Spg006286 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg006286
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	transmembrane protein 256 homolog
Location	scaffold4: 4691414 .. 4700391 (-)
RNA-Seq Expression	Spg006286
Synteny	Spg006286

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTACAACATTACACTAATTTTTTTTCTCTTCCTAATTTTTCCGACCGGCGATCGAGGGCCTCCATCTCCAAATTCCTCGCCGCCACATCTTCGGAGCCAGAGCCGGCTCCGGCCCGGATCTAATTCTTCCATGTCCGACCTTCAGATTTCCCCAATTTTATGAACCCTAATTTACTCTTCTGTGCACTTCCAGTTACATTTTCCCCTCTTTTTTTTTTGAAAAAAGGGGAACCTAATTTTTAGGGGAATTTCTTCTGTTTTCGCGGGAGCAAGTTCGTTTTAGTGGGCTAGTGCCTCTGGTACAGTGAGATTTGCCCACAGCTGAGCTTAATTTTGCTCGATGTTCTAAGTACACGTGGCGATCTGGATAGTTACCACCTCCATTTTCTTGCTCGGATTTCAGTGAGCTTTTTTTAGGTATTTGCTTTTTTGGCTTTGGTTTTTTTCTTTTAATTTTAAGTGGTATAAAGTATTTGTAGCGTATGGATTTTGTACATGTGCTGTTGGTGTTTTGAATGTGTGTTTTTTTTTTTTGGGTGTGAATTGAGGAAACTCGGGGGTTGATTTGAAAATTGAGCTGAATTTTGTGCGCTCGAGTGGGTATGGATTTGTTGCGAAATGGGGTTTCTGGGTTTGGTGTGAAGTGTTTGAATGTTGAGAAAACTGAAGATTTTGATGGGATGTTGAGATTTTTAGTTGCGGCTGTACTCTGGTTACTGAGAAATGAAAATGTCGATGTTGTCGAATTGTTTGAGATTGGGACTGGTTGATTCTTTTACTTCAAAGATCGAGATTCTCGAGGCTTTGATTTTTAATTTTTTTTTCCAGTTTACTGTAGCTTGGTGATAAATTATGCATGAATTTCCAGTTCAAGATCTCGTCTTTTGTTTTCCTTTCTTCTCGTTTAGTTGCCATAATGAGAATTTTCGACTCGATTGACTCTGAGATTTTACCTTTTCTTTGCGTTGAAAAAAAAAAAACTCTGCAGGAATTGTTCGCTTTCTCAAGCTATATTCCCGTGGAACGTTGACATTTGTGCCAATTATTAGGGAACGTGGAAATGTGGATATGTTTGAGAATGTGGCTTCATGAGCTGTTAAGAACAACTCACTGGTCGTAGTTTTTTATCTCTGAGTTTTTGGTCTTTCACTGATTTAGATTTGTAAATGGAAGTAAACAAAGAGGAGGCCTTTAAAGCAAAAGAGGTCGCTGAGAAGCGTTTTGCCAAGCGAGACTTCAATGGCGCAAAGAATTATGCATTGAAGGCCAAAACTTTGTTCCCAGAGATGGATGGGATATCTCAAATGGTGGCAACTTTTGATGTTTATGTTGCTTCTGAGATTAAGTGCAATGGCGAGGTGGATTATTATTCTATTCTAGGATTGAAGCCTTCTGCAAACAAAGAGGCTATAAAGAAACAGTACAAGAAAATGGCTGTGTTGCTCCATCCTGACAAGAATAAGACTGTCGGGGCCGATGGAGCGTTTAAGCTTGTTTCTGAAGCATGGGCTCTACTTTCAGATAATTCCAAGAGAAATGCATATGATATTAAGAGAACCACACAATTGGCATCTGCAGTCAACCAGCCAAACTTATCTTCAGCTCATGCTTCTGCGGCTACAAGTTTTAACAACTATACCAATCTGTCCATGTCCCACGGTAGACTTGATACCTTTTGGACTGTTTGCACCTCCTGTAAAGTTCAGTATGAGTATCTCCGGAAATACGTGAACAAGAAACTTCGGTGCAAGAATTGCCGCGGCGTTTTCATTGCCGTGGAAACTGGGGCTGCCCCAGTGAATGGTTCTTTCCCTTACTGCTCCTGGTCAAATGTTGCTGGTAATCGGTATGGAAGTCATGGATTTGAGGGTGTTACGTATATCCCAGGAGATACTAGCTTTTTTACTGGACATGGTTATGAGTATGTTTCAAATGTCTCATTTCAGTGGAATTCATCATCTGGAGTTTACACTCAAACCTTGGGCCCGAATGGACCATCTTCGGTACCTGTCGATAATGTTGGCCAAACAAATGGACATTTCAGTACATCAGGAGTGAAGGATAAGACAAGAGTCAATGGGAAGCGTTCTATGAAAAACAAGGTGGTTCATATGAATGCAAATGCACCCTCTGTCTGTAACGAGATTCTGGGATCAGATAGCAATGGAGCTGATAAGAGAAGGAAGGTTGTCGCAGAAGCCAGTTTGAGAAACGGATATGTGGAGAAGGGACCACTGCCTGCTTCAGATTCAGGATTAGCTAATGGTAATGCTACTGTTAAGCATGAGCCCGTAGCTTCTTCCACTCCAACCGAGCTTTCAGCTAAGCGCATCCCTGTTCCTCCTGCATTTGACCCCAGAAAGCTGTTAATTGAGAAGGCAAGGACTGTAATTCGCAAGAAGTTGGAAGAGATAAGGATTTCTTCAGCCAATTCTGCTGCTCATGAGAAATCAAAGACGGAGTCTCAAGTTGGATTGGTTGGAAAGACTGGACGGGCACCTAAAACTACCAATTCTGATGTATCCGGCCGCTGGTTAGACAAGGATAGAGCTGGACCAATCTCAATAAATGTACCTGATTCTGACTTCCACGATTTTGACAAAGATCGATCAGAGGAATGCTTCAAGGCAAAGCAAATATGGGCTCTGTACGATGAAGAAGATGGTATGCCTCGCTTGTACTGTCTGATTCGCGAGATCATCTCAGTTAAACCATTTAAGATTCATATAAGTTATTTAAACTCCAAAACTGACACCGAATTTGGGTCAGTCAACTGGTTGGAATATGGGTTTACAAAATCCTGTGGAAATTTCCGTGCTTGGCACTCTGATGTCATTGAACATATCAACATCTTCTCTCATGTCTTAAGCCGCGAAAAAGCCGGTAGGGGAGGCTGCGTTCGGATATATCCAAGAAGTGGAGACATTTGGGCTGTTTATCGAAACTGGTCTACAAACTGGGACAGATCAACCCCTGATGAAGTGAGGCACCGATATGAAATGGTGGAGGTTCTTGATGATTACTCTGAAGACTTTGGTGTCTGCATCTGCCCCCTTGTGAAACTAACTGGATTCAAGACAGTTTATCAAAGAAATGCAGACAAAGATGCCATTCGTTGGATTCCCAGGAAAGAGATGCTACGGTTTTCACACCAGGTACCCTCTTATTTACTGAAGGGAGAAGCAAGTAACTTGCCTGAACATTGTTGGGATCTCGATCCGGCTGCCACTCCGGACGAACTGCTCCACACTGCGACAGAAAATGAAGGGTTGACTGAAACCCAGTTGAGTTAAGCAGGAGAATTAAAGAAGATGATGATAATGGGTCAGAGTCAATGTGAGCAGTCTTAACCAAAGTTAGGTCTAACTGTACAAATATGTCTCATGAGTTTGGCCAAATGCCATTACAGACAAGACGAGAAATCTACAGTTGATTTGGATAATGTCTGCTGAGTCGCTTCTATGACAGACGAATTTAGCTTCAAGTAAATGCTTTTACAGATGAAGAAACTACCTCTATCTGGACGTATCTTGAAAGGAGCACTTGAAAATTTTCGTTGGCAAGCAACTTTGAGGCTTATTATCCATCACTGCAGCACAACAATACAAATTATTATGCTACGTTCCCTTCCTCGTTAATCAGAAGAGCTTTGTTTTTCTTTTTTTCCTCCTTTTTCCAGATTAGTTTCTCTTACTTTGTTCTAATGGAAATGAACGAGAACTTGGCTGTTTAATCTCTTGATTTTGTTGTAAAATTTGAAGCTTCAATGCTTTGAGGCCTCATTTCATACGACAAACTACTGTTCATCTGATTCCCCAGCTGCTTCATGATTCTCATTCACATATCTGAAAACACCGACTTCTAAAAGTCGGGATTAGATTAAATTTACCGTAATCCATTAACATTCAAGAGTAGAAAACAACTATAGTATCAACTATCAAGTGATGAAATATTGGTCTCTTTGTAATCTATCAACACATTCGTTTATGCCATAACTCGAATCTCCTGTCGCTTTAGCTCCCATGCTTTCATCATAATGCTTTTCCCTATAGTTTTTTTTGGCTGCTAAAGTACCATTCTTTCCATTCATTGCACAGCCAAGCCGCAGTTTTGATGAAGAAAAGTCAACTGGTTGACCAATCCAATGAACAGAGCCAGTCAAGTCTTCAGGTTCTGCAGATAAATGAAAAGCAATCAAATCAAAAACCAGCACAAGGAAACCCTTTTTCTTTTTCTTTTCATTTGTCTTCTCTTTTTGGGCCGATATGTCGGCTGTGGACGAGAGAGAGCGACAGGTCGTTCTAACTTCAAACAAAGGTCATCATTTGGGAATTAAAAAAGAAAAACCTTCACAAAAACCCGCCTCGAAAACAAAGCCAATCAAACCCAGAGAGCGAAGATCGAGATGAACCCACTTCACTGGCACAAAGTCGCTGCGATTTCTGGTAATTTCTCTCTCGATTCTCGTGTTCTAGCTCCGCGGATTTTAATTCGATTGTGATTTGATTTCGGCTTCAAACAGGCGTTGCAGCTCTTGGATTGGGTACGTACGGCGCCCATGTCTTCAAACCCCAAAACCCAGCTTATAAAGAGGTTGATTTACTCGATCTTTCGCTTCTTTGATTTGATTCCTTCGATTTGATTTTGATTGTTGTTTCTGGAATATCAATTTTCTGAAGGTTTGGCAAACGGCAGCTCTGTATCATTTGGTTCACACAGCGGCTCTGCTTGCTGCCCCTTCGACCAAGAACCCTAACATTGTAAGTTTTCCCCCCTTTTCATTCCTCGACTTTGTAGCAGACTCGTTCTTGGACGTAAATTTCTCCTTATGATCATTTTGGGCAGAGCATATTGATATACCAAACGATTGAACACACCCTAACCTAGAAGTTTTAAGCCCTAAATCTGAAAATTTGCTGGTACAGTGGGGATTTAACATAATATTGAACACATTCGTCTTCTTACTTATTGATATAAATAGTTCGCATGAATTCAATTAATATGTGAGCCCATAATTGACAAGAATGTTGAATTTGTATAAAAGTAGATAGCTTAAAGTTTTAGGTTTTGAGTTTGGCAGTGATTTAATAGCTATTAATATTTAGGGTTTTTTTTTAGTTCATCAACTTTTGGGTGGGGGATTTGAACAACTCACCCCTTGGTCGAGGGTAAATGTCAATTACCGTTTAGCTATGCTGGCTTTGACGATTAATATTTAGGTTTAATTACAAATCCAAACATAATTTAGATTAAATATTTCAACATCAATGTTGAGACTTGAGAAGATAATTATAATGAAAATGTATGACTATCACATATTCATAAATATAAAGTTACCCATTTATTTCTCAAAAAAAAAAAAAAAAAAAGTTACCCATTTAAAATTTCCTTAATATCTAAAGTCCGTTTGACAATAATTTTTTTTAGTTGTGTGTTTTTTGAAAATTGGGCATGTTTCCTCCCCTTTCTTTAGAATGGTTTTCATCTTTAAGAGAGATTTGAATTCAAAACCACTGTCGTTTTGTTTCTTCAAAATTTGACTTGGATTTTGTAAACATTTGTAAAAAGTAAATAACAAATCAAAGAAACTTATATGTAGAAGTAGTGTTCGTAAGCATAATTTTCAAAAACAAAAAACTAATTGGTTATCAAACGGACCTTAAGTTATTTATTATATGGACTTCTTAATATTGAAGCTGGATAATTAGATTTGTGTTTTTTATTTTTTTTTTGAAGCATAATTAGATTTGTGTTTTTGTTGCCTATACATGAGTCTTTTAATGCCTATCATTATGTTTCTCTTCTGGCAGTTTGGAGGCCTTTTGACTGCTGGAATTCTTGCATTTTCGGGCACGTAAGGCCAATATTTATTTTCATTTTTCTTTTAAAAGTTTGTTTGGATTTCTCTCTTTCATTTCTATTTGATATTAGCATCCAATGTGTCTAAGCTAGCTAAGATCAGTGTTTTAAAAGGCTCAAGGCGCACTAAGGCGCAATGGCTGCCTGGGGCCTAGGCTCAAGGCGCACAAAAAGGCGCGGGCTTTATTATGCAAGGCGCACTATATAGAAAAAAAATTAAAAAAAAATATATACATGTATATAAAACACTTTCATGGGAAGTAATGAAGTTTTTAATCAAGAAAAATAGATAAAAGATTAACAATATTCAAATAGCAGACTTCAAACATCGAGTTGAGTCAAATGTCAATACTGCACAAAAATTAAAAAACAAACAAACAATACAATACAACACTAATCAACAATAAAAATCTAAAGTCCTAAAGATCAAACTCATCATCACTAAATTGATCTTCGTCCTCATTCTCTCCATCATTGGACTTATAGCCTTCTGTATCTTCTTCTTCTTCAGTCTCAGAGTCATCCAAATTTACTGTTGTGCGTGTGGGTCGGGGTCGTGTGGAGGATGAACATGGAGCATGAGCTTTAGTCTTGGTTCTTGAGGCATTAGCCCTAGAATAATAGAGAGGTTCTTTTGCCCCAGCAGCTCTTGAAACATCGCCCCATGTCAATGAATCGTCATCGAATACAAGATCATCATCCTCTTCAGAATCATCATCCATTCTTCCCATCAACCACTCATTACTATCATCAATATCTTTTAAAGAGATTGGGTCGATGATATCCCTAATGTTATATCGACGTTTCAATGCTCTATTATATTTTATGAACACCAAATCATTCAGACGACTTTGAGCAAGTCTATTCCTTTTCTTGCTATGAAGCTGCAAGTATAAATAAAAAAAGTTCCATGACAATTCAAACCAAGAACTTAAAACTTAATTCTTAAGATACTTGAGGAGAAAATAACTAACCTGTTCAAAAACACTCCAATTACGTTCGCACCCCGAAGCACTACAAGTAAGACCTAAAATTCTAACGGCAAACCTTTGCAAGTTTGGAGTTGATTGTCCGAAATCATCCCACCATTCCACTAAAGACCAAAATTATGTTAATAGCTTCCAATTCAAGTAAATAATTTAGTGTTTTAACTTTTATCAAATATAAAATATTCAAATTCAAAATTTACCTGGAGATCTTTTGTCTCTTTGTCTAAGTGCCAAAGGTGATCCAAATAATCCTTCGGCTTTCTTGTACTTGGTCAGTTCCTCAAGTATCTTGTCTTGTACCTCCAAAGAAGGAACCATTTTTGTTATACATGAGTATAACCCGTTAACAATTTCATCATCAGCTTGAATGTTGGGATTTGAATAATAGAATTCTGGGTTTAAATAATAACCCGCTGCATGCAAAGGACGATGCAACTGAAGCTCCCATCTTTGATCAATGATCTTAAAAATATCTTTGTATTTCTCTTCCTTTCCATTAAAGGATTTAGCTATGGCCTCCTTAGCTCTATCCATGGCCTCATAAATATATCCCATAGGAGGCTTCTTCTCACCATCCACCAACCTAAGAACTCGTACTAGAGGGCCCGAGACTTTAAGAGCAAACACAATTGTATTCCAAAAATTGGCCATCAAAATAGTTTGAACAACTCGCTTGCCTTGTTGCTCCTTACTCCATTTGCTATTCTTCCATTCATCTGAAGTAAACATCTTTCTTAAGTTGTTCTTTTGACGATGTATACTTGATAGTGTGATGCAAGCTGTAGCAAAGCGAGTCTTAGCTGGTCTAACCAACTCTTTCTGATCAGTAAACCTTCTCATCATATTTAACAATCCAGGACGAACATAAATGAAGTTGCTAATCTCCATGCCTCGTTTAAGTGTTTTGCGAATATTTGGTATCTTGTATATATCCTCCAACATCAAGTCCAAGCAATGAGCGGCACACGGCGACCAAACTAAATATGGTCGTTTTGCTTCTAACAATCTCCCTAGAAAAAGGTAAAGAAGGAAAGTATTAGGCAACTCAGTATGTCGTAAGACTTACAACTTAAGAGTAAGAAAATGAGCTAGTATTTTAAATTCTTACGTACCTGCCATCACATTTGCTGAGGCACTATCAGTAACAACTTGTACAACATTGGCTTCTCCAATGCGCTCTACAAAATTGTCGAGTAGTTCAAACATTTTCTTCCCATCCTTCACATAAGACGAGACATCAATGGACTCAATAAACATAGTGCCTTTTGGACTATTAACTAAGAAGTTGAGTAATGTCCTATTTCTTCTATCTGTCCATCCATCAGTCATGATGGTGCATCCAACCTTGACCCATTCTTCTTTATTTCCCTTCATCAACTCATTTGTGGTTTCCAACTCTTTTTTTAAACAAGGCACCCTCAATTCATGATAAGTTGGTGGTTTCAATCCAGGACCGAATTGTCCTATTGCTTCAATCATGGGTGCAAAGCTTTCATAATTGCAAGCATTTAAAGGTATCCCAGCATCATAAAACCATCGAGCCATTCTTTGGATGGTGTGCCCCCTCATCTCCTTTTTGTAGGCTTCATTCAACGTTGTTTGCTTTCCTTTCTCGTTCTTTCGATTTTGAACAACAGTTTCTGGATTAGGAGTAAAATATGCATCTATAGGACCCTTTTGTTTTGGACCTTTTTGTTTCTTAAAAGAAGACTTAATTGATTCCCAACTTACTCTTTGAGAGTTTGCACTTGACGTTCTCTTACCCGAATGAGTTACTAACACATCTTCTTCATCCTCATCATCAATACCATAACTTTCAGCATCAATGTCTATGTCCGGAATCAAATTTCGTTGATCTTTGATTTCCTTCTTCTTCAACATATATGCTTTAATTTCCTCCTTGACATGATCGGGACATTTTCTACATGCTGTGGCATTTCTATAACCACCAACAAGGTGTTGCTTCATTCTATAAACCCCTCCTTTTGTTATTTTTGAACAAAAACTACATACTAATGAATTTATATCTTCGGCATTCTCCAATCGAGCATACTTCCATGCTGGATCTGTTCTTAAACTATTCTCAGCCATCTATGATCTACCAATTAAGAGAGAATGAAGAGAATAAA

mRNA sequence

ATGAACCCACTTCACTGGCACAAAGTCGCTGCGATTTCTGGCGTTGCAGCTCTTGGATTGGGTACGTACGGCGCCCATGTCTTCAAACCCCAAAACCCAGCTTATAAAGAGGTTTGGCAAACGGCAGCTCTGTATCATTTGGTTCACACAGCGGCTCTGCTTGCTGCCCCTTCGACCAAGAACCCTAACATTTTTGGAGGCCTTTTGACTGCTGGAATTCTTGCATTTTCGGGCACGTAA

Coding sequence (CDS)

ATGAACCCACTTCACTGGCACAAAGTCGCTGCGATTTCTGGCGTTGCAGCTCTTGGATTGGGTACGTACGGCGCCCATGTCTTCAAACCCCAAAACCCAGCTTATAAAGAGGTTTGGCAAACGGCAGCTCTGTATCATTTGGTTCACACAGCGGCTCTGCTTGCTGCCCCTTCGACCAAGAACCCTAACATTTTTGGAGGCCTTTTGACTGCTGGAATTCTTGCATTTTCGGGCACGTAA

Protein sequence

MNPLHWHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTAALYHLVHTAALLAAPSTKNPNIFGGLLTAGILAFSGT

Homology

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BLAST of Spg006286 vs. NCBI nr
Match: XP_022969303.1 (transmembrane protein 256 homolog [Cucurbita maxima])

HSP 1 Score: 164.5 bits (415), Expect = 3.8e-37
Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 0


Query: 1  MNPLHWHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTAALYHLVHTAALLAAPSTK 60
          MNPLHWHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTA+LYHLVHTAALLAAPSTK
Sbjct: 1  MNPLHWHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 60

Query: 61 NPNIFGGLLTAGILAFSGT 80
          NPNIFGGLLTAGILAFSGT
Sbjct: 61 NPNIFGGLLTAGILAFSGT 79

[Close]

BLAST of Spg006286 vs. NCBI nr
Match: XP_023554646.1 (transmembrane protein 256 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 163.3 bits (412), Expect = 8.5e-37
Identity = 77/79 (97.47%), Postives = 79/79 (100.00%), Query Frame = 0


Query: 1  MNPLHWHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTAALYHLVHTAALLAAPSTK 60
          MNPLHWHKVAAISGV+ALGLGTYGAHVFKPQNPAYKEVWQTA+LYHLVHTAALLAAPSTK
Sbjct: 1  MNPLHWHKVAAISGVSALGLGTYGAHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 60

Query: 61 NPNIFGGLLTAGILAFSGT 80
          NPNIFGGLLTAGILAFSGT
Sbjct: 61 NPNIFGGLLTAGILAFSGT 79

[Close]

BLAST of Spg006286 vs. NCBI nr
Match: XP_022953076.1 (transmembrane protein 256 homolog [Cucurbita moschata] >KAG7011866.1 hypothetical protein SDJN02_26773 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 161.8 bits (408), Expect = 2.5e-36
Identity = 76/79 (96.20%), Postives = 78/79 (98.73%), Query Frame = 0


Query: 1  MNPLHWHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTAALYHLVHTAALLAAPSTK 60
          MNPLHWHKVA ISGVAALGLGTYG+HVFKPQNPAYKEVWQTA+LYHLVHTAALLAAPSTK
Sbjct: 1  MNPLHWHKVAGISGVAALGLGTYGSHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 60

Query: 61 NPNIFGGLLTAGILAFSGT 80
          NPNIFGGLLTAGILAFSGT
Sbjct: 61 NPNIFGGLLTAGILAFSGT 79

[Close]

BLAST of Spg006286 vs. NCBI nr
Match: KAG6572230.1 (hypothetical protein SDJN03_28958, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 161.4 bits (407), Expect = 3.2e-36
Identity = 76/79 (96.20%), Postives = 77/79 (97.47%), Query Frame = 0


Query: 1   MNPLHWHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTAALYHLVHTAALLAAPSTK 60
           MNPLHWHKVA ISG AALGLGTYGAHVFKPQNPAYKEVWQTA+LYHLVHTAALLAAPSTK
Sbjct: 57  MNPLHWHKVAGISGAAALGLGTYGAHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 116

Query: 61  NPNIFGGLLTAGILAFSGT 80
           NPNIFGGLLTAGILAFSGT
Sbjct: 117 NPNIFGGLLTAGILAFSGT 135

[Close]

BLAST of Spg006286 vs. NCBI nr
Match: XP_022135760.1 (transmembrane protein 256 homolog [Momordica charantia])

HSP 1 Score: 158.7 bits (400), Expect = 2.1e-35
Identity = 76/79 (96.20%), Postives = 77/79 (97.47%), Query Frame = 0


Query: 1  MNPLHWHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTAALYHLVHTAALLAAPSTK 60
          MNPL WHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTA+LYHLVHTAALL APSTK
Sbjct: 1  MNPLLWHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTASLYHLVHTAALLVAPSTK 60

Query: 61 NPNIFGGLLTAGILAFSGT 80
          NPNIFGGLLTAGILAFSGT
Sbjct: 61 NPNIFGGLLTAGILAFSGT 79

[Close]

BLAST of Spg006286 vs. ExPASy Swiss-Prot
Match: A4K526 (Transmembrane protein 256 homolog OS=Bufo gargarizans OX=30331 PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 4.9e-11
Identity = 33/76 (43.42%), Postives = 49/76 (64.47%), Query Frame = 0


Query: 6  WHKVAAISGVAALGLGTYGAHVFK--PQNPAYKEVWQTAALYHLVHTAALLAAPSTKNPN 65
          W ++ A+SG  A+  G YGAH F+   ++   KE+++T   YH +H+ ALLA P  + P 
Sbjct: 7  WGRLGAVSGALAVTAGAYGAHGFRRSDRDEYLKELFETGNRYHFLHSLALLAVPHCRRPL 66

Query: 66 IFGGLLTAGILAFSGT 80
          + G LLT+GI+ FSGT
Sbjct: 67 LAGSLLTSGIVLFSGT 82

[Close]

BLAST of Spg006286 vs. ExPASy Swiss-Prot
Match: Q568J8 (Transmembrane protein 256 OS=Danio rerio OX=7955 GN=tmem256 PE=3 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 3.6e-06
Identity = 28/73 (38.36%), Postives = 40/73 (54.79%), Query Frame = 0


Query: 8  KVAAISGVAALGLGTYGAHVFKPQNPA--YKEVWQTAALYHLVHTAALLAAPSTKNPNIF 67
          +VA ISG  A+  G YGAH F+    +   +E++ TA  YH  H+ ALL A   + P + 
Sbjct: 9  RVAGISGALAVAAGAYGAHGFRRSEASDYQRELFDTANKYHFYHSLALLGAARCRKPALA 68

Query: 68 GGLLTAGILAFSG 79
          G +L  G+  F G
Sbjct: 69 GVILLTGMGCFCG 81

[Close]

BLAST of Spg006286 vs. ExPASy Swiss-Prot
Match: Q5F285 (Transmembrane protein 256 OS=Mus musculus OX=10090 GN=Tmem256 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 4.7e-06
Identity = 27/71 (38.03%), Postives = 41/71 (57.75%), Query Frame = 0


Query: 6  WHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTAALYHLVHTAALLAAPSTKNPNIF 65
          + ++ A+SG  ALGL +YGAH  +  +   KE++  A  +H +H+ ALL  PS + P   
Sbjct: 8  FRRLGALSGAGALGLASYGAHGAQFPDAYGKELFDKANKHHFLHSLALLGVPSCRKPVWA 67

Query: 66 GGLLTAGILAF 77
          G LL +G   F
Sbjct: 68 GLLLASGTTLF 78

[Close]

BLAST of Spg006286 vs. ExPASy Swiss-Prot
Match: Q8N2U0 (Transmembrane protein 256 OS=Homo sapiens OX=9606 GN=TMEM256 PE=3 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 1.4e-05
Identity = 28/74 (37.84%), Postives = 42/74 (56.76%), Query Frame = 0


Query: 6  WHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTAALYHLVHTAALLAAPSTKNPNIF 65
          + ++ A+SG AALG  +YGAH  +  +   KE++  A  +H +H+ ALL  P  + P   
Sbjct: 8  FRRLGALSGAAALGFASYGAHGAQFPDAYGKELFDKANKHHFLHSLALLGVPHCRKP--- 67

Query: 66 GGLLTAGILAFSGT 80
             L AG+L  SGT
Sbjct: 68 ---LWAGLLLASGT 75

[Close]

BLAST of Spg006286 vs. ExPASy Swiss-Prot
Match: Q2KI29 (Transmembrane protein 256 OS=Bos taurus OX=9913 GN=TMEM256 PE=3 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 1.8e-05
Identity = 27/74 (36.49%), Postives = 41/74 (55.41%), Query Frame = 0


Query: 6  WHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTAALYHLVHTAALLAAPSTKNPNIF 65
          + ++ A+SG  ALGL +YGAH  +  +   KE++     +H +H+ ALLA P  + P   
Sbjct: 8  FRRLGALSGAGALGLASYGAHGAQFPDAYGKELFDKTNKHHFLHSLALLAVPLCRKPLWA 67

Query: 66 GGLLTAGILAFSGT 80
          G LL +G   F  T
Sbjct: 68 GLLLASGTTLFCTT 81

[Close]

BLAST of Spg006286 vs. ExPASy TrEMBL
Match: A0A6J1I0K9 (transmembrane protein 256 homolog OS=Cucurbita maxima OX=3661 GN=LOC111468350 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.8e-37
Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 0


Query: 1  MNPLHWHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTAALYHLVHTAALLAAPSTK 60
          MNPLHWHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTA+LYHLVHTAALLAAPSTK
Sbjct: 1  MNPLHWHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 60

Query: 61 NPNIFGGLLTAGILAFSGT 80
          NPNIFGGLLTAGILAFSGT
Sbjct: 61 NPNIFGGLLTAGILAFSGT 79

[Close]

BLAST of Spg006286 vs. ExPASy TrEMBL
Match: A0A6J1GM00 (transmembrane protein 256 homolog OS=Cucurbita moschata OX=3662 GN=LOC111455589 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.2e-36
Identity = 76/79 (96.20%), Postives = 78/79 (98.73%), Query Frame = 0


Query: 1  MNPLHWHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTAALYHLVHTAALLAAPSTK 60
          MNPLHWHKVA ISGVAALGLGTYG+HVFKPQNPAYKEVWQTA+LYHLVHTAALLAAPSTK
Sbjct: 1  MNPLHWHKVAGISGVAALGLGTYGSHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 60

Query: 61 NPNIFGGLLTAGILAFSGT 80
          NPNIFGGLLTAGILAFSGT
Sbjct: 61 NPNIFGGLLTAGILAFSGT 79

[Close]

BLAST of Spg006286 vs. ExPASy TrEMBL
Match: A0A6J1C1Y8 (transmembrane protein 256 homolog OS=Momordica charantia OX=3673 GN=LOC111007644 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.0e-35
Identity = 76/79 (96.20%), Postives = 77/79 (97.47%), Query Frame = 0


Query: 1  MNPLHWHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTAALYHLVHTAALLAAPSTK 60
          MNPL WHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTA+LYHLVHTAALL APSTK
Sbjct: 1  MNPLLWHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTASLYHLVHTAALLVAPSTK 60

Query: 61 NPNIFGGLLTAGILAFSGT 80
          NPNIFGGLLTAGILAFSGT
Sbjct: 61 NPNIFGGLLTAGILAFSGT 79

[Close]

BLAST of Spg006286 vs. ExPASy TrEMBL
Match: A0A0A0K1T6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G032280 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.7e-35
Identity = 75/79 (94.94%), Postives = 78/79 (98.73%), Query Frame = 0


Query: 1  MNPLHWHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTAALYHLVHTAALLAAPSTK 60
          MNPL+WHKVAAISGVAALGLGTYGAH FKP+NPAYKEVWQTA+LYHLVHTAALLAAPSTK
Sbjct: 1  MNPLYWHKVAAISGVAALGLGTYGAHGFKPKNPAYKEVWQTASLYHLVHTAALLAAPSTK 60

Query: 61 NPNIFGGLLTAGILAFSGT 80
          NPNIFGGLLTAGILAFSGT
Sbjct: 61 NPNIFGGLLTAGILAFSGT 79

[Close]

BLAST of Spg006286 vs. ExPASy TrEMBL
Match: A0A1S3CG60 (transmembrane protein 256 homolog OS=Cucumis melo OX=3656 GN=LOC103500518 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.7e-35
Identity = 75/79 (94.94%), Postives = 78/79 (98.73%), Query Frame = 0


Query: 1   MNPLHWHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTAALYHLVHTAALLAAPSTK 60
           MNPL+WHKVAAISGVAALGLGTYGAH FKP+NPAYKEVWQTA+LYHLVHTAALLAAPSTK
Sbjct: 46  MNPLYWHKVAAISGVAALGLGTYGAHGFKPKNPAYKEVWQTASLYHLVHTAALLAAPSTK 105

Query: 61  NPNIFGGLLTAGILAFSGT 80
           NPNIFGGLLTAGILAFSGT
Sbjct: 106 NPNIFGGLLTAGILAFSGT 124

[Close]

BLAST of Spg006286 vs. TAIR 10
Match: AT2G04900.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF423 (InterPro:IPR006696); Has 1824 Blast hits to 1824 proteins in 878 species: Archae - 0; Bacteria - 1498; Metazoa - 118; Fungi - 14; Plants - 58; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink). )

HSP 1 Score: 145.2 bits (365), Expect = 2.2e-35
Identity = 67/79 (84.81%), Postives = 76/79 (96.20%), Query Frame = 0


Query: 1  MNPLHWHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTAALYHLVHTAALLAAPSTK 60
          M+P  WHKVAAISG+AALGLGTYGAHVFKP+NP+YK+VWQTA+LYHLVHTAAL++APSTK
Sbjct: 18 MDPRMWHKVAAISGMAALGLGTYGAHVFKPENPSYKQVWQTASLYHLVHTAALVSAPSTK 77

Query: 61 NPNIFGGLLTAGILAFSGT 80
           PNIFGGLLTAGI+AFSGT
Sbjct: 78 YPNIFGGLLTAGIVAFSGT 96

[Close]

BLAST of Spg006286 vs. TAIR 10
Match: AT2G04900.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF423 (InterPro:IPR006696); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 143.3 bits (360), Expect = 8.5e-35
Identity = 66/78 (84.62%), Postives = 75/78 (96.15%), Query Frame = 0


Query: 1  MNPLHWHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTAALYHLVHTAALLAAPSTK 60
          M+P  WHKVAAISG+AALGLGTYGAHVFKP+NP+YK+VWQTA+LYHLVHTAAL++APSTK
Sbjct: 18 MDPRMWHKVAAISGMAALGLGTYGAHVFKPENPSYKQVWQTASLYHLVHTAALVSAPSTK 77

Query: 61 NPNIFGGLLTAGILAFSG 79
           PNIFGGLLTAGI+AFSG
Sbjct: 78 YPNIFGGLLTAGIVAFSG 95

The following BLAST results are available for this feature:

BLAST of Spg006286 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022969303.1	3.8e-37	98.73	transmembrane protein 256 homolog [Cucurbita maxima]	[more]
XP_023554646.1	8.5e-37	97.47	transmembrane protein 256 homolog [Cucurbita pepo subsp. pepo]	[more]
XP_022953076.1	2.5e-36	96.20	transmembrane protein 256 homolog [Cucurbita moschata] >KAG7011866.1 hypothetica...	[more]
KAG6572230.1	3.2e-36	96.20	hypothetical protein SDJN03_28958, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022135760.1	2.1e-35	96.20	transmembrane protein 256 homolog [Momordica charantia]	[more]

BLAST of Spg006286 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A4K526	4.9e-11	43.42	Transmembrane protein 256 homolog OS=Bufo gargarizans OX=30331 PE=3 SV=1	[more]
Q568J8	3.6e-06	38.36	Transmembrane protein 256 OS=Danio rerio OX=7955 GN=tmem256 PE=3 SV=1	[more]
Q5F285	4.7e-06	38.03	Transmembrane protein 256 OS=Mus musculus OX=10090 GN=Tmem256 PE=1 SV=1	[more]
Q8N2U0	1.4e-05	37.84	Transmembrane protein 256 OS=Homo sapiens OX=9606 GN=TMEM256 PE=3 SV=1	[more]
Q2KI29	1.8e-05	36.49	Transmembrane protein 256 OS=Bos taurus OX=9913 GN=TMEM256 PE=3 SV=1	[more]

BLAST of Spg006286 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I0K9	1.8e-37	98.73	transmembrane protein 256 homolog OS=Cucurbita maxima OX=3661 GN=LOC111468350 PE...	[more]
A0A6J1GM00	1.2e-36	96.20	transmembrane protein 256 homolog OS=Cucurbita moschata OX=3662 GN=LOC111455589 ...	[more]
A0A6J1C1Y8	1.0e-35	96.20	transmembrane protein 256 homolog OS=Momordica charantia OX=3673 GN=LOC111007644...	[more]
A0A0A0K1T6	1.7e-35	94.94	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G032280 PE=4 SV=1	[more]
A0A1S3CG60	1.7e-35	94.94	transmembrane protein 256 homolog OS=Cucumis melo OX=3656 GN=LOC103500518 PE=4 S...	[more]

BLAST of Spg006286 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G04900.1	2.2e-35	84.81	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT2G04900.2	8.5e-35	84.62	unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: cellular_...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006696	Protein of unknown function DUF423	PFAM	PF04241	DUF423	coord: 20..79 e-value: 7.6E-14 score: 51.7
IPR006696	Protein of unknown function DUF423	PANTHER	PTHR43461	TRANSMEMBRANE PROTEIN 256	coord: 5..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg006286.1	Spg006286.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane