGGGTCTGATCATATCTCCCTCTATTTGGTAATGGCTGAGGATGACGTTCTATGGACTACTACTTCTGAGGTTAATGTTGTGTTTACATTTCTTGTTTACAATCATATCAGAGACAAATATTTGACAGTCCAAGATGGGAAAGTAAGACGTTTTCATGCCATCAAGAAAGAGTGGGGTTTTGAAAAGTTGGTGTTACTTGACACTTTCAATGATGCTTCAAGTGGGTTGTTGGTTGATGATTGTTGTGCATTTGGAGTTGACGTTATTGTTATGAAATGTGAAGGGAATGGGGAGGCTCTTTCCTTGATCAAGCAACCAAAAGATTACAAATTTACCTGGAAATTCACCAACTTTTCAAAACAAAATTTGAATTATTATCATTCCGATCCTTTTACAGTGGAAAACTACCGTTGGTATATCTTTAAGATTCTCCTCATAATTCGGATATAG ATGGAAGAAAAGAAAAGGAAGACGAACGACAACTTCTCTCCTTCTTTCACACCAAACCCAGATTCTGCTTCTACTACTTCTTTTTTAAGGTCCAGCAGGGACCAAAAACCCCTCCATTATACTTTTCAAATCCAATCCTTTTCGTTGCTGAAGGCCGCACTTGCTAGTTCCAATCCACAGCGTGACAGATATGAATCCCAGACCTTCAATGCTGGCGGTTATAAATGGAAATTAGCTCTCTATCCCAACGGAGATGAGAAAAGAAATGGGTCTGATCATATCTCCCTCTATTTGGTAATGGCTGAGGATGACGTTCTATGGACTACTACTTCTGAGGTTAATGTTGTGTTTACATTTCTTGTTTACAATCATATCAGAGACAAATATTTGACAGTCCAAGATGGGAAAGTAAGACGTTTTCATGCCATCAAGAAAGAGTGGGGTTTTGAAAAGTTGGTGTTACTTGACACTTTCAATGATGCTTCAAGTGGGTTGTTGGTTGATGATTGTTGTGCATTTGGAGTTGACGTTATTGTTATGAAATGTGAAGGGAATGGGGAGGCTCTTTCCTTGATCAAGCAACCAAAAGATTACAAATTTACCTGGAAATTCACCAACTTTTCAAAACAAAATTTGAATTATTATCATTCCGATCCTTTTACAGTGGAAAACTACCGTTGGTATATCTTTAAGATTCTCCTCATAATTCGGATATAG MEEKKRKTNDNFSPSFTPNPDSASTTSFLRSSRDQKPLHYTFQIQSFSLLKAALASSNPQRDRYESQTFNAGGYKWKLALYPNGDEKRNGSDHISLYLVMAEDDVLWTTTSEVNVVFTFLVYNHIRDKYLTVQDGKVRRFHAIKKEWGFEKLVLLDTFNDASSGLLVDDCCAFGVDVIVMKCEGNGEALSLIKQPKDYKFTWKFTNFSKQNLNYYHSDPFTVENYRWYIFKILLIIRI Homology
BLAST of Spg006859 vs. NCBI nr
Match: XP_022146381.1 (ubiquitin carboxyl-terminal hydrolase 13-like [Momordica charantia]) HSP 1 Score: 293.1 bits (749), Expect = 2.1e-75 Identity = 143/212 (67.45%), Postives = 170/212 (80.19%), Query Frame = 0
BLAST of Spg006859 vs. NCBI nr
Match: XP_038875772.1 (uncharacterized protein LOC120068142 [Benincasa hispida]) HSP 1 Score: 287.3 bits (734), Expect = 1.2e-73 Identity = 148/235 (62.98%), Postives = 184/235 (78.30%), Query Frame = 0
BLAST of Spg006859 vs. NCBI nr
Match: XP_038874970.1 (uncharacterized protein LOC120067490 [Benincasa hispida]) HSP 1 Score: 284.3 bits (726), Expect = 9.9e-73 Identity = 147/227 (64.76%), Postives = 179/227 (78.85%), Query Frame = 0
BLAST of Spg006859 vs. NCBI nr
Match: XP_022146382.1 (uncharacterized protein LOC111015610 [Momordica charantia]) HSP 1 Score: 270.8 bits (691), Expect = 1.1e-68 Identity = 137/210 (65.24%), Postives = 164/210 (78.10%), Query Frame = 0
BLAST of Spg006859 vs. NCBI nr
Match: KAA0050214.1 (MATH domain and coiled-coil domain-containing protein [Cucumis melo var. makuwa] >TYJ98194.1 MATH domain and coiled-coil domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 269.2 bits (687), Expect = 3.3e-68 Identity = 139/202 (68.81%), Postives = 162/202 (80.20%), Query Frame = 0
BLAST of Spg006859 vs. ExPASy Swiss-Prot
Match: Q9FPT1 (Ubiquitin C-terminal hydrolase 12 OS=Arabidopsis thaliana OX=3702 GN=UBP12 PE=1 SV=2) HSP 1 Score: 72.0 bits (175), Expect = 1.0e-11 Identity = 49/171 (28.65%), Postives = 82/171 (47.95%), Query Frame = 0
BLAST of Spg006859 vs. ExPASy Swiss-Prot
Match: A1L4W5 (BTB/POZ and MATH domain-containing protein 6 OS=Arabidopsis thaliana OX=3702 GN=BPM6 PE=1 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 1.1e-05 Identity = 49/190 (25.79%), Postives = 82/190 (43.16%), Query Frame = 0
BLAST of Spg006859 vs. ExPASy Swiss-Prot
Match: O22286 (BTB/POZ and MATH domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=BPM3 PE=1 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 4.1e-05 Identity = 45/197 (22.84%), Postives = 75/197 (38.07%), Query Frame = 0
BLAST of Spg006859 vs. ExPASy Swiss-Prot
Match: Q1EBV6 (BTB/POZ and MATH domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=BPM5 PE=1 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 6.0e-04 Identity = 39/175 (22.29%), Postives = 68/175 (38.86%), Query Frame = 0
BLAST of Spg006859 vs. ExPASy TrEMBL
Match: A0A6J1CZ69 (ubiquitin carboxyl-terminal hydrolase 13-like OS=Momordica charantia OX=3673 GN=LOC111015609 PE=4 SV=1) HSP 1 Score: 293.1 bits (749), Expect = 1.0e-75 Identity = 143/212 (67.45%), Postives = 170/212 (80.19%), Query Frame = 0
BLAST of Spg006859 vs. ExPASy TrEMBL
Match: A0A6J1CZF7 (uncharacterized protein LOC111015610 OS=Momordica charantia OX=3673 GN=LOC111015610 PE=4 SV=1) HSP 1 Score: 270.8 bits (691), Expect = 5.5e-69 Identity = 137/210 (65.24%), Postives = 164/210 (78.10%), Query Frame = 0
BLAST of Spg006859 vs. ExPASy TrEMBL
Match: A0A5D3BGH9 (MATH domain and coiled-coil domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00850 PE=4 SV=1) HSP 1 Score: 269.2 bits (687), Expect = 1.6e-68 Identity = 139/202 (68.81%), Postives = 162/202 (80.20%), Query Frame = 0
BLAST of Spg006859 vs. ExPASy TrEMBL
Match: A0A0A0KND8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G432550 PE=4 SV=1) HSP 1 Score: 263.8 bits (673), Expect = 6.7e-67 Identity = 138/227 (60.79%), Postives = 168/227 (74.01%), Query Frame = 0
BLAST of Spg006859 vs. ExPASy TrEMBL
Match: A0A6J1CX47 (probable inactive serine/threonine-protein kinase fnkC OS=Momordica charantia OX=3673 GN=LOC111015608 PE=4 SV=1) HSP 1 Score: 263.5 bits (672), Expect = 8.8e-67 Identity = 127/202 (62.87%), Postives = 150/202 (74.26%), Query Frame = 0
BLAST of Spg006859 vs. TAIR 10
Match: AT3G17380.1 (TRAF-like family protein ) HSP 1 Score: 170.6 bits (431), Expect = 1.5e-42 Identity = 92/211 (43.60%), Postives = 127/211 (60.19%), Query Frame = 0
BLAST of Spg006859 vs. TAIR 10
Match: AT2G04170.1 (TRAF-like family protein ) HSP 1 Score: 146.0 bits (367), Expect = 3.9e-35 Identity = 79/198 (39.90%), Postives = 112/198 (56.57%), Query Frame = 0
BLAST of Spg006859 vs. TAIR 10
Match: AT2G04170.2 (TRAF-like family protein ) HSP 1 Score: 146.0 bits (367), Expect = 3.9e-35 Identity = 79/198 (39.90%), Postives = 112/198 (56.57%), Query Frame = 0
BLAST of Spg006859 vs. TAIR 10
Match: AT2G04170.3 (TRAF-like family protein ) HSP 1 Score: 146.0 bits (367), Expect = 3.9e-35 Identity = 79/198 (39.90%), Postives = 112/198 (56.57%), Query Frame = 0
BLAST of Spg006859 vs. TAIR 10
Match: AT2G04170.4 (TRAF-like family protein ) HSP 1 Score: 146.0 bits (367), Expect = 3.9e-35 Identity = 79/198 (39.90%), Postives = 112/198 (56.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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