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Spg006383 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGGCCGCTTGATCCGGAACCTACTCTCCCCACGAAGCCATGGGTATAAGGTATATATATATCACATACTGAACATGGGCTTTTGTAGTTCATAATTGTAAATTAAAAAAATAATTAGGAAAAACGAACAGATTTTAAAAAAAAAAAAAAAAATAGAAAAACGGGTGGATTTTTTGTCTGCATTACGTTTTTCCTATTATTATTATTATTATTATTTTTTAAATCTGTTTGTTTTTCCTATTTATTTTTTTTGGTTAAAAATCACTTTTGGTCCCTGAACTTTTATGAAAGTAACAATTTGGTCCTTGAACTTTGATTTGTAACGATTTAGTCCATATACTTTCAATTTTTTAACAATTTAGTCCCTGAACTTTAATAAGTAACAATTTAGTCCATGTACTTTCAAATTTGTAGCAATGTAATCATTTTCGCTAAAAAATTCATTAAAATTATATGTCGATTTTTATTATTTAATGATTAAACCTTGTAGCTTATAAACATATTGGGTCCCGAGTTAGTTTATTAATCTATCTATGTAAGAAATTCCATTAAATCTTTACATTAATTTTCACGATATTGACTAAATCGTTATAAATTTGGAAGTACAGGGACTAAATTGTTACTTATTGAAATTCAGAGACTAAATTGTTACAAAATTGAAAGTATAAGGACTAAATCGTTACAAAATTGAAAGTATAGGGACTAAATTGTTACAAATCAAAGTTCAGGGACTAAATTGTTAGTTTCATGAAAGTTTAGAGACCAAAAATGATTTTTAACCTTTTTTTTTTTTTTTTAATTTACAATTATGAACTAATCATTTATTTTTTAATTATATTTTATTTTAAGTTGCGGCGTGTAATGAAAAATGAAGTATTCCATTGTCCATTGTAAAAGTATTATTTCCTTTTTGTTTTGGATTTTGATTTAGGGATCTCGAGAAAGCTTGACAGAATATCGTGTCGATTGGAGGAAAGAGGGAGCGGTCACTCACGTAAAACACCAAGGCGACACTGGTATGCCTCTCTCTATGGATTAAATTTGTGTTATTTAAAATTAAATACTAGTCTAATATTTAATTTAAGTTGATAATAATACCAAATAAAAGGAAGAAAACAATATCATTGATAGTAAAAAAAAAGTAAGATTGTCCATGCAAATTCCTTCAAATGTATATATATCTGATCTGCACTTTATATTATTTGAATTTCACACCAACTCTATAGACCATGAAAGTTTTAGAAAAAAAGATTTTTAAAAACTAACCAAACCATGTTATTTGGTTAATAAGAAGAGAAAGCTAAATTGTTGTAGAAAAAAGTAGAAGATTTTTAAATTTAAAAGCTAAATTATTTATATTTTTAAAAGAAAAAAAAAAGAGGAGAATGTTATTTTATTTTTTTTAAAAAAAGGAAAAAGAACCCAAAAAAAAAAAAAAAAAGATAATAAGCAGAGAAAGAGAAAAGGAAAAAGAACTACCAAAATTGTGTTCATTGTCGATCGAACCAACACATCCTTGAATGATGAGATACCAGCCAACCATGCTGATTAGTTTATAGTTTTAAGATTAAGAGTGGTGCGTTGCTTGCCTCTGGAATTGGAGATTATGCGTTCCATTCCCATTGGTAACGCTTGTTTTTTCTTTAAACTTTTAAATTTGAACTAATATGCAGGGACATGTTGGGCATATGCAGCAGTAGCTGCTATAGAGGGGGCCCACAAAATCGCAACTGGAGAACTTCGTTGCCTATCTGTGCAACAAGTTATCGATCACTTCTCATATCGGGATCGGGATGAAGATGTAGACCCTAACAAACGAGGTTGGGGTAAGGTACAAGAGGTATTTCAATACGTAATGGAGAGAGGACTTCATAATGAAGTCGACTACGACCAAAAAAAATTCCAAAAAAATGAGGTAAATATGTCTCCCAACCCACACACACACAAAAAAAAACCCTAACCAAGCCATGTTTTTATTTTTTTAAAAAAAAACCAAGCCATGTTATTTGCAGGTAGTTCGCATAAGAGATTACAAATTTATTCCATACCATGATGAAGAGAGTTTTATAAAAACTCTCCACAAACAACCTGTTTGTGTAGACATTGCCTGTAACTCTTATAATTTCCACAACTACAAAAAGGTAGTGATTAAATTTAAAATAGATAATTTTTTTTACTGATTTTTATTTTATTGATTTAACCGTAACTAATTAACCTTTCAACTTTACAGGGTGTGTTTAAAGGTCCATACGGAAAAAAGTTAAATCATTCTATGACTGCCGTAGCATATACCCCAAGCCATATCGTCTTAAAAAATTCATGGGGGATCAGTTGGGGGGAGAAAGGATATATGAAGATATCGAGAAACACGAGATACATTGAAGGACCTGGTGGAATCTTTGAATATGCATGCTACCCAATCATATAATAACTCCAACATGTTCATGTCTTAGTCCTCCAAATCAGTAGCTTCTTAAAGGCTCTCCTTGTTTGTATAATTCTTGAAATCCTTTGAAAATGATGTTTGGCAAGGCAGATTGCTTGAACAACATGTAACGATGCGGAACATTACTGGATATTCGATTGGAAACTCCATTGTTATAACTTCATTGAAAAAAAAAAATAAAAAATACTGTTCTTAGTTGAGTTTCAAGACAATATTATAGTTGAAAAGTAGCAAGATAAATTGTGAAAATGCTGTCTTAAAGTGGAATAGATAATGTGAGTTTTGTTTTTCATTTTTTATGGAAGTCACAAATAACTTATGTTGGATTTTTAAAATTTTACACTACAATGACGTTTGACATTTGACTTTTTAATTTAAAGGTAGAAACCATGTAAAATTTATAAATAATGGAATAAATTGATTTTTTTTAAAGTTCAACGCAAACAGATGCCCATAACGATCAAAGTCGAATTGTGAACCGAGTCGAGTTTGAAATCTTTAATCTTGAAATCAAAGATATATATCTTGACCAATGGAACTAGGTTAACCAGACTAAATTGAAAGAAAAATTAATGTATTGTGGCAAAAAAAAAAAAAAAAAAATGCAATTACATTGCTTGGAACTTATTTCATTTTGATTCTTAAAGTTTCAAATATTCTATTTTGATTTGTAATTTTTATATAAATTTTTCTTTTGAAATTTGAATGGTTGAGCATATAATGTTTTGACTCCATTGACTTATGCTTGACATTTTCAAACCTTTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACATCTTTAACTATAAGATATTAATCACAATCAATTACACTCAATAGTTCAATCTCGAAAATAAAGGCAAATATGGGAATAAACAGTTATTTATTTTTTCTTTTTGCAGAATAAAGAAGAAATTTTCTTCCATCGCCAAGGAACGTCATTTCGATACAAATCTGGTCACTCGTCTTCTGAAAGTTGGATGCCTGACTCTGCAAATTCGGGATCTTATAGATAAAGATGAGCGGCCACGACTCCTAAGTATTTCTCTATCTCTACAACCAAAAAGGGTGAAATTCCCGAGCTCAAAGAGGAGCTTAATTCCCAGTACAAGGCATTTCTCTTTCTCTTCGTATTTCTATCGCTATGTCAATTTCTGCTCCATGATCGCTTAGGTTCTTATAAACTCGTAGATCTGTTTCTTTCGCTATGACGTCCTAATTCTAGTGTCCCATTTCCTAGAATCATATCGCTTTCTTGTTGTTTTTATTTTGGCACTCTACGAACCATAACTTCGCAAGTAGTCTAGGTACATATGTGCCCAAAAAACAGGAGTTTAGCATCGCACTTGGTCAAAGTGGTTATGTTGTTTTCATTCTGGCTCCTGCATTTGTGTAGGGAGGACATCCAGAATCTTCGTATTAGTTGGTTGGAGTTTTGTCTCCATGTTAGTTTCTTACTTTTCTGCTGTATTCTTGACTTCATTTGTACTTTTTTGTTTCTTGACAAAAATCATTGTACTCTGATTTTCTTCAGATGGGGTCAAGTCTTTATACTAGATGCACTTTCAAGATACAAAACAATGGATACTCGCGAAGCAGAAAATATAGTGGAGAGAGTTACCCCATGGCTACAGCATGCTAATTGTGCAGTTGTTTTATCTACTGTGAAGGTAAATATTCTATTAAGTAATTGAATTTCTCCACTATATATATGTTGATGATTTTGAGAATGTCCAAGCGTATTTCAACTAACTAATATATTTCATCTTTCTTTTCCTATTTTCCCTCATTAAATAGATGATGATTCTCCTACAAATGGAACTTATCACTAGCACTGATATAGTTCGAAACCTTTGCAAAAAGATGGCTCCTCCTCTTGTTACTTTGCTCTCATCAGAACCTGAGATACAATATGTTGCACTGCGAAATATTAACCTTATAGTACAGAAACGACCTACAATTCTTGCACATGAAATTAAGGTGAGTTGGTGATAAATTTCCCAATATGATGGTAGCGTAGCTTGTAATTTGTAAGAAATAGGAACGTAAATAATCAAGAAACTTTGTACTGCTTGTTTTCTAGAAACTTACTACTTCCCTTTTGTTCTCTTTTTTTGATTTATCACCAATGTTGTAGGTTTTCTTCTGTAAGTATAATGATCCAATCTATGTTAAGATGGAGAAGTTAGAAATCATGATTAAGCTTGCATCTGATCGGAACATAGACCAG ATGGCAGGCCGCTTGATCCGGAACCTACTCTCCCCACGAAGCCATGGGTATAAGGGATCTCGAGAAAGCTTGACAGAATATCGTGTCGATTGGAGGAAAGAGGGAGCGGTCACTCACGTAAAACACCAAGGCGACACTGGGACATGTTGGGCATATGCAGCAGTAGCTGCTATAGAGGGGGCCCACAAAATCGCAACTGGAGAACTTCGTTGCCTATCTGTGCAACAAGTTATCGATCACTTCTCATATCGGGATCGGGATGAAGATGTAGACCCTAACAAACGAGGTTGGGGTAAGTTGAAAAGTAGCAAGATAAATTGTGAAAATGCTGTCTTAAAAATAAAGAAGAAATTTTCTTCCATCGCCAAGGAACGTCATTTCGATACAAATCTGGTCACTCGTCTTCTGAAAGTTGGATGCCTGACTCTGCAAATTCGGGATCTTATAGATAAAGATGAGCGGCCACGACTCCTAAGGAGGACATCCAGAATCTTCGTATTAGTTGGTTGGAGTTTTGTCTCCATATGGGGTCAAGTCTTTATACTAGATGCACTTTCAAGATACAAAACAATGGATACTCGCGAAGCAGAAAATATAGTGGAGAGAGTTACCCCATGGCTACAGCATGCTAATTGTGCAGTTGTTTTATCTACTGTGAAGATGATGATTCTCCTACAAATGGAACTTATCACTAGCACTGATATAGTTCGAAACCTTTGCAAAAAGATGGCTCCTCCTCTTGTTACTTTGCTCTCATCAGAACCTGAGATACAATATGTTGCACTGCGAAATATTAACCTTATAGTACAGAAACGACCTACAATTCTTGCACATGAAATTAAGGTTTTCTTCTGTAAGTATAATGATCCAATCTATGTTAAGATGGAGAAGTTAGAAATCATGATTAAGCTTGCATCTGATCGGAACATAGACCAG ATGGCAGGCCGCTTGATCCGGAACCTACTCTCCCCACGAAGCCATGGGTATAAGGGATCTCGAGAAAGCTTGACAGAATATCGTGTCGATTGGAGGAAAGAGGGAGCGGTCACTCACGTAAAACACCAAGGCGACACTGGGACATGTTGGGCATATGCAGCAGTAGCTGCTATAGAGGGGGCCCACAAAATCGCAACTGGAGAACTTCGTTGCCTATCTGTGCAACAAGTTATCGATCACTTCTCATATCGGGATCGGGATGAAGATGTAGACCCTAACAAACGAGGTTGGGGTAAGTTGAAAAGTAGCAAGATAAATTGTGAAAATGCTGTCTTAAAAATAAAGAAGAAATTTTCTTCCATCGCCAAGGAACGTCATTTCGATACAAATCTGGTCACTCGTCTTCTGAAAGTTGGATGCCTGACTCTGCAAATTCGGGATCTTATAGATAAAGATGAGCGGCCACGACTCCTAAGGAGGACATCCAGAATCTTCGTATTAGTTGGTTGGAGTTTTGTCTCCATATGGGGTCAAGTCTTTATACTAGATGCACTTTCAAGATACAAAACAATGGATACTCGCGAAGCAGAAAATATAGTGGAGAGAGTTACCCCATGGCTACAGCATGCTAATTGTGCAGTTGTTTTATCTACTGTGAAGATGATGATTCTCCTACAAATGGAACTTATCACTAGCACTGATATAGTTCGAAACCTTTGCAAAAAGATGGCTCCTCCTCTTGTTACTTTGCTCTCATCAGAACCTGAGATACAATATGTTGCACTGCGAAATATTAACCTTATAGTACAGAAACGACCTACAATTCTTGCACATGAAATTAAGGTTTTCTTCTGTAAGTATAATGATCCAATCTATGTTAAGATGGAGAAGTTAGAAATCATGATTAAGCTTGCATCTGATCGGAACATAGACCAG MAGRLIRNLLSPRSHGYKGSRESLTEYRVDWRKEGAVTHVKHQGDTGTCWAYAAVAAIEGAHKIATGELRCLSVQQVIDHFSYRDRDEDVDPNKRGWGKLKSSKINCENAVLKIKKKFSSIAKERHFDTNLVTRLLKVGCLTLQIRDLIDKDERPRLLRRTSRIFVLVGWSFVSIWGQVFILDALSRYKTMDTREAENIVERVTPWLQHANCAVVLSTVKMMILLQMELITSTDIVRNLCKKMAPPLVTLLSSEPEIQYVALRNINLIVQKRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQ Homology
BLAST of Spg006383 vs. NCBI nr
Match: KAA0040220.1 (beta-adaptin-like protein B [Cucumis melo var. makuwa]) HSP 1 Score: 252.3 bits (643), Expect = 5.5e-63 Identity = 153/253 (60.47%), Postives = 174/253 (68.77%), Query Frame = 0
BLAST of Spg006383 vs. NCBI nr
Match: XP_008455466.1 (PREDICTED: beta-adaptin-like protein B [Cucumis melo]) HSP 1 Score: 252.3 bits (643), Expect = 5.5e-63 Identity = 153/253 (60.47%), Postives = 174/253 (68.77%), Query Frame = 0
BLAST of Spg006383 vs. NCBI nr
Match: CAA2618841.1 (unnamed protein product [Spirodela intermedia]) HSP 1 Score: 251.9 bits (642), Expect = 7.2e-63 Identity = 150/251 (59.76%), Postives = 174/251 (69.32%), Query Frame = 0
BLAST of Spg006383 vs. NCBI nr
Match: XP_017433376.1 (PREDICTED: beta-adaptin-like protein C [Vigna angularis] >KAG2398090.1 Beta-adaptin-like protein [Vigna angularis] >KOM51116.1 hypothetical protein LR48_Vigan08g194300 [Vigna angularis] >BAT91157.1 hypothetical protein VIGAN_06246900 [Vigna angularis var. angularis]) HSP 1 Score: 251.5 bits (641), Expect = 9.3e-63 Identity = 150/252 (59.52%), Postives = 175/252 (69.44%), Query Frame = 0
BLAST of Spg006383 vs. NCBI nr
Match: XP_027910453.1 (beta-adaptin-like protein C [Vigna unguiculata]) HSP 1 Score: 251.5 bits (641), Expect = 9.3e-63 Identity = 150/252 (59.52%), Postives = 175/252 (69.44%), Query Frame = 0
BLAST of Spg006383 vs. ExPASy Swiss-Prot
Match: Q9SUS3 (Beta-adaptin-like protein B OS=Arabidopsis thaliana OX=3702 GN=BETAB-AD PE=1 SV=1) HSP 1 Score: 246.5 bits (628), Expect = 3.9e-64 Identity = 146/252 (57.94%), Postives = 173/252 (68.65%), Query Frame = 0
BLAST of Spg006383 vs. ExPASy Swiss-Prot
Match: O81742 (Beta-adaptin-like protein C OS=Arabidopsis thaliana OX=3702 GN=BETAC-AD PE=1 SV=2) HSP 1 Score: 246.1 bits (627), Expect = 5.1e-64 Identity = 147/252 (58.33%), Postives = 172/252 (68.25%), Query Frame = 0
BLAST of Spg006383 vs. ExPASy Swiss-Prot
Match: Q54X82 (AP-1 complex subunit beta OS=Dictyostelium discoideum OX=44689 GN=ap1b1 PE=3 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 1.2e-47 Identity = 117/253 (46.25%), Postives = 158/253 (62.45%), Query Frame = 0
BLAST of Spg006383 vs. ExPASy Swiss-Prot
Match: O35643 (AP-1 complex subunit beta-1 OS=Mus musculus OX=10090 GN=Ap1b1 PE=1 SV=2) HSP 1 Score: 181.8 bits (460), Expect = 1.2e-44 Identity = 113/253 (44.66%), Postives = 151/253 (59.68%), Query Frame = 0
BLAST of Spg006383 vs. ExPASy Swiss-Prot
Match: Q10567 (AP-1 complex subunit beta-1 OS=Homo sapiens OX=9606 GN=AP1B1 PE=1 SV=2) HSP 1 Score: 181.4 bits (459), Expect = 1.6e-44 Identity = 113/253 (44.66%), Postives = 151/253 (59.68%), Query Frame = 0
BLAST of Spg006383 vs. ExPASy TrEMBL
Match: A0A5A7TA79 (Beta-adaptin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold888G00030 PE=3 SV=1) HSP 1 Score: 252.3 bits (643), Expect = 2.7e-63 Identity = 153/253 (60.47%), Postives = 174/253 (68.77%), Query Frame = 0
BLAST of Spg006383 vs. ExPASy TrEMBL
Match: A0A1S3C1P5 (Beta-adaptin-like protein OS=Cucumis melo OX=3656 GN=LOC103495623 PE=3 SV=1) HSP 1 Score: 252.3 bits (643), Expect = 2.7e-63 Identity = 153/253 (60.47%), Postives = 174/253 (68.77%), Query Frame = 0
BLAST of Spg006383 vs. ExPASy TrEMBL
Match: A0A7I8IL17 (Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI7747_04005008 PE=3 SV=1) HSP 1 Score: 251.9 bits (642), Expect = 3.5e-63 Identity = 150/251 (59.76%), Postives = 174/251 (69.32%), Query Frame = 0
BLAST of Spg006383 vs. ExPASy TrEMBL
Match: A0A5A7PBP2 (AP-2 complex subunit beta OS=Striga asiatica OX=4170 GN=STAS_06271 PE=3 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 4.5e-63 Identity = 151/253 (59.68%), Postives = 176/253 (69.57%), Query Frame = 0
BLAST of Spg006383 vs. ExPASy TrEMBL
Match: A0A0L9V7S7 (Beta-adaptin-like protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan08g194300 PE=3 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 4.5e-63 Identity = 150/252 (59.52%), Postives = 175/252 (69.44%), Query Frame = 0
BLAST of Spg006383 vs. TAIR 10
Match: AT4G11380.1 (Adaptin family protein ) HSP 1 Score: 246.5 bits (628), Expect = 2.8e-65 Identity = 146/252 (57.94%), Postives = 173/252 (68.65%), Query Frame = 0
BLAST of Spg006383 vs. TAIR 10
Match: AT4G11380.2 (Adaptin family protein ) HSP 1 Score: 246.5 bits (628), Expect = 2.8e-65 Identity = 146/252 (57.94%), Postives = 173/252 (68.65%), Query Frame = 0
BLAST of Spg006383 vs. TAIR 10
Match: AT4G23460.1 (Adaptin family protein ) HSP 1 Score: 246.1 bits (627), Expect = 3.7e-65 Identity = 147/252 (58.33%), Postives = 172/252 (68.25%), Query Frame = 0
BLAST of Spg006383 vs. TAIR 10
Match: AT5G11490.1 (adaptin family protein ) HSP 1 Score: 91.7 bits (226), Expect = 1.2e-18 Identity = 51/135 (37.78%), Postives = 85/135 (62.96%), Query Frame = 0
BLAST of Spg006383 vs. TAIR 10
Match: AT5G11490.2 (adaptin family protein ) HSP 1 Score: 91.7 bits (226), Expect = 1.2e-18 Identity = 51/135 (37.78%), Postives = 85/135 (62.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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