Spg006542 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg006542
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold9: 18750065 .. 18752035 (+)
RNA-Seq Expression	Spg006542
Synteny	Spg006542

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAACTCGCCCAAATCTTCATCAACAAGCAAGATCACTCGATCTCAGAGTGCTCAAACCGCCCACGAAGCTGAAGTAGGTGTTCGACGGCCAGAAGAGAACCCCGAAACACCCATGCATAGCACGAGAAGGACGAGACCTTCGAGTTTCTCACCGGCGATCGTGAACCAAGAAACCGCCGCTCAAACTCCTTCTTCCTCAACAATGTCGGCCACATCGAGGGAGAATCCAAGTTCGTCTCAACTTAGGAGGTCCACGCGCACCAATGCCGTCCATAAAACCCAAAAAACCGCAACTCAACAATTCAGAAAACGCTTGCTGGAGTGGTTTTCAATGATCCGGGTGATGGGAGCTCAGAAAAGGGAAACTCTTGAAGAAGAAGCAAATCGGCAAGATGAAGAAGCCGCAAAGGCAGCAGAAAGCTCTCGGCAAAGAGAGGCTTCAACGGGTAAAACTTCTGAACCTTCAACTAACCCCTCTTCGTCTTGCAGGAACAAACCATTCGTTACCTACAGTGCAGGGAGGAGGAGTCCCAAGAGAGTTGCACCCGAAAAGCCGCTTGTCATCGAGCCTCTCAAAACTACGAGAATGCCCCCGGATGTATTCGAAGACATAATCTGCCAAGCTGTGGCAAAGGCTCTCGTGATTGACAAAGGCTACAAGGCTGAACAAGAAGCCTTGAGGGAAATTGAGGCCGAGAAAGAGTTGGAAAATCAGCACATGAGGGAAAATGATGAGTTTTTAAGAGAAAGAGATCTTGAAGAAGAGAGAAAAAAGGAAGAGGAAAGGCAAGAGGCCGAGAGGGCCAAGATAGCTGAAGAAGAGGAAAGAAAATTAGATGAAGAACTCAGGAGGGCAGCTGCTGACTTGCAACTCCTTGAGGAAGAAAAACAAAGAAGGGAAGAGTTAAAAGAAGATGAAAAAAGAAGAAAGGAAGCTGAAGACTTCCTTGCAGCTTTTGAGCCACTCCACAAGTCTCAAAGTGAGGCTGAGATGCTGCAAGGAAGAAAAGAAGAGGCCCATCAGGAGCCAAATGAAGGAAATTCAGGAAAAGAAAAAGAAATAGAAGAAGTGGATGAAGGCCAGAATGCGACCGCATCTGGGCCGCATTCCGAGGAAGGCCAAGAAATGACCACTGAAGCTCAGCCAGCTGATGAGGTTCTCGAACCTCTATTCAAAGATGACCCACCAGCAGCTGACAACACCTCTTCGGGAGAGAAGAGGGATGAAGAAGAGAAAGAAAGCAAGGAGACCGAGACCTCCAATGACTCAGAGACAGAATCCGATTCAGAGATCAAGGAATTGGATGACGACCAAGTTCCTATCTCTGCGACATTGAGGGGAAAGAGAAGAAGAGAGATCAAAGCTGAAAGGAGGACTAAGAACAAGAATGACTCGATATTTTCCAAGAGGCCAAGGATAAGGTCCATGGACGCCTCTCCTGCAGCTCCTCCTACCGTCTCACCCGCCAAGCCAAAGGCCAAATCACCCAAGGATGCATCTCCTAAAAATCCATTCCCCGAGGTATTCAGAGATGTAATTTTTCAGGAACGGATGGAGATTATGAGAAAAAGAGATTTCCTCAATGAGAAGGGATTCTCTAACAGAGCAGGAGCACTGCCAGAGTTCGTAAGCAGAGTTATCTTCCAGTACAAGTGGCAGGAGTTCTGTGCTCACCCTCAGGTGCCTTTAGTTCGAGAGTTTTACACCGGCCTGAGGGAGGAGAGCATCAGTATGGCGGTGGTGAGAGGCAAAATGATCAACTTTTCTTCAGTGGACATTAACAGGGTGTACAGAATCAAGGAACCCTTGCATCCAAGAGGGAACGATTTTATCAGGAACCCCTCGGCCAAGCAGATGAAAGAAGCACTTAAACTGGTGGCCAACAAGGGAGTTCAGTGGAAAGAGTCCCAAACGAAGGTGAAGACTCTAGTGCCAAGCGACCTAAAACCAGAATCAGCAGTTTGA

mRNA sequence

ATGAAGAACTCGCCCAAATCTTCATCAACAAGCAAGATCACTCGATCTCAGAGTGCTCAAACCGCCCACGAAGCTGAAGTAGGTGTTCGACGGCCAGAAGAGAACCCCGAAACACCCATGCATAGCACGAGAAGGACGAGACCTTCGAGTTTCTCACCGGCGATCGTGAACCAAGAAACCGCCGCTCAAACTCCTTCTTCCTCAACAATGTCGGCCACATCGAGGGAGAATCCAAGTTCGTCTCAACTTAGGAGGTCCACGCGCACCAATGCCGTCCATAAAACCCAAAAAACCGCAACTCAACAATTCAGAAAACGCTTGCTGGAGTGGTTTTCAATGATCCGGGTGATGGGAGCTCAGAAAAGGGAAACTCTTGAAGAAGAAGCAAATCGGCAAGATGAAGAAGCCGCAAAGGCAGCAGAAAGCTCTCGGCAAAGAGAGGCTTCAACGGGTAAAACTTCTGAACCTTCAACTAACCCCTCTTCGTCTTGCAGGAACAAACCATTCGTTACCTACAGTGCAGGGAGGAGGAGTCCCAAGAGAGTTGCACCCGAAAAGCCGCTTGTCATCGAGCCTCTCAAAACTACGAGAATGCCCCCGGATGTATTCGAAGACATAATCTGCCAAGCTGTGGCAAAGGCTCTCGTGATTGACAAAGGCTACAAGGCTGAACAAGAAGCCTTGAGGGAAATTGAGGCCGAGAAAGAGTTGGAAAATCAGCACATGAGGGAAAATGATGAGTTTTTAAGAGAAAGAGATCTTGAAGAAGAGAGAAAAAAGGAAGAGGAAAGGCAAGAGGCCGAGAGGGCCAAGATAGCTGAAGAAGAGGAAAGAAAATTAGATGAAGAACTCAGGAGGGCAGCTGCTGACTTGCAACTCCTTGAGGAAGAAAAACAAAGAAGGGAAGAGTTAAAAGAAGATGAAAAAAGAAGAAAGGAAGCTGAAGACTTCCTTGCAGCTTTTGAGCCACTCCACAAGTCTCAAAGTGAGGCTGAGATGCTGCAAGGAAGAAAAGAAGAGGCCCATCAGGAGCCAAATGAAGGAAATTCAGGAAAAGAAAAAGAAATAGAAGAAGTGGATGAAGGCCAGAATGCGACCGCATCTGGGCCGCATTCCGAGGAAGGCCAAGAAATGACCACTGAAGCTCAGCCAGCTGATGAGGTTCTCGAACCTCTATTCAAAGATGACCCACCAGCAGCTGACAACACCTCTTCGGGAGAGAAGAGGGATGAAGAAGAGAAAGAAAGCAAGGAGACCGAGACCTCCAATGACTCAGAGACAGAATCCGATTCAGAGATCAAGGAATTGGATGACGACCAAGTTCCTATCTCTGCGACATTGAGGGGAAAGAGAAGAAGAGAGATCAAAGCTGAAAGGAGGACTAAGAACAAGAATGACTCGATATTTTCCAAGAGGCCAAGGATAAGGTCCATGGACGCCTCTCCTGCAGCTCCTCCTACCGTCTCACCCGCCAAGCCAAAGGCCAAATCACCCAAGGATGCATCTCCTAAAAATCCATTCCCCGAGGTATTCAGAGATGTAATTTTTCAGGAACGGATGGAGATTATGAGAAAAAGAGATTTCCTCAATGAGAAGGGATTCTCTAACAGAGCAGGAGCACTGCCAGAGTTCGTAAGCAGAGTTATCTTCCAGTACAAGTGGCAGGAGTTCTGTGCTCACCCTCAGGTGCCTTTAGTTCGAGAGTTTTACACCGGCCTGAGGGAGGAGAGCATCAGTATGGCGGTGGTGAGAGGCAAAATGATCAACTTTTCTTCAGTGGACATTAACAGGGTGTACAGAATCAAGGAACCCTTGCATCCAAGAGGGAACGATTTTATCAGGAACCCCTCGGCCAAGCAGATGAAAGAAGCACTTAAACTGGTGGCCAACAAGGGAGTTCAGTGGAAAGAGTCCCAAACGAAGGTGAAGACTCTAGTGCCAAGCGACCTAAAACCAGAATCAGCAGTTTGA

Coding sequence (CDS)

ATGAAGAACTCGCCCAAATCTTCATCAACAAGCAAGATCACTCGATCTCAGAGTGCTCAAACCGCCCACGAAGCTGAAGTAGGTGTTCGACGGCCAGAAGAGAACCCCGAAACACCCATGCATAGCACGAGAAGGACGAGACCTTCGAGTTTCTCACCGGCGATCGTGAACCAAGAAACCGCCGCTCAAACTCCTTCTTCCTCAACAATGTCGGCCACATCGAGGGAGAATCCAAGTTCGTCTCAACTTAGGAGGTCCACGCGCACCAATGCCGTCCATAAAACCCAAAAAACCGCAACTCAACAATTCAGAAAACGCTTGCTGGAGTGGTTTTCAATGATCCGGGTGATGGGAGCTCAGAAAAGGGAAACTCTTGAAGAAGAAGCAAATCGGCAAGATGAAGAAGCCGCAAAGGCAGCAGAAAGCTCTCGGCAAAGAGAGGCTTCAACGGGTAAAACTTCTGAACCTTCAACTAACCCCTCTTCGTCTTGCAGGAACAAACCATTCGTTACCTACAGTGCAGGGAGGAGGAGTCCCAAGAGAGTTGCACCCGAAAAGCCGCTTGTCATCGAGCCTCTCAAAACTACGAGAATGCCCCCGGATGTATTCGAAGACATAATCTGCCAAGCTGTGGCAAAGGCTCTCGTGATTGACAAAGGCTACAAGGCTGAACAAGAAGCCTTGAGGGAAATTGAGGCCGAGAAAGAGTTGGAAAATCAGCACATGAGGGAAAATGATGAGTTTTTAAGAGAAAGAGATCTTGAAGAAGAGAGAAAAAAGGAAGAGGAAAGGCAAGAGGCCGAGAGGGCCAAGATAGCTGAAGAAGAGGAAAGAAAATTAGATGAAGAACTCAGGAGGGCAGCTGCTGACTTGCAACTCCTTGAGGAAGAAAAACAAAGAAGGGAAGAGTTAAAAGAAGATGAAAAAAGAAGAAAGGAAGCTGAAGACTTCCTTGCAGCTTTTGAGCCACTCCACAAGTCTCAAAGTGAGGCTGAGATGCTGCAAGGAAGAAAAGAAGAGGCCCATCAGGAGCCAAATGAAGGAAATTCAGGAAAAGAAAAAGAAATAGAAGAAGTGGATGAAGGCCAGAATGCGACCGCATCTGGGCCGCATTCCGAGGAAGGCCAAGAAATGACCACTGAAGCTCAGCCAGCTGATGAGGTTCTCGAACCTCTATTCAAAGATGACCCACCAGCAGCTGACAACACCTCTTCGGGAGAGAAGAGGGATGAAGAAGAGAAAGAAAGCAAGGAGACCGAGACCTCCAATGACTCAGAGACAGAATCCGATTCAGAGATCAAGGAATTGGATGACGACCAAGTTCCTATCTCTGCGACATTGAGGGGAAAGAGAAGAAGAGAGATCAAAGCTGAAAGGAGGACTAAGAACAAGAATGACTCGATATTTTCCAAGAGGCCAAGGATAAGGTCCATGGACGCCTCTCCTGCAGCTCCTCCTACCGTCTCACCCGCCAAGCCAAAGGCCAAATCACCCAAGGATGCATCTCCTAAAAATCCATTCCCCGAGGTATTCAGAGATGTAATTTTTCAGGAACGGATGGAGATTATGAGAAAAAGAGATTTCCTCAATGAGAAGGGATTCTCTAACAGAGCAGGAGCACTGCCAGAGTTCGTAAGCAGAGTTATCTTCCAGTACAAGTGGCAGGAGTTCTGTGCTCACCCTCAGGTGCCTTTAGTTCGAGAGTTTTACACCGGCCTGAGGGAGGAGAGCATCAGTATGGCGGTGGTGAGAGGCAAAATGATCAACTTTTCTTCAGTGGACATTAACAGGGTGTACAGAATCAAGGAACCCTTGCATCCAAGAGGGAACGATTTTATCAGGAACCCCTCGGCCAAGCAGATGAAAGAAGCACTTAAACTGGTGGCCAACAAGGGAGTTCAGTGGAAAGAGTCCCAAACGAAGGTGAAGACTCTAGTGCCAAGCGACCTAAAACCAGAATCAGCAGTTTGA

Protein sequence

MKNSPKSSSTSKITRSQSAQTAHEAEVGVRRPEENPETPMHSTRRTRPSSFSPAIVNQETAAQTPSSSTMSATSRENPSSSQLRRSTRTNAVHKTQKTATQQFRKRLLEWFSMIRVMGAQKRETLEEEANRQDEEAAKAAESSRQREASTGKTSEPSTNPSSSCRNKPFVTYSAGRRSPKRVAPEKPLVIEPLKTTRMPPDVFEDIICQAVAKALVIDKGYKAEQEALREIEAEKELENQHMRENDEFLRERDLEEERKKEEERQEAERAKIAEEEERKLDEELRRAAADLQLLEEEKQRREELKEDEKRRKEAEDFLAAFEPLHKSQSEAEMLQGRKEEAHQEPNEGNSGKEKEIEEVDEGQNATASGPHSEEGQEMTTEAQPADEVLEPLFKDDPPAADNTSSGEKRDEEEKESKETETSNDSETESDSEIKELDDDQVPISATLRGKRRREIKAERRTKNKNDSIFSKRPRIRSMDASPAAPPTVSPAKPKAKSPKDASPKNPFPEVFRDVIFQERMEIMRKRDFLNEKGFSNRAGALPEFVSRVIFQYKWQEFCAHPQVPLVREFYTGLREESISMAVVRGKMINFSSVDINRVYRIKEPLHPRGNDFIRNPSAKQMKEALKLVANKGVQWKESQTKVKTLVPSDLKPESAV

Homology

The following BLAST results are available for this feature:

BLAST of Spg006542 vs.


Match Name	E-value	Identity	Description

BLAST of Spg006542 vs.


Match Name	E-value	Identity	Description

BLAST of Spg006542 vs.


Match Name	E-value	Identity	Description

BLAST of Spg006542 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 221..241
None	No IPR available	COILS	Coil	Coil	coord: 122..142
None	No IPR available	COILS	Coil	Coil	coord: 245..315
None	No IPR available	COILS	Coil	Coil	coord: 324..344
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 436..452
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..100
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..169
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 125..185
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 331..361
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..100
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 365..379
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 459..473
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 237..320
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 401..429
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 237..507
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 125..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg006542.1	Spg006542.1	mRNA