Spg006859 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg006859
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTRAF-like family protein
Locationscaffold10: 39520295 .. 39522611 (+)
RNA-Seq ExpressionSpg006859
SyntenySpg006859
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGAAAAGAAAAGGAAGACGAACGACAACTTCTCTCCTTCTTTCACACCAAACCCAGATTCTGCTTCTACTACTTCTTGTATAAACATTCTCTTTATCTTCTCAAGTTAATTCGTATATTAATTACATTATTATTTGGCAGAGTAATATTTTGGTATGGTTTATTTATTTCTGCAGTTTTAAGGTCCAGCAGGGACCAAAAACCCCTCCATTATACTTTTCAAATCCAATCCTTTTCGTTGCTGAAGGCCGCACTTGCTAGTTCCAATCCACAGCGTGACAGATATGAATCCCAGACCTTCAATGCTGGCGGTTATAAATGGTACTATTATTATAACTTATTACCTCCATTTGCTACTTCTCATTTCTCACTATTTTTGTTTGCTTTGGCAGGAAATTAGCTCTCTATCCCAACGGAGATGAGAAAAGAAATGGGTCTGATCATATCTCCCTCTATTTGGTAATGGCTGAGGATGACGTTCTATGGACTACTACTTCTGAGGTTAATGTTGTGTTTACATTTCTTGTTTACAATCATATCAGAGACAAATATTTGACAGTCCAAGGTAATCAAGCCAATTTACTTAAAAGTTTCAAAACATGTTTTAATATGTTCGCTTTCTTTGACGCTTAGTTTGATATTCATAAATTTTTCAGATGGGAAAGTAAGACGTTTTCATGCCATCAAGAAAGAGTGGGGTTTTGAAAAGTTGGTGTTACTTGACACTTTCAATGATGCTTCAAGTGGGTTGTTGGTTGATGATTGTTGTGCATTTGGAGTTGACGTTATTGTTATGAAATGTGAAGGGAATGGGGAGGCTCTTTCCTTGATCAAGCAACCAAAAGATTACAAATTTACCTGGAAATTCACCAACTTTTCAAAACAAAATTTGAATTATTATCATTCCGATCCTTTTACAGTGGAAAACTACCGTTGGTATGTAATTTTTTTTTAATTATAGATGCAATTATTTTGGAGACGAGAATTTGTTGTATGGTATCATATATATATATATATATTTACATATCCATCTTTCAGGAAAATAAGCCTACATCCTAGAGGAGACTCCCAATCGAAGACTGGCTTTTTGTCCTTGTACTTGATGCTTGATAGTTGCAAGGAGCTTCCCCAAGGTTTTCAAGTTTATGTTGAATGTGAGATGGCTGTATTGAGCCAACAATTAAGCGTTTGGCACAGAAAATTTACATGTAATTAACTACTTTTTACCTTAATTTGCAAATTAAAGGTCTTCCTTATATCGTTTTTTGTTTGATAGGACTTGTAAAATGGTGAAAATGCTTTTAGCTAATTAAAACGTTTTAAAGATTTTTATTGTGTTTGATACATAGTAAAAAATGATACTGAAAATAACACTTCTTTTTAGAGGGATAGCGCTTAATCAAGGCTAATTCTCTTCTTGGGGAAAAAAATGGTGTTACTTTAGGACATTATTCGATCTTAAGAGTTTTTTTTTTTCTTTTTTAATGTGCAGTGAAACATTGGTTTGATGATAAAGAAAGCAGCTGGGGTTGGAGGAATTTCATGTCATTGAGTGATCTCAAGGAATCAACGAAGGGCTTTCTTCGTGATGATACTCTGACCATTGAAGCGAAAATTAATGTTATTTCTGCCATGAAAAAATTTTTATAAAAAGGGAAATGCTGCTGCCTACTAGCTAGATGGCAATGCTGTCTTGGATGCAACCTGAAATTTTTGTATAACTATATAAACTGAAGTTTTAGGTGGATGCCATTTGAAGACTATAAGCTGTATATATATATACAGCCTCCAGGTTTGCCTAGTTTTTCTTGTTGTGGTTCTAAACATATATATATGTGTTAGCTACGGTACTCAGAAGATGGTTGCAGCCTTATATGATTTATAAATAATTAATTTCTTCAGCATTGAGTACTTTCACAGGTGATGATTGGTGTGAGTTTTCATTTGGCCGTTTTCATTAATGAACCTTTAGTAATTATGTTCAATTTAAATCTATATTATTTTTCCTCAATTTTGGTATAGTTTTAATTTCTTTTGGTATAGTCATCACAATTTAAATATATTCTTTCACTACAAATGTGATGATTTTGCATTAAGGAATAATAATAATGATGATGATTATGATTGAGACATTAATGGAAAAATGGTAAAAGGTCTTATTATGCTAGAAAAGAGTCAACGACCCTAGACCCAACATAACATAGGATTGTTTCAAGTTAAGCATGTTTAACTTTAAAGTTCTTCTGATTGAAGGGAAAATACACTTTGTGGTATAGGTATATCTTTAAGATTCTCCTCATAATTCGGATATAG

mRNA sequence

ATGGAAGAAAAGAAAAGGAAGACGAACGACAACTTCTCTCCTTCTTTCACACCAAACCCAGATTCTGCTTCTACTACTTCTTTTTTAAGGTCCAGCAGGGACCAAAAACCCCTCCATTATACTTTTCAAATCCAATCCTTTTCGTTGCTGAAGGCCGCACTTGCTAGTTCCAATCCACAGCGTGACAGATATGAATCCCAGACCTTCAATGCTGGCGGTTATAAATGGAAATTAGCTCTCTATCCCAACGGAGATGAGAAAAGAAATGGGTCTGATCATATCTCCCTCTATTTGGTAATGGCTGAGGATGACGTTCTATGGACTACTACTTCTGAGGTTAATGTTGTGTTTACATTTCTTGTTTACAATCATATCAGAGACAAATATTTGACAGTCCAAGATGGGAAAGTAAGACGTTTTCATGCCATCAAGAAAGAGTGGGGTTTTGAAAAGTTGGTGTTACTTGACACTTTCAATGATGCTTCAAGTGGGTTGTTGGTTGATGATTGTTGTGCATTTGGAGTTGACGTTATTGTTATGAAATGTGAAGGGAATGGGGAGGCTCTTTCCTTGATCAAGCAACCAAAAGATTACAAATTTACCTGGAAATTCACCAACTTTTCAAAACAAAATTTGAATTATTATCATTCCGATCCTTTTACAGTGGAAAACTACCGTTGGTATATCTTTAAGATTCTCCTCATAATTCGGATATAG

Coding sequence (CDS)

ATGGAAGAAAAGAAAAGGAAGACGAACGACAACTTCTCTCCTTCTTTCACACCAAACCCAGATTCTGCTTCTACTACTTCTTTTTTAAGGTCCAGCAGGGACCAAAAACCCCTCCATTATACTTTTCAAATCCAATCCTTTTCGTTGCTGAAGGCCGCACTTGCTAGTTCCAATCCACAGCGTGACAGATATGAATCCCAGACCTTCAATGCTGGCGGTTATAAATGGAAATTAGCTCTCTATCCCAACGGAGATGAGAAAAGAAATGGGTCTGATCATATCTCCCTCTATTTGGTAATGGCTGAGGATGACGTTCTATGGACTACTACTTCTGAGGTTAATGTTGTGTTTACATTTCTTGTTTACAATCATATCAGAGACAAATATTTGACAGTCCAAGATGGGAAAGTAAGACGTTTTCATGCCATCAAGAAAGAGTGGGGTTTTGAAAAGTTGGTGTTACTTGACACTTTCAATGATGCTTCAAGTGGGTTGTTGGTTGATGATTGTTGTGCATTTGGAGTTGACGTTATTGTTATGAAATGTGAAGGGAATGGGGAGGCTCTTTCCTTGATCAAGCAACCAAAAGATTACAAATTTACCTGGAAATTCACCAACTTTTCAAAACAAAATTTGAATTATTATCATTCCGATCCTTTTACAGTGGAAAACTACCGTTGGTATATCTTTAAGATTCTCCTCATAATTCGGATATAG

Protein sequence

MEEKKRKTNDNFSPSFTPNPDSASTTSFLRSSRDQKPLHYTFQIQSFSLLKAALASSNPQRDRYESQTFNAGGYKWKLALYPNGDEKRNGSDHISLYLVMAEDDVLWTTTSEVNVVFTFLVYNHIRDKYLTVQDGKVRRFHAIKKEWGFEKLVLLDTFNDASSGLLVDDCCAFGVDVIVMKCEGNGEALSLIKQPKDYKFTWKFTNFSKQNLNYYHSDPFTVENYRWYIFKILLIIRI
Homology
BLAST of Spg006859 vs. NCBI nr
Match: XP_022146381.1 (ubiquitin carboxyl-terminal hydrolase 13-like [Momordica charantia])

HSP 1 Score: 293.1 bits (749), Expect = 2.1e-75
Identity = 143/212 (67.45%), Postives = 170/212 (80.19%), Query Frame = 0

Query: 17  TPNPDSASTTSFLRSSRDQKPLHYTFQIQSFSLLKAALASSNPQRDRYESQTFNAGGYKW 76
           T +P S +  S L  +RD+KPLHYT QIQSFSLLK ALA+SN   DRYESQ FNAGGYKW
Sbjct: 6   TISPSSEAADSVLSFTRDEKPLHYTLQIQSFSLLKTALAASN--CDRYESQIFNAGGYKW 65

Query: 77  KLALYPNGDEKRNGSDHISLYLVMAEDDVLWTTTSEVNVVFTFLVYNHIRDKYLTVQDGK 136
           KLA+YPNGD KRNGSDHISLYLV AED +    TSEVNVVFTFLVY+++ DKYL VQD K
Sbjct: 66  KLAVYPNGDVKRNGSDHISLYLVKAEDGI---PTSEVNVVFTFLVYDNLNDKYLAVQDEK 125

Query: 137 VRRFHAIKKEWGFEKLVLLDTFNDASSGLLVDDCCAFGVDVIVMKCEGNGEALSLIKQPK 196
           VRRFH+I+ EW FEKL+ L+TFND+S+G LV DCCAFGVD++V KC+G GE +S IK+PK
Sbjct: 126 VRRFHSIQTEWEFEKLISLETFNDSSNGFLVGDCCAFGVDIVVKKCDGKGEVVSFIKEPK 185

Query: 197 DYKFTWKFTNFSKQNLNYYHSDPFTVENYRWY 229
           + ++TWK  NFS+ + N Y SDPFTVE YR +
Sbjct: 186 NNEYTWKTNNFSQLDKNMYESDPFTVEGYRCF 212

BLAST of Spg006859 vs. NCBI nr
Match: XP_038875772.1 (uncharacterized protein LOC120068142 [Benincasa hispida])

HSP 1 Score: 287.3 bits (734), Expect = 1.2e-73
Identity = 148/235 (62.98%), Postives = 184/235 (78.30%), Query Frame = 0

Query: 1   MEEKKRKTNDNFSPSFTPNPDSASTTSFLRSSRDQKPLHYTFQIQSFSLLKAALASSNPQ 60
           M + +RK N+N   + +PNP   +++S + S+R +KP+HYT +IQSFSLLK  LASS  Q
Sbjct: 1   MGKGRRKNNNN---TVSPNPHGDNSSSVVMSTRHEKPVHYTLKIQSFSLLKNGLASS--Q 60

Query: 61  RDRYESQTFNAGGYKWKLALYPNGDEKRNGSDHISLYLVMAEDDVLWTTTSEVNVVFTFL 120
           R R+ESQ FNAG Y+WKLALYPNGDE+RN S+HISLYLV+  +++L +TTSEVNVVFTFL
Sbjct: 61  RQRFESQKFNAGCYEWKLALYPNGDERRNVSNHISLYLVIVGNNIL-STTSEVNVVFTFL 120

Query: 121 VYNHIRDKYLTVQDGKVRRFHAIKKEWGFEKLVLLDTFNDASSGLLVDDCCAFGVDVIVM 180
           VY+ +R KYLTVQDGK+RRF A+K EWG EKL+ LDTFNDAS+G LVDDCC FGVD+ VM
Sbjct: 121 VYDTLRGKYLTVQDGKMRRFSAMKTEWGIEKLLPLDTFNDASNGFLVDDCCVFGVDIFVM 180

Query: 181 KCEGN-GEALSLIKQPKDYKFTWKFTNFSKQNLNYYHSDPFTVENYRWYIFKILL 235
            C+G  GE  SLIKQPK+Y++TWK  NFS+       S+PFTVE+YRW   KILL
Sbjct: 181 SCDGGMGEVFSLIKQPKNYEYTWKLNNFSQLGSTLKESNPFTVESYRW---KILL 226

BLAST of Spg006859 vs. NCBI nr
Match: XP_038874970.1 (uncharacterized protein LOC120067490 [Benincasa hispida])

HSP 1 Score: 284.3 bits (726), Expect = 9.9e-73
Identity = 147/227 (64.76%), Postives = 179/227 (78.85%), Query Frame = 0

Query: 4   KKRKTNDNFSPSFTPNPDSASTTSFLRSSRDQKPLHYTFQIQSFSLLKAALASSNPQRDR 63
           +K K N     S   N +S+     +R+SRD+KPLHYT +IQSFSLLKAA+A+S+  R+R
Sbjct: 5   RKLKANMGNKNSIFNNENSSLV---IRTSRDEKPLHYTLKIQSFSLLKAAVAASS-IRNR 64

Query: 64  YESQTFNAGGYKWKLALYPNGDEKRNGSDHISLYLVMAEDDVLWTTTSEVNVVFTFLVYN 123
           YESQ F AGGYKWKLALYPNGD KRN ++HISLYLV AED++  ++  E+ V+  FLVY+
Sbjct: 65  YESQIFKAGGYKWKLALYPNGDFKRNVANHISLYLVSAEDEIS-SSGLEIKVMIKFLVYD 124

Query: 124 HIRDKYLTVQDGKVRRFHAIKKEWGFEKLVLLDTFNDASSGLLVDDCCAFGVDVIVMKC- 183
           +++D+Y T+QDGKVR FHAIKKEWGFEKLV LDTFND S+GLLVDDCCAFGVDVIVMK  
Sbjct: 125 NLKDRYWTIQDGKVRCFHAIKKEWGFEKLVSLDTFNDTSNGLLVDDCCAFGVDVIVMKSY 184

Query: 184 EGNGEALSLIKQPKDYKFTWKFTNFSKQNLNYYHSDPFTVENYRWYI 230
           +GN E LSLIKQ K+YK+TWK  NFS+ + N Y SDPFTV+NY W I
Sbjct: 185 DGNNEILSLIKQLKNYKYTWKINNFSQLSKNVYESDPFTVDNYTWKI 226

BLAST of Spg006859 vs. NCBI nr
Match: XP_022146382.1 (uncharacterized protein LOC111015610 [Momordica charantia])

HSP 1 Score: 270.8 bits (691), Expect = 1.1e-68
Identity = 137/210 (65.24%), Postives = 164/210 (78.10%), Query Frame = 0

Query: 4   KKRKTNDNFSPSFTPNPDSASTTSFLRSSRDQKPLHYTFQIQSFSLLKAALASSNPQRDR 63
           K+ + N   SPS       A + S LRS RD+KPLHYT QIQ FSLLK ALA+S+  RDR
Sbjct: 34  KRMQRNHIISPS-----SQADSGSVLRSIRDEKPLHYTLQIQPFSLLKTALATSS--RDR 93

Query: 64  YESQTFNAGGYKWKLALYPNGDEKRNGSDHISLYLVMAEDDVLWTTTSEVNVVFTFLVYN 123
           YES  F+  G+KWKLA+YP+GD KRNGS+HISLYLV AEDD+    T ++ VVFT LVY+
Sbjct: 94  YESPIFSVAGFKWKLAVYPSGDVKRNGSNHISLYLVTAEDDI---PTLDLTVVFTILVYD 153

Query: 124 HIRDKYLTVQDGKVRRFHAIKKEWGFEKLVLLDTFNDASSGLLVDDCCAFGVDVIVMKCE 183
           ++RD YL V DGKVRRFHA+KKEWGFEKLV L+TFND+S+G LVDDCCAFGVD+ VMKC+
Sbjct: 154 NLRDNYLAVLDGKVRRFHAMKKEWGFEKLVSLETFNDSSNGFLVDDCCAFGVDIFVMKCD 213

Query: 184 GNGEALSLIKQPKDYKFTWKFTNFSKQNLN 214
           G GEALSLIKQPK+ K+TWK  NFS+ + N
Sbjct: 214 GKGEALSLIKQPKNNKYTWKTNNFSQLDEN 233

BLAST of Spg006859 vs. NCBI nr
Match: KAA0050214.1 (MATH domain and coiled-coil domain-containing protein [Cucumis melo var. makuwa] >TYJ98194.1 MATH domain and coiled-coil domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 269.2 bits (687), Expect = 3.3e-68
Identity = 139/202 (68.81%), Postives = 162/202 (80.20%), Query Frame = 0

Query: 29  LRSSRDQKPLHYTFQIQSFSLLKAALASSNPQRDRYESQTFNAGGYKWKLALYPNGDEKR 88
           LRSSR  +PLHYT QIQSFSLLKAALA+SN   DRYESQ FN G Y WKLA+YPNGDE+R
Sbjct: 55  LRSSRVGRPLHYTLQIQSFSLLKAALAASN--CDRYESQIFNVGCYSWKLAVYPNGDEER 114

Query: 89  NGSDHISLYLVMAEDDVLWTTTSEVNVVFTFLVYNHIRDKYLTVQDGKVRRFHAIKKEWG 148
           NGS+HISLYLV AED+    TTSEVNV FTFLVY+ ++D+Y+T QDGKVRRFHA+KKEWG
Sbjct: 115 NGSNHISLYLVKAEDEN--ATTSEVNVWFTFLVYDTLKDRYMTFQDGKVRRFHAMKKEWG 174

Query: 149 FEKLVLLDTFNDASSGLLVDDCCAFGVDVIVMK-CEGNGEALSLIKQPKD-YKFTWKFTN 208
           FEKLV LDTFND S+GLLVDDCCAFGVD+IVMK  +G GE LS I+QPK+  ++++ F  
Sbjct: 175 FEKLVSLDTFNDTSNGLLVDDCCAFGVDIIVMKFYDGKGEVLSFIQQPKNCTQYSYIFIK 234

Query: 209 FSKQNLNYYHSDPFTVENYRWY 229
            S        SDPF +ENY+WY
Sbjct: 235 LSSVQT---ESDPFNMENYKWY 249

BLAST of Spg006859 vs. ExPASy Swiss-Prot
Match: Q9FPT1 (Ubiquitin C-terminal hydrolase 12 OS=Arabidopsis thaliana OX=3702 GN=UBP12 PE=1 SV=2)

HSP 1 Score: 72.0 bits (175), Expect = 1.0e-11
Identity = 49/171 (28.65%), Postives = 82/171 (47.95%), Query Frame = 0

Query: 14  PSFTPNPDSASTTSFLRSSRDQKPLHYTFQIQSFSLLKAALASSNPQRDRYESQTFNAGG 73
           P     P++A++T   + + D   L +T+ I +F         S     ++ S  F  GG
Sbjct: 31  PMEVTQPETAASTVENQPAEDPPTLKFTWTIPNF---------SRQNTRKHYSDVFVVGG 90

Query: 74  YKWKLALYPNGDEKRNGSDHISLYLVMAEDDVL---WTTTSEVNVVFTFLVYNHIRDKYL 133
           YKW++ ++P G    N  DH+S+YL +++   L   W+  ++    F+  V N I  +Y 
Sbjct: 91  YKWRILIFPKG----NNVDHLSMYLDVSDAASLPYGWSRYAQ----FSLAVVNQIHTRY- 150

Query: 134 TVQDGKVRRFHAIKKEWGFEKLVLLDTFNDASSGLLVDDCCAFGVDVIVMK 182
           TV+     +F+A + +WGF   + L    D S G LV+D      +V V K
Sbjct: 151 TVRKETQHQFNARESDWGFTSFMPLSELYDPSRGYLVNDTVLVEAEVAVRK 183

BLAST of Spg006859 vs. ExPASy Swiss-Prot
Match: A1L4W5 (BTB/POZ and MATH domain-containing protein 6 OS=Arabidopsis thaliana OX=3702 GN=BPM6 PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.1e-05
Identity = 49/190 (25.79%), Postives = 82/190 (43.16%), Query Frame = 0

Query: 1   MEEKKRKTNDNFSPSFTPNPDSASTTSFLRSSRDQKPLHYTFQIQSFSLLKAALASSNPQ 60
           M +   +T+ + SP+  P+   + T+S  RS        + F IQ +SL K      +  
Sbjct: 1   MSKLMTRTSGSSSPNTIPDQIESPTSS--RSVTQTTNGSHQFVIQGYSLAKGIGVGKH-- 60

Query: 61  RDRYESQTFNAGGYKWKLALYPNGDEKRNGSDHISLYLVMAEDDVLWTTTSEVNVVFTFL 120
                S  F+ GGY+W + +YP+G    + S ++S+++V+A +        E+++V    
Sbjct: 61  ---IASDNFSVGGYQWTIFVYPDGKNPEDNSSYVSVFIVLASECTEVRALFELSLVDQSG 120

Query: 121 VYNH-IRDKYLTVQDGKVRRFHAIKKEWGFEKLV---LLDTFNDASSGLLVDDC----CA 180
              H +   +    DG           WG+++     LL+T     S  L DDC    C 
Sbjct: 121 KGKHKVHSHFNRSLDGGPYTLKYRGSMWGYKRFFRRSLLET-----SDYLKDDCLKINCT 178

Query: 181 FGVDVIVMKC 183
            GV V  M C
Sbjct: 181 VGVVVSEMHC 178

BLAST of Spg006859 vs. ExPASy Swiss-Prot
Match: O22286 (BTB/POZ and MATH domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=BPM3 PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 4.1e-05
Identity = 45/197 (22.84%), Postives = 75/197 (38.07%), Query Frame = 0

Query: 20  PDSASTTSFLRSSRDQKPLHYTFQIQSFSLLKAALASSNPQRDRYESQTFNAGGYKWKLA 79
           PDS S TSF+ +        + F IQ +SL K        Q D      F+ GGY W + 
Sbjct: 12  PDSVS-TSFIETVNGS----HQFTIQGYSLAKGMSPGKFIQSD-----IFSVGGYDWAIY 71

Query: 80  LYPNGDEKRNGSDHISLYLVMAEDDVLWTTTSEVNVVFTFLVYNH-------IRDKYLTV 139
            YP+G    + S +ISL++ +A D      ++++  +F   + +        +   +   
Sbjct: 72  FYPDGKNPEDQSSYISLFIALASD------SNDIRALFELTLMDQSGKGKHKVHSHFDRA 131

Query: 140 QDGKVRRFHAIKKEWGFEKLVLLDTFNDASSGLLVDDCCAFGVDVIVMKCEGNGEALSLI 199
            +G           WG+++          +S  L DDC      V V++    G      
Sbjct: 132 LEGGPYTLKYKGSMWGYKRFFKRSALE--TSDYLKDDCLVINCTVGVVRARLEG------ 182

Query: 200 KQPKDYKFTWKFTNFSK 210
             PK Y      +N  +
Sbjct: 192 --PKQYGIVLPLSNMGQ 182

BLAST of Spg006859 vs. ExPASy Swiss-Prot
Match: Q1EBV6 (BTB/POZ and MATH domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=BPM5 PE=1 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 6.0e-04
Identity = 39/175 (22.29%), Postives = 68/175 (38.86%), Query Frame = 0

Query: 19  NPDSASTTSFLRSSRDQKPLHYTFQIQSFSLLKAALASSNPQRDRYESQTFNAGGYKWKL 78
           NPD   + +  +S        + F IQ +SL K      +       S  F+ GGY+W +
Sbjct: 10  NPDRVLSPTSSKSVTQTVNGSHQFVIQGYSLAKGMGIGKH-----IASDNFSVGGYQWGI 69

Query: 79  ALYPNGDEKRNGSDHISLYLVMAEDDVLWTTTSEVNVVFTFLVYNH-------IRDKYLT 138
             YP+G    + S ++S+++ +A +       +EV  +F   + +        +   +  
Sbjct: 70  FFYPDGKNPEDNSSYVSVFIALASEG------TEVRALFELALVDQSGKGKHKVHSHFER 129

Query: 139 VQDGKVRRFHAIKKEWGFEKLVLLDTFNDASSGLLVDDC----CAFGVDVIVMKC 183
             DG           WG+++          +S  L DDC    C  GV V  + C
Sbjct: 130 SLDGGPYTLKYRGSMWGYKRFFRRSILE--TSDYLKDDCLIINCTVGVVVSEILC 171

BLAST of Spg006859 vs. ExPASy TrEMBL
Match: A0A6J1CZ69 (ubiquitin carboxyl-terminal hydrolase 13-like OS=Momordica charantia OX=3673 GN=LOC111015609 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 1.0e-75
Identity = 143/212 (67.45%), Postives = 170/212 (80.19%), Query Frame = 0

Query: 17  TPNPDSASTTSFLRSSRDQKPLHYTFQIQSFSLLKAALASSNPQRDRYESQTFNAGGYKW 76
           T +P S +  S L  +RD+KPLHYT QIQSFSLLK ALA+SN   DRYESQ FNAGGYKW
Sbjct: 6   TISPSSEAADSVLSFTRDEKPLHYTLQIQSFSLLKTALAASN--CDRYESQIFNAGGYKW 65

Query: 77  KLALYPNGDEKRNGSDHISLYLVMAEDDVLWTTTSEVNVVFTFLVYNHIRDKYLTVQDGK 136
           KLA+YPNGD KRNGSDHISLYLV AED +    TSEVNVVFTFLVY+++ DKYL VQD K
Sbjct: 66  KLAVYPNGDVKRNGSDHISLYLVKAEDGI---PTSEVNVVFTFLVYDNLNDKYLAVQDEK 125

Query: 137 VRRFHAIKKEWGFEKLVLLDTFNDASSGLLVDDCCAFGVDVIVMKCEGNGEALSLIKQPK 196
           VRRFH+I+ EW FEKL+ L+TFND+S+G LV DCCAFGVD++V KC+G GE +S IK+PK
Sbjct: 126 VRRFHSIQTEWEFEKLISLETFNDSSNGFLVGDCCAFGVDIVVKKCDGKGEVVSFIKEPK 185

Query: 197 DYKFTWKFTNFSKQNLNYYHSDPFTVENYRWY 229
           + ++TWK  NFS+ + N Y SDPFTVE YR +
Sbjct: 186 NNEYTWKTNNFSQLDKNMYESDPFTVEGYRCF 212

BLAST of Spg006859 vs. ExPASy TrEMBL
Match: A0A6J1CZF7 (uncharacterized protein LOC111015610 OS=Momordica charantia OX=3673 GN=LOC111015610 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 5.5e-69
Identity = 137/210 (65.24%), Postives = 164/210 (78.10%), Query Frame = 0

Query: 4   KKRKTNDNFSPSFTPNPDSASTTSFLRSSRDQKPLHYTFQIQSFSLLKAALASSNPQRDR 63
           K+ + N   SPS       A + S LRS RD+KPLHYT QIQ FSLLK ALA+S+  RDR
Sbjct: 34  KRMQRNHIISPS-----SQADSGSVLRSIRDEKPLHYTLQIQPFSLLKTALATSS--RDR 93

Query: 64  YESQTFNAGGYKWKLALYPNGDEKRNGSDHISLYLVMAEDDVLWTTTSEVNVVFTFLVYN 123
           YES  F+  G+KWKLA+YP+GD KRNGS+HISLYLV AEDD+    T ++ VVFT LVY+
Sbjct: 94  YESPIFSVAGFKWKLAVYPSGDVKRNGSNHISLYLVTAEDDI---PTLDLTVVFTILVYD 153

Query: 124 HIRDKYLTVQDGKVRRFHAIKKEWGFEKLVLLDTFNDASSGLLVDDCCAFGVDVIVMKCE 183
           ++RD YL V DGKVRRFHA+KKEWGFEKLV L+TFND+S+G LVDDCCAFGVD+ VMKC+
Sbjct: 154 NLRDNYLAVLDGKVRRFHAMKKEWGFEKLVSLETFNDSSNGFLVDDCCAFGVDIFVMKCD 213

Query: 184 GNGEALSLIKQPKDYKFTWKFTNFSKQNLN 214
           G GEALSLIKQPK+ K+TWK  NFS+ + N
Sbjct: 214 GKGEALSLIKQPKNNKYTWKTNNFSQLDEN 233

BLAST of Spg006859 vs. ExPASy TrEMBL
Match: A0A5D3BGH9 (MATH domain and coiled-coil domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00850 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.6e-68
Identity = 139/202 (68.81%), Postives = 162/202 (80.20%), Query Frame = 0

Query: 29  LRSSRDQKPLHYTFQIQSFSLLKAALASSNPQRDRYESQTFNAGGYKWKLALYPNGDEKR 88
           LRSSR  +PLHYT QIQSFSLLKAALA+SN   DRYESQ FN G Y WKLA+YPNGDE+R
Sbjct: 55  LRSSRVGRPLHYTLQIQSFSLLKAALAASN--CDRYESQIFNVGCYSWKLAVYPNGDEER 114

Query: 89  NGSDHISLYLVMAEDDVLWTTTSEVNVVFTFLVYNHIRDKYLTVQDGKVRRFHAIKKEWG 148
           NGS+HISLYLV AED+    TTSEVNV FTFLVY+ ++D+Y+T QDGKVRRFHA+KKEWG
Sbjct: 115 NGSNHISLYLVKAEDEN--ATTSEVNVWFTFLVYDTLKDRYMTFQDGKVRRFHAMKKEWG 174

Query: 149 FEKLVLLDTFNDASSGLLVDDCCAFGVDVIVMK-CEGNGEALSLIKQPKD-YKFTWKFTN 208
           FEKLV LDTFND S+GLLVDDCCAFGVD+IVMK  +G GE LS I+QPK+  ++++ F  
Sbjct: 175 FEKLVSLDTFNDTSNGLLVDDCCAFGVDIIVMKFYDGKGEVLSFIQQPKNCTQYSYIFIK 234

Query: 209 FSKQNLNYYHSDPFTVENYRWY 229
            S        SDPF +ENY+WY
Sbjct: 235 LSSVQT---ESDPFNMENYKWY 249

BLAST of Spg006859 vs. ExPASy TrEMBL
Match: A0A0A0KND8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G432550 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 6.7e-67
Identity = 138/227 (60.79%), Postives = 168/227 (74.01%), Query Frame = 0

Query: 4   KKRKTNDNFSPSFTPNPDSASTTSFLRSSRDQKPLHYTFQIQSFSLLKAALASSNPQRDR 63
           +++  N N  P    + DSAS  S + SSR +KP+HY  +IQSFSLLK  LA S   R R
Sbjct: 5   RRKNKNINVFPKSHGHDDSAS-ASVVTSSRYEKPVHYILKIQSFSLLKEGLACS--PRQR 64

Query: 64  YESQTFNAGGYKWKLALYPNGDEKRNGSDHISLYLVMAEDDVLWTTTSEVNVVFTFLVYN 123
           +ESQ FNAGGY+WKLALYPNGD++R+ SDHISLYLVM  D++L +TTSEVN VFTFLVY+
Sbjct: 65  FESQKFNAGGYEWKLALYPNGDQRRDVSDHISLYLVMVGDNIL-STTSEVNAVFTFLVYD 124

Query: 124 HIRDKYLTVQDGKVRRFHAIKKEWGFEKLVLLDTFNDASSGLLVDDCCAFGVDVIVMKCE 183
            +R KYLTVQDGK+RRF A K EWG EKL+ L+TF DAS+G LVDDCC FGVD+ VM  +
Sbjct: 125 TLRGKYLTVQDGKMRRFSATKTEWGIEKLLPLNTFKDASNGFLVDDCCVFGVDIFVMNSD 184

Query: 184 -GNGEALSLIKQPKDYKFTWKFTNFSKQNLNYYHSDPFTVENYRWYI 230
            G GE  SLI+QP +YK+TWK  NFSK + +    +PFTVEN  W I
Sbjct: 185 VGKGEVFSLIEQPNNYKYTWKLNNFSKLDSSLRECNPFTVENCCWKI 227

BLAST of Spg006859 vs. ExPASy TrEMBL
Match: A0A6J1CX47 (probable inactive serine/threonine-protein kinase fnkC OS=Momordica charantia OX=3673 GN=LOC111015608 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 8.8e-67
Identity = 127/202 (62.87%), Postives = 150/202 (74.26%), Query Frame = 0

Query: 29  LRSSRDQKPLHYTFQIQSFSLLKAALASSNPQRDRYESQTFNAGGYKWKLALYPNGDEKR 88
           +RS+RD+KPLHYT QIQSFSLLKAALASSN  RDRYESQ FNAGGYKWKLA+YPNGD KR
Sbjct: 9   IRSTRDEKPLHYTLQIQSFSLLKAALASSN--RDRYESQIFNAGGYKWKLAVYPNGDVKR 68

Query: 89  NGSDHISLYLVMAEDDVLWTTTSEVNVVFTFLVYNHIRDKYLTVQDGKVRRFHAIKKEWG 148
           NG+DHISLYLV A+DD+                             GKVRRFHA+K EWG
Sbjct: 69  NGADHISLYLVKADDDI------------------------NPCSHGKVRRFHAMKAEWG 128

Query: 149 FEKLVLLDTFNDASSGLLVDDCCAFGVDVIVMKCEGNGEALSLIKQPKDYKFTWKFTNFS 208
           FEKL+ LDTFND+S+G +V DCC FGVDV+VMKC+G GE +S IK+PK +K+TWK  NFS
Sbjct: 129 FEKLISLDTFNDSSNGFVVGDCCGFGVDVVVMKCDGKGEVVSFIKEPKSHKYTWKTKNFS 184

Query: 209 KQNLNYYHSDPFTVENYRWYIF 231
           + +  +Y SDPFTVE YRW ++
Sbjct: 189 QLDKKFYESDPFTVEGYRWKLW 184

BLAST of Spg006859 vs. TAIR 10
Match: AT3G17380.1 (TRAF-like family protein )

HSP 1 Score: 170.6 bits (431), Expect = 1.5e-42
Identity = 92/211 (43.60%), Postives = 127/211 (60.19%), Query Frame = 0

Query: 22  SASTTSFLRSSRDQKPLHYTFQIQSFSLL-KAALASSNPQRDRYESQTFNAGGYKWKLAL 81
           S      ++S  D  P HY  +I+SFSLL K A+       +RYE+++F AGGYKWKL L
Sbjct: 4   SGDYDEIIKSISDAPPTHYMVKIESFSLLTKHAI-------ERYETESFEAGGYKWKLVL 63

Query: 82  YPNGDEKRNGSDHISLYLVMAEDDVLWTTTSEVNVVFTFLVYNHIRDKYLTVQDGKVRRF 141
           YPNG++ +N  DH+S+YL +A+   L +   EV  VF   + +  +D YL +Q G  RRF
Sbjct: 64  YPNGNKSKNTKDHVSVYLSLADSSSL-SPGWEVYAVFRLYLLDQNKDNYLILQ-GNERRF 123

Query: 142 HAIKKEWGFEKLVLLDTFNDASSGLLVDDCCAFGVDVIVMK--CEGNGEALSLIKQPKDY 201
           H++K+EWGF+K +   TF+DAS+G L++D C FG DV V K    G GE LS+IK     
Sbjct: 124 HSVKREWGFDKFIPTGTFSDASNGYLMEDTCMFGADVFVSKERRSGRGECLSMIKDATSS 183

Query: 202 KFTWKFTNFSKQNLNYYHSDPFTVENYRWYI 230
           K  WK  NFSK +   Y S+ F   + +W I
Sbjct: 184 KHVWKIENFSKLDKESYDSNAFFAGDRKWKI 205

BLAST of Spg006859 vs. TAIR 10
Match: AT2G04170.1 (TRAF-like family protein )

HSP 1 Score: 146.0 bits (367), Expect = 3.9e-35
Identity = 79/198 (39.90%), Postives = 112/198 (56.57%), Query Frame = 0

Query: 33  RDQKPLHYTFQIQSFSLLKAALASSNPQRDRYESQTFNAGGYKWKLALYPNGDEKRNGSD 92
           RD++P +    I SFS++K        + + YES  F AGGYKW+L LY NG++   G++
Sbjct: 125 RDERPSNKILTITSFSVIKG-------RGEPYESSVFEAGGYKWRLVLYVNGNQNDGGNN 184

Query: 93  HISLYLVMAEDDVL---WTTTSEVNVVFTFLVYNHIRDKYLTVQDGKVRRFHAIKKEWGF 152
           HISLY+ + E + L   W    EVNV     VYN  + KYL V+DG V+R++  KKEWG+
Sbjct: 185 HISLYVRIEETESLPKGW----EVNVELKLFVYNGKQRKYLIVKDGIVKRYNDAKKEWGY 244

Query: 153 EKLVLLDTFNDASSGLLVDDCCAFGVDVIVMKCEGNGEALSLIKQPKDYKFTWKFTNFSK 212
            KL+ L TF D + G L  D  +FG ++         E ++ I  P +  FTWK  +FS 
Sbjct: 245 GKLIPLTTFLDTNEGYLEQDIASFGAEIFSGTAVQVQEKVTFISNPPNNVFTWKILHFSN 304

Query: 213 QNLNYYHSDPFTVENYRW 228
               +Y+SD F VE+  W
Sbjct: 305 LEDKFYYSDDFLVEDRYW 311

BLAST of Spg006859 vs. TAIR 10
Match: AT2G04170.2 (TRAF-like family protein )

HSP 1 Score: 146.0 bits (367), Expect = 3.9e-35
Identity = 79/198 (39.90%), Postives = 112/198 (56.57%), Query Frame = 0

Query: 33  RDQKPLHYTFQIQSFSLLKAALASSNPQRDRYESQTFNAGGYKWKLALYPNGDEKRNGSD 92
           RD++P +    I SFS++K        + + YES  F AGGYKW+L LY NG++   G++
Sbjct: 125 RDERPSNKILTITSFSVIKG-------RGEPYESSVFEAGGYKWRLVLYVNGNQNDGGNN 184

Query: 93  HISLYLVMAEDDVL---WTTTSEVNVVFTFLVYNHIRDKYLTVQDGKVRRFHAIKKEWGF 152
           HISLY+ + E + L   W    EVNV     VYN  + KYL V+DG V+R++  KKEWG+
Sbjct: 185 HISLYVRIEETESLPKGW----EVNVELKLFVYNGKQRKYLIVKDGIVKRYNDAKKEWGY 244

Query: 153 EKLVLLDTFNDASSGLLVDDCCAFGVDVIVMKCEGNGEALSLIKQPKDYKFTWKFTNFSK 212
            KL+ L TF D + G L  D  +FG ++         E ++ I  P +  FTWK  +FS 
Sbjct: 245 GKLIPLTTFLDTNEGYLEQDIASFGAEIFSGTAVQVQEKVTFISNPPNNVFTWKILHFSN 304

Query: 213 QNLNYYHSDPFTVENYRW 228
               +Y+SD F VE+  W
Sbjct: 305 LEDKFYYSDDFLVEDRYW 311

BLAST of Spg006859 vs. TAIR 10
Match: AT2G04170.3 (TRAF-like family protein )

HSP 1 Score: 146.0 bits (367), Expect = 3.9e-35
Identity = 79/198 (39.90%), Postives = 112/198 (56.57%), Query Frame = 0

Query: 33  RDQKPLHYTFQIQSFSLLKAALASSNPQRDRYESQTFNAGGYKWKLALYPNGDEKRNGSD 92
           RD++P +    I SFS++K        + + YES  F AGGYKW+L LY NG++   G++
Sbjct: 3   RDERPSNKILTITSFSVIKG-------RGEPYESSVFEAGGYKWRLVLYVNGNQNDGGNN 62

Query: 93  HISLYLVMAEDDVL---WTTTSEVNVVFTFLVYNHIRDKYLTVQDGKVRRFHAIKKEWGF 152
           HISLY+ + E + L   W    EVNV     VYN  + KYL V+DG V+R++  KKEWG+
Sbjct: 63  HISLYVRIEETESLPKGW----EVNVELKLFVYNGKQRKYLIVKDGIVKRYNDAKKEWGY 122

Query: 153 EKLVLLDTFNDASSGLLVDDCCAFGVDVIVMKCEGNGEALSLIKQPKDYKFTWKFTNFSK 212
            KL+ L TF D + G L  D  +FG ++         E ++ I  P +  FTWK  +FS 
Sbjct: 123 GKLIPLTTFLDTNEGYLEQDIASFGAEIFSGTAVQVQEKVTFISNPPNNVFTWKILHFSN 182

Query: 213 QNLNYYHSDPFTVENYRW 228
               +Y+SD F VE+  W
Sbjct: 183 LEDKFYYSDDFLVEDRYW 189

BLAST of Spg006859 vs. TAIR 10
Match: AT2G04170.4 (TRAF-like family protein )

HSP 1 Score: 146.0 bits (367), Expect = 3.9e-35
Identity = 79/198 (39.90%), Postives = 112/198 (56.57%), Query Frame = 0

Query: 33  RDQKPLHYTFQIQSFSLLKAALASSNPQRDRYESQTFNAGGYKWKLALYPNGDEKRNGSD 92
           RD++P +    I SFS++K        + + YES  F AGGYKW+L LY NG++   G++
Sbjct: 3   RDERPSNKILTITSFSVIKG-------RGEPYESSVFEAGGYKWRLVLYVNGNQNDGGNN 62

Query: 93  HISLYLVMAEDDVL---WTTTSEVNVVFTFLVYNHIRDKYLTVQDGKVRRFHAIKKEWGF 152
           HISLY+ + E + L   W    EVNV     VYN  + KYL V+DG V+R++  KKEWG+
Sbjct: 63  HISLYVRIEETESLPKGW----EVNVELKLFVYNGKQRKYLIVKDGIVKRYNDAKKEWGY 122

Query: 153 EKLVLLDTFNDASSGLLVDDCCAFGVDVIVMKCEGNGEALSLIKQPKDYKFTWKFTNFSK 212
            KL+ L TF D + G L  D  +FG ++         E ++ I  P +  FTWK  +FS 
Sbjct: 123 GKLIPLTTFLDTNEGYLEQDIASFGAEIFSGTAVQVQEKVTFISNPPNNVFTWKILHFSN 182

Query: 213 QNLNYYHSDPFTVENYRW 228
               +Y+SD F VE+  W
Sbjct: 183 LEDKFYYSDDFLVEDRYW 189

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022146381.12.1e-7567.45ubiquitin carboxyl-terminal hydrolase 13-like [Momordica charantia][more]
XP_038875772.11.2e-7362.98uncharacterized protein LOC120068142 [Benincasa hispida][more]
XP_038874970.19.9e-7364.76uncharacterized protein LOC120067490 [Benincasa hispida][more]
XP_022146382.11.1e-6865.24uncharacterized protein LOC111015610 [Momordica charantia][more]
KAA0050214.13.3e-6868.81MATH domain and coiled-coil domain-containing protein [Cucumis melo var. makuwa]... [more]
Match NameE-valueIdentityDescription
Q9FPT11.0e-1128.65Ubiquitin C-terminal hydrolase 12 OS=Arabidopsis thaliana OX=3702 GN=UBP12 PE=1 ... [more]
A1L4W51.1e-0525.79BTB/POZ and MATH domain-containing protein 6 OS=Arabidopsis thaliana OX=3702 GN=... [more]
O222864.1e-0522.84BTB/POZ and MATH domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=... [more]
Q1EBV66.0e-0422.29BTB/POZ and MATH domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=... [more]
Match NameE-valueIdentityDescription
A0A6J1CZ691.0e-7567.45ubiquitin carboxyl-terminal hydrolase 13-like OS=Momordica charantia OX=3673 GN=... [more]
A0A6J1CZF75.5e-6965.24uncharacterized protein LOC111015610 OS=Momordica charantia OX=3673 GN=LOC111015... [more]
A0A5D3BGH91.6e-6868.81MATH domain and coiled-coil domain-containing protein OS=Cucumis melo var. makuw... [more]
A0A0A0KND86.7e-6760.79Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G432550 PE=4 SV=1[more]
A0A6J1CX478.8e-6762.87probable inactive serine/threonine-protein kinase fnkC OS=Momordica charantia OX... [more]
Match NameE-valueIdentityDescription
AT3G17380.11.5e-4243.60TRAF-like family protein [more]
AT2G04170.13.9e-3539.90TRAF-like family protein [more]
AT2G04170.23.9e-3539.90TRAF-like family protein [more]
AT2G04170.33.9e-3539.90TRAF-like family protein [more]
AT2G04170.43.9e-3539.90TRAF-like family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002083MATH/TRAF domainPFAMPF00917MATHcoord: 61..177
e-value: 5.1E-11
score: 42.7
IPR002083MATH/TRAF domainPROSITEPS50144MATHcoord: 197..238
score: 12.208702
IPR002083MATH/TRAF domainPROSITEPS50144MATHcoord: 37..177
score: 26.987873
IPR002083MATH/TRAF domainCDDcd00121MATHcoord: 199..229
e-value: 2.49632E-5
score: 40.8255
IPR002083MATH/TRAF domainCDDcd00121MATHcoord: 38..177
e-value: 1.33604E-20
score: 82.0418
IPR008974TRAF-likeGENE3D2.60.210.10Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain Acoord: 34..187
e-value: 3.4E-36
score: 126.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 11..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availablePANTHERPTHR46162:SF29SUBFAMILY NOT NAMEDcoord: 23..229
NoneNo IPR availablePANTHERPTHR46162TRAF-LIKE FAMILY PROTEINcoord: 23..229
NoneNo IPR availableSUPERFAMILY49599TRAF domain-likecoord: 37..182
NoneNo IPR availableSUPERFAMILY49599TRAF domain-likecoord: 196..229

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg006859.1Spg006859.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0005515 protein binding