Spg006376 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg006376
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	transcription factor VIP1-like
Location	scaffold4: 4423904 .. 4424626 (-)
RNA-Seq Expression	Spg006376
Synteny	Spg006376

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTGAACTTCACCGCCCGGAAACCCCCGCAGACGGCGGTGAGGATGGACATAGAACTGATGCCGGAGGCTCCACAGCGTGCTTATCACCACCGTCGTTCCCACTCCGATACCTCCTTCCGCTTCGCTAATTTCGAGGATCTTATTCTCTTCGACCCTCCCGACCTCGATTTGTCATCTTCCCTTCCTTCTCTGTCGCCGACGGGGGCTCGTGTGGCTGTCGATTCCTTCAATTCCAAGTCCCCTAAAGATGCCTCTGCCTCGAAACCTAGGGCTGGTAACGGCAACTCCGCTTCCTTCGGCGCTCACTGCGGGAGCTTTTCGATGGATTCCGACTTCTTCGAGGGCTTGGGGATGGCCGGAGATGGCAGCAACGGTGAGATACTCGGCGGGAGAGTGACGGTTGGGGAGAAGAAAATGGGCCGCCATAGGCATAGTAATTCCATGGATGGCTCTTTGACGTCCTCGTTTGAAGCTGAGTCCACCGACGAAATTGATTGCTCCTCCTCCCCGGAAAAAAAAAAACAGAAGAAAGAAAAGAAAGGAGAAGAAGAGAAGGAAGGAAGAAGAAGAAGGAAGGAAAAAGAAAAAAAAAATTCAGTCGCCGTTTGCCGGCAGCGACGGCGGCCGGCCACCGGAGCGAAGAAGAAGGAGATAAGGAGAGAAGAAGATGGAGAGGAGAAAGAAGATGGAGAAGAAAGAAAGAGAGAGAATTTTTAA

mRNA sequence

ATGGATTTGAACTTCACCGCCCGGAAACCCCCGCAGACGGCGGTGAGGATGGACATAGAACTGATGCCGGAGGCTCCACAGCGTGCTTATCACCACCGTCGTTCCCACTCCGATACCTCCTTCCGCTTCGCTAATTTCGAGGATCTTATTCTCTTCGACCCTCCCGACCTCGATTTGTCATCTTCCCTTCCTTCTCTGTCGCCGACGGGGGCTCGTGTGGCTGTCGATTCCTTCAATTCCAAGTCCCCTAAAGATGCCTCTGCCTCGAAACCTAGGGCTGGTAACGGCAACTCCGCTTCCTTCGGCGCTCACTGCGGGAGCTTTTCGATGGATTCCGACTTCTTCGAGGGCTTGGGGATGGCCGGAGATGGCAGCAACGGTGAGATACTCGGCGGGAGAGTGACGGTTGGGGAGAAGAAAATGGGCCGCCATAGGCATAGTAATTCCATGGATGGCTCTTTGACGTCCTCGTTTGAAGCTGAGTCCACCGACGAAATTGATTGCTCCTCCTCCCCGGAAAAAAAAAAACAGAAGAAAGAAAAGAAAGGAGAAGAAGAGAAGGAAGGAAGAAGAAGAAGGAAGGAAAAAGAAAAAAAAAATTCAGTCGCCGTTTGCCGGCAGCGACGGCGGCCGGCCACCGGAGCGAAGAAGAAGGAGATAAGGAGAGAAGAAGATGGAGAGGAGAAAGAAGATGGAGAAGAAAGAAAGAGAGAGAATTTTTAA

Coding sequence (CDS)

ATGGATTTGAACTTCACCGCCCGGAAACCCCCGCAGACGGCGGTGAGGATGGACATAGAACTGATGCCGGAGGCTCCACAGCGTGCTTATCACCACCGTCGTTCCCACTCCGATACCTCCTTCCGCTTCGCTAATTTCGAGGATCTTATTCTCTTCGACCCTCCCGACCTCGATTTGTCATCTTCCCTTCCTTCTCTGTCGCCGACGGGGGCTCGTGTGGCTGTCGATTCCTTCAATTCCAAGTCCCCTAAAGATGCCTCTGCCTCGAAACCTAGGGCTGGTAACGGCAACTCCGCTTCCTTCGGCGCTCACTGCGGGAGCTTTTCGATGGATTCCGACTTCTTCGAGGGCTTGGGGATGGCCGGAGATGGCAGCAACGGTGAGATACTCGGCGGGAGAGTGACGGTTGGGGAGAAGAAAATGGGCCGCCATAGGCATAGTAATTCCATGGATGGCTCTTTGACGTCCTCGTTTGAAGCTGAGTCCACCGACGAAATTGATTGCTCCTCCTCCCCGGAAAAAAAAAAACAGAAGAAAGAAAAGAAAGGAGAAGAAGAGAAGGAAGGAAGAAGAAGAAGGAAGGAAAAAGAAAAAAAAAATTCAGTCGCCGTTTGCCGGCAGCGACGGCGGCCGGCCACCGGAGCGAAGAAGAAGGAGATAAGGAGAGAAGAAGATGGAGAGGAGAAAGAAGATGGAGAAGAAAGAAAGAGAGAGAATTTTTAA

Protein sequence

MDLNFTARKPPQTAVRMDIELMPEAPQRAYHHRRSHSDTSFRFANFEDLILFDPPDLDLSSSLPSLSPTGARVAVDSFNSKSPKDASASKPRAGNGNSASFGAHCGSFSMDSDFFEGLGMAGDGSNGEILGGRVTVGEKKMGRHRHSNSMDGSLTSSFEAESTDEIDCSSSPEKKKQKKEKKGEEEKEGRRRRKEKEKKNSVAVCRQRRRPATGAKKKEIRREEDGEEKEDGEERKRENF

Homology

[Close]

BLAST of Spg006376 vs. NCBI nr
Match: XP_038886256.1 (transcription factor VIP1-like [Benincasa hispida])

HSP 1 Score: 251.1 bits (640), Expect = 9.4e-63
Identity = 151/229 (65.94%), Postives = 176/229 (76.86%), Query Frame = 0


Query: 1   MDLNFTARKPPQTAVRMDIELMPEAPQRAYHHRRSHSDTSFRFANFEDLILFDPPDLDLS 60
           MDLNFTARKPP  A +MDIE MPEAP R YHHRRSHSDTSFRFANF+DL+LFDPPD+D S
Sbjct: 2   MDLNFTARKPPHVAAKMDIEQMPEAPHRGYHHRRSHSDTSFRFANFDDLLLFDPPDIDSS 61

Query: 61  SSLPSLS------PTGARVAVDSFNSKSPKDASASKPRAGNGNSAS-FGAHCGSFSMDSD 120
           S+LPS S      PTGAR+AVDSFNSKSP+DASA+KPRAGNGNSAS F +H  S SMDSD
Sbjct: 62  SALPSPSPSPSPTPTGARMAVDSFNSKSPEDASATKPRAGNGNSASLFNSHYRSLSMDSD 121

Query: 121 FFEGLGMAGDGSNGEILGGRVTVGEKKMGRHRHSNSMDGSLTSSFEAESTDEIDCSSSPE 180
           FFEGLGMAGDGS+GE+L GRVT GEKKMGRHRHSNSMDGSLTSSFEA+ST  IDCS    
Sbjct: 122 FFEGLGMAGDGSDGEVLAGRVTAGEKKMGRHRHSNSMDGSLTSSFEADSTVVIDCS---- 181

Query: 181 KKKQKKEKKGE-EEKEGRRRRKEKEKKNSVAVCRQRRRPATGAKKKEIR 222
           KK    +K  E    + +R ++    + S A  ++R+   T   +K+++
Sbjct: 182 KKAMAPDKLAELALMDPKRAKRILANRQSAARSKERKIRYTNELEKKVQ 226

[Close]

BLAST of Spg006376 vs. NCBI nr
Match: XP_023548041.1 (transcription factor VIP1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 250.0 bits (637), Expect = 2.1e-62
Identity = 151/230 (65.65%), Postives = 176/230 (76.52%), Query Frame = 0


Query: 1   MDLNFTARKPPQTAVRMDIELMPEAPQRAYHHRRSHSDTSFRFANFEDLILFDPPDLDLS 60
           MDLNFTARKPPQTA RMDIE MPE PQR YHHRRSHSDTSFRFANF+DL+LFD PD DLS
Sbjct: 2   MDLNFTARKPPQTATRMDIEQMPETPQRGYHHRRSHSDTSFRFANFDDLLLFDHPDHDLS 61

Query: 61  SSL------PSLSPTGARVAVDSFNSKSPKDASASKPRAGNGNSAS--FGAHCGSFSMDS 120
           SSL      PS +P GAR+A+DSFNSKSP DASASKP+A N  SAS  FGAHC S SMDS
Sbjct: 62  SSLRSPSPSPSPTPVGARMALDSFNSKSPDDASASKPKASNDTSASDFFGAHCRSLSMDS 121

Query: 121 DFFEGLGMAGDGSNGEILGGRVTVGEKKMGRHRHSNSMDGSLTSSFEAESTDEIDCSSSP 180
           DFF+GLG+AGDGS+GE+LGGRVTVGEKK+GRHRHSNSMDG+LTSSFEAEST  IDCS   
Sbjct: 122 DFFDGLGIAGDGSDGEVLGGRVTVGEKKIGRHRHSNSMDGALTSSFEAESTGVIDCS--- 181

Query: 181 EKKKQKKEKKGE-EEKEGRRRRKEKEKKNSVAVCRQRRRPATGAKKKEIR 222
            KK    +K  E    + +R ++    + S A  ++R+   T   +K+++
Sbjct: 182 -KKAMAPDKLAELALMDPKRAKRILANRQSAARSKERKIRYTNELEKKVQ 227

[Close]

BLAST of Spg006376 vs. NCBI nr
Match: XP_022990404.1 (transcription factor VIP1-like [Cucurbita maxima])

HSP 1 Score: 247.7 bits (631), Expect = 1.0e-61
Identity = 150/230 (65.22%), Postives = 175/230 (76.09%), Query Frame = 0


Query: 1   MDLNFTARKPPQTAVRMDIELMPEAPQRAYHHRRSHSDTSFRFANFEDLILFDPPDLDLS 60
           MDLNFTARKPPQTA RMDIE MPE PQR YHHRRSHSDTSFRFANF+DL+LFD PD DLS
Sbjct: 2   MDLNFTARKPPQTATRMDIEQMPETPQRGYHHRRSHSDTSFRFANFDDLLLFDHPDHDLS 61

Query: 61  SSL------PSLSPTGARVAVDSFNSKSPKDASASKPRAGNGNSAS--FGAHCGSFSMDS 120
           SSL      PS +P GAR+A+DSFNSKSP DASASKP+A    SAS  FGAHC S SMDS
Sbjct: 62  SSLRSPSPSPSPTPVGARMALDSFNSKSPDDASASKPKASKDTSASDFFGAHCRSLSMDS 121

Query: 121 DFFEGLGMAGDGSNGEILGGRVTVGEKKMGRHRHSNSMDGSLTSSFEAESTDEIDCSSSP 180
           DFF+GLG+AGDGS+GE+LGGRVTVGEKK+GRHRHSNSMDG+LTSSFEAEST  IDCS   
Sbjct: 122 DFFDGLGIAGDGSDGEVLGGRVTVGEKKIGRHRHSNSMDGALTSSFEAESTGVIDCS--- 181

Query: 181 EKKKQKKEKKGE-EEKEGRRRRKEKEKKNSVAVCRQRRRPATGAKKKEIR 222
            KK    +K  E    + +R ++    + S A  ++R+   T   +K+++
Sbjct: 182 -KKAMAPDKLAELALMDPKRAKRILANRQSAARSKERKIRYTNELEKKVQ 227

[Close]

BLAST of Spg006376 vs. NCBI nr
Match: XP_022956511.1 (transcription factor VIP1-like [Cucurbita moschata])

HSP 1 Score: 246.9 bits (629), Expect = 1.8e-61
Identity = 149/230 (64.78%), Postives = 175/230 (76.09%), Query Frame = 0


Query: 1   MDLNFTARKPPQTAVRMDIELMPEAPQRAYHHRRSHSDTSFRFANFEDLILFDPPDLDLS 60
           MDLNFTARKPPQTA RMDIE MPE P R YHHRRSHSDTSFRFANF+DL+LFD PD DLS
Sbjct: 2   MDLNFTARKPPQTATRMDIEQMPETPHRGYHHRRSHSDTSFRFANFDDLLLFDHPDHDLS 61

Query: 61  SSL------PSLSPTGARVAVDSFNSKSPKDASASKPRAGNGNSAS--FGAHCGSFSMDS 120
           SSL      PS +P GAR+A+DSFNSKSP DASASKP+A N  SAS  FGAHC S SMDS
Sbjct: 62  SSLRSPSPSPSPTPVGARMALDSFNSKSPDDASASKPKASNDTSASDFFGAHCRSLSMDS 121

Query: 121 DFFEGLGMAGDGSNGEILGGRVTVGEKKMGRHRHSNSMDGSLTSSFEAESTDEIDCSSSP 180
           DFF+GLG+AGDGS+GE+LGGRVTVGEKK+GRHRHSNSMDG+LTSSFEAEST  IDCS   
Sbjct: 122 DFFDGLGIAGDGSDGEVLGGRVTVGEKKIGRHRHSNSMDGALTSSFEAESTGVIDCS--- 181

Query: 181 EKKKQKKEKKGE-EEKEGRRRRKEKEKKNSVAVCRQRRRPATGAKKKEIR 222
            +K    +K  E    + +R ++    + S A  ++R+   T   +K+++
Sbjct: 182 -RKAMAPDKLAELALMDPKRAKRILANRQSAARSKERKIRYTNELEKKVQ 227

[Close]

BLAST of Spg006376 vs. NCBI nr
Match: XP_008441523.1 (PREDICTED: transcription factor VIP1-like [Cucumis melo] >KAA0054921.1 transcription factor VIP1-like [Cucumis melo var. makuwa] >TYK22710.1 transcription factor VIP1-like [Cucumis melo var. makuwa])

HSP 1 Score: 244.6 bits (623), Expect = 8.8e-61
Identity = 150/229 (65.50%), Postives = 175/229 (76.42%), Query Frame = 0


Query: 1   MDLNFTARKPPQTAVRMDIELMPEAPQRAYHHRRSHSDTSFRFANFEDLILFDPPDLDLS 60
           MDLNFTARKPP TA RMDIE MPEAP R+YHHRRSHSDTSFRFANF+DL+LFD PD+DLS
Sbjct: 21  MDLNFTARKPPHTAARMDIEHMPEAPHRSYHHRRSHSDTSFRFANFDDLLLFDSPDVDLS 80

Query: 61  SSLPSLS------PTGARVAVDSFNSKSPKDASASKPRAGNGNSAS-FGAHCGSFSMDSD 120
           SSLPS S      P+GAR+AVDSFNSKSP+DAS +KPRAGNGNSAS F +H  S SMDSD
Sbjct: 81  SSLPSPSPSPSPTPSGARMAVDSFNSKSPEDASTTKPRAGNGNSASFFNSHYRSLSMDSD 140

Query: 121 FFEGLGMAGDGSNGEILGGRVTVGEKKMGRHRHSNSMDGSLTSSFEAESTDEIDCSSSPE 180
           FFEGLGMAGDGS+GEIL GRVT GEKK+GRHRHSNSMDGSLTSSFE +ST  ID S    
Sbjct: 141 FFEGLGMAGDGSDGEILAGRVTAGEKKIGRHRHSNSMDGSLTSSFEGDSTVVIDSS---- 200

Query: 181 KKKQKKEKKGE-EEKEGRRRRKEKEKKNSVAVCRQRRRPATGAKKKEIR 222
           KK    +K  E    + +R ++    + S A  ++R+   T   +K+++
Sbjct: 201 KKAMAPDKLAELALMDPKRAKRILANRQSAARSKERKIRYTNELEKKVQ 245

[Close]

BLAST of Spg006376 vs. ExPASy Swiss-Prot
Match: Q9MA75 (Transcription factor VIP1 OS=Arabidopsis thaliana OX=3702 GN=VIP1 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 8.1e-09
Identity = 82/237 (34.60%), Postives = 109/237 (45.99%), Query Frame = 0


Query: 11  PQTAVRMDIELMPEAP-QRAYHHRRSHSDTSFRFANFEDLILFDPPDLDLSS-------- 70
           P   +  +IE MPEAP QR  HHRR+ S+T F   + +DL+LFDP D+D SS        
Sbjct: 8   PNQTILSEIEHMPEAPRQRISHHRRARSETFFSGESIDDLLLFDPSDIDFSSLDFLNAPP 67

Query: 71  ------SLPSLSPTGARVAVDSFNSKSPKDASASKPRAGNGNSASFGAHCGSFSMDSDFF 130
                   P  SP        S N   P ++   KP       A FG H  SFS+DSDFF
Sbjct: 68  PPQQSQQQPQASPMSVDSEETSSNGVVPPNSLPPKP------EARFGRHVRSFSVDSDFF 127

Query: 131 EGLGMAGDGSNGEILGGRVTVGEKKMGRHRH--SNSMDGSLTS-SFEAESTDEIDCSSSP 190
           + LG+  +           + GEKK G H H  SNSMDG ++S SF  ES   I  S S 
Sbjct: 128 DDLGVTEEKFIA------TSSGEKKKGNHHHSRSNSMDGEMSSASFNIES---ILASVSG 187

Query: 191 EKKKQKKEKKGEEEKEGRRRRKEKEKKNSVAVCRQRRRPATGAKKKEIRREEDGEEK 230
           +   +K    G +          K  K  +A     R+ A  +K+++IR   + E K
Sbjct: 188 KDSGKKNMGMGGDRLAELALLDPKRAKRILA----NRQSAARSKERKIRYTGELERK 225

[Close]

BLAST of Spg006376 vs. ExPASy TrEMBL
Match: A0A6J1JRY6 (transcription factor VIP1-like OS=Cucurbita maxima OX=3661 GN=LOC111487272 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 5.0e-62
Identity = 150/230 (65.22%), Postives = 175/230 (76.09%), Query Frame = 0


Query: 1   MDLNFTARKPPQTAVRMDIELMPEAPQRAYHHRRSHSDTSFRFANFEDLILFDPPDLDLS 60
           MDLNFTARKPPQTA RMDIE MPE PQR YHHRRSHSDTSFRFANF+DL+LFD PD DLS
Sbjct: 2   MDLNFTARKPPQTATRMDIEQMPETPQRGYHHRRSHSDTSFRFANFDDLLLFDHPDHDLS 61

Query: 61  SSL------PSLSPTGARVAVDSFNSKSPKDASASKPRAGNGNSAS--FGAHCGSFSMDS 120
           SSL      PS +P GAR+A+DSFNSKSP DASASKP+A    SAS  FGAHC S SMDS
Sbjct: 62  SSLRSPSPSPSPTPVGARMALDSFNSKSPDDASASKPKASKDTSASDFFGAHCRSLSMDS 121

Query: 121 DFFEGLGMAGDGSNGEILGGRVTVGEKKMGRHRHSNSMDGSLTSSFEAESTDEIDCSSSP 180
           DFF+GLG+AGDGS+GE+LGGRVTVGEKK+GRHRHSNSMDG+LTSSFEAEST  IDCS   
Sbjct: 122 DFFDGLGIAGDGSDGEVLGGRVTVGEKKIGRHRHSNSMDGALTSSFEAESTGVIDCS--- 181

Query: 181 EKKKQKKEKKGE-EEKEGRRRRKEKEKKNSVAVCRQRRRPATGAKKKEIR 222
            KK    +K  E    + +R ++    + S A  ++R+   T   +K+++
Sbjct: 182 -KKAMAPDKLAELALMDPKRAKRILANRQSAARSKERKIRYTNELEKKVQ 227

[Close]

BLAST of Spg006376 vs. ExPASy TrEMBL
Match: A0A6J1GWS4 (transcription factor VIP1-like OS=Cucurbita moschata OX=3662 GN=LOC111458227 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 8.6e-62
Identity = 149/230 (64.78%), Postives = 175/230 (76.09%), Query Frame = 0


Query: 1   MDLNFTARKPPQTAVRMDIELMPEAPQRAYHHRRSHSDTSFRFANFEDLILFDPPDLDLS 60
           MDLNFTARKPPQTA RMDIE MPE P R YHHRRSHSDTSFRFANF+DL+LFD PD DLS
Sbjct: 2   MDLNFTARKPPQTATRMDIEQMPETPHRGYHHRRSHSDTSFRFANFDDLLLFDHPDHDLS 61

Query: 61  SSL------PSLSPTGARVAVDSFNSKSPKDASASKPRAGNGNSAS--FGAHCGSFSMDS 120
           SSL      PS +P GAR+A+DSFNSKSP DASASKP+A N  SAS  FGAHC S SMDS
Sbjct: 62  SSLRSPSPSPSPTPVGARMALDSFNSKSPDDASASKPKASNDTSASDFFGAHCRSLSMDS 121

Query: 121 DFFEGLGMAGDGSNGEILGGRVTVGEKKMGRHRHSNSMDGSLTSSFEAESTDEIDCSSSP 180
           DFF+GLG+AGDGS+GE+LGGRVTVGEKK+GRHRHSNSMDG+LTSSFEAEST  IDCS   
Sbjct: 122 DFFDGLGIAGDGSDGEVLGGRVTVGEKKIGRHRHSNSMDGALTSSFEAESTGVIDCS--- 181

Query: 181 EKKKQKKEKKGE-EEKEGRRRRKEKEKKNSVAVCRQRRRPATGAKKKEIR 222
            +K    +K  E    + +R ++    + S A  ++R+   T   +K+++
Sbjct: 182 -RKAMAPDKLAELALMDPKRAKRILANRQSAARSKERKIRYTNELEKKVQ 227

[Close]

BLAST of Spg006376 vs. ExPASy TrEMBL
Match: A0A5A7UMX9 (Transcription factor VIP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00300 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 4.3e-61
Identity = 150/229 (65.50%), Postives = 175/229 (76.42%), Query Frame = 0


Query: 1   MDLNFTARKPPQTAVRMDIELMPEAPQRAYHHRRSHSDTSFRFANFEDLILFDPPDLDLS 60
           MDLNFTARKPP TA RMDIE MPEAP R+YHHRRSHSDTSFRFANF+DL+LFD PD+DLS
Sbjct: 21  MDLNFTARKPPHTAARMDIEHMPEAPHRSYHHRRSHSDTSFRFANFDDLLLFDSPDVDLS 80

Query: 61  SSLPSLS------PTGARVAVDSFNSKSPKDASASKPRAGNGNSAS-FGAHCGSFSMDSD 120
           SSLPS S      P+GAR+AVDSFNSKSP+DAS +KPRAGNGNSAS F +H  S SMDSD
Sbjct: 81  SSLPSPSPSPSPTPSGARMAVDSFNSKSPEDASTTKPRAGNGNSASFFNSHYRSLSMDSD 140

Query: 121 FFEGLGMAGDGSNGEILGGRVTVGEKKMGRHRHSNSMDGSLTSSFEAESTDEIDCSSSPE 180
           FFEGLGMAGDGS+GEIL GRVT GEKK+GRHRHSNSMDGSLTSSFE +ST  ID S    
Sbjct: 141 FFEGLGMAGDGSDGEILAGRVTAGEKKIGRHRHSNSMDGSLTSSFEGDSTVVIDSS---- 200

Query: 181 KKKQKKEKKGE-EEKEGRRRRKEKEKKNSVAVCRQRRRPATGAKKKEIR 222
           KK    +K  E    + +R ++    + S A  ++R+   T   +K+++
Sbjct: 201 KKAMAPDKLAELALMDPKRAKRILANRQSAARSKERKIRYTNELEKKVQ 245

[Close]

BLAST of Spg006376 vs. ExPASy TrEMBL
Match: A0A1S3B3P0 (transcription factor VIP1-like OS=Cucumis melo OX=3656 GN=LOC103485625 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 4.3e-61
Identity = 150/229 (65.50%), Postives = 175/229 (76.42%), Query Frame = 0


Query: 1   MDLNFTARKPPQTAVRMDIELMPEAPQRAYHHRRSHSDTSFRFANFEDLILFDPPDLDLS 60
           MDLNFTARKPP TA RMDIE MPEAP R+YHHRRSHSDTSFRFANF+DL+LFD PD+DLS
Sbjct: 21  MDLNFTARKPPHTAARMDIEHMPEAPHRSYHHRRSHSDTSFRFANFDDLLLFDSPDVDLS 80

Query: 61  SSLPSLS------PTGARVAVDSFNSKSPKDASASKPRAGNGNSAS-FGAHCGSFSMDSD 120
           SSLPS S      P+GAR+AVDSFNSKSP+DAS +KPRAGNGNSAS F +H  S SMDSD
Sbjct: 81  SSLPSPSPSPSPTPSGARMAVDSFNSKSPEDASTTKPRAGNGNSASFFNSHYRSLSMDSD 140

Query: 121 FFEGLGMAGDGSNGEILGGRVTVGEKKMGRHRHSNSMDGSLTSSFEAESTDEIDCSSSPE 180
           FFEGLGMAGDGS+GEIL GRVT GEKK+GRHRHSNSMDGSLTSSFE +ST  ID S    
Sbjct: 141 FFEGLGMAGDGSDGEILAGRVTAGEKKIGRHRHSNSMDGSLTSSFEGDSTVVIDSS---- 200

Query: 181 KKKQKKEKKGE-EEKEGRRRRKEKEKKNSVAVCRQRRRPATGAKKKEIR 222
           KK    +K  E    + +R ++    + S A  ++R+   T   +K+++
Sbjct: 201 KKAMAPDKLAELALMDPKRAKRILANRQSAARSKERKIRYTNELEKKVQ 245

[Close]

BLAST of Spg006376 vs. ExPASy TrEMBL
Match: A0A0A0KBC6 (BZIP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G057150 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 4.0e-59
Identity = 140/210 (66.67%), Postives = 166/210 (79.05%), Query Frame = 0


Query: 1   MDLNFTARKPPQTAVRMDIELMPEAPQRAYHHRRSHSDTSFRFANFEDLILFDPPDLDLS 60
           MDLNFTARKPP T+ RMDIE MPEAP R+YHHRRSHSDTSFRFANF+DL+LFD PD+DLS
Sbjct: 21  MDLNFTARKPPHTSARMDIEHMPEAPHRSYHHRRSHSDTSFRFANFDDLLLFDSPDIDLS 80

Query: 61  SSLPSLS------PTGARVAVDSFNSKSPKDASASKPRAGNGNSAS-FGAHCGSFSMDSD 120
           S+LPS S      P+GAR+AVDSFNSKSP+DAS +KPRA NGNSAS F +H  S SMDSD
Sbjct: 81  SALPSPSPSPSPTPSGARMAVDSFNSKSPEDASTTKPRAANGNSASFFNSHYRSLSMDSD 140

Query: 121 FFEGLGMAGDGSNGEILGGRVTVGEKKMGRHRHSNSMDGSLTSSFEAESTDEIDCSSSPE 180
           FFEGLGMAGDGS+GEILGGRVT GEKK+ RHRHSNSMDGSLTSSFE +S+ +   + +P+
Sbjct: 141 FFEGLGMAGDGSDGEILGGRVTAGEKKIARHRHSNSMDGSLTSSFEVDSSKK---AMAPD 200

Query: 181 KKKQ------KKEKKGEEEKEGRRRRKEKE 198
           K  +      K+ K+    ++   R KE++
Sbjct: 201 KLAELALMDPKRAKRILANRQSAARSKERK 227

[Close]

BLAST of Spg006376 vs. TAIR 10
Match: AT1G43700.1 (VIRE2-interacting protein 1 )

HSP 1 Score: 62.4 bits (150), Expect = 5.8e-10
Identity = 82/237 (34.60%), Postives = 109/237 (45.99%), Query Frame = 0


Query: 11  PQTAVRMDIELMPEAP-QRAYHHRRSHSDTSFRFANFEDLILFDPPDLDLSS-------- 70
           P   +  +IE MPEAP QR  HHRR+ S+T F   + +DL+LFDP D+D SS        
Sbjct: 8   PNQTILSEIEHMPEAPRQRISHHRRARSETFFSGESIDDLLLFDPSDIDFSSLDFLNAPP 67

Query: 71  ------SLPSLSPTGARVAVDSFNSKSPKDASASKPRAGNGNSASFGAHCGSFSMDSDFF 130
                   P  SP        S N   P ++   KP       A FG H  SFS+DSDFF
Sbjct: 68  PPQQSQQQPQASPMSVDSEETSSNGVVPPNSLPPKP------EARFGRHVRSFSVDSDFF 127

Query: 131 EGLGMAGDGSNGEILGGRVTVGEKKMGRHRH--SNSMDGSLTS-SFEAESTDEIDCSSSP 190
           + LG+  +           + GEKK G H H  SNSMDG ++S SF  ES   I  S S 
Sbjct: 128 DDLGVTEEKFIA------TSSGEKKKGNHHHSRSNSMDGEMSSASFNIES---ILASVSG 187

Query: 191 EKKKQKKEKKGEEEKEGRRRRKEKEKKNSVAVCRQRRRPATGAKKKEIRREEDGEEK 230
           +   +K    G +          K  K  +A     R+ A  +K+++IR   + E K
Sbjct: 188 KDSGKKNMGMGGDRLAELALLDPKRAKRILA----NRQSAARSKERKIRYTGELERK 225

The following BLAST results are available for this feature:

BLAST of Spg006376 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886256.1	9.4e-63	65.94	transcription factor VIP1-like [Benincasa hispida]	[more]
XP_023548041.1	2.1e-62	65.65	transcription factor VIP1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022990404.1	1.0e-61	65.22	transcription factor VIP1-like [Cucurbita maxima]	[more]
XP_022956511.1	1.8e-61	64.78	transcription factor VIP1-like [Cucurbita moschata]	[more]
XP_008441523.1	8.8e-61	65.50	PREDICTED: transcription factor VIP1-like [Cucumis melo] >KAA0054921.1 transcrip...	[more]

BLAST of Spg006376 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9MA75	8.1e-09	34.60	Transcription factor VIP1 OS=Arabidopsis thaliana OX=3702 GN=VIP1 PE=1 SV=1	[more]

BLAST of Spg006376 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JRY6	5.0e-62	65.22	transcription factor VIP1-like OS=Cucurbita maxima OX=3661 GN=LOC111487272 PE=4 ...	[more]
A0A6J1GWS4	8.6e-62	64.78	transcription factor VIP1-like OS=Cucurbita moschata OX=3662 GN=LOC111458227 PE=...	[more]
A0A5A7UMX9	4.3e-61	65.50	Transcription factor VIP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3B3P0	4.3e-61	65.50	transcription factor VIP1-like OS=Cucumis melo OX=3656 GN=LOC103485625 PE=4 SV=1	[more]
A0A0A0KBC6	4.0e-59	66.67	BZIP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G057150 PE=4 S...	[more]

BLAST of Spg006376 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G43700.1	5.8e-10	34.60	VIRE2-interacting protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..165
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 216..240
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 167..204
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..240
None	No IPR available	PANTHER	PTHR13690	TRANSCRIPTION FACTOR POSF21-RELATED	coord: 7..165
None	No IPR available	PANTHER	PTHR13690:SF86	BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED	coord: 7..165

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg006376.1	Spg006376.1	mRNA