Spg006552 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGGCCGCCGGAAATAACGAGCTTCACTGGAAGTACCTATCGCCGGCGTCGGAGTTGCGGGAGGTTGACTGGCCGGACGAAGAAGAAGAAAAAAAATGAATGGGGGAAGGGGTTGGGCGGTTGGGATGTGAAGATGATGAGGAATTTGACAGTTTTGACCCCCTCAGCTTTTTGGTTTGTAAATTTAACCCCCTCAGTTTTTATTTGGTTTTTTAGGTTATTTTAATTTTTATTTGGATGTGAAATTACGAAACTGCCCCTGAACAATTTAAAACTCTTTCTCTTCCAAACACAAACGGCGTTCCCTTTCATCTTCTCCCTCATTTCATCCGTTGCTCCCTCTCGTCTTCTCCCTCATTTCAGCTTCGATTTCCAGCGATTTCTTGCGTGCATTTGGTGTAAGAACAACTTAGGCACTCATTTTAGCTTTAAGGTATGATTTTTTCGCTTTATTTTACGGTTTTCTAGGGTTTTGAAGCATTTTATGTAGTCTAGGATCGTTTGGCCAAATTTCGTGTAGTTTAGTATGAGTTTAGTGCACAAATGTTATTTTCGGCGCTTTCTGACTGTGTTGTGATGAAAAACGGGGCTGATTTTCGTCTGGGTTGGTTGGGATTTTGATTTGCAGTCAAAGCATCCCGGCCGGGATGCATACCAGGGGGCCGAGAAAGTGGACCGGGAAGGGATTTTTTGAAAACCATAAACCTCGTCCTCGGCCGATCGATTTGGCCGGAAATCAACGAATGGTTTATTTTTTAAAAATTTTTAAATTTTTGTTTTGTTTTTTTTTTGTTTTGTTTTTTTTTTTACTTTTTTGATTTACTCAGGCATTTTGTTGTTGAAATTATAATTTTGGACCGTAAAGAAGTTACTCCATAAAAAAATTTTTACTTTTTTATTTTTTTTGAAATTATTGGTTGTTGTTTGTCAATAGGGTTTACCATCATGGCATTGGTACCAAAATTGCACCCGCCGACTACTTCCCTGCTGCTTTGACATGTTGTTCACATCTATGGAAAACAGTTAAAAATATTAAGGATAAATTAACTGATACCCAGTTAGGAATGTTTAGGCAGACATGTTTTGGACATTTCTTAGATAGATCCTTGATGTTTAATGGACAGCTTATTCATTATTTTCTTTTGAGGGAAGTGAATGAGCCTAGGATTGATGAGCTTTGAGATTCTGGGAGAGAAAGTTTCATTTGGTCGGAGGGAATTTGACCTTATCACTGGAATTAGGCATAGGACCCAACATGTTAGGGGTAATGTATCTAGTACTAGACTGAGAAGACTGTACCTTAACGATAACATCACCATGAAAGGGTTTGAACTAGATAGATTATTCCCTAACATTAATTTTGAGAGCGACGAGGATGCTGTGAAGATGGCCATATTTTATTTCATTGAGTTGGCTATGATGGGGAGGGAGAGAAAGCAGCAGATGGACACTAGCCTGCTCGACATTATTGATGATTGGCAAAGGTTTTGTAATGAGGATTGGAGTAAGCTCATTTTTTATAAGACCATCAAGGGACTTAAGAAGGCATTAGGTGGGAAGGCAGTGTCCTATAAAGAGAGGACGGATGGCAAACAGGAAACGTACAGTCTGTATGGCTTCCCATACGCGTTTCAGGTACGTTGGTTTAGAGTGATTGATAGTTGTATACTTTCTCGATATATATTGTATCTCTAACAATATACTTTCCTTACGTACACAGGTATGGACATACGAGACTGTATCTTCGTTGACCGGGCGTGTGGCTAATCGCCTGAATGACAATGTCATTCCACGTATATTAAGATGGTCATGTAGCCACTCACCCACACTTGCAGCACTGAGTCAGGAGGTGTTTTCTTCAGATATGGTATGTTGAATATATTTTATATGCATTCATTCAATTTAAGTTTAGTAGGTTTATTTTTTTTATTTCCCTTTTCCGTGTAGGCTAGGGTCACAACCAAACTTGTGGCCTCAGAAGAGGAGATCCAATTTATGGATCGTGTGATGCAGCCACCTCGAGCACCACCTCCACCTCCACCTCCACCTCCACCTCCACCTCCACCTCCACCCCCAGAAGCTTTGAAAGATATTCCAGATGAAGATACTATCGTTGAGGATCTCGGGACTGAATACAAATGA ATGAAGGCCGCCGGAAATAACGAGCTTCACTGGAAGTACCTATCGCCGGCGTCGGAGTTGCGGGAGAGCGACGAGGATGCTGTGAAGATGGCCATATTTTATTTCATTGAGTTGGCTATGATGGGGAGGGAGAGAAAGCAGCAGATGGACACTAGCCTGCTCGACATTATTGATGATTGGCAAAGGTTTTGTAATGAGGATTGGAGTAAGCTCATTTTTTATAAGACCATCAAGGGACTTAAGAAGGCATTAGGTGGGAAGGCAGTGTCCTATAAAGAGAGGACGGATGGCAAACAGGAAACGTACAGTCTGTATGGCTTCCCATACGCGTTTCAGGTATGGACATACGAGACTGTATCTTCGTTGACCGGGCGTGTGGCTAATCGCCTGAATGACAATGTCATTCCACGTATATTAAGATGGTCATGTAGCCACTCACCCACACTTGCAGCACTGAGTCAGGAGGTGTTTTCTTCAGATATGGCTAGGGTCACAACCAAACTTGTGGCCTCAGAAGAGGAGATCCAATTTATGGATCGTGTGATGCAGCCACCTCGAGCACCACCTCCACCTCCACCTCCACCTCCACCTCCACCTCCACCTCCACCCCCAGAAGCTTTGAAAGATATTCCAGATGAAGATACTATCGTTGAGGATCTCGGGACTGAATACAAATGA ATGAAGGCCGCCGGAAATAACGAGCTTCACTGGAAGTACCTATCGCCGGCGTCGGAGTTGCGGGAGAGCGACGAGGATGCTGTGAAGATGGCCATATTTTATTTCATTGAGTTGGCTATGATGGGGAGGGAGAGAAAGCAGCAGATGGACACTAGCCTGCTCGACATTATTGATGATTGGCAAAGGTTTTGTAATGAGGATTGGAGTAAGCTCATTTTTTATAAGACCATCAAGGGACTTAAGAAGGCATTAGGTGGGAAGGCAGTGTCCTATAAAGAGAGGACGGATGGCAAACAGGAAACGTACAGTCTGTATGGCTTCCCATACGCGTTTCAGGTATGGACATACGAGACTGTATCTTCGTTGACCGGGCGTGTGGCTAATCGCCTGAATGACAATGTCATTCCACGTATATTAAGATGGTCATGTAGCCACTCACCCACACTTGCAGCACTGAGTCAGGAGGTGTTTTCTTCAGATATGGCTAGGGTCACAACCAAACTTGTGGCCTCAGAAGAGGAGATCCAATTTATGGATCGTGTGATGCAGCCACCTCGAGCACCACCTCCACCTCCACCTCCACCTCCACCTCCACCTCCACCTCCACCCCCAGAAGCTTTGAAAGATATTCCAGATGAAGATACTATCGTTGAGGATCTCGGGACTGAATACAAATGA MKAAGNNELHWKYLSPASELRESDEDAVKMAIFYFIELAMMGRERKQQMDTSLLDIIDDWQRFCNEDWSKLIFYKTIKGLKKALGGKAVSYKERTDGKQETYSLYGFPYAFQVWTYETVSSLTGRVANRLNDNVIPRILRWSCSHSPTLAALSQEVFSSDMARVTTKLVASEEEIQFMDRVMQPPRAPPPPPPPPPPPPPPPPPEALKDIPDEDTIVEDLGTEYK Homology
BLAST of Spg006552 vs. NCBI nr
Match: XP_022157020.1 (uncharacterized protein LOC111023847 [Momordica charantia]) HSP 1 Score: 180.6 bits (457), Expect = 1.5e-41 Identity = 89/156 (57.05%), Postives = 114/156 (73.08%), Query Frame = 0
BLAST of Spg006552 vs. NCBI nr
Match: XP_022154965.1 (uncharacterized protein LOC111022110 [Momordica charantia]) HSP 1 Score: 160.6 bits (405), Expect = 1.6e-35 Identity = 86/158 (54.43%), Postives = 111/158 (70.25%), Query Frame = 0
BLAST of Spg006552 vs. NCBI nr
Match: XP_022153201.1 (uncharacterized protein LOC111020757 [Momordica charantia]) HSP 1 Score: 149.8 bits (377), Expect = 2.8e-32 Identity = 97/203 (47.78%), Postives = 125/203 (61.58%), Query Frame = 0
BLAST of Spg006552 vs. NCBI nr
Match: XP_022158673.1 (uncharacterized protein LOC111025136 [Momordica charantia]) HSP 1 Score: 138.7 bits (348), Expect = 6.4e-29 Identity = 64/136 (47.06%), Postives = 94/136 (69.12%), Query Frame = 0
BLAST of Spg006552 vs. NCBI nr
Match: KGN49944.1 (hypothetical protein Csa_000148 [Cucumis sativus]) HSP 1 Score: 135.6 bits (340), Expect = 5.4e-28 Identity = 69/160 (43.12%), Postives = 104/160 (65.00%), Query Frame = 0
BLAST of Spg006552 vs. ExPASy TrEMBL
Match: A0A6J1DRZ7 (uncharacterized protein LOC111023847 OS=Momordica charantia OX=3673 GN=LOC111023847 PE=4 SV=1) HSP 1 Score: 180.6 bits (457), Expect = 7.1e-42 Identity = 89/156 (57.05%), Postives = 114/156 (73.08%), Query Frame = 0
BLAST of Spg006552 vs. ExPASy TrEMBL
Match: A0A6J1DL40 (uncharacterized protein LOC111022110 OS=Momordica charantia OX=3673 GN=LOC111022110 PE=4 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 7.6e-36 Identity = 86/158 (54.43%), Postives = 111/158 (70.25%), Query Frame = 0
BLAST of Spg006552 vs. ExPASy TrEMBL
Match: A0A6J1DJX9 (uncharacterized protein LOC111020757 OS=Momordica charantia OX=3673 GN=LOC111020757 PE=4 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 1.3e-32 Identity = 97/203 (47.78%), Postives = 125/203 (61.58%), Query Frame = 0
BLAST of Spg006552 vs. ExPASy TrEMBL
Match: A0A6J1DWS4 (uncharacterized protein LOC111025136 OS=Momordica charantia OX=3673 GN=LOC111025136 PE=4 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 3.1e-29 Identity = 64/136 (47.06%), Postives = 94/136 (69.12%), Query Frame = 0
BLAST of Spg006552 vs. ExPASy TrEMBL
Match: A0A0A0KM59 (DUF1985 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G141180 PE=4 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 2.6e-28 Identity = 69/160 (43.12%), Postives = 104/160 (65.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
|