Spg006286 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg006286
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptiontransmembrane protein 256 homolog
Locationscaffold4: 4691414 .. 4700391 (-)
RNA-Seq ExpressionSpg006286
SyntenySpg006286
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTACAACATTACACTAATTTTTTTTCTCTTCCTAATTTTTCCGACCGGCGATCGAGGGCCTCCATCTCCAAATTCCTCGCCGCCACATCTTCGGAGCCAGAGCCGGCTCCGGCCCGGATCTAATTCTTCCATGTCCGACCTTCAGATTTCCCCAATTTTATGAACCCTAATTTACTCTTCTGTGCACTTCCAGTTACATTTTCCCCTCTTTTTTTTTTGAAAAAAGGGGAACCTAATTTTTAGGGGAATTTCTTCTGTTTTCGCGGGAGCAAGTTCGTTTTAGTGGGCTAGTGCCTCTGGTACAGTGAGATTTGCCCACAGCTGAGCTTAATTTTGCTCGATGTTCTAAGTACACGTGGCGATCTGGATAGTTACCACCTCCATTTTCTTGCTCGGATTTCAGTGAGCTTTTTTTAGGTATTTGCTTTTTTGGCTTTGGTTTTTTTCTTTTAATTTTAAGTGGTATAAAGTATTTGTAGCGTATGGATTTTGTACATGTGCTGTTGGTGTTTTGAATGTGTGTTTTTTTTTTTTGGGTGTGAATTGAGGAAACTCGGGGGTTGATTTGAAAATTGAGCTGAATTTTGTGCGCTCGAGTGGGTATGGATTTGTTGCGAAATGGGGTTTCTGGGTTTGGTGTGAAGTGTTTGAATGTTGAGAAAACTGAAGATTTTGATGGGATGTTGAGATTTTTAGTTGCGGCTGTACTCTGGTTACTGAGAAATGAAAATGTCGATGTTGTCGAATTGTTTGAGATTGGGACTGGTTGATTCTTTTACTTCAAAGATCGAGATTCTCGAGGCTTTGATTTTTAATTTTTTTTTCCAGTTTACTGTAGCTTGGTGATAAATTATGCATGAATTTCCAGTTCAAGATCTCGTCTTTTGTTTTCCTTTCTTCTCGTTTAGTTGCCATAATGAGAATTTTCGACTCGATTGACTCTGAGATTTTACCTTTTCTTTGCGTTGAAAAAAAAAAAACTCTGCAGGAATTGTTCGCTTTCTCAAGCTATATTCCCGTGGAACGTTGACATTTGTGCCAATTATTAGGGAACGTGGAAATGTGGATATGTTTGAGAATGTGGCTTCATGAGCTGTTAAGAACAACTCACTGGTCGTAGTTTTTTATCTCTGAGTTTTTGGTCTTTCACTGATTTAGATTTGTAAATGGAAGTAAACAAAGAGGAGGCCTTTAAAGCAAAAGAGGTCGCTGAGAAGCGTTTTGCCAAGCGAGACTTCAATGGCGCAAAGAATTATGCATTGAAGGCCAAAACTTTGTTCCCAGAGATGGATGGGATATCTCAAATGGTGGCAACTTTTGATGTTTATGTTGCTTCTGAGATTAAGTGCAATGGCGAGGTGGATTATTATTCTATTCTAGGATTGAAGCCTTCTGCAAACAAAGAGGCTATAAAGAAACAGTACAAGAAAATGGCTGTGTTGCTCCATCCTGACAAGAATAAGACTGTCGGGGCCGATGGAGCGTTTAAGCTTGTTTCTGAAGCATGGGCTCTACTTTCAGATAATTCCAAGAGAAATGCATATGATATTAAGAGAACCACACAATTGGCATCTGCAGTCAACCAGCCAAACTTATCTTCAGCTCATGCTTCTGCGGCTACAAGTTTTAACAACTATACCAATCTGTCCATGTCCCACGGTAGACTTGATACCTTTTGGACTGTTTGCACCTCCTGTAAAGTTCAGTATGAGTATCTCCGGAAATACGTGAACAAGAAACTTCGGTGCAAGAATTGCCGCGGCGTTTTCATTGCCGTGGAAACTGGGGCTGCCCCAGTGAATGGTTCTTTCCCTTACTGCTCCTGGTCAAATGTTGCTGGTAATCGGTATGGAAGTCATGGATTTGAGGGTGTTACGTATATCCCAGGAGATACTAGCTTTTTTACTGGACATGGTTATGAGTATGTTTCAAATGTCTCATTTCAGTGGAATTCATCATCTGGAGTTTACACTCAAACCTTGGGCCCGAATGGACCATCTTCGGTACCTGTCGATAATGTTGGCCAAACAAATGGACATTTCAGTACATCAGGAGTGAAGGATAAGACAAGAGTCAATGGGAAGCGTTCTATGAAAAACAAGGTGGTTCATATGAATGCAAATGCACCCTCTGTCTGTAACGAGATTCTGGGATCAGATAGCAATGGAGCTGATAAGAGAAGGAAGGTTGTCGCAGAAGCCAGTTTGAGAAACGGATATGTGGAGAAGGGACCACTGCCTGCTTCAGATTCAGGATTAGCTAATGGTAATGCTACTGTTAAGCATGAGCCCGTAGCTTCTTCCACTCCAACCGAGCTTTCAGCTAAGCGCATCCCTGTTCCTCCTGCATTTGACCCCAGAAAGCTGTTAATTGAGAAGGCAAGGACTGTAATTCGCAAGAAGTTGGAAGAGATAAGGATTTCTTCAGCCAATTCTGCTGCTCATGAGAAATCAAAGACGGAGTCTCAAGTTGGATTGGTTGGAAAGACTGGACGGGCACCTAAAACTACCAATTCTGATGTATCCGGCCGCTGGTTAGACAAGGATAGAGCTGGACCAATCTCAATAAATGTACCTGATTCTGACTTCCACGATTTTGACAAAGATCGATCAGAGGAATGCTTCAAGGCAAAGCAAATATGGGCTCTGTACGATGAAGAAGATGGTATGCCTCGCTTGTACTGTCTGATTCGCGAGATCATCTCAGTTAAACCATTTAAGATTCATATAAGTTATTTAAACTCCAAAACTGACACCGAATTTGGGTCAGTCAACTGGTTGGAATATGGGTTTACAAAATCCTGTGGAAATTTCCGTGCTTGGCACTCTGATGTCATTGAACATATCAACATCTTCTCTCATGTCTTAAGCCGCGAAAAAGCCGGTAGGGGAGGCTGCGTTCGGATATATCCAAGAAGTGGAGACATTTGGGCTGTTTATCGAAACTGGTCTACAAACTGGGACAGATCAACCCCTGATGAAGTGAGGCACCGATATGAAATGGTGGAGGTTCTTGATGATTACTCTGAAGACTTTGGTGTCTGCATCTGCCCCCTTGTGAAACTAACTGGATTCAAGACAGTTTATCAAAGAAATGCAGACAAAGATGCCATTCGTTGGATTCCCAGGAAAGAGATGCTACGGTTTTCACACCAGGTACCCTCTTATTTACTGAAGGGAGAAGCAAGTAACTTGCCTGAACATTGTTGGGATCTCGATCCGGCTGCCACTCCGGACGAACTGCTCCACACTGCGACAGAAAATGAAGGGTTGACTGAAACCCAGTTGAGTTAAGCAGGAGAATTAAAGAAGATGATGATAATGGGTCAGAGTCAATGTGAGCAGTCTTAACCAAAGTTAGGTCTAACTGTACAAATATGTCTCATGAGTTTGGCCAAATGCCATTACAGACAAGACGAGAAATCTACAGTTGATTTGGATAATGTCTGCTGAGTCGCTTCTATGACAGACGAATTTAGCTTCAAGTAAATGCTTTTACAGATGAAGAAACTACCTCTATCTGGACGTATCTTGAAAGGAGCACTTGAAAATTTTCGTTGGCAAGCAACTTTGAGGCTTATTATCCATCACTGCAGCACAACAATACAAATTATTATGCTACGTTCCCTTCCTCGTTAATCAGAAGAGCTTTGTTTTTCTTTTTTTCCTCCTTTTTCCAGATTAGTTTCTCTTACTTTGTTCTAATGGAAATGAACGAGAACTTGGCTGTTTAATCTCTTGATTTTGTTGTAAAATTTGAAGCTTCAATGCTTTGAGGCCTCATTTCATACGACAAACTACTGTTCATCTGATTCCCCAGCTGCTTCATGATTCTCATTCACATATCTGAAAACACCGACTTCTAAAAGTCGGGATTAGATTAAATTTACCGTAATCCATTAACATTCAAGAGTAGAAAACAACTATAGTATCAACTATCAAGTGATGAAATATTGGTCTCTTTGTAATCTATCAACACATTCGTTTATGCCATAACTCGAATCTCCTGTCGCTTTAGCTCCCATGCTTTCATCATAATGCTTTTCCCTATAGTTTTTTTTGGCTGCTAAAGTACCATTCTTTCCATTCATTGCACAGCCAAGCCGCAGTTTTGATGAAGAAAAGTCAACTGGTTGACCAATCCAATGAACAGAGCCAGTCAAGTCTTCAGGTTCTGCAGATAAATGAAAAGCAATCAAATCAAAAACCAGCACAAGGAAACCCTTTTTCTTTTTCTTTTCATTTGTCTTCTCTTTTTGGGCCGATATGTCGGCTGTGGACGAGAGAGAGCGACAGGTCGTTCTAACTTCAAACAAAGGTCATCATTTGGGAATTAAAAAAGAAAAACCTTCACAAAAACCCGCCTCGAAAACAAAGCCAATCAAACCCAGAGAGCGAAGATCGAGATGAACCCACTTCACTGGCACAAAGTCGCTGCGATTTCTGGTAATTTCTCTCTCGATTCTCGTGTTCTAGCTCCGCGGATTTTAATTCGATTGTGATTTGATTTCGGCTTCAAACAGGCGTTGCAGCTCTTGGATTGGGTACGTACGGCGCCCATGTCTTCAAACCCCAAAACCCAGCTTATAAAGAGGTTGATTTACTCGATCTTTCGCTTCTTTGATTTGATTCCTTCGATTTGATTTTGATTGTTGTTTCTGGAATATCAATTTTCTGAAGGTTTGGCAAACGGCAGCTCTGTATCATTTGGTTCACACAGCGGCTCTGCTTGCTGCCCCTTCGACCAAGAACCCTAACATTGTAAGTTTTCCCCCCTTTTCATTCCTCGACTTTGTAGCAGACTCGTTCTTGGACGTAAATTTCTCCTTATGATCATTTTGGGCAGAGCATATTGATATACCAAACGATTGAACACACCCTAACCTAGAAGTTTTAAGCCCTAAATCTGAAAATTTGCTGGTACAGTGGGGATTTAACATAATATTGAACACATTCGTCTTCTTACTTATTGATATAAATAGTTCGCATGAATTCAATTAATATGTGAGCCCATAATTGACAAGAATGTTGAATTTGTATAAAAGTAGATAGCTTAAAGTTTTAGGTTTTGAGTTTGGCAGTGATTTAATAGCTATTAATATTTAGGGTTTTTTTTTAGTTCATCAACTTTTGGGTGGGGGATTTGAACAACTCACCCCTTGGTCGAGGGTAAATGTCAATTACCGTTTAGCTATGCTGGCTTTGACGATTAATATTTAGGTTTAATTACAAATCCAAACATAATTTAGATTAAATATTTCAACATCAATGTTGAGACTTGAGAAGATAATTATAATGAAAATGTATGACTATCACATATTCATAAATATAAAGTTACCCATTTATTTCTCAAAAAAAAAAAAAAAAAAAGTTACCCATTTAAAATTTCCTTAATATCTAAAGTCCGTTTGACAATAATTTTTTTTAGTTGTGTGTTTTTTGAAAATTGGGCATGTTTCCTCCCCTTTCTTTAGAATGGTTTTCATCTTTAAGAGAGATTTGAATTCAAAACCACTGTCGTTTTGTTTCTTCAAAATTTGACTTGGATTTTGTAAACATTTGTAAAAAGTAAATAACAAATCAAAGAAACTTATATGTAGAAGTAGTGTTCGTAAGCATAATTTTCAAAAACAAAAAACTAATTGGTTATCAAACGGACCTTAAGTTATTTATTATATGGACTTCTTAATATTGAAGCTGGATAATTAGATTTGTGTTTTTTATTTTTTTTTTGAAGCATAATTAGATTTGTGTTTTTGTTGCCTATACATGAGTCTTTTAATGCCTATCATTATGTTTCTCTTCTGGCAGTTTGGAGGCCTTTTGACTGCTGGAATTCTTGCATTTTCGGGCACGTAAGGCCAATATTTATTTTCATTTTTCTTTTAAAAGTTTGTTTGGATTTCTCTCTTTCATTTCTATTTGATATTAGCATCCAATGTGTCTAAGCTAGCTAAGATCAGTGTTTTAAAAGGCTCAAGGCGCACTAAGGCGCAATGGCTGCCTGGGGCCTAGGCTCAAGGCGCACAAAAAGGCGCGGGCTTTATTATGCAAGGCGCACTATATAGAAAAAAAATTAAAAAAAAATATATACATGTATATAAAACACTTTCATGGGAAGTAATGAAGTTTTTAATCAAGAAAAATAGATAAAAGATTAACAATATTCAAATAGCAGACTTCAAACATCGAGTTGAGTCAAATGTCAATACTGCACAAAAATTAAAAAACAAACAAACAATACAATACAACACTAATCAACAATAAAAATCTAAAGTCCTAAAGATCAAACTCATCATCACTAAATTGATCTTCGTCCTCATTCTCTCCATCATTGGACTTATAGCCTTCTGTATCTTCTTCTTCTTCAGTCTCAGAGTCATCCAAATTTACTGTTGTGCGTGTGGGTCGGGGTCGTGTGGAGGATGAACATGGAGCATGAGCTTTAGTCTTGGTTCTTGAGGCATTAGCCCTAGAATAATAGAGAGGTTCTTTTGCCCCAGCAGCTCTTGAAACATCGCCCCATGTCAATGAATCGTCATCGAATACAAGATCATCATCCTCTTCAGAATCATCATCCATTCTTCCCATCAACCACTCATTACTATCATCAATATCTTTTAAAGAGATTGGGTCGATGATATCCCTAATGTTATATCGACGTTTCAATGCTCTATTATATTTTATGAACACCAAATCATTCAGACGACTTTGAGCAAGTCTATTCCTTTTCTTGCTATGAAGCTGCAAGTATAAATAAAAAAAGTTCCATGACAATTCAAACCAAGAACTTAAAACTTAATTCTTAAGATACTTGAGGAGAAAATAACTAACCTGTTCAAAAACACTCCAATTACGTTCGCACCCCGAAGCACTACAAGTAAGACCTAAAATTCTAACGGCAAACCTTTGCAAGTTTGGAGTTGATTGTCCGAAATCATCCCACCATTCCACTAAAGACCAAAATTATGTTAATAGCTTCCAATTCAAGTAAATAATTTAGTGTTTTAACTTTTATCAAATATAAAATATTCAAATTCAAAATTTACCTGGAGATCTTTTGTCTCTTTGTCTAAGTGCCAAAGGTGATCCAAATAATCCTTCGGCTTTCTTGTACTTGGTCAGTTCCTCAAGTATCTTGTCTTGTACCTCCAAAGAAGGAACCATTTTTGTTATACATGAGTATAACCCGTTAACAATTTCATCATCAGCTTGAATGTTGGGATTTGAATAATAGAATTCTGGGTTTAAATAATAACCCGCTGCATGCAAAGGACGATGCAACTGAAGCTCCCATCTTTGATCAATGATCTTAAAAATATCTTTGTATTTCTCTTCCTTTCCATTAAAGGATTTAGCTATGGCCTCCTTAGCTCTATCCATGGCCTCATAAATATATCCCATAGGAGGCTTCTTCTCACCATCCACCAACCTAAGAACTCGTACTAGAGGGCCCGAGACTTTAAGAGCAAACACAATTGTATTCCAAAAATTGGCCATCAAAATAGTTTGAACAACTCGCTTGCCTTGTTGCTCCTTACTCCATTTGCTATTCTTCCATTCATCTGAAGTAAACATCTTTCTTAAGTTGTTCTTTTGACGATGTATACTTGATAGTGTGATGCAAGCTGTAGCAAAGCGAGTCTTAGCTGGTCTAACCAACTCTTTCTGATCAGTAAACCTTCTCATCATATTTAACAATCCAGGACGAACATAAATGAAGTTGCTAATCTCCATGCCTCGTTTAAGTGTTTTGCGAATATTTGGTATCTTGTATATATCCTCCAACATCAAGTCCAAGCAATGAGCGGCACACGGCGACCAAACTAAATATGGTCGTTTTGCTTCTAACAATCTCCCTAGAAAAAGGTAAAGAAGGAAAGTATTAGGCAACTCAGTATGTCGTAAGACTTACAACTTAAGAGTAAGAAAATGAGCTAGTATTTTAAATTCTTACGTACCTGCCATCACATTTGCTGAGGCACTATCAGTAACAACTTGTACAACATTGGCTTCTCCAATGCGCTCTACAAAATTGTCGAGTAGTTCAAACATTTTCTTCCCATCCTTCACATAAGACGAGACATCAATGGACTCAATAAACATAGTGCCTTTTGGACTATTAACTAAGAAGTTGAGTAATGTCCTATTTCTTCTATCTGTCCATCCATCAGTCATGATGGTGCATCCAACCTTGACCCATTCTTCTTTATTTCCCTTCATCAACTCATTTGTGGTTTCCAACTCTTTTTTTAAACAAGGCACCCTCAATTCATGATAAGTTGGTGGTTTCAATCCAGGACCGAATTGTCCTATTGCTTCAATCATGGGTGCAAAGCTTTCATAATTGCAAGCATTTAAAGGTATCCCAGCATCATAAAACCATCGAGCCATTCTTTGGATGGTGTGCCCCCTCATCTCCTTTTTGTAGGCTTCATTCAACGTTGTTTGCTTTCCTTTCTCGTTCTTTCGATTTTGAACAACAGTTTCTGGATTAGGAGTAAAATATGCATCTATAGGACCCTTTTGTTTTGGACCTTTTTGTTTCTTAAAAGAAGACTTAATTGATTCCCAACTTACTCTTTGAGAGTTTGCACTTGACGTTCTCTTACCCGAATGAGTTACTAACACATCTTCTTCATCCTCATCATCAATACCATAACTTTCAGCATCAATGTCTATGTCCGGAATCAAATTTCGTTGATCTTTGATTTCCTTCTTCTTCAACATATATGCTTTAATTTCCTCCTTGACATGATCGGGACATTTTCTACATGCTGTGGCATTTCTATAACCACCAACAAGGTGTTGCTTCATTCTATAAACCCCTCCTTTTGTTATTTTTGAACAAAAACTACATACTAATGAATTTATATCTTCGGCATTCTCCAATCGAGCATACTTCCATGCTGGATCTGTTCTTAAACTATTCTCAGCCATCTATGATCTACCAATTAAGAGAGAATGAAGAGAATAAA

mRNA sequence

ATGAACCCACTTCACTGGCACAAAGTCGCTGCGATTTCTGGCGTTGCAGCTCTTGGATTGGGTACGTACGGCGCCCATGTCTTCAAACCCCAAAACCCAGCTTATAAAGAGGTTTGGCAAACGGCAGCTCTGTATCATTTGGTTCACACAGCGGCTCTGCTTGCTGCCCCTTCGACCAAGAACCCTAACATTTTTGGAGGCCTTTTGACTGCTGGAATTCTTGCATTTTCGGGCACGTAA

Coding sequence (CDS)

ATGAACCCACTTCACTGGCACAAAGTCGCTGCGATTTCTGGCGTTGCAGCTCTTGGATTGGGTACGTACGGCGCCCATGTCTTCAAACCCCAAAACCCAGCTTATAAAGAGGTTTGGCAAACGGCAGCTCTGTATCATTTGGTTCACACAGCGGCTCTGCTTGCTGCCCCTTCGACCAAGAACCCTAACATTTTTGGAGGCCTTTTGACTGCTGGAATTCTTGCATTTTCGGGCACGTAA

Protein sequence

MNPLHWHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTAALYHLVHTAALLAAPSTKNPNIFGGLLTAGILAFSGT
Homology
[Close]
BLAST of Spg006286 vs. NCBI nr
Match: XP_022969303.1 (transmembrane protein 256 homolog [Cucurbita maxima])

HSP 1 Score: 164.5 bits (415), Expect = 3.8e-37
Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 1  MNPLHWHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTAALYHLVHTAALLAAPSTK 60
          MNPLHWHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTA+LYHLVHTAALLAAPSTK
Sbjct: 1  MNPLHWHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 60

Query: 61 NPNIFGGLLTAGILAFSGT 80
          NPNIFGGLLTAGILAFSGT
Sbjct: 61 NPNIFGGLLTAGILAFSGT 79

[Close]
BLAST of Spg006286 vs. NCBI nr
Match: XP_023554646.1 (transmembrane protein 256 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 163.3 bits (412), Expect = 8.5e-37
Identity = 77/79 (97.47%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 1  MNPLHWHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTAALYHLVHTAALLAAPSTK 60
          MNPLHWHKVAAISGV+ALGLGTYGAHVFKPQNPAYKEVWQTA+LYHLVHTAALLAAPSTK
Sbjct: 1  MNPLHWHKVAAISGVSALGLGTYGAHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 60

Query: 61 NPNIFGGLLTAGILAFSGT 80
          NPNIFGGLLTAGILAFSGT
Sbjct: 61 NPNIFGGLLTAGILAFSGT 79

[Close]
BLAST of Spg006286 vs. NCBI nr
Match: XP_022953076.1 (transmembrane protein 256 homolog [Cucurbita moschata] >KAG7011866.1 hypothetical protein SDJN02_26773 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 161.8 bits (408), Expect = 2.5e-36
Identity = 76/79 (96.20%), Postives = 78/79 (98.73%), Query Frame = 0 

Query: 1  MNPLHWHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTAALYHLVHTAALLAAPSTK 60
          MNPLHWHKVA ISGVAALGLGTYG+HVFKPQNPAYKEVWQTA+LYHLVHTAALLAAPSTK
Sbjct: 1  MNPLHWHKVAGISGVAALGLGTYGSHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 60

Query: 61 NPNIFGGLLTAGILAFSGT 80
          NPNIFGGLLTAGILAFSGT
Sbjct: 61 NPNIFGGLLTAGILAFSGT 79

[Close]
BLAST of Spg006286 vs. NCBI nr
Match: KAG6572230.1 (hypothetical protein SDJN03_28958, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 161.4 bits (407), Expect = 3.2e-36
Identity = 76/79 (96.20%), Postives = 77/79 (97.47%), Query Frame = 0 

Query: 1   MNPLHWHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTAALYHLVHTAALLAAPSTK 60
           MNPLHWHKVA ISG AALGLGTYGAHVFKPQNPAYKEVWQTA+LYHLVHTAALLAAPSTK
Sbjct: 57  MNPLHWHKVAGISGAAALGLGTYGAHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 116

Query: 61  NPNIFGGLLTAGILAFSGT 80
           NPNIFGGLLTAGILAFSGT
Sbjct: 117 NPNIFGGLLTAGILAFSGT 135

[Close]
BLAST of Spg006286 vs. NCBI nr
Match: XP_022135760.1 (transmembrane protein 256 homolog [Momordica charantia])

HSP 1 Score: 158.7 bits (400), Expect = 2.1e-35
Identity = 76/79 (96.20%), Postives = 77/79 (97.47%), Query Frame = 0 

Query: 1  MNPLHWHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTAALYHLVHTAALLAAPSTK 60
          MNPL WHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTA+LYHLVHTAALL APSTK
Sbjct: 1  MNPLLWHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTASLYHLVHTAALLVAPSTK 60

Query: 61 NPNIFGGLLTAGILAFSGT 80
          NPNIFGGLLTAGILAFSGT
Sbjct: 61 NPNIFGGLLTAGILAFSGT 79

[Close]
BLAST of Spg006286 vs. ExPASy Swiss-Prot
Match: A4K526 (Transmembrane protein 256 homolog OS=Bufo gargarizans OX=30331 PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 4.9e-11
Identity = 33/76 (43.42%), Postives = 49/76 (64.47%), Query Frame = 0 

Query: 6  WHKVAAISGVAALGLGTYGAHVFK--PQNPAYKEVWQTAALYHLVHTAALLAAPSTKNPN 65
          W ++ A+SG  A+  G YGAH F+   ++   KE+++T   YH +H+ ALLA P  + P 
Sbjct: 7  WGRLGAVSGALAVTAGAYGAHGFRRSDRDEYLKELFETGNRYHFLHSLALLAVPHCRRPL 66

Query: 66 IFGGLLTAGILAFSGT 80
          + G LLT+GI+ FSGT
Sbjct: 67 LAGSLLTSGIVLFSGT 82

[Close]
BLAST of Spg006286 vs. ExPASy Swiss-Prot
Match: Q568J8 (Transmembrane protein 256 OS=Danio rerio OX=7955 GN=tmem256 PE=3 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 3.6e-06
Identity = 28/73 (38.36%), Postives = 40/73 (54.79%), Query Frame = 0 

Query: 8  KVAAISGVAALGLGTYGAHVFKPQNPA--YKEVWQTAALYHLVHTAALLAAPSTKNPNIF 67
          +VA ISG  A+  G YGAH F+    +   +E++ TA  YH  H+ ALL A   + P + 
Sbjct: 9  RVAGISGALAVAAGAYGAHGFRRSEASDYQRELFDTANKYHFYHSLALLGAARCRKPALA 68

Query: 68 GGLLTAGILAFSG 79
          G +L  G+  F G
Sbjct: 69 GVILLTGMGCFCG 81

[Close]
BLAST of Spg006286 vs. ExPASy Swiss-Prot
Match: Q5F285 (Transmembrane protein 256 OS=Mus musculus OX=10090 GN=Tmem256 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 4.7e-06
Identity = 27/71 (38.03%), Postives = 41/71 (57.75%), Query Frame = 0 

Query: 6  WHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTAALYHLVHTAALLAAPSTKNPNIF 65
          + ++ A+SG  ALGL +YGAH  +  +   KE++  A  +H +H+ ALL  PS + P   
Sbjct: 8  FRRLGALSGAGALGLASYGAHGAQFPDAYGKELFDKANKHHFLHSLALLGVPSCRKPVWA 67

Query: 66 GGLLTAGILAF 77
          G LL +G   F
Sbjct: 68 GLLLASGTTLF 78

[Close]
BLAST of Spg006286 vs. ExPASy Swiss-Prot
Match: Q8N2U0 (Transmembrane protein 256 OS=Homo sapiens OX=9606 GN=TMEM256 PE=3 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 1.4e-05
Identity = 28/74 (37.84%), Postives = 42/74 (56.76%), Query Frame = 0 

Query: 6  WHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTAALYHLVHTAALLAAPSTKNPNIF 65
          + ++ A+SG AALG  +YGAH  +  +   KE++  A  +H +H+ ALL  P  + P   
Sbjct: 8  FRRLGALSGAAALGFASYGAHGAQFPDAYGKELFDKANKHHFLHSLALLGVPHCRKP--- 67

Query: 66 GGLLTAGILAFSGT 80
             L AG+L  SGT
Sbjct: 68 ---LWAGLLLASGT 75

[Close]
BLAST of Spg006286 vs. ExPASy Swiss-Prot
Match: Q2KI29 (Transmembrane protein 256 OS=Bos taurus OX=9913 GN=TMEM256 PE=3 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 1.8e-05
Identity = 27/74 (36.49%), Postives = 41/74 (55.41%), Query Frame = 0 

Query: 6  WHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTAALYHLVHTAALLAAPSTKNPNIF 65
          + ++ A+SG  ALGL +YGAH  +  +   KE++     +H +H+ ALLA P  + P   
Sbjct: 8  FRRLGALSGAGALGLASYGAHGAQFPDAYGKELFDKTNKHHFLHSLALLAVPLCRKPLWA 67

Query: 66 GGLLTAGILAFSGT 80
          G LL +G   F  T
Sbjct: 68 GLLLASGTTLFCTT 81

[Close]
BLAST of Spg006286 vs. ExPASy TrEMBL
Match: A0A6J1I0K9 (transmembrane protein 256 homolog OS=Cucurbita maxima OX=3661 GN=LOC111468350 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.8e-37
Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 1  MNPLHWHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTAALYHLVHTAALLAAPSTK 60
          MNPLHWHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTA+LYHLVHTAALLAAPSTK
Sbjct: 1  MNPLHWHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 60

Query: 61 NPNIFGGLLTAGILAFSGT 80
          NPNIFGGLLTAGILAFSGT
Sbjct: 61 NPNIFGGLLTAGILAFSGT 79

[Close]
BLAST of Spg006286 vs. ExPASy TrEMBL
Match: A0A6J1GM00 (transmembrane protein 256 homolog OS=Cucurbita moschata OX=3662 GN=LOC111455589 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.2e-36
Identity = 76/79 (96.20%), Postives = 78/79 (98.73%), Query Frame = 0 

Query: 1  MNPLHWHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTAALYHLVHTAALLAAPSTK 60
          MNPLHWHKVA ISGVAALGLGTYG+HVFKPQNPAYKEVWQTA+LYHLVHTAALLAAPSTK
Sbjct: 1  MNPLHWHKVAGISGVAALGLGTYGSHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 60

Query: 61 NPNIFGGLLTAGILAFSGT 80
          NPNIFGGLLTAGILAFSGT
Sbjct: 61 NPNIFGGLLTAGILAFSGT 79

[Close]
BLAST of Spg006286 vs. ExPASy TrEMBL
Match: A0A6J1C1Y8 (transmembrane protein 256 homolog OS=Momordica charantia OX=3673 GN=LOC111007644 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.0e-35
Identity = 76/79 (96.20%), Postives = 77/79 (97.47%), Query Frame = 0 

Query: 1  MNPLHWHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTAALYHLVHTAALLAAPSTK 60
          MNPL WHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTA+LYHLVHTAALL APSTK
Sbjct: 1  MNPLLWHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTASLYHLVHTAALLVAPSTK 60

Query: 61 NPNIFGGLLTAGILAFSGT 80
          NPNIFGGLLTAGILAFSGT
Sbjct: 61 NPNIFGGLLTAGILAFSGT 79

[Close]
BLAST of Spg006286 vs. ExPASy TrEMBL
Match: A0A0A0K1T6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G032280 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.7e-35
Identity = 75/79 (94.94%), Postives = 78/79 (98.73%), Query Frame = 0 

Query: 1  MNPLHWHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTAALYHLVHTAALLAAPSTK 60
          MNPL+WHKVAAISGVAALGLGTYGAH FKP+NPAYKEVWQTA+LYHLVHTAALLAAPSTK
Sbjct: 1  MNPLYWHKVAAISGVAALGLGTYGAHGFKPKNPAYKEVWQTASLYHLVHTAALLAAPSTK 60

Query: 61 NPNIFGGLLTAGILAFSGT 80
          NPNIFGGLLTAGILAFSGT
Sbjct: 61 NPNIFGGLLTAGILAFSGT 79

[Close]
BLAST of Spg006286 vs. ExPASy TrEMBL
Match: A0A1S3CG60 (transmembrane protein 256 homolog OS=Cucumis melo OX=3656 GN=LOC103500518 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.7e-35
Identity = 75/79 (94.94%), Postives = 78/79 (98.73%), Query Frame = 0 

Query: 1   MNPLHWHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTAALYHLVHTAALLAAPSTK 60
           MNPL+WHKVAAISGVAALGLGTYGAH FKP+NPAYKEVWQTA+LYHLVHTAALLAAPSTK
Sbjct: 46  MNPLYWHKVAAISGVAALGLGTYGAHGFKPKNPAYKEVWQTASLYHLVHTAALLAAPSTK 105

Query: 61  NPNIFGGLLTAGILAFSGT 80
           NPNIFGGLLTAGILAFSGT
Sbjct: 106 NPNIFGGLLTAGILAFSGT 124

[Close]
BLAST of Spg006286 vs. TAIR 10
Match: AT2G04900.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF423 (InterPro:IPR006696); Has 1824 Blast hits to 1824 proteins in 878 species: Archae - 0; Bacteria - 1498; Metazoa - 118; Fungi - 14; Plants - 58; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink). )

HSP 1 Score: 145.2 bits (365), Expect = 2.2e-35
Identity = 67/79 (84.81%), Postives = 76/79 (96.20%), Query Frame = 0 

Query: 1  MNPLHWHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTAALYHLVHTAALLAAPSTK 60
          M+P  WHKVAAISG+AALGLGTYGAHVFKP+NP+YK+VWQTA+LYHLVHTAAL++APSTK
Sbjct: 18 MDPRMWHKVAAISGMAALGLGTYGAHVFKPENPSYKQVWQTASLYHLVHTAALVSAPSTK 77

Query: 61 NPNIFGGLLTAGILAFSGT 80
           PNIFGGLLTAGI+AFSGT
Sbjct: 78 YPNIFGGLLTAGIVAFSGT 96

[Close]
BLAST of Spg006286 vs. TAIR 10
Match: AT2G04900.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF423 (InterPro:IPR006696); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 143.3 bits (360), Expect = 8.5e-35
Identity = 66/78 (84.62%), Postives = 75/78 (96.15%), Query Frame = 0 

Query: 1  MNPLHWHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTAALYHLVHTAALLAAPSTK 60
          M+P  WHKVAAISG+AALGLGTYGAHVFKP+NP+YK+VWQTA+LYHLVHTAAL++APSTK
Sbjct: 18 MDPRMWHKVAAISGMAALGLGTYGAHVFKPENPSYKQVWQTASLYHLVHTAALVSAPSTK 77

Query: 61 NPNIFGGLLTAGILAFSG 79
           PNIFGGLLTAGI+AFSG
Sbjct: 78 YPNIFGGLLTAGIVAFSG 95

The following BLAST results are available for this feature:
BLAST of Spg006286 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022969303.13.8e-3798.73transmembrane protein 256 homolog [Cucurbita maxima][more]
XP_023554646.18.5e-3797.47transmembrane protein 256 homolog [Cucurbita pepo subsp. pepo][more]
XP_022953076.12.5e-3696.20transmembrane protein 256 homolog [Cucurbita moschata] >KAG7011866.1 hypothetica... [more]
KAG6572230.13.2e-3696.20hypothetical protein SDJN03_28958, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022135760.12.1e-3596.20transmembrane protein 256 homolog [Momordica charantia][more]
BLAST of Spg006286 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
A4K5264.9e-1143.42Transmembrane protein 256 homolog OS=Bufo gargarizans OX=30331 PE=3 SV=1[more]
Q568J83.6e-0638.36Transmembrane protein 256 OS=Danio rerio OX=7955 GN=tmem256 PE=3 SV=1[more]
Q5F2854.7e-0638.03Transmembrane protein 256 OS=Mus musculus OX=10090 GN=Tmem256 PE=1 SV=1[more]
Q8N2U01.4e-0537.84Transmembrane protein 256 OS=Homo sapiens OX=9606 GN=TMEM256 PE=3 SV=1[more]
Q2KI291.8e-0536.49Transmembrane protein 256 OS=Bos taurus OX=9913 GN=TMEM256 PE=3 SV=1[more]
BLAST of Spg006286 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1I0K91.8e-3798.73transmembrane protein 256 homolog OS=Cucurbita maxima OX=3661 GN=LOC111468350 PE... [more]
A0A6J1GM001.2e-3696.20transmembrane protein 256 homolog OS=Cucurbita moschata OX=3662 GN=LOC111455589 ... [more]
A0A6J1C1Y81.0e-3596.20transmembrane protein 256 homolog OS=Momordica charantia OX=3673 GN=LOC111007644... [more]
A0A0A0K1T61.7e-3594.94Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G032280 PE=4 SV=1[more]
A0A1S3CG601.7e-3594.94transmembrane protein 256 homolog OS=Cucumis melo OX=3656 GN=LOC103500518 PE=4 S... [more]
BLAST of Spg006286 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G04900.12.2e-3584.81unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin... [more]
AT2G04900.28.5e-3584.62unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: cellular_... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006696Protein of unknown function DUF423PFAMPF04241DUF423coord: 20..79
e-value: 7.6E-14
score: 51.7
IPR006696Protein of unknown function DUF423PANTHERPTHR43461TRANSMEMBRANE PROTEIN 256coord: 5..79

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg006286.1Spg006286.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane