Spg006349 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg006349
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold4: 5201974 .. 5204431 (+)
RNA-Seq ExpressionSpg006349
SyntenySpg006349
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGGCATTGGAGCTTTGTTGGAATGTTAGGTCCCTGTATAAGATTGGCCTTCTTAGTTGGAACAATACCAAAGTATGTTCTACTTGTTTCTGTCAATAAGATTGACTGATTTGATTTTCTTTTTCTTTTAAGCTCTAATTGATAAAAGTTGTTGACAATGACAGGTAGTCATCTATCAACGAGCTCAAGATTTTTCCATACATGGATGTGAGCTCAACTGGAGTGTTAGGACTCTTGATAAAGTTGACTTTCTTAGTTTTAACAATACCAAAGTATATATACATTTTACATTTTACATCTGTCAATTTAATTTCAATTTGATTTGTCTTTTCTTTTAAGCTCTAATTGATAAAAGTTGTTGAAATGACATGTAGGCAACTATTAACAAGCTAAAGATTTTTCCATACAGGAATGCAAGCTCAACTGGAGTGTTATAACAATCCCAAAGTATGTTATATTTTTTGTTCAGTAAAATTGATTGATTATATTTTCCTTTTCATTTAAGTTCTAATTGATAAAAGTTGTTTGACAATGATAGGTAGACATCTTTCAGCAAGCTCAAGATTTGTCCTATGCAGGCATTGGAGCTAGATTTGGAGGGTTAGGACTCTTAATAAGATTTCTTTTTGTTGGAACAATCCTGAAGTATATTATATTTTTTCCAACTTTCAATAAAATTGATCAATTTGATTTTCTTGTCTTTTTAAGTACTAATTGATAAATGTTGCTGACTATAATAGATGACGTCTTTCAATAAGTTCCAGATTGTTCTATATATAGGCATTGGAGCTCGATTTGGTGTATTTGGACTCTGGTAAGATTGACTTTGTTAGTTGAAACAATCTCAAAGTATATGATTTGATTTTCCTTGTCTTTTAAATTCTAATTGATAAAAGTTGCTAACTTTAATAGATAGGCATCTTTCAACAAGTTCAAGATTGTACATGTTGGATTGAGAGCTCGATTGGAGTGTTAGGTTTCTTGGTAAGGTTGACCTTTGAACAATCCCAAAGTATGTTATACTTTTATCTCTCAATAAAATAGATTGATTTGATTCCCCTTGTCTTTTGAGTTGTAATTGATAGAGGTTGTTGATAATGCCATGTAGACATCTTTCAAAAAGCTAAAGATTGTCCCATGCAAATATTGGAGCTCGTTTCGATTGTTAAGGACTCTTGATAAATCTGACCATCTTAGTTGGAGCAATCTTAAAGTATGTTTTATTTTTATCTTTCAATTACATTAACTGATTCTATTTTCCTTGTTTTTTAAGTTGTAATGATTGATAAAAGTTGCTAACAATGATAGGTAGACATCTGTAAATAAGCTTAAGATTGGTTCGTGTAGGCCGCATTGGAGCTCAATTGGTGTATTAGGGGACTCTGGTAAGATTGATTCTTAGTTGGAACAATACCAAAGTACATTATACGTTTTACATCTTTTAGTAAAACCAATTTATTCGACTTGCCATGTCTTTTAAGATCTAATTGATAAAAGTTGTTTCTTTCAGCAAGCTCAAGATTGTCAAGAATGAGAGCTCAATTGGAGTATTAGGACTCTAGTAAGATTGATCTTCATAGTTGGAACCATGCCAAATTATTTATACATTTTACATCATTCAATAAAATTGTTGATTTGATTTTTCCTTTTCTTTTTAAGTTCTAATTGATAAAAGTTGTTGACAATGATAGGTAGACATCTTTCAACAAGCTCAAGATTGTTTGTTCCATACATGCATTGGAGCTCCAGTGGAGTGTTAAGAGACCTTTTTAGTCGGAGCAATATGAAGGTATGTTATACAATACTTTTTCTTCATTAAAATTAGTCGATTATATTTTCCTTGTTTTTTATGTTCTAATAATTGATAAAAGTTGTTCATAAGACAAGAATACTAAACAATAACAAGAAGAGAAAATCGAACATCCCTACTAGTTTGAGTAGGATTGTAAGAAACCAAACCGGTTCAGTTCGGTTCGGTTTTGAAGAATATTATAGACAAGACCGAACCAATTCGGTTTGGTTCGGTTTGTCTTTTCCTGAACCGAGCAGCTTTACCCTAAATCGCACCTTTTCCTTCTGCCGTCTCCCTCTTCCTTAACAAGTGTTTCAGATCCTGCTCGTTTCGTTCCGCCGTCTCCCTCTTTCTCAACAACCATCACCGCTCGCTGTTAATATTGTTTTCCAGATTATTGAAACTGCAACATTTGGAGAGCGGCTTCCTCCTGGAAGCGGATGTCGATCTCTTGGAAGAATGGCGGATGGGGGCATTGAGGGAATGGTCCTTGAACTTGAAGCAAGTGGCGGACATGCAAGCGGCTACAAGCCAAGTACAGAGGGGAGATGCAATAACAAAGGCAGCCATGGAAGGAACAAGAACAAGAACAAGAATAAAAACAACAACGACAAGAAGAAGAAGAAGAAGAGATGGTTACAGAGGTGGTGGCGTTGGGAGTGA

mRNA sequence

ATGCATTGGAGCTCCAGTGGAGTGTTAAGAGACCTTTTTAGTCGGAGCAATATGAAGATCCTGCTCGTTTCGTTCCGCCGTCTCCCTCTTTCTCAACAACCATCACCGCTCGCTGTTAATATTGTTTTCCAGATTATTGAAACTGCAACATTTGGAGAGCGGCTTCCTCCTGGAAGCGGATGTCGATCTCTTGGAAGAATGGCGGATGGGGGCATTGAGGGAATGGTCCTTGAACTTGAAGCAAGTGGCGGACATGCAAGCGGCTACAAGCCAAGTACAGAGGGGAGATGCAATAACAAAGGCAGCCATGGAAGGAACAAGAACAAGAACAAGAATAAAAACAACAACGACAAGAAGAAGAAGAAGAAGAGATGGTTACAGAGGTGGTGGCGTTGGGAGTGA

Coding sequence (CDS)

ATGCATTGGAGCTCCAGTGGAGTGTTAAGAGACCTTTTTAGTCGGAGCAATATGAAGATCCTGCTCGTTTCGTTCCGCCGTCTCCCTCTTTCTCAACAACCATCACCGCTCGCTGTTAATATTGTTTTCCAGATTATTGAAACTGCAACATTTGGAGAGCGGCTTCCTCCTGGAAGCGGATGTCGATCTCTTGGAAGAATGGCGGATGGGGGCATTGAGGGAATGGTCCTTGAACTTGAAGCAAGTGGCGGACATGCAAGCGGCTACAAGCCAAGTACAGAGGGGAGATGCAATAACAAAGGCAGCCATGGAAGGAACAAGAACAAGAACAAGAATAAAAACAACAACGACAAGAAGAAGAAGAAGAAGAGATGGTTACAGAGGTGGTGGCGTTGGGAGTGA

Protein sequence

MHWSSSGVLRDLFSRSNMKILLVSFRRLPLSQQPSPLAVNIVFQIIETATFGERLPPGSGCRSLGRMADGGIEGMVLELEASGGHASGYKPSTEGRCNNKGSHGRNKNKNKNKNNNDKKKKKKRWLQRWWRWE
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..133
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 83..133

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg006349.1Spg006349.1mRNA