Spg006377 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg006377
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Ribonuclease H
Location	scaffold4: 3836476 .. 3841931 (-)
RNA-Seq Expression	Spg006377
Synteny	Spg006377

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGCAGGTGGGGTGGTTAGTGGGCAATGGCAACATAGATTGCTATTTCCAATGGGAAACATAAAATGATTGAAAAACCACTTGTCATGTTTTCACTTTAAATTCTATTCCTTCTATAATTCAACCCTTTGACTACCTCCATTTTTATTTCCTAAGATTATGACCCTTCCCATTTTTTTCTTCTCCCCATATTTCTTTATTATTATCTCATCACAATACCCTTGCAAAGAGTTTAGGACATATCTCAATAATCCTTAATCAAATCTTATTCCAATTGAACAAATTTAATTCATGTCAAAGTCCAACATAACTTAAAAGGTTAAATAAGTAATCCAAATTTTTATGCTGATAATTGAATTGTAATACGAAAAAATGTTCATATTCTATTTCTAAAAAGAAGGTCGGGAGGAACTCACACCAACGGTAAATTTGTAGATGAGGGGAAAGACGTGGCCTGCAAAACGATAAATCTGCACACCGGTGTGGTGCTTGCCACACCGCCTCCGATGCTTAAGTTAGAAAACGGAAGGAGGAGAGCAAGAGAGGAGGAGAGCAAGAGAGCAAGAGAAGAGACCAGAGAATCGAGTTCGAGATCCCTTCTTCAGTGGCGAAGAGAGGTTTAAATACTTGCTTATGCTCCTAGGGTTTTTAGGAATTCGGAGGCGTTTCGGGCTGAACCAGACGGAACCGGGGCGTCCAGGGGCACCAAGGACCAAGCGAAGGCGGAAGAGCGGGCCGAGTGGTCGGCCTCGGCCCACATGGCCAAGGCCGAGCAGGGGTTGGGCCAAGGCCCGACCCTCTGGCCCGTTTCTCCTCCAAAGTCCATCTTTTGGTCCTGTTTTCGAGCTCGTGCTGTGTTGTCCTCGCCAATTCCTTACGCTTCGGAGTGATCCAAAATCACCTATAACAATTTTAATAATGTTATTCTCAATACATTTGAGAGAGAGAAGAATAACCACATCAACATGATAAAAATTATAAAAATATATATTATACCATATGAGCATAAACTTAATTAAAACAATATATTAATTATTATAGTTAAAAACTTAGCCATAAAAATGAAACAAAACTAAACATACTTTGATAAAAAAATCGACGTGTTCGATACATCATTGACATTACGTCTTTTGAACTACCTTCAGATTTAAAATGTCAATCTTACATGGGTGAAAACTAAACATTAAACATACCATAATAAAACATGAGTTGTTTTTGAATAATAATAATGTTTATTATTAACTTGTGAATGTAGCACAATGTTTCAATTATAAGATTCAACAAATTTGGCAGCATGCCAATAAGGGTATAACTCAACTAATTAAGACATATCTATAATATATTAAAAAGCTACAATCTATAATCTATAATATATATTAAAAAGCTACAATCTTTGAAAAACTTTTTTGGACAATTATATCCCTCCTTAATTAATATATTTACAAAATCTACCCTGGACAATTAATTACAAATAGTAAATTAATTAATTAGGTTTTATTTATAAATATAAATGGTTAATTATCAACTATAATAAATACATATAAATTAAAAAAAATTAATACAAAAAATGTTGTCTTTTTATCTCCCACGAACTTATGGATTGATTATAGGATTTCAAAGAGTTTTGAAAATTTATTACTTTTATAACTTTTTCATACTCTTTAATTACTCTTTAATTGAATTTATTAATATATTGCTAATTAAATAAATTTAATATAATACCTTAAATTCAACATTTTCTAACGAAATTTAAAAAAAAAAACATTTTCTAATTAATTAATATCTTTACAAAATCTACCTTGACAATTAATTACAAATAGTAAAATAATAATTAAGTATTATTTATAAATATAAATGATTAATTATCCACTATAATAAATACGTATAAATAAATAAAAATTATTACAAAAAATGTTGTCCTTTTAACTCCCACGAACCTATGGATTAATTATAGGATTCAAAACTTTTGTAACTTTTACATTTTTTTTAGAAAGAACTTTTACATACTCTTTAATTACTCTTTAATTGAATTTATTATTCATTATTAATACACTGCTAATTAAATAAATTTAATATAATACCTTAAATTCAACATTTTCTAATTAAATTAAAAAAAAGTATATAATGAAATACGCTTAATATTGATACATCTAGGTTATGTCAACTATTATATAATAAAATATTACTTTAAATTTGTTAGTTTTAAATTATCAATGATGTGTGTGTTGATGGTCGATTTTGGTCAGAGGAAACTCACCTGACCTTCACGTGCCACCAACAGTTGGCGCCGTCTGTGGGGAAGAAAGCTTGCCAAATCTGCACATCGGTTGTTTAATGAGTAAGAAGATGGAAAAGGGAAACCGAAATCTAAGCCCAGAAACTTCGAAAAATAGCCGCCAGCCGCAGAGGTCACGAGACGATGATAGCATCCAGGGGTCACCAAGACGAACAGGCCGAGGAGCTGAGGCCGAGGAGAATAGGCCGAGGGGCCGAAGCCGAGGAGAGGATTCTGACGCCAAAATTGCCGCCCTTGAGGATAAGGTGAAGGGAATGAATCGGAGTTTGTCCAGAATACTCCAAATCCTGGATAAACCCGGCCCTAGCACCAAACTCCATGAGGGGGGCTTGATTAGAGACCCAAAGAAAGGGAAGGAGCCAGTCGAGTACGTGGATGAATCAGAGACAGAATCAAAAGGAAAGAAGACCGACAACGCAACCAGTAAGGTCAGGGGGCTGAAGCATGCAGAGCGCACAGTACTGAGGAGCCCAGAGCCAAGTACCAGCCATAGAACAGACTTGAGAAATCTGATCGAGGAAAAGCGCAAAATGGCCAAAACTGCCGAATCCGAGGCCAGAGCTGCCGAAGCTGAAGCCAGGGCTGCCGAGGCCGAGGCCAGAGCAGCCGAGGCCGAGGCCAAGAAGGACAATCTCCCCTGGAAGACTGAGCTTCTGAACGCACTGAAGGAGCTCGGAAATCCTCAGGGAGCCCTGCAGAAGTCAAGGGACCTTGGAGACCAAGATTTGGAAGAACTAATCGACCAAGTCGACCCGCCCTTCACAGAAGAAGTCATGAAAGCCGAGGTGCCCCAGAAGTTCAAGGTACCAACATTCAAACCGTACGATGGCAAGAAAGACCCCGTGCAACATTTAAACGCCTACAAAACTGGATGGACTTCCACGGTGTCTCAGATGCAATCAGGTGTCGCACATTCTTTTTCACTCTAACAGGATCAGCCAAGCACTGGTTTGAAAGGTTTAAGAGAAGATCCATCGGCTCTTTCAAGGAATTAGCCCGAGCATTCTTTGCACAATTCATGGGAGCCAGGGAACAGCGAAAGCCTCACATAAACCTCTTAACAGTCAAACAACAGCCGGGTGAGAGCTTGCGTGATTATATAACACGTTTTAATGACGAAGCACTACAGGTTGAGGGGTACAGCGAGGGAGCAGCCCTAGTAGCCATAACAGCTGGACTGGAAGACGAGAGACTGCTCAATTCAATAGGTAAGAGCCAACCTCGAACCTATGCGAAGTTTGTCTCCCGGGCACAAAAATACATGAGCGCAGAGGAGTTGCTCAAATCAAAAAAGTCAGAGCGTGAACACAAGAGGTCTTCTTCATCTGACCACAACAGTAGGAAGGATAAGAAGCAGCAGACCGACGAGGGAGGCCGAGGCCGACCAGACCGAGCGCATACCTTTGGTAAATTCGAGAAATATACACCAACAGTTGTTCCACAGGAGCAAGTATTGATGGAGATCCGAAATACGGGACTCCTGAAATTCCCGGGAAGGATGAAGTCAAGTCCCGATAGAAGAGACAAGAGCCAGTATTGCCTTTTCCACCGAGACCATGGACATTCAACCAGGAATTGTATTCAGTTGAAGGATGAAATCGAAGCATTGATTCAGAATGGGTATTTGAAGGAGTTCGTCGGCGAGCCCAAGGCCGAGGCCGACCAGGGATGGCCGAGGCCGAGGCCGACCAAAGATGGCCGAGACAAAAAAGAGCCCCTACGAGAGATCAGAACCATCTTTGGAGGACCAGCTGGAGGAAGTTCAAGCAGGAAGAGGAAAGCTATTGCCAGGGAAGCAAGGTTCGAACCAGAGTATCGAGGTATGTACTCTGTCCATCTATCAAAGGCGTCCCCCCCTTTGGAGTTCACCGAGGTTGAGGCAGCAAGCATTCATCAGCCACATAATGATGCTCTGGTGGTCACTCTAATTGTGGCCAATGTGAAAATCCATCGGATCCTAATTGATGGAGGAAGCTCGGCTGATGTCCTTTCTCTAGCAGCCTTTAAAGCAATGCAGTTAGAGAGGGAACTCTTAAAGCCAAGCCTTACCCCACTTGTAGGATTTGGAGGAGAGAGAGTGACCCTAGAAGGTAGCATAGAACTTCCTGTGACTTTTGGGGATGGACAGAATGCAGTGACAAAGATGATAAACTTCCTAGTTGTGGATTGTATGTCAGCCTACAATGCAATCCTAGGAAGGCCAACCTTGCATGAGATGAAGGCCATAGCTTCAACTTACCATCAGTTGCTGAAGTTTCCAACTCCGAATGGTGTGGGAGTTGTCAAAGGAGAACAGAAAGAATCAAGAGAGTGTTACTGGACCGCGCTGAAAGCCGTTAGACCACAGAGAGCCGAGGCCGACCAGAGGATGAGCCGAGGCCGAGCAGGACACACTTCCACGGATACTGAATCTGAACTTATGGAGTTTTAGGGCTTCTTATTTATTGCATTTTATCATGTAATTAGACATTATCTATTTCTGTTTCTGCCTCTTGTATAGGTTGAGTAGTTTTTCTTATTTGATTTCATTCAAGTGTAAAATTTCAATTAATGTCGAAGCCCTATTGATTCACCATTAAAGTTCAGTATTCAGGAGTGTGCACAAGACAACCGATTCAAGCATCACGAAACGCGAGCCTGGACCGTCGAGTCTACCTCGCCCCATCAGCTTGAGACAATGTGAGCCTGGACCCTGGGTCTACCTCACGAGCCATCACTTTTTGCGAGCCTGGACTACCGAGTCTACCTCGCCTCATCCAGATTGAGATTACGTGAGCCTGGACCAACGAGTCTACCTCATCTCATCTGGCTTGAGCATCATCACATCAGGCGAGCCTGGACTACCGAGTCTACCTCGCCTCATCCAGATTGAGATTACGTGAGCCTGGACCAACGAGTCTACCTCACCTCATCTGGCTTGGGCATCTTCATATCAGGCGAGCCTGGACTACCGAGTCTACCTCGCCTCATCCAGATTGAGACTATGTGAGCCTAGACCACCGAGTCTACCTCACCTCATCTGGCCTGAGCACCCTTACATCGGGCGAGCCTGGACCACCGAGTCTACCTCGTCTCATCCAAACTTGAGATTGCATGAGCCTGGACCACCGAAGTCTACCTCACCCGAGTCTAGCTCACCTGGCTGGGGCAGAAATTGA

mRNA sequence

ATGAGGCAGGTGGGGTGGAATTCGGAGGCGTTTCGGGCTGAACCAGACGGAACCGGGGCGTCCAGGGGCACCAAGGACCAAGCGAAGGCGGAAGAGCGGGCCGAGTGGTCGGCCTCGGCCCACATGGCCAAGGCCGAGCAGGGGTTGGGCCAAGGCCCGACCCTCTGGCCCGTTTCTCCTCCAAAGTCCATCTTTTGGTCCTGTTTTCGAGCTCGTGCTGTGTTGTCCTCGCCAATTCCTTACGCTTCGGAAGGAAACTCACCTGACCTTCACGTGCCACCAACAGTTGGCGCCGTCTGTGGGGAAGAAAGCTTGCCAAATCTGCACATCGGTTGTTTAATGAGTAAGAAGATGGAAAAGGGAAACCGAAATCTAAGCCCAGAAACTTCGAAAAATAGCCGCCAGCCGCAGAGGTCACGAGACGATGATAGCATCCAGGGGTCACCAAGACGAACAGGCCGAGGAGCTGAGGCCGAGGAGAATAGGCCGAGGGGCCGAAGCCGAGGAGAGGATTCTGACGCCAAAATTGCCGCCCTTGAGGATAAGGTGAAGGGAATGAATCGGAGTTTGTCCAGAATACTCCAAATCCTGGATAAACCCGGCCCTAGCACCAAACTCCATGAGGGGGGCTTGATTAGAGACCCAAAGAAAGGGAAGGAGCCAGTCGAGTACGTGGATGAATCAGAGACAGAATCAAAAGGAAAGAAGACCGACAACGCAACCAGTAAGGTCAGGGGGCTGAAGCATGCAGAGCGCACAGTACTGAGGAGCCCAGAGCCAAGTACCAGCCATAGAACAGACTTGAGAAATCTGATCGAGGAAAAGCGCAAAATGGCCAAAACTGCCGAATCCGAGGCCAGAGCTGCCGAAGCTGAAGCCAGGGCTGCCGAGGCCGAGGCCAGAGCAGCCGAGGCCGAGGCCAAGAAGGACAATCTCCCCTGGAAGACTGAGCTTCTGAACGCACTGAAGGAGCTCGGAAATCCTCAGGGAGCCCTGCAGAATAGGAAGGATAAGAAGCAGCAGACCGACGAGGGAGGCCGAGGCCGACCAGACCGAGCGCATACCTTTGGTAAATTCGAGAAATATACACCAACAGTTGTTCCACAGGAGCAAGTATTGATGGAGATCCGAAATACGGGACTCCTGAAATTCCCGGGAAGGATGAAGTCAAGTCCCGATAGAAGAGACAAGAGCCAGTATTGCCTTTTCCACCGAGACCATGGACATTCAACCAGGAATTGTATTCAGTTGAAGGATGAAATCGAAGCATTGATTCAGAATGGGTATTTGAAGGAGTTCGTCGGCGAGCCCAAGGCCGAGGCCGACCAGGGATGGCCGAGGCCGAGGCCGACCAAAGATGGCCGAGACAAAAAAGAGCCCCTACGAGAGATCAGAACCATCTTTGGAGGACCAGCTGGAGGAAGTTCAAGCAGGAAGAGGAAAGCTATTGCCAGGGAAGCAAGGTTCGAACCAGAGTATCGAGGTATGTACTCTGTCCATCTATCAAAGGCGTCCCCCCCTTTGGAGTTCACCGAGGTTGAGGCAGCAAGCATTCATCAGCCACATAATGATGCTCTGGTGGTCACTCTAATTGTGGCCAATGTGAAAATCCATCGGATCCTAATTGATGGAGGAAGCTCGGCTGATGTCCTTTCTCTAGCAGCCTTTAAAGCAATGCAGTTAGAGAGGGAACTCTTAAAGCCAAGCCTTACCCCACTTGTAGGATTTGGAGGAGAGAGAGTGACCCTAGAAGTATTCAGGAGTGTGCACAAGACAACCGATTCAAGCATCACGAAACGCGAGCCTGGACCGTCGAGTCTACCTCGCCCCATCAGCTTGAGACAATGTGAGCCTGGACCCTGGGCGAGCCTGGACTACCGAGTCTACCTCGCCTCATCCAGATTGAGACTATGTGAGCCTAGACCACCGAGTCTACCTCACCTCATCTGGCCTGAGCACCCTTACATCGGGCGAGCCTGGACCACCGAGTCTACCTCGTCTCATCCAAACTTGAGATTGCATGAGCCTGGACCACCGAAGTCTACCTCACCCGAGTCTAGCTCACCTGGCTGGGGCAGAAATTGA

Coding sequence (CDS)

ATGAGGCAGGTGGGGTGGAATTCGGAGGCGTTTCGGGCTGAACCAGACGGAACCGGGGCGTCCAGGGGCACCAAGGACCAAGCGAAGGCGGAAGAGCGGGCCGAGTGGTCGGCCTCGGCCCACATGGCCAAGGCCGAGCAGGGGTTGGGCCAAGGCCCGACCCTCTGGCCCGTTTCTCCTCCAAAGTCCATCTTTTGGTCCTGTTTTCGAGCTCGTGCTGTGTTGTCCTCGCCAATTCCTTACGCTTCGGAAGGAAACTCACCTGACCTTCACGTGCCACCAACAGTTGGCGCCGTCTGTGGGGAAGAAAGCTTGCCAAATCTGCACATCGGTTGTTTAATGAGTAAGAAGATGGAAAAGGGAAACCGAAATCTAAGCCCAGAAACTTCGAAAAATAGCCGCCAGCCGCAGAGGTCACGAGACGATGATAGCATCCAGGGGTCACCAAGACGAACAGGCCGAGGAGCTGAGGCCGAGGAGAATAGGCCGAGGGGCCGAAGCCGAGGAGAGGATTCTGACGCCAAAATTGCCGCCCTTGAGGATAAGGTGAAGGGAATGAATCGGAGTTTGTCCAGAATACTCCAAATCCTGGATAAACCCGGCCCTAGCACCAAACTCCATGAGGGGGGCTTGATTAGAGACCCAAAGAAAGGGAAGGAGCCAGTCGAGTACGTGGATGAATCAGAGACAGAATCAAAAGGAAAGAAGACCGACAACGCAACCAGTAAGGTCAGGGGGCTGAAGCATGCAGAGCGCACAGTACTGAGGAGCCCAGAGCCAAGTACCAGCCATAGAACAGACTTGAGAAATCTGATCGAGGAAAAGCGCAAAATGGCCAAAACTGCCGAATCCGAGGCCAGAGCTGCCGAAGCTGAAGCCAGGGCTGCCGAGGCCGAGGCCAGAGCAGCCGAGGCCGAGGCCAAGAAGGACAATCTCCCCTGGAAGACTGAGCTTCTGAACGCACTGAAGGAGCTCGGAAATCCTCAGGGAGCCCTGCAGAATAGGAAGGATAAGAAGCAGCAGACCGACGAGGGAGGCCGAGGCCGACCAGACCGAGCGCATACCTTTGGTAAATTCGAGAAATATACACCAACAGTTGTTCCACAGGAGCAAGTATTGATGGAGATCCGAAATACGGGACTCCTGAAATTCCCGGGAAGGATGAAGTCAAGTCCCGATAGAAGAGACAAGAGCCAGTATTGCCTTTTCCACCGAGACCATGGACATTCAACCAGGAATTGTATTCAGTTGAAGGATGAAATCGAAGCATTGATTCAGAATGGGTATTTGAAGGAGTTCGTCGGCGAGCCCAAGGCCGAGGCCGACCAGGGATGGCCGAGGCCGAGGCCGACCAAAGATGGCCGAGACAAAAAAGAGCCCCTACGAGAGATCAGAACCATCTTTGGAGGACCAGCTGGAGGAAGTTCAAGCAGGAAGAGGAAAGCTATTGCCAGGGAAGCAAGGTTCGAACCAGAGTATCGAGGTATGTACTCTGTCCATCTATCAAAGGCGTCCCCCCCTTTGGAGTTCACCGAGGTTGAGGCAGCAAGCATTCATCAGCCACATAATGATGCTCTGGTGGTCACTCTAATTGTGGCCAATGTGAAAATCCATCGGATCCTAATTGATGGAGGAAGCTCGGCTGATGTCCTTTCTCTAGCAGCCTTTAAAGCAATGCAGTTAGAGAGGGAACTCTTAAAGCCAAGCCTTACCCCACTTGTAGGATTTGGAGGAGAGAGAGTGACCCTAGAAGTATTCAGGAGTGTGCACAAGACAACCGATTCAAGCATCACGAAACGCGAGCCTGGACCGTCGAGTCTACCTCGCCCCATCAGCTTGAGACAATGTGAGCCTGGACCCTGGGCGAGCCTGGACTACCGAGTCTACCTCGCCTCATCCAGATTGAGACTATGTGAGCCTAGACCACCGAGTCTACCTCACCTCATCTGGCCTGAGCACCCTTACATCGGGCGAGCCTGGACCACCGAGTCTACCTCGTCTCATCCAAACTTGAGATTGCATGAGCCTGGACCACCGAAGTCTACCTCACCCGAGTCTAGCTCACCTGGCTGGGGCAGAAATTGA

Protein sequence

MRQVGWNSEAFRAEPDGTGASRGTKDQAKAEERAEWSASAHMAKAEQGLGQGPTLWPVSPPKSIFWSCFRARAVLSSPIPYASEGNSPDLHVPPTVGAVCGEESLPNLHIGCLMSKKMEKGNRNLSPETSKNSRQPQRSRDDDSIQGSPRRTGRGAEAEENRPRGRSRGEDSDAKIAALEDKVKGMNRSLSRILQILDKPGPSTKLHEGGLIRDPKKGKEPVEYVDESETESKGKKTDNATSKVRGLKHAERTVLRSPEPSTSHRTDLRNLIEEKRKMAKTAESEARAAEAEARAAEAEARAAEAEAKKDNLPWKTELLNALKELGNPQGALQNRKDKKQQTDEGGRGRPDRAHTFGKFEKYTPTVVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRPTKDGRDKKEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPEYRGMYSVHLSKASPPLEFTEVEAASIHQPHNDALVVTLIVANVKIHRILIDGGSSADVLSLAAFKAMQLERELLKPSLTPLVGFGGERVTLEVFRSVHKTTDSSITKREPGPSSLPRPISLRQCEPGPWASLDYRVYLASSRLRLCEPRPPSLPHLIWPEHPYIGRAWTTESTSSHPNLRLHEPGPPKSTSPESSSPGWGRN

Homology

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BLAST of Spg006377 vs. NCBI nr
Match: XP_022158830.1 (uncharacterized protein LOC111025293 [Momordica charantia])

HSP 1 Score: 250.8 bits (639), Expect = 3.5e-62
Identity = 134/257 (52.14%), Postives = 169/257 (65.76%), Query Frame = 0


Query: 328 PQGALQNRKDKKQQTDEGGRGRPDRAHTFGKFEKYTPTVVPQEQVLMEIRNTGLLKFPGR 387
           PQG+   ++D+  Q D      P R     KFEKYTPT VP EQVLMEI++  LLK+P R
Sbjct: 376 PQGSRWEKRDRSSQKD------PPR-----KFEKYTPTTVPIEQVLMEIKDQRLLKWPER 435

Query: 388 MKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPR 447
           MK+S  +R K +YCLFHRDHGH+T++C  LK+E+E LI+ GYLKE+V EPKA        
Sbjct: 436 MKASSAKRSKGRYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEEPKA-------- 495

Query: 448 PRPTKDGRDKKEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPEYRGMYSVHLSKASPP 507
              T++G   K P REIRTI GGP    S RKRKA  REAR   E   +Y  + +     
Sbjct: 496 ---TQNGESDKSPAREIRTIMGGPIERESGRKRKADVREARTSREQNEVYHAYTTNRPVT 555

Query: 508 LEFTEVEAASIHQPHNDALVVTLIVANVKIHRILIDGGSSADVLSLAAFKAMQLERELLK 567
           +EF+E EA  +  PHNDALV+ L +ANVK+HR+L+DGGSSAD++S  A+KAM L  ++LK
Sbjct: 556 IEFSEDEATHLLHPHNDALVIXLKIANVKVHRVLVDGGSSADIJSWTAYKAMDLXEKVLK 610

Query: 568 PSLTPLVGFGGERVTLE 585
            S  PLVGFG ERV  E
Sbjct: 616 XSPAPLVGFGXERVIPE 610

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BLAST of Spg006377 vs. NCBI nr
Match: XP_022159368.1 (uncharacterized protein LOC111025785 [Momordica charantia])

HSP 1 Score: 213.8 bits (543), Expect = 4.8e-51
Identity = 115/225 (51.11%), Postives = 148/225 (65.78%), Query Frame = 0


Query: 328 PQGALQNRKDKKQQTDEGGRGRPDRAHTFGKFEKYTPTVVPQEQVLMEIRNTGLLKFPGR 387
           PQG+   ++D+  Q D      P R     KFEKYTPT VP EQVLMEI++  LLK+P R
Sbjct: 160 PQGSRWEKRDRSSQKD------PPR-----KFEKYTPTTVPLEQVLMEIKDQRLLKWPER 219

Query: 388 MKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPR 447
           MK    +R K +YCLFHRDH H+T++   LK+E+E LI+ GYL+E+V EPKA        
Sbjct: 220 MKVPSTKRSKGRYCLFHRDHNHATQDYFDLKEEVEGLIRRGYLQEYVEEPKA-------- 279

Query: 448 PRPTKDGRDKKEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPEYRGMYSVHLSKASPP 507
              T++G  +K P REIRTI GGP    S+RKRKA  REAR   E   +Y  + +  S  
Sbjct: 280 ---TQNGESEKSPAREIRTIMGGPIERESARKRKADVREARPSREQNEVYHAYTTNRSVT 339

Query: 508 LEFTEVEAASIHQPHNDALVVTLIVANVKIHRILIDGGSSADVLS 553
           +EF+E EA  +  PHNDALV+TL +ANVK+HRIL+DGGSSAD++S
Sbjct: 340 IEFSEDEATHLLHPHNDALVITLKIANVKVHRILVDGGSSADIIS 362

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BLAST of Spg006377 vs. NCBI nr
Match: XP_022150028.1 (uncharacterized protein LOC111018300 [Momordica charantia])

HSP 1 Score: 203.0 bits (515), Expect = 8.5e-48
Identity = 110/220 (50.00%), Postives = 139/220 (63.18%), Query Frame = 0


Query: 366 VVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALI 425
           +VP EQVLMEI+   LL++P RM +   +R K +YCLFHRDH H+T++C  LK E++ LI
Sbjct: 1   MVPLEQVLMEIKYQRLLQWPERMNAPQSKRSKGRYCLFHRDHDHATQDCFDLKKEVKELI 60

Query: 426 QNGYLKEFVGEPKAEADQGWPRPRPTKDG-RDKKEPLREIRTIFGGPAGGSSSRKRKAIA 485
           Q GYLKE+V +PKA           T++G  D K P REIRTI GGP      RKRKA  
Sbjct: 61  QRGYLKEYVEDPKA-----------TQNGENDSKSPAREIRTIMGGPMEREFGRKRKASI 120

Query: 486 REARFEPEYRGMYSVHLSKASPPLEFTEVEAASIHQPHNDALVVTLIVANVKIHRILIDG 545
           RE R       +Y   ++K    +EF+E EA  +  PHND LV+TL +AN K+HRIL+DG
Sbjct: 121 RETRTSQVQHEIYHTFVAKQPAKIEFSEDEATHLLHPHNDVLVITLKIANAKVHRILVDG 180

Query: 546 GSSADVLSLAAFKAMQLERELLKPSLTPLVGFGGERVTLE 585
           GSSAD++SL A+KAM L     K S   LV F GERV  E
Sbjct: 181 GSSADIISLTAYKAMDLGERGRKSSPASLVRFRGERVIPE 209

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BLAST of Spg006377 vs. NCBI nr
Match: XP_022158621.1 (uncharacterized protein LOC111025072 [Momordica charantia])

HSP 1 Score: 197.2 bits (500), Expect = 4.7e-46
Identity = 99/204 (48.53%), Postives = 133/204 (65.20%), Query Frame = 0


Query: 374 MEIRNTGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEF 433
           MEI++  LLK+P RMK+   +R K +YCLFHRDHGH+T++C  L +E+E LI+ GYL+E+
Sbjct: 1   MEIKDQRLLKWPERMKAPSTKRSKGRYCLFHRDHGHATQDCFDLNEEVEGLIRRGYLEEY 60

Query: 434 VGEPKAEADQGWPRPRPTKDGRDKKEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPEY 493
           V EPKA           T++G   K P REIRTI GGP    S RKRKA  +EAR   E 
Sbjct: 61  VEEPKA-----------TQNGESDKSPAREIRTIMGGPIERESGRKRKADVQEARANREQ 120

Query: 494 RGMYSVHLSKASPPLEFTEVEAASIHQPHNDALVVTLIVANVKIHRILIDGGSSADVLSL 553
             +Y  + +     ++F+E EA  +  PHNDAL +TL +ANVK+HRIL+DGG+ AD++S 
Sbjct: 121 NEVYHAYTTNRPVTIQFSEDEATHLLHPHNDALDITLKIANVKVHRILVDGGNLADIISW 180

Query: 554 AAFKAMQLERELLKPSLTPLVGFG 578
            A+  M L  ++LK S  PL GFG
Sbjct: 181 TAYNVMDLGEKVLKSSSAPLAGFG 193

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BLAST of Spg006377 vs. NCBI nr
Match: XP_022158093.1 (uncharacterized protein LOC111024662 [Momordica charantia])

HSP 1 Score: 196.4 bits (498), Expect = 7.9e-46
Identity = 96/194 (49.48%), Postives = 129/194 (66.49%), Query Frame = 0


Query: 388 MKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPR 447
           MK+ P++R K +YCLFHRDHGH+T++C  LK+E+E LI+ GYLKE+V +PKA  +     
Sbjct: 1   MKAHPNKRSKERYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEDPKATLN----- 60

Query: 448 PRPTKDGRDKKEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPEYRGMYSVHLSKASPP 507
                   D K P++EI+TIFGGP      +KRKA  +EAR  P Y  +Y    +     
Sbjct: 61  -----SENDDKSPVKEIQTIFGGPTERELGKKRKASMQEARASPGYCKVYHASFTGQPSK 120

Query: 508 LEFTEVEAASIHQPHNDALVVTLIVANVKIHRILIDGGSSADVLSLAAFKAMQLERELLK 567
           ++F+E E   +  PHNDALV+TL + N K+HRIL+DGGSS  ++SL A+KAM L  + LK
Sbjct: 121 IKFSEDETTRLFHPHNDALVITLKITNTKVHRILVDGGSSTGIISLTAYKAMDLGEKALK 180

Query: 568 PSLTPLVGFGGERV 582
            +L PLVGFGGERV
Sbjct: 181 SNLAPLVGFGGERV 184

[Close]

BLAST of Spg006377 vs. ExPASy TrEMBL
Match: A0A6J1DWY0 (uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025293 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 1.3e-62
Identity = 135/257 (52.53%), Postives = 169/257 (65.76%), Query Frame = 0


Query: 328 PQGALQNRKDKKQQTDEGGRGRPDRAHTFGKFEKYTPTVVPQEQVLMEIRNTGLLKFPGR 387
           PQG+   ++D+  Q D      P R     KFEKYTPT VP EQVLMEI++  LLK+P R
Sbjct: 376 PQGSRWEKRDRSSQKD------PPR-----KFEKYTPTTVPIEQVLMEIKDQRLLKWPER 435

Query: 388 MKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPR 447
           MK+S  +R K +YCLFHRDHGH+T++C  LK+E+E LI+ GYLKE+V EPKA        
Sbjct: 436 MKASSAKRSKGRYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEEPKA-------- 495

Query: 448 PRPTKDGRDKKEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPEYRGMYSVHLSKASPP 507
              T++G   K P REIRTI GGP    S RKRKA  REAR   E   +Y  + +     
Sbjct: 496 ---TQNGESDKSPAREIRTIMGGPIERESGRKRKADVREARTSREQNEVYHAYTTNRPVT 555

Query: 508 LEFTEVEAASIHQPHNDALVVTLIVANVKIHRILIDGGSSADVLSLAAFKAMQLERELLK 567
           +EF+E EA  +  PHNDALV+ L +ANVK+HR+L+DGGSSAD+LS  A+KAM L  ++LK
Sbjct: 556 IEFSEDEATHLLHPHNDALVIXLKIANVKVHRVLVDGGSSADILSWTAYKAMDLXEKVLK 610

Query: 568 PSLTPLVGFGGERVTLE 585
            S  PLVGFG ERV  E
Sbjct: 616 XSPAPLVGFGXERVIPE 610

[Close]

BLAST of Spg006377 vs. ExPASy TrEMBL
Match: A0A6J1DYL6 (uncharacterized protein LOC111025785 OS=Momordica charantia OX=3673 GN=LOC111025785 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 2.3e-51
Identity = 115/225 (51.11%), Postives = 148/225 (65.78%), Query Frame = 0


Query: 328 PQGALQNRKDKKQQTDEGGRGRPDRAHTFGKFEKYTPTVVPQEQVLMEIRNTGLLKFPGR 387
           PQG+   ++D+  Q D      P R     KFEKYTPT VP EQVLMEI++  LLK+P R
Sbjct: 160 PQGSRWEKRDRSSQKD------PPR-----KFEKYTPTTVPLEQVLMEIKDQRLLKWPER 219

Query: 388 MKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPR 447
           MK    +R K +YCLFHRDH H+T++   LK+E+E LI+ GYL+E+V EPKA        
Sbjct: 220 MKVPSTKRSKGRYCLFHRDHNHATQDYFDLKEEVEGLIRRGYLQEYVEEPKA-------- 279

Query: 448 PRPTKDGRDKKEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPEYRGMYSVHLSKASPP 507
              T++G  +K P REIRTI GGP    S+RKRKA  REAR   E   +Y  + +  S  
Sbjct: 280 ---TQNGESEKSPAREIRTIMGGPIERESARKRKADVREARPSREQNEVYHAYTTNRSVT 339

Query: 508 LEFTEVEAASIHQPHNDALVVTLIVANVKIHRILIDGGSSADVLS 553
           +EF+E EA  +  PHNDALV+TL +ANVK+HRIL+DGGSSAD++S
Sbjct: 340 IEFSEDEATHLLHPHNDALVITLKIANVKVHRILVDGGSSADIIS 362

[Close]

BLAST of Spg006377 vs. ExPASy TrEMBL
Match: A0A6J1D8C9 (uncharacterized protein LOC111018300 OS=Momordica charantia OX=3673 GN=LOC111018300 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 4.1e-48
Identity = 110/220 (50.00%), Postives = 139/220 (63.18%), Query Frame = 0


Query: 366 VVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALI 425
           +VP EQVLMEI+   LL++P RM +   +R K +YCLFHRDH H+T++C  LK E++ LI
Sbjct: 1   MVPLEQVLMEIKYQRLLQWPERMNAPQSKRSKGRYCLFHRDHDHATQDCFDLKKEVKELI 60

Query: 426 QNGYLKEFVGEPKAEADQGWPRPRPTKDG-RDKKEPLREIRTIFGGPAGGSSSRKRKAIA 485
           Q GYLKE+V +PKA           T++G  D K P REIRTI GGP      RKRKA  
Sbjct: 61  QRGYLKEYVEDPKA-----------TQNGENDSKSPAREIRTIMGGPMEREFGRKRKASI 120

Query: 486 REARFEPEYRGMYSVHLSKASPPLEFTEVEAASIHQPHNDALVVTLIVANVKIHRILIDG 545
           RE R       +Y   ++K    +EF+E EA  +  PHND LV+TL +AN K+HRIL+DG
Sbjct: 121 RETRTSQVQHEIYHTFVAKQPAKIEFSEDEATHLLHPHNDVLVITLKIANAKVHRILVDG 180

Query: 546 GSSADVLSLAAFKAMQLERELLKPSLTPLVGFGGERVTLE 585
           GSSAD++SL A+KAM L     K S   LV F GERV  E
Sbjct: 181 GSSADIISLTAYKAMDLGERGRKSSPASLVRFRGERVIPE 209

[Close]

BLAST of Spg006377 vs. ExPASy TrEMBL
Match: A0A6J1E1G3 (uncharacterized protein LOC111025072 OS=Momordica charantia OX=3673 GN=LOC111025072 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 2.3e-46
Identity = 99/204 (48.53%), Postives = 133/204 (65.20%), Query Frame = 0


Query: 374 MEIRNTGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEF 433
           MEI++  LLK+P RMK+   +R K +YCLFHRDHGH+T++C  L +E+E LI+ GYL+E+
Sbjct: 1   MEIKDQRLLKWPERMKAPSTKRSKGRYCLFHRDHGHATQDCFDLNEEVEGLIRRGYLEEY 60

Query: 434 VGEPKAEADQGWPRPRPTKDGRDKKEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPEY 493
           V EPKA           T++G   K P REIRTI GGP    S RKRKA  +EAR   E 
Sbjct: 61  VEEPKA-----------TQNGESDKSPAREIRTIMGGPIERESGRKRKADVQEARANREQ 120

Query: 494 RGMYSVHLSKASPPLEFTEVEAASIHQPHNDALVVTLIVANVKIHRILIDGGSSADVLSL 553
             +Y  + +     ++F+E EA  +  PHNDAL +TL +ANVK+HRIL+DGG+ AD++S 
Sbjct: 121 NEVYHAYTTNRPVTIQFSEDEATHLLHPHNDALDITLKIANVKVHRILVDGGNLADIISW 180

Query: 554 AAFKAMQLERELLKPSLTPLVGFG 578
            A+  M L  ++LK S  PL GFG
Sbjct: 181 TAYNVMDLGEKVLKSSSAPLAGFG 193

[Close]

BLAST of Spg006377 vs. ExPASy TrEMBL
Match: A0A6J1DV51 (uncharacterized protein LOC111024662 OS=Momordica charantia OX=3673 GN=LOC111024662 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 3.8e-46
Identity = 96/194 (49.48%), Postives = 129/194 (66.49%), Query Frame = 0


Query: 388 MKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPR 447
           MK+ P++R K +YCLFHRDHGH+T++C  LK+E+E LI+ GYLKE+V +PKA  +     
Sbjct: 1   MKAHPNKRSKERYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEDPKATLN----- 60

Query: 448 PRPTKDGRDKKEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPEYRGMYSVHLSKASPP 507
                   D K P++EI+TIFGGP      +KRKA  +EAR  P Y  +Y    +     
Sbjct: 61  -----SENDDKSPVKEIQTIFGGPTERELGKKRKASMQEARASPGYCKVYHASFTGQPSK 120

Query: 508 LEFTEVEAASIHQPHNDALVVTLIVANVKIHRILIDGGSSADVLSLAAFKAMQLERELLK 567
           ++F+E E   +  PHNDALV+TL + N K+HRIL+DGGSS  ++SL A+KAM L  + LK
Sbjct: 121 IKFSEDETTRLFHPHNDALVITLKITNTKVHRILVDGGSSTGIISLTAYKAMDLGEKALK 180

Query: 568 PSLTPLVGFGGERV 582
            +L PLVGFGGERV
Sbjct: 181 SNLAPLVGFGGERV 184

The following BLAST results are available for this feature:

BLAST of Spg006377 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158830.1	3.5e-62	52.14	uncharacterized protein LOC111025293 [Momordica charantia]	[more]
XP_022159368.1	4.8e-51	51.11	uncharacterized protein LOC111025785 [Momordica charantia]	[more]
XP_022150028.1	8.5e-48	50.00	uncharacterized protein LOC111018300 [Momordica charantia]	[more]
XP_022158621.1	4.7e-46	48.53	uncharacterized protein LOC111025072 [Momordica charantia]	[more]
XP_022158093.1	7.9e-46	49.48	uncharacterized protein LOC111024662 [Momordica charantia]	[more]

BLAST of Spg006377 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg006377 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DWY0	1.3e-62	52.53	uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DYL6	2.3e-51	51.11	uncharacterized protein LOC111025785 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1D8C9	4.1e-48	50.00	uncharacterized protein LOC111018300 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A6J1E1G3	2.3e-46	48.53	uncharacterized protein LOC111025072 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DV51	3.8e-46	49.48	uncharacterized protein LOC111024662 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]

BLAST of Spg006377 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 265..308
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 326..356
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 437..481
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 199..309
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 437..464
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..175
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 592..611
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 680..694
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 336..356
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 209..255
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 662..694
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..175
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 262..309
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..39

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg006377.1	Spg006377.1	mRNA