Spg006543 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg006543
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description40S ribosomal protein SA
Locationscaffold9: 18333771 .. 18336452 (-)
RNA-Seq ExpressionSpg006543
SyntenySpg006543
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGACTGGAGCTGCACCGCCGCGTCAACTCTCACAGAAGGAGGCCGACATTCAGATGATGTTGGCCGCCGAGGTCCATCTTGGCACCAAAAACTGCGATTTTCAAATGGAACGATACGTTTTCAAGCGCCGGAATGATGGTATGCTTTCAATCTACTCGCCTATAGATCTTCGCACTTGGGTTAGTCGAATTGTTTTTCCTTCTTCTCGGTGATTTTCGCTTGGACTGATACTGCAAGTGTGAATGGGCGTGTTGTTGTTCCTAAAGTTGTTTCCCTAGAATTTTTCAGAAACATGTAGTGATTAAAATTTCATTCACTTGTCTTTTCCTTGGTTAAACTTGAGTTTGAAGCTTCAGTCTCTGGCTATTGTTCTGTTTATCTCTTTGATTTTACTATATTTTCCGAGGACCTACTATTGAATATTCTCCAAATTATTCTTCGATGGGTGCTGTTTCGAATTTTATCGCTGAATGTTGATTAATACAGTTTCAGAAATGAACAACTGCTCTACGTGTTGAACTGATGAACTTAGCTAGTCTACTTGGTTCTGATAATCGGTTTTCTTTAGTCTGTTGTACGAAAGGAATGTTGAGCTTATTAAAGGCTCAATGGGGATTATCTTTATGATATGAATACGTTAGGTTATTTGAATAGTTGTATTATTGTCGTGTATGCCTTTTCTTTTTAAAAATTCTCCTTTTTTTCAGGAATCTACATCATTAACCTTGGAAAAACATGGGAGAAACTTCAGTTGGCTGCTAGGGTGATTGTAGCTATCGAGAACCCTCAAGACATCATTGTTCAGTCTGCTAGACCTTATGGTCAGAGGGCTGTTTTGAAGTTTGCTCAACACACTGGTGCTCATGCAATTGCCGGGAGACACACTCCCGGAACATTTACCAACCAGCTTCAGACCTCATTCAATGAACCACGTCTTCTTATACTTACTGATCCTAGAACTGATCATCAGGTGTTTAATTAAGAAATGAAGAATAGTTCATGGTTTTGAATTAAGTCCTAAAAGAACGGTCTAATACTGTCAATTATGATTCAACTCATGCTTGTTCCTTAGATTTATTTTTGGTTGGGATCACTTGATGCCCTTGTTTATTGACGTTGCCTTGTTGATTCTGACTTGCAGCCCATTAAGGAAGCTGCCCTTGGGAACATTCCTACAATAGCCTTTTGTGACACTGATTCCCCAATGCGGTATGTTGATATTGGAATCCCGGCTAACAACAAGGGGAAACATAGCATAGGGTGTCTGTTCTGGCTTTTGGCAAGGATGGTTCTACAAATGCGTGGAACAATTCGTGCTGGGCACAAATGGGATGTGATGGTAAATTCCAAATTTGATTTTCTGTTTGGACTTTAGAGACCACATTTTGACTTAAAATTTTAAATTAATAATTATTCTTGGGAACTTGTTTCCCTGTGTAGGTGGATTTGTTTTTCTATCGTGAGCCTGAGGAGGCTAAGGAGCAAGAAGAGGAAGAGGCTCTTCCGCCCCCAGATTTTGGTATTGCAGATTATGGTGCTGCTCCACTTGTTGCTTCAGAACAATGGTCTGCACAAATTCCTGATGCTCAGTGGGGTGCCGCAGATGTGGTGCCTGCTGCTGCTCCACCTGCTTCCAGTGTCGAGTGGACTCAAGAGACAGGTTGAATCTGAGCTTTTGATTTTAATCGTTTATTTGAATATCTATCTGCCCTAGGTGTGCTTATTCATGTAAGCTAGCTTTGGTCTCTTTGAAGAACTTATTCCACTCAATTTAGACAAGTCATTTTGTTTGCTTTCCATATGAAGATTTTGACTAGTACCTACCTATCATTTTCAAATACCCTGTTCCTTTGTCTCCACGTTATTTGCATCTTAGACATTGACGACCAGAAGATGTAAGATGCCACTGGTTGGGGCTCGGTGTCAGGTTGGTTGTTCTGTTTGAGGTGAACAGAAGAAAATGGAAGTGTCTTTGGATTTAGGATCTTATTGCATAGACTATGTTGGGAAGTCTTTAACCTTGACAAAAGTGCTTTTAGATGGTTAAAAGTACTTAACACAAATATTTATGCTTCTACCACTTAGTTCTTCCAGAAAAGCAATTGATAGTATGCTTAATTAAGTGCTTTGGCTTAAACACTTCAATTTTTAATCTCTTATATCATTATATGTTTTTCCCACTTACACTTTCCATACATTCTCACATTCTCACTTTTTTTTTATTAATTGCAGTTGCCTTGGCAGCAGATGGATGGGATGCTGCAGCACCACCAGCACCAGCACCAGCACCCGCACCCGCACCCGCACCTGCTGTTGACGGTGCGCCAGCTGCCAGTTGGTTTTGAGAGATAGATGGTTCCTAACGAATTGTACTCAAATGGATTAATTATTATGAGTTTGCTTGTTTATTTAGGAATGTCACCCTTCTATTTTGGTTGGAAAATCGACTCAATTTTTTTCATAGTCCAGTTTTAGATTTTAAGGGTTAAATTCTCTACTCTGTTACATCTTCGGTATCTCGGTACAAGTTTTTTTTTGTGATATATGAGAAATTACGTACGTACCTAAGTATAGTAGACTTCCATACAAATAATATATTAATTTTGGGTGGTAGAAGGTCCATGTTTCAATTGAAAGTTTTGCTGAAATGAGCATAATACTTAGATTTGACATTAGTG

mRNA sequence

ATGGCGACTGGAGCTGCACCGCCGCGTCAACTCTCACAGAAGGAGGCCGACATTCAGATGATGTTGGCCGCCGAGGTCCATCTTGGCACCAAAAACTGCGATTTTCAAATGGAACGATACGTTTTCAAGCGCCGGAATGATGGAATCTACATCATTAACCTTGGAAAAACATGGGAGAAACTTCAGTTGGCTGCTAGGGTGATTGTAGCTATCGAGAACCCTCAAGACATCATTGTTCAGTCTGCTAGACCTTATGGTCAGAGGGCTGTTTTGAAGTTTGCTCAACACACTGGTGCTCATGCAATTGCCGGGAGACACACTCCCGGAACATTTACCAACCAGCTTCAGACCTCATTCAATGAACCACGTCTTCTTATACTTACTGATCCTAGAACTGATCATCAGCCCATTAAGGAAGCTGCCCTTGGGAACATTCCTACAATAGCCTTTTGTGACACTGATTCCCCAATGCGGTATGTTGATATTGGAATCCCGGCTAACAACAAGGGGAAACATAGCATAGGGTGTCTGTTCTGGCTTTTGGCAAGGATGGTTCTACAAATGCGTGGAACAATTCGTGCTGGGCACAAATGGGATGTGATGGTGGATTTGTTTTTCTATCGTGAGCCTGAGGAGGCTAAGGAGCAAGAAGAGGAAGAGGCTCTTCCGCCCCCAGATTTTGGTATTGCAGATTATGGTGCTGCTCCACTTGTTGCTTCAGAACAATGGTCTGCACAAATTCCTGATGCTCAGTGGGGTGCCGCAGATGTGGTGCCTGCTGCTGCTCCACCTGCTTCCAGTGTCGAGTGGACTCAAGAGACAGTTGCCTTGGCAGCAGATGGATGGGATGCTGCAGCACCACCAGCACCAGCACCAGCACCCGCACCCGCACCCGCACCTGCTGTTGACGGTGCGCCAGCTGCCAGTTGGTTTTGA

Coding sequence (CDS)

ATGGCGACTGGAGCTGCACCGCCGCGTCAACTCTCACAGAAGGAGGCCGACATTCAGATGATGTTGGCCGCCGAGGTCCATCTTGGCACCAAAAACTGCGATTTTCAAATGGAACGATACGTTTTCAAGCGCCGGAATGATGGAATCTACATCATTAACCTTGGAAAAACATGGGAGAAACTTCAGTTGGCTGCTAGGGTGATTGTAGCTATCGAGAACCCTCAAGACATCATTGTTCAGTCTGCTAGACCTTATGGTCAGAGGGCTGTTTTGAAGTTTGCTCAACACACTGGTGCTCATGCAATTGCCGGGAGACACACTCCCGGAACATTTACCAACCAGCTTCAGACCTCATTCAATGAACCACGTCTTCTTATACTTACTGATCCTAGAACTGATCATCAGCCCATTAAGGAAGCTGCCCTTGGGAACATTCCTACAATAGCCTTTTGTGACACTGATTCCCCAATGCGGTATGTTGATATTGGAATCCCGGCTAACAACAAGGGGAAACATAGCATAGGGTGTCTGTTCTGGCTTTTGGCAAGGATGGTTCTACAAATGCGTGGAACAATTCGTGCTGGGCACAAATGGGATGTGATGGTGGATTTGTTTTTCTATCGTGAGCCTGAGGAGGCTAAGGAGCAAGAAGAGGAAGAGGCTCTTCCGCCCCCAGATTTTGGTATTGCAGATTATGGTGCTGCTCCACTTGTTGCTTCAGAACAATGGTCTGCACAAATTCCTGATGCTCAGTGGGGTGCCGCAGATGTGGTGCCTGCTGCTGCTCCACCTGCTTCCAGTGTCGAGTGGACTCAAGAGACAGTTGCCTTGGCAGCAGATGGATGGGATGCTGCAGCACCACCAGCACCAGCACCAGCACCCGCACCCGCACCCGCACCTGCTGTTGACGGTGCGCCAGCTGCCAGTTGGTTTTGA

Protein sequence

MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVASEQWSAQIPDAQWGAADVVPAAAPPASSVEWTQETVALAADGWDAAAPPAPAPAPAPAPAPAVDGAPAASWF
Homology
[Close]
BLAST of Spg006543 vs. NCBI nr
Match: XP_038886558.1 (40S ribosomal protein SA-like [Benincasa hispida])

HSP 1 Score: 564.7 bits (1454), Expect = 5.0e-157
Identity = 285/312 (91.35%), Postives = 291/312 (93.27%), Query Frame = 0 

Query: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60
           MATGAAPPRQL+QKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK
Sbjct: 1   MATGAAPPRQLAQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60

Query: 61  LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120
           LQLAARVIV IENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN
Sbjct: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120

Query: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180
           EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180

Query: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVAS 240
           LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKE EEEEALPPPDFGIADYGAAPLV +
Sbjct: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEALPPPDFGIADYGAAPLVGA 240

Query: 241 EQWSAQIPDAQWGAADVVPAAA-PPASSVEWTQETVALAADGWDAAAPPAPAPAPAPAPA 300
           +QW+AQIPDAQWGA D VPAAA PPAS+VEW QE VALAADGWDAA PP PA   A A A
Sbjct: 241 DQWTAQIPDAQWGAGDAVPAAAVPPASNVEWAQEPVALAADGWDAAVPPVPAADGAVAAA 300

Query: 301 PAVDGAPAASWF 312
           P      +ASWF
Sbjct: 301 PPPPS--SASWF 310

[Close]
BLAST of Spg006543 vs. NCBI nr
Match: XP_022932088.1 (40S ribosomal protein SA-like [Cucurbita moschata] >KAG7037204.1 40S ribosomal protein SA [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 555.4 bits (1430), Expect = 3.0e-154
Identity = 285/314 (90.76%), Postives = 289/314 (92.04%), Query Frame = 0 

Query: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60
           MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEK
Sbjct: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEK 60

Query: 61  LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120
           LQLAARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSFN
Sbjct: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFN 120

Query: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180
           EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180

Query: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVAS 240
           LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKE+EEEEALPPPDFGIADYGAAPLVAS
Sbjct: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVAS 240

Query: 241 EQWSAQIPDAQWGAAD-VVPAAA----PPASSVEWTQETVALAADGWDAAAPPAPAPAPA 300
           +QWSAQIPDAQWGAAD VVPAAA    PP SSVEWT E  ALAADGWDAA  P       
Sbjct: 241 DQWSAQIPDAQWGAADVVVPAAAAAAIPPPSSVEWTSEPAALAADGWDAAVAP------- 300

Query: 301 PAPAPAVDGAPAAS 310
           P  APAVDGA   S
Sbjct: 301 PLSAPAVDGAAPPS 307

[Close]
BLAST of Spg006543 vs. NCBI nr
Match: KAG6607580.1 (40S ribosomal protein SA, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 555.1 bits (1429), Expect = 3.9e-154
Identity = 285/315 (90.48%), Postives = 289/315 (91.75%), Query Frame = 0 

Query: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60
           MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEK
Sbjct: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEK 60

Query: 61  LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120
           LQLAARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSFN
Sbjct: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFN 120

Query: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180
           EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180

Query: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVAS 240
           LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKE+EEEEALPPPDFGIADYGAAPLVAS
Sbjct: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVAS 240

Query: 241 EQWSAQIPDAQWGAAD-VVPAAA-----PPASSVEWTQETVALAADGWDAAAPPAPAPAP 300
           +QWSAQIPDAQWGAAD VVPAAA     PP SSVEWT E  ALAADGWDAA  P      
Sbjct: 241 DQWSAQIPDAQWGAADVVVPAAAAAAAIPPPSSVEWTSEPAALAADGWDAAVAP------ 300

Query: 301 APAPAPAVDGAPAAS 310
            P  APAVDGA   S
Sbjct: 301 -PLSAPAVDGAAPPS 308

[Close]
BLAST of Spg006543 vs. NCBI nr
Match: XP_022972886.1 (40S ribosomal protein SA-like [Cucurbita maxima])

HSP 1 Score: 554.7 bits (1428), Expect = 5.1e-154
Identity = 283/314 (90.13%), Postives = 287/314 (91.40%), Query Frame = 0 

Query: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60
           MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEK
Sbjct: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEK 60

Query: 61  LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120
           LQLAARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSFN
Sbjct: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFN 120

Query: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180
           EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180

Query: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVAS 240
           LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKE+EEEEALPPPDFGIADYGAAPLVAS
Sbjct: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVAS 240

Query: 241 EQWSAQIPDAQWGAADVV-----PAAAPPASSVEWTQETVALAADGWDAAAPPAPAPAPA 300
           +QWSAQIPDAQWGAADVV      AA PP SSVEWT E  ALAADGWDAA  P       
Sbjct: 241 DQWSAQIPDAQWGAADVVVPAATAAAIPPPSSVEWTSEPAALAADGWDAAVSP------- 300

Query: 301 PAPAPAVDGAPAAS 310
           P  APAVDGA   S
Sbjct: 301 PLSAPAVDGAAPPS 307

[Close]
BLAST of Spg006543 vs. NCBI nr
Match: XP_023525392.1 (40S ribosomal protein SA-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 553.9 bits (1426), Expect = 8.8e-154
Identity = 285/318 (89.62%), Postives = 289/318 (90.88%), Query Frame = 0 

Query: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60
           MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEK
Sbjct: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEK 60

Query: 61  LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120
           LQLAARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSFN
Sbjct: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFN 120

Query: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180
           EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180

Query: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVAS 240
           LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKE+EEEEALPPPDFGIADYGAAPLVAS
Sbjct: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVAS 240

Query: 241 EQWSAQIPDAQWGAAD-VVPAAA--------PPASSVEWTQETVALAADGWDAAAPPAPA 300
           +QWSAQIPDAQWGAAD VVPAAA        PP SSVEWT E  ALAADGWDAA  P   
Sbjct: 241 DQWSAQIPDAQWGAADVVVPAAAAAAAAAAIPPPSSVEWTSEPAALAADGWDAAVAP--- 300

Query: 301 PAPAPAPAPAVDGAPAAS 310
               P  APAVDGA   S
Sbjct: 301 ----PLSAPAVDGAAPPS 311

[Close]
BLAST of Spg006543 vs. ExPASy Swiss-Prot
Match: O22518 (40S ribosomal protein SA OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 458.8 bits (1179), Expect = 5.0e-128
Identity = 240/308 (77.92%), Postives = 251/308 (81.49%), Query Frame = 0 

Query: 5   AAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLA 64
           AAPPRQLSQKEADIQMMLAA+VHLGTKNCDFQMERY+FKRRNDGIYIINLGKTWEKLQLA
Sbjct: 9   AAPPRQLSQKEADIQMMLAADVHLGTKNCDFQMERYIFKRRNDGIYIINLGKTWEKLQLA 68

Query: 65  ARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEPRL 124
           ARVIVAIENPQDIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSF+EPRL
Sbjct: 69  ARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRL 128

Query: 125 LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM 184
           LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM
Sbjct: 129 LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM 188

Query: 185 VLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVASEQWS 244
           VLQMRGTIR G KWDVMVDLFFYREPEEAK+QEEEEA P  D+ I D+ A  + A  QW 
Sbjct: 189 VLQMRGTIRPGLKWDVMVDLFFYREPEEAKQQEEEEA-PAVDYAITDFNAGAIAADGQWP 248

Query: 245 AQIPDAQWGAADVVPAAAPPASSVEWTQETVALAADG--WDAAAPPAPAPAPAPAPAPAV 304
             I D  W  +D VP   P    V W     A AA G  W  A PP   P   P P   +
Sbjct: 249 GTI-DQSW--SDAVPQPIPAVPGVNWGAPAEAPAAAGGDWGEAVPP---PQQIPVPPSGI 308

Query: 305 DGAPAASW 311
           D    + W
Sbjct: 309 DTVQPSGW 309

[Close]
BLAST of Spg006543 vs. ExPASy Swiss-Prot
Match: O80377 (40S ribosomal protein SA OS=Daucus carota OX=4039 GN=179B PE=2 SV=1)

HSP 1 Score: 455.7 bits (1171), Expect = 4.3e-127
Identity = 242/302 (80.13%), Postives = 260/302 (86.09%), Query Frame = 0 

Query: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60
           MA+GA   R+LS  EADIQMM AAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK
Sbjct: 1   MASGA---RELSTMEADIQMMCAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60

Query: 61  LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120
           L LAARVIV+IENPQDIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSF+
Sbjct: 61  LMLAARVIVSIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFS 120

Query: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180
           EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180

Query: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVAS 240
           LARMVLQMRG I  GHKW+VMVDLFFYREPEE K+QEEE+ LP  D+ +ADY AAP+  +
Sbjct: 181 LARMVLQMRGVISQGHKWEVMVDLFFYREPEETKDQEEED-LPVGDY-VADYAAAPIGGA 240

Query: 241 EQWSAQIPDAQWGAADVVPA-AAPPASSVEWTQETVALAADGWD-AAAPPAPAPAPAPAP 300
           +QW+A IPDAQWG   V PA +A PA +  WT +   +A DGWD AAAPP P       P
Sbjct: 241 DQWNA-IPDAQWGGDVVQPANSAVPAGT--WT-DAGPIAGDGWDAAAAPPVPGAVGLDVP 293

[Close]
BLAST of Spg006543 vs. ExPASy Swiss-Prot
Match: A5BUU4 (40S ribosomal protein SA OS=Vitis vinifera OX=29760 GN=GSVIVT00034021001 PE=3 SV=1)

HSP 1 Score: 454.5 bits (1168), Expect = 9.5e-127
Identity = 240/315 (76.19%), Postives = 250/315 (79.37%), Query Frame = 0 

Query: 5   AAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLA 64
           A P R LSQKE DIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQLA
Sbjct: 2   ATPTRALSQKEQDIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLA 61

Query: 65  ARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEPRL 124
           ARVIVAIENP+DIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSF+EPRL
Sbjct: 62  ARVIVAIENPKDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRL 121

Query: 125 LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM 184
           LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM
Sbjct: 122 LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM 181

Query: 185 VLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEALPPPDFGIADYGAAPL--VASEQ 244
           VLQMR TI  GHKWDVMVDLFFYREPEE KEQE +E +  PD+GI DY A  L  +    
Sbjct: 182 VLQMRRTIAPGHKWDVMVDLFFYREPEEPKEQEGDEVVAAPDYGITDYQATALGGLGGGD 241

Query: 245 WSAQIPDA-QWGAADVVPAAAPPASSVEW-----TQETVALAADGWDAAAPPAPAPAPAP 304
           W A I DA QWGA     A  P      W         V +A DGWDAAA P     P  
Sbjct: 242 WGAPITDAPQWGADVPAVAPIPAVPGSNWGDAAPMPSAVPIATDGWDAAAAP-----PVA 301

Query: 305 APAPAVDGA-PAASW 311
            P P V+G  P A W
Sbjct: 302 VPPPVVEGVPPPAGW 311

[Close]
BLAST of Spg006543 vs. ExPASy Swiss-Prot
Match: Q08682 (40S ribosomal protein Sa-1 OS=Arabidopsis thaliana OX=3702 GN=RPSaA PE=1 SV=3)

HSP 1 Score: 445.3 bits (1144), Expect = 5.8e-124
Identity = 225/295 (76.27%), Postives = 250/295 (84.75%), Query Frame = 0 

Query: 1   MAT-GAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWE 60
           MAT G+A   QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWE
Sbjct: 1   MATNGSASSAQLSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWE 60

Query: 61  KLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSF 120
           KLQ+AARVIVAIENPQDIIVQSARPYGQRAVLKFAQ+TGA+AIAGRHTPGTFTNQ+QTSF
Sbjct: 61  KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSF 120

Query: 121 NEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFW 180
           +EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFW
Sbjct: 121 SEPRLLILTDPRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFW 180

Query: 181 LLARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVA 240
           LLARMVLQMRGTI AG KWDVMVDLFFYREPEE K ++E+EA P  ++G        +V 
Sbjct: 181 LLARMVLQMRGTIAAGQKWDVMVDLFFYREPEETKPEDEDEAGPQAEYGALPAPEYGMVG 240

Query: 241 SEQW-SAQIPDAQWGAADVVPAAAPPASSVEWTQETVALAADGWDAAAPPAPAPA 294
            +QW +AQIPDA W      P +A PA++  W+    A A  GW+AAAPP+ APA
Sbjct: 241 GDQWTTAQIPDAAWPGEGQAPISAAPAAA-SWSDSAAAPADGGWEAAAPPSGAPA 294

[Close]
BLAST of Spg006543 vs. ExPASy Swiss-Prot
Match: O65751 (40S ribosomal protein SA OS=Cicer arietinum OX=3827 GN=RAP40 PE=2 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 3.7e-123
Identity = 230/310 (74.19%), Postives = 250/310 (80.65%), Query Frame = 0 

Query: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60
           MAT  AP RQL+QKEADIQMMLAA+VHLGTKNC+FQMERY+FKRRNDGIYIINLGKTW+K
Sbjct: 1   MATTTAPSRQLTQKEADIQMMLAADVHLGTKNCNFQMERYIFKRRNDGIYIINLGKTWDK 60

Query: 61  LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120
           L LAAR+IVAIEN QDIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSF+
Sbjct: 61  LNLAARIIVAIENSQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFS 120

Query: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180
           EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPM YVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMNYVDIGIPANNKGKHSIGCLFWL 180

Query: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVAS 240
           LARMVLQMRGTIR G KWDVMVDLFFYREPEEAK+ EE+E +  PD+ IAD+  + + + 
Sbjct: 181 LARMVLQMRGTIRPGLKWDVMVDLFFYREPEEAKQPEEDE-VAAPDYAIADFNVSAIPSD 240

Query: 241 EQWSAQIPDAQWGAADVVPAAAPPASSVEWTQETVALAADGWDAAAPPAPAPAPAPAPAP 300
            QW A I D  W   D VP   P   +V W     A+A D W  A PP     P   P  
Sbjct: 241 GQWPAAI-DQPWN--DAVPQPIPAVPAVNWAAPE-AVAGD-WGEAVPP-----PQQIPTA 299

Query: 301 AVDGAPAASW 311
            ++  PA  W
Sbjct: 301 GIESVPATGW 299

[Close]
BLAST of Spg006543 vs. ExPASy TrEMBL
Match: A0A6J1F0N2 (40S ribosomal protein SA OS=Cucurbita moschata OX=3662 GN=LOC111438410 PE=3 SV=1)

HSP 1 Score: 555.4 bits (1430), Expect = 1.5e-154
Identity = 285/314 (90.76%), Postives = 289/314 (92.04%), Query Frame = 0 

Query: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60
           MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEK
Sbjct: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEK 60

Query: 61  LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120
           LQLAARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSFN
Sbjct: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFN 120

Query: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180
           EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180

Query: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVAS 240
           LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKE+EEEEALPPPDFGIADYGAAPLVAS
Sbjct: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVAS 240

Query: 241 EQWSAQIPDAQWGAAD-VVPAAA----PPASSVEWTQETVALAADGWDAAAPPAPAPAPA 300
           +QWSAQIPDAQWGAAD VVPAAA    PP SSVEWT E  ALAADGWDAA  P       
Sbjct: 241 DQWSAQIPDAQWGAADVVVPAAAAAAIPPPSSVEWTSEPAALAADGWDAAVAP------- 300

Query: 301 PAPAPAVDGAPAAS 310
           P  APAVDGA   S
Sbjct: 301 PLSAPAVDGAAPPS 307

[Close]
BLAST of Spg006543 vs. ExPASy TrEMBL
Match: A0A6J1I769 (40S ribosomal protein SA OS=Cucurbita maxima OX=3661 GN=LOC111471398 PE=3 SV=1)

HSP 1 Score: 554.7 bits (1428), Expect = 2.5e-154
Identity = 283/314 (90.13%), Postives = 287/314 (91.40%), Query Frame = 0 

Query: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60
           MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEK
Sbjct: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEK 60

Query: 61  LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120
           LQLAARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSFN
Sbjct: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFN 120

Query: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180
           EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180

Query: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVAS 240
           LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKE+EEEEALPPPDFGIADYGAAPLVAS
Sbjct: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVAS 240

Query: 241 EQWSAQIPDAQWGAADVV-----PAAAPPASSVEWTQETVALAADGWDAAAPPAPAPAPA 300
           +QWSAQIPDAQWGAADVV      AA PP SSVEWT E  ALAADGWDAA  P       
Sbjct: 241 DQWSAQIPDAQWGAADVVVPAATAAAIPPPSSVEWTSEPAALAADGWDAAVSP------- 300

Query: 301 PAPAPAVDGAPAAS 310
           P  APAVDGA   S
Sbjct: 301 PLSAPAVDGAAPPS 307

[Close]
BLAST of Spg006543 vs. ExPASy TrEMBL
Match: A0A6J1DWT5 (40S ribosomal protein SA OS=Momordica charantia OX=3673 GN=LOC111025257 PE=3 SV=1)

HSP 1 Score: 547.7 bits (1410), Expect = 3.0e-152
Identity = 281/315 (89.21%), Postives = 287/315 (91.11%), Query Frame = 0 

Query: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60
           MATGAAPPRQLSQKEADIQMMLAAEVHLGTKN DFQMERY+FKRRNDGIYIINLGKTWEK
Sbjct: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNSDFQMERYIFKRRNDGIYIINLGKTWEK 60

Query: 61  LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120
           LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSFN
Sbjct: 61  LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFN 120

Query: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180
           EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180

Query: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVAS 240
           LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEA  PPD+GIAD+GAAPLVAS
Sbjct: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEAAAPPDYGIADFGAAPLVAS 240

Query: 241 EQWSAQIPDAQWGAAD-VVPAAAPPASSVEWTQETVAL-AADGWDAAAPPAPAPAPAPAP 300
           +QW+ QIPDAQWGA D VVPAAA P SSVEW QE  A  AADGWDA           P P
Sbjct: 241 DQWAGQIPDAQWGAPDVVVPAAAAPVSSVEWAQEPAASGAADGWDAPV--------VPPP 300

Query: 301 APAVDGA--PAASWF 312
           APAVD A  PAASWF
Sbjct: 301 APAVDSAAPPAASWF 307

[Close]
BLAST of Spg006543 vs. ExPASy TrEMBL
Match: A0A5D3DUK0 (40S ribosomal protein SA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold322G00510 PE=3 SV=1)

HSP 1 Score: 547.7 bits (1410), Expect = 3.0e-152
Identity = 280/313 (89.46%), Postives = 285/313 (91.05%), Query Frame = 0 

Query: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60
           MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK
Sbjct: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60

Query: 61  LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120
           LQLAARVIV IENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN
Sbjct: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120

Query: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180
           EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180

Query: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVAS 240
           LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKE EEEEALPP DFGIADY AAPL AS
Sbjct: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPL-AS 240

Query: 241 EQWSAQIPDAQWGAADVV--PAAAPPASSVEWTQETVALAADGWDAAAPPAPAPAPAPAP 300
           +QW++QIPDAQWGAAD +  PAA  PAS  EW  E VAL ADGWDAAAPP P  A A   
Sbjct: 241 DQWTSQIPDAQWGAADALPPPAAVVPASGAEWAPEPVALTADGWDAAAPPPPPAASADGT 300

Query: 301 APAVDGAPAASWF 312
           APA     +ASWF
Sbjct: 301 APA-----SASWF 307

[Close]
BLAST of Spg006543 vs. ExPASy TrEMBL
Match: A0A1S3CJX7 (40S ribosomal protein SA OS=Cucumis melo OX=3656 GN=LOC103501303 PE=3 SV=1)

HSP 1 Score: 547.7 bits (1410), Expect = 3.0e-152
Identity = 280/313 (89.46%), Postives = 285/313 (91.05%), Query Frame = 0 

Query: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60
           MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK
Sbjct: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60

Query: 61  LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120
           LQLAARVIV IENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN
Sbjct: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120

Query: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180
           EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180

Query: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVAS 240
           LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKE EEEEALPP DFGIADY AAPL AS
Sbjct: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPL-AS 240

Query: 241 EQWSAQIPDAQWGAADVV--PAAAPPASSVEWTQETVALAADGWDAAAPPAPAPAPAPAP 300
           +QW++QIPDAQWGAAD +  PAA  PAS  EW  E VAL ADGWDAAAPP P  A A   
Sbjct: 241 DQWTSQIPDAQWGAADALPPPAAVVPASGAEWAPEPVALTADGWDAAAPPPPPAASADGT 300

Query: 301 APAVDGAPAASWF 312
           APA     +ASWF
Sbjct: 301 APA-----SASWF 307

[Close]
BLAST of Spg006543 vs. TAIR 10
Match: AT1G72370.1 (40s ribosomal protein SA )

HSP 1 Score: 445.3 bits (1144), Expect = 4.1e-125
Identity = 225/295 (76.27%), Postives = 250/295 (84.75%), Query Frame = 0 

Query: 1   MAT-GAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWE 60
           MAT G+A   QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWE
Sbjct: 1   MATNGSASSAQLSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWE 60

Query: 61  KLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSF 120
           KLQ+AARVIVAIENPQDIIVQSARPYGQRAVLKFAQ+TGA+AIAGRHTPGTFTNQ+QTSF
Sbjct: 61  KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSF 120

Query: 121 NEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFW 180
           +EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFW
Sbjct: 121 SEPRLLILTDPRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFW 180

Query: 181 LLARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVA 240
           LLARMVLQMRGTI AG KWDVMVDLFFYREPEE K ++E+EA P  ++G        +V 
Sbjct: 181 LLARMVLQMRGTIAAGQKWDVMVDLFFYREPEETKPEDEDEAGPQAEYGALPAPEYGMVG 240

Query: 241 SEQW-SAQIPDAQWGAADVVPAAAPPASSVEWTQETVALAADGWDAAAPPAPAPA 294
            +QW +AQIPDA W      P +A PA++  W+    A A  GW+AAAPP+ APA
Sbjct: 241 GDQWTTAQIPDAAWPGEGQAPISAAPAAA-SWSDSAAAPADGGWEAAAPPSGAPA 294

[Close]
BLAST of Spg006543 vs. TAIR 10
Match: AT1G72370.2 (40s ribosomal protein SA )

HSP 1 Score: 439.5 bits (1129), Expect = 2.2e-123
Identity = 224/295 (75.93%), Postives = 249/295 (84.41%), Query Frame = 0 

Query: 1   MAT-GAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWE 60
           MAT G+A   QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWE
Sbjct: 1   MATNGSASSAQLSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWE 60

Query: 61  KLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSF 120
           KLQ+AARVIVAIENPQDIIVQSARPYGQRAVLKFAQ+TGA+AIAGRHTPGTFTNQ+QTSF
Sbjct: 61  KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSF 120

Query: 121 NEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFW 180
           +EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFW
Sbjct: 121 SEPRLLILTDPRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFW 180

Query: 181 LLARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVA 240
           LLARMVLQMRGTI AG KWDVMVDLFFYREPEE K ++E+EA P  ++G        +V 
Sbjct: 181 LLARMVLQMRGTIAAGQKWDVMVDLFFYREPEETKPEDEDEAGPQAEYGALPAPEYGMVG 240

Query: 241 SEQW-SAQIPDAQWGAADVVPAAAPPASSVEWTQETVALAADGWDAAAPPAPAPA 294
            +QW +AQIPDA W      P +A PA++  W+      A  GW+AAAPP+ APA
Sbjct: 241 GDQWTTAQIPDAAWPGEGQAPISAAPAAA-SWSDS----ADGGWEAAAPPSGAPA 290

[Close]
BLAST of Spg006543 vs. TAIR 10
Match: AT3G04770.2 (40s ribosomal protein SA B )

HSP 1 Score: 415.6 bits (1067), Expect = 3.5e-116
Identity = 212/286 (74.13%), Postives = 237/286 (82.87%), Query Frame = 0 

Query: 5   AAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLA 64
           A   RQ+S+KEADIQMML+A+VHLGTKNC++QMERYVFKRR+DGIYIINLGKTW+KLQ+A
Sbjct: 7   ATAGRQVSEKEADIQMMLSADVHLGTKNCNYQMERYVFKRRDDGIYIINLGKTWDKLQMA 66

Query: 65  ARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEPRL 124
           ARVIVAIENP+DIIVQSARPYGQRAVLKFAQ+TG +AIAGRHTPGTFTNQ+QTSF+EPRL
Sbjct: 67  ARVIVAIENPKDIIVQSARPYGQRAVLKFAQYTGVNAIAGRHTPGTFTNQMQTSFSEPRL 126

Query: 125 LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM 184
           LILTDPRTDHQPIKE ALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARM
Sbjct: 127 LILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMGFVDIGIPANNKGKHSIGCLFWLLARM 186

Query: 185 VLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVASEQW- 244
           VLQMRGTI A  KWDVMVDLFFYREPEEAK++ +EEA    D+G        +V  +QW 
Sbjct: 187 VLQMRGTILAAQKWDVMVDLFFYREPEEAKQEGDEEAEVQADYG--------MVGGDQWT 246

Query: 245 SAQIPDAQWGAADVVPAAAPPASSVEWTQETVALAADGWDAAAPPA 290
           +AQI DA W      P +A PA  V          A GW+AA+ PA
Sbjct: 247 TAQISDAAWSGEVEQPISAAPAVGV--------TVAAGWEAASVPA 276

[Close]
BLAST of Spg006543 vs. TAIR 10
Match: AT3G04770.1 (40s ribosomal protein SA B )

HSP 1 Score: 365.9 bits (938), Expect = 3.2e-101
Identity = 174/199 (87.44%), Postives = 190/199 (95.48%), Query Frame = 0 

Query: 5   AAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLA 64
           A   RQ+S+KEADIQMML+A+VHLGTKNC++QMERYVFKRR+DGIYIINLGKTW+KLQ+A
Sbjct: 7   ATAGRQVSEKEADIQMMLSADVHLGTKNCNYQMERYVFKRRDDGIYIINLGKTWDKLQMA 66

Query: 65  ARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEPRL 124
           ARVIVAIENP+DIIVQSARPYGQRAVLKFAQ+TG +AIAGRHTPGTFTNQ+QTSF+EPRL
Sbjct: 67  ARVIVAIENPKDIIVQSARPYGQRAVLKFAQYTGVNAIAGRHTPGTFTNQMQTSFSEPRL 126

Query: 125 LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM 184
           LILTDPRTDHQPIKE ALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARM
Sbjct: 127 LILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMGFVDIGIPANNKGKHSIGCLFWLLARM 186

Query: 185 VLQMRGTIRAGHKWDVMVD 204
           VLQMRGTI A  KWDVMV+
Sbjct: 187 VLQMRGTILAAQKWDVMVN 205

The following BLAST results are available for this feature:
BLAST of Spg006543 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038886558.15.0e-15791.3540S ribosomal protein SA-like [Benincasa hispida][more]
XP_022932088.13.0e-15490.7640S ribosomal protein SA-like [Cucurbita moschata] >KAG7037204.1 40S ribosomal p... [more]
KAG6607580.13.9e-15490.4840S ribosomal protein SA, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022972886.15.1e-15490.1340S ribosomal protein SA-like [Cucurbita maxima][more]
XP_023525392.18.8e-15489.6240S ribosomal protein SA-like [Cucurbita pepo subsp. pepo][more]
BLAST of Spg006543 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O225185.0e-12877.9240S ribosomal protein SA OS=Glycine max OX=3847 PE=2 SV=1[more]
O803774.3e-12780.1340S ribosomal protein SA OS=Daucus carota OX=4039 GN=179B PE=2 SV=1[more]
A5BUU49.5e-12776.1940S ribosomal protein SA OS=Vitis vinifera OX=29760 GN=GSVIVT00034021001 PE=3 SV... [more]
Q086825.8e-12476.2740S ribosomal protein Sa-1 OS=Arabidopsis thaliana OX=3702 GN=RPSaA PE=1 SV=3[more]
O657513.7e-12374.1940S ribosomal protein SA OS=Cicer arietinum OX=3827 GN=RAP40 PE=2 SV=1[more]
BLAST of Spg006543 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1F0N21.5e-15490.7640S ribosomal protein SA OS=Cucurbita moschata OX=3662 GN=LOC111438410 PE=3 SV=1[more]
A0A6J1I7692.5e-15490.1340S ribosomal protein SA OS=Cucurbita maxima OX=3661 GN=LOC111471398 PE=3 SV=1[more]
A0A6J1DWT53.0e-15289.2140S ribosomal protein SA OS=Momordica charantia OX=3673 GN=LOC111025257 PE=3 SV=... [more]
A0A5D3DUK03.0e-15289.4640S ribosomal protein SA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A1S3CJX73.0e-15289.4640S ribosomal protein SA OS=Cucumis melo OX=3656 GN=LOC103501303 PE=3 SV=1[more]
BLAST of Spg006543 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G72370.14.1e-12576.2740s ribosomal protein SA [more]
AT1G72370.22.2e-12375.9340s ribosomal protein SA [more]
AT3G04770.23.5e-11674.1340s ribosomal protein SA B [more]
AT3G04770.13.2e-10187.4440s ribosomal protein SA B [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001865Ribosomal protein S2PRINTSPR00395RIBOSOMALS2coord: 18..36
score: 36.11
coord: 97..114
score: 47.01
coord: 160..174
score: 53.64
coord: 48..57
score: 64.92
coord: 122..139
score: 44.62
coord: 139..150
score: 51.15
IPR001865Ribosomal protein S2PFAMPF00318Ribosomal_S2coord: 21..114
e-value: 2.6E-13
score: 49.7
coord: 120..185
e-value: 5.1E-12
score: 45.5
IPR001865Ribosomal protein S2CDDcd01425RPS2coord: 21..187
e-value: 1.68652E-73
score: 222.842
NoneNo IPR availableGENE3D3.40.50.10490coord: 17..222
e-value: 3.1E-105
score: 352.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 283..311
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 287..301
NoneNo IPR availablePANTHERPTHR11489:SF2540S RIBOSOMAL PROTEIN SAcoord: 10..293
IPR005707Ribosomal protein S2, eukaryotic/archaealTIGRFAMTIGR01012TIGR01012coord: 13..209
e-value: 1.3E-96
score: 319.7
IPR005707Ribosomal protein S2, eukaryotic/archaealPANTHERPTHR1148940S RIBOSOMAL PROTEIN SAcoord: 10..293
IPR018130Ribosomal protein S2, conserved sitePROSITEPS00962RIBOSOMAL_S2_1coord: 18..29
IPR018130Ribosomal protein S2, conserved sitePROSITEPS00963RIBOSOMAL_S2_2coord: 122..146
IPR027498Ribosomal protein S2, eukaryoticHAMAPMF_03015Ribosomal_S2_eukcoord: 5..273
score: 50.822998
IPR023591Ribosomal protein S2, flavodoxin-like domain superfamilySUPERFAMILY52313Ribosomal protein S2coord: 13..203

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg006543.1Spg006543.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0002181 cytoplasmic translation
biological_process GO:0000028 ribosomal small subunit assembly
biological_process GO:0006412 translation
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0005840 ribosome
cellular_component GO:0015935 small ribosomal subunit
molecular_function GO:0003735 structural constituent of ribosome