Spg006808 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg006808
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold1: 54881958 .. 54883632 (+)
RNA-Seq ExpressionSpg006808
SyntenySpg006808
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGGAAAACTATCCTAAGGAAATCCATGGCTCAGCAGCACTCCGTCACGCGTTCTGTACACCTTTACCTCTACCTGCAGTTATATGTAAGGGAAAAGAATGAGTATTTAAGGAAATACTCAGTAAGTAACAATACTCCTAGACACTTGCAGCAATCAAGGTTTTAACATTTATTCGAGTTAAGGGCCTAAGGGTTAGGTCATCTCATTCTCATTCATTTCATTTCATTTATCTGTAGTTCGGGTCTCGTGTTCAATTAGCTCACCTATATATATAAGTTTGCCAACTCACTGATAGCGCACAAGTGGGAGTTTTGGGAGGTCTCTACTCCTACTGATAGTAGATGGCACCCAGTCAATGGAGCTAAGTCTCATCCCTCAAGGCACTAATGGGCGCGTAGCGCTCTAAACTACCATTTCACTGGTGGGGCGTTCATGGGTTTAAGTCAGAAATTAACTTCCACAGTTAGTAAATGGCACCTAGTCTGCGAAGCCAAGTCCCGCCCATTAAGTCCCTCATTTCAGTCTAATACATCTCAGTCCCAGGTGTTTAATTGACATGACCCTCTACTAAGGCAACTAGCCTATTCTTTTCCCTTTCTTAATCCTTTTCCCTTTAGGACCCCTTAACACTTAGGCTAACTCTTAACTGCAACCTATTTAATACAATTATCTTCTTTTCGTAGACTTCCGACAGCTAACTGGTATGTACCATCCCAACCCAGTCACATCTTAAGAACAAGAAACGAAGGCGACGACCAACACTCCTAAACAGAGAAACCACAAACTTCCCGTTGTCCACCAACAATGCCAGTCAACTTATAATATAAAACAGTCAAGCACTCTCACCTATCACATAGCACAAGTACACAACAACCAAATTCTTGAAGACCAACGCATACATATCATCTCAATCTCAACTTCAATATTTGATACCAACTCATGCTAGAAGTTAACAGTCATTTCAATGCAAAAACATTTCATTCCAAAGCAGCAAGTTACTTACTTTGTGGTAACTACGCTTGATTGAAATCACTCAAACAACTTGATGCAACGCCAACCACGTGATGCGAAATAATAGTCTATTAACACATAAAATATATTCACACATCAGAGGCATATCAATCTCAATAATTTCCTAGAACACAAGACTTGAGAGGGTCGAAAACTCACCCAAGTGAAACTACTGCTCGCTGTCCAATTTCCAATTTCGCTCCGCCTTTACGAATTCGGCCACCACTCACTACGAACACCTTGGATTAAGCCTCAACATTACTGGGTATACCATTAAAGGATAAAAGACTACTTAGATCTGAAACTTACGCCCTTCTTACCAACTGTTTGATTAATCAAATCGTCGAACGCTCAAGATCTAAAGCGACTCGAGGCGGCGTACAACTATTCGGCTGAAGATGGCAGCGGCGTGCGGCTGTCTAAAATGAAGAAGGCGGCGGTGAGAGAGAACCGAGAGAGTGAGAGAACTGCGAGGGAGAGAGAGAACCGAGAGAGTGAGAGAACTGTGAGGGAGAGAGAGAGAGAGCCGAAAACGAGAGAGATAGAAATTACTTACCGGCGGTGGCGGCGCGACGGCGAGAGGCGACTTGCGGCGATGAACGACGGCGAGAGGCGGCGTAGGCAGCTGCGTGATGCAGCGAGGAAGAGAGAGCTGAGATGA

mRNA sequence

ATGCGGAAAACTATCCTAAGGAAATCCATGGCTCAGCAGCACTCCGTCACGCGTTCTGTACACCTTTACCTCTACCTGCAGTTATATGTAAGGGAAAAGAATGAGTATTTAAGGAAATACTCACTAACTGATCTAAAGCGACTCGAGGCGGCGTACAACTATTCGGCTGAAGATGGCAGCGGCGTGCGGCTGTCTAAAATGAAGAAGGCGGCGGTGAGAGAGAACCGAGAGAGTGAGAGAACTGCGAGGGAGAGAGAGAACCGAGAGAGTGAGAGAACTGTGAGGGAGAGAGAGAGAGAGCCGAAAACGAGAGAGATAGAAATTACTTACCGGCGGTGGCGGCGCGACGGCGAGAGGCGACTTGCGGCGATGAACGACGGCGAGAGGCGGCGTAGGCAGCTGCGTGATGCAGCGAGGAAGAGAGAGCTGAGATGA

Coding sequence (CDS)

ATGCGGAAAACTATCCTAAGGAAATCCATGGCTCAGCAGCACTCCGTCACGCGTTCTGTACACCTTTACCTCTACCTGCAGTTATATGTAAGGGAAAAGAATGAGTATTTAAGGAAATACTCACTAACTGATCTAAAGCGACTCGAGGCGGCGTACAACTATTCGGCTGAAGATGGCAGCGGCGTGCGGCTGTCTAAAATGAAGAAGGCGGCGGTGAGAGAGAACCGAGAGAGTGAGAGAACTGCGAGGGAGAGAGAGAACCGAGAGAGTGAGAGAACTGTGAGGGAGAGAGAGAGAGAGCCGAAAACGAGAGAGATAGAAATTACTTACCGGCGGTGGCGGCGCGACGGCGAGAGGCGACTTGCGGCGATGAACGACGGCGAGAGGCGGCGTAGGCAGCTGCGTGATGCAGCGAGGAAGAGAGAGCTGAGATGA

Protein sequence

MRKTILRKSMAQQHSVTRSVHLYLYLQLYVREKNEYLRKYSLTDLKRLEAAYNYSAEDGSGVRLSKMKKAAVRENRESERTARERENRESERTVREREREPKTREIEITYRRWRRDGERRLAAMNDGERRRRQLRDAARKRELR
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 68..88
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..101
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..144
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..101

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg006808.1Spg006808.1mRNA