Spg006223 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg006223
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Nuclear transcription factor Y subunit C
Location	scaffold4: 3608183 .. 3608974 (-)
RNA-Seq Expression	Spg006223
Synteny	Spg006223

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCAATCAGAGCGTCAGCAACAATCACAGCAGCCTGCAGGTGGCGTCGGTGCAGGCCAGTTATCATATTCTAATCCTTACCAAACGGCGCCAATGGTCGCCTCCGGAACTCCTGCTATTACGATTCCCCCAACTCAGCCACCGTCCAGTTTTTCTAATTCTCCGCATCAGCTTGCCTATCAGCAAGCTCAGCACTTTCACCACCAGCAGCAACAGCAGCAGCAGCAACAGCTCCAAATGTTTTGGGCAAACCAAATGCAAGAGATTGAACAAACAACTGACTTTAAGAACCACAGTCTCCCCCTCGCCCGAATCAAGAAAATAATGAAAGCGGATGAAGACGTCCGAATGATTTCAGCTGAAGCACCAGTTATATTCGCAAAGGCATGTGAAATGTTCATCTTGGAGTTGACTCTGCGATCCTGGATTCATACAGAAGAGAACAAAAGGAGAACCTTACAGAAGAATGATATTGCAGCTGCAATTTCACGGACCGATGTCTTTGATTTCTTGGTCGATATTATTCCTAGAGACGAACTGAAAGAGGAAGGCCTCGGAATCACAAAAGCTTCCATTCCCGTAGTCGGTTCCCCTGCTGATCTTCCTTATTACTATGTTCCATCCCAGCATCCAGTGGGTGCTACAGGTATGATCATGGGGAAGCAATTAGATCAAGCAAACATGTACGGTGCTGCTTCCCAACAGCCCCGACCACCGATGCCTTTCATGCCATGGCCGCACACTCAAACTCAGCAGCAGCAACAAACTCAGCAGCAAAGTGATGCATAG

mRNA sequence

ATGGATCAATCAGAGCGTCAGCAACAATCACAGCAGCCTGCAGGTGGCGTCGGTGCAGGCCAGTTATCATATTCTAATCCTTACCAAACGGCGCCAATGGTCGCCTCCGGAACTCCTGCTATTACGATTCCCCCAACTCAGCCACCGTCCAGTTTTTCTAATTCTCCGCATCAGCTTGCCTATCAGCAAGCTCAGCACTTTCACCACCAGCAGCAACAGCAGCAGCAGCAACAGCTCCAAATGTTTTGGGCAAACCAAATGCAAGAGATTGAACAAACAACTGACTTTAAGAACCACAGTCTCCCCCTCGCCCGAATCAAGAAAATAATGAAAGCGGATGAAGACGTCCGAATGATTTCAGCTGAAGCACCAGTTATATTCGCAAAGGCATGTGAAATGTTCATCTTGGAGTTGACTCTGCGATCCTGGATTCATACAGAAGAGAACAAAAGGAGAACCTTACAGAAGAATGATATTGCAGCTGCAATTTCACGGACCGATGTCTTTGATTTCTTGGTCGATATTATTCCTAGAGACGAACTGAAAGAGGAAGGCCTCGGAATCACAAAAGCTTCCATTCCCGTAGTCGGTTCCCCTGCTGATCTTCCTTATTACTATGTTCCATCCCAGCATCCAGTGGGTGCTACAGGTATGATCATGGGGAAGCAATTAGATCAAGCAAACATGTACGGTGCTGCTTCCCAACAGCCCCGACCACCGATGCCTTTCATGCCATGGCCGCACACTCAAACTCAGCAGCAGCAACAAACTCAGCAGCAAAGTGATGCATAG

Coding sequence (CDS)

ATGGATCAATCAGAGCGTCAGCAACAATCACAGCAGCCTGCAGGTGGCGTCGGTGCAGGCCAGTTATCATATTCTAATCCTTACCAAACGGCGCCAATGGTCGCCTCCGGAACTCCTGCTATTACGATTCCCCCAACTCAGCCACCGTCCAGTTTTTCTAATTCTCCGCATCAGCTTGCCTATCAGCAAGCTCAGCACTTTCACCACCAGCAGCAACAGCAGCAGCAGCAACAGCTCCAAATGTTTTGGGCAAACCAAATGCAAGAGATTGAACAAACAACTGACTTTAAGAACCACAGTCTCCCCCTCGCCCGAATCAAGAAAATAATGAAAGCGGATGAAGACGTCCGAATGATTTCAGCTGAAGCACCAGTTATATTCGCAAAGGCATGTGAAATGTTCATCTTGGAGTTGACTCTGCGATCCTGGATTCATACAGAAGAGAACAAAAGGAGAACCTTACAGAAGAATGATATTGCAGCTGCAATTTCACGGACCGATGTCTTTGATTTCTTGGTCGATATTATTCCTAGAGACGAACTGAAAGAGGAAGGCCTCGGAATCACAAAAGCTTCCATTCCCGTAGTCGGTTCCCCTGCTGATCTTCCTTATTACTATGTTCCATCCCAGCATCCAGTGGGTGCTACAGGTATGATCATGGGGAAGCAATTAGATCAAGCAAACATGTACGGTGCTGCTTCCCAACAGCCCCGACCACCGATGCCTTTCATGCCATGGCCGCACACTCAAACTCAGCAGCAGCAACAAACTCAGCAGCAAAGTGATGCATAG

Protein sequence

MDQSERQQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQQTQQQSDA

Homology

[Close]

BLAST of Spg006223 vs. NCBI nr
Match: XP_004136852.1 (nuclear transcription factor Y subunit C-2 [Cucumis sativus] >XP_008455266.1 PREDICTED: nuclear transcription factor Y subunit C-2 [Cucumis melo] >XP_008455267.1 PREDICTED: nuclear transcription factor Y subunit C-2 [Cucumis melo] >XP_011658757.1 nuclear transcription factor Y subunit C-2 [Cucumis sativus] >XP_016901763.1 PREDICTED: nuclear transcription factor Y subunit C-2 [Cucumis melo] >XP_031744926.1 nuclear transcription factor Y subunit C-2 [Cucumis sativus] >KAA0031528.1 nuclear transcription factor Y subunit C-2 [Cucumis melo var. makuwa] >KGN43662.1 hypothetical protein Csa_017325 [Cucumis sativus] >TYK06981.1 nuclear transcription factor Y subunit C-2 [Cucumis melo var. makuwa])

HSP 1 Score: 487.6 bits (1254), Expect = 6.5e-134
Identity = 256/265 (96.60%), Postives = 258/265 (97.36%), Query Frame = 0


Query: 1   MDQSER---QQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60
           MDQSER   QQQSQQPAGGVGAGQL YSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH
Sbjct: 1   MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60

Query: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120
           QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAASQQP 240
           RDELKEEGLGITKAS+PVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGA +QQP
Sbjct: 181 RDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQP 240

Query: 241 RPPMPFMPWPHTQTQQQQQTQQQSD 263
           RP MPFMPWPHTQ QQQQQTQQQSD
Sbjct: 241 RPSMPFMPWPHTQPQQQQQTQQQSD 265

[Close]

BLAST of Spg006223 vs. NCBI nr
Match: XP_038888434.1 (nuclear transcription factor Y subunit C-2-like [Benincasa hispida] >XP_038888435.1 nuclear transcription factor Y subunit C-2-like [Benincasa hispida] >XP_038888436.1 nuclear transcription factor Y subunit C-2-like [Benincasa hispida] >XP_038888437.1 nuclear transcription factor Y subunit C-2-like [Benincasa hispida])

HSP 1 Score: 482.6 bits (1241), Expect = 2.1e-132
Identity = 254/266 (95.49%), Postives = 255/266 (95.86%), Query Frame = 0


Query: 1   MDQSER---QQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60
           MDQSER    QQSQQPAG VGAGQL YSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH
Sbjct: 1   MDQSERSQHHQQSQQPAGSVGAGQLPYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60

Query: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120
           QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAASQQP 240
           RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQ NMYG  +QQP
Sbjct: 181 RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQVNMYGGTAQQP 240

Query: 241 RPPMPFMPWPHTQTQQQQQTQQQSDA 264
           RP MPFMPWPHTQ QQQQQTQQQSDA
Sbjct: 241 RPSMPFMPWPHTQPQQQQQTQQQSDA 266

[Close]

BLAST of Spg006223 vs. NCBI nr
Match: XP_022157652.1 (nuclear transcription factor Y subunit C-2 [Momordica charantia] >XP_022157653.1 nuclear transcription factor Y subunit C-2 [Momordica charantia] >XP_022157654.1 nuclear transcription factor Y subunit C-2 [Momordica charantia] >XP_022157655.1 nuclear transcription factor Y subunit C-2 [Momordica charantia])

HSP 1 Score: 477.6 bits (1228), Expect = 6.8e-131
Identity = 252/266 (94.74%), Postives = 254/266 (95.49%), Query Frame = 0


Query: 1   MDQSER---QQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60
           MDQSER   QQQSQQPAGGVGAGQL YSNPY+T  MVASGTPAITIPPTQPPSSFSNSPH
Sbjct: 1   MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYETNLMVASGTPAITIPPTQPPSSFSNSPH 60

Query: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120
           QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAASQQP 240
           RDELKEEGLGITKASIPVVGSPADLPYYYVP QHPV A GMIMGKQLDQANMYG  +QQP
Sbjct: 181 RDELKEEGLGITKASIPVVGSPADLPYYYVPPQHPVAAPGMIMGKQLDQANMYGGTAQQP 240

Query: 241 RPPMPFMPWPHTQTQQQQQTQQQSDA 264
           RPPMPFMPWPHTQ QQQQQTQQQSDA
Sbjct: 241 RPPMPFMPWPHTQPQQQQQTQQQSDA 266

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BLAST of Spg006223 vs. NCBI nr
Match: XP_022988890.1 (nuclear transcription factor Y subunit C-2-like [Cucurbita maxima] >XP_022988891.1 nuclear transcription factor Y subunit C-2-like [Cucurbita maxima])

HSP 1 Score: 470.7 bits (1210), Expect = 8.3e-129
Identity = 252/269 (93.68%), Postives = 255/269 (94.80%), Query Frame = 0


Query: 1   MDQSER---QQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60
           MDQSER   QQQSQQ AGGVGAGQL YSNPYQTAPM ASGTPAITIPPTQ PSSFSNSPH
Sbjct: 1   MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPH 60

Query: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120
           QLA+QQAQHFH QQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  QLAFQQAQHFHQQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAASQQP 240
           RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPV ATGMIMGKQLDQANMYGA +QQP
Sbjct: 181 RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQP 240

Query: 241 RPPMPFMPWPHTQT---QQQQQTQQQSDA 264
           RPP+PFMPWPHTQ    QQQQQTQQQSDA
Sbjct: 241 RPPIPFMPWPHTQAQQQQQQQQTQQQSDA 269

[Close]

BLAST of Spg006223 vs. NCBI nr
Match: XP_022927856.1 (nuclear transcription factor Y subunit C-2-like [Cucurbita moschata] >XP_022927857.1 nuclear transcription factor Y subunit C-2-like [Cucurbita moschata] >KAG7022566.1 Nuclear transcription factor Y subunit C-2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 469.2 bits (1206), Expect = 2.4e-128
Identity = 251/269 (93.31%), Postives = 255/269 (94.80%), Query Frame = 0


Query: 1   MDQSER---QQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60
           MDQSER   QQQSQQ AGGVGAGQL YSNPYQTAPM ASGTPAITIPPTQ PSSFSNSPH
Sbjct: 1   MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPH 60

Query: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120
           QLA+QQAQHFH QQQQQQQQQLQ+FWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  QLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAASQQP 240
           RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPV ATGMIMGKQLDQANMYGA +QQP
Sbjct: 181 RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQP 240

Query: 241 RPPMPFMPWPHTQT---QQQQQTQQQSDA 264
           RPP+PFMPWPHTQ    QQQQQTQQQSDA
Sbjct: 241 RPPIPFMPWPHTQAQQQQQQQQTQQQSDA 269

[Close]

BLAST of Spg006223 vs. ExPASy Swiss-Prot
Match: Q8LCG7 (Nuclear transcription factor Y subunit C-2 OS=Arabidopsis thaliana OX=3702 GN=NFYC2 PE=1 SV=2)

HSP 1 Score: 258.1 bits (658), Expect = 1.1e-67
Identity = 150/213 (70.42%), Postives = 162/213 (76.06%), Query Frame = 0


Query: 1   MDQSERQQQSQQPAGGVGAGQLSYSNP--YQTAPMVASGTPAITIPPTQPPSSFSNSPHQ 60
           M+QSE  QQ QQ       G + Y  P  YQ+ P+                    N+   
Sbjct: 1   MEQSEEGQQQQQ------QGVMDYVPPHAYQSGPV--------------------NAASH 60

Query: 61  LAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRM 120
           +A+QQA HFHH  QQQQQQQLQMFWANQMQEIE TTDFKNH+LPLARIKKIMKADEDVRM
Sbjct: 61  MAFQQAHHFHHHHQQQQQQQLQMFWANQMQEIEHTTDFKNHTLPLARIKKIMKADEDVRM 120

Query: 121 ISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPR 180
           ISAEAPVIFAKACEMFILELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPR
Sbjct: 121 ISAEAPVIFAKACEMFILELTLRAWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPR 180

Query: 181 DELKEEGLGITKASIP-VVGSPADLPYYYVPSQ 211
           DELKEEGLG+TK +IP VVGSP   PYYY+  Q
Sbjct: 181 DELKEEGLGVTKGTIPSVVGSP---PYYYLQQQ 184

[Close]

BLAST of Spg006223 vs. ExPASy Swiss-Prot
Match: Q655V5 (Nuclear transcription factor Y subunit C-4 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYC4 PE=1 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 1.5e-64
Identity = 156/260 (60.00%), Postives = 181/260 (69.62%), Query Frame = 0


Query: 12  QPAGGVGAGQLSYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSP------HQLAYQQAQ 71
           QPA GV AG       Y+ A  V +  PA+    +QP  SF  +P      HQL YQQAQ
Sbjct: 8   QPAIGVVAGGSQVYPAYRPAATVPT-APAVIPAGSQPAPSFPANPDQLSAQHQLVYQQAQ 67

Query: 72  HFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPV 131
            FH Q QQQQQ+QLQ FWA ++ +IEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPV
Sbjct: 68  QFHQQLQQQQQRQLQQFWAERLVDIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPV 127

Query: 132 IFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEG 191
           IFAKACE+FILELTLRSW+HTEENKRRTLQKNDIAAAI+RTD++DFLVDI+PRD+LKEEG
Sbjct: 128 IFAKACEIFILELTLRSWMHTEENKRRTLQKNDIAAAITRTDMYDFLVDIVPRDDLKEEG 187

Query: 192 LGITKASIPVVGSPAD-LPY-YYVPSQHPVGATGMIMGKQLDQANMYGAASQQPRPPMPF 251
           +G+ +A +P +G PAD  PY YYVP Q   GA G+  G Q                  P 
Sbjct: 188 VGLPRAGLPPLGVPADSYPYGYYVPQQQVPGA-GIAYGGQQGH---------------PG 247

Query: 252 MPWPHTQTQQQQ-QTQQQSD 263
             W   Q QQ++   +QQSD
Sbjct: 248 YLWQDPQEQQEEPPAEQQSD 250

[Close]

BLAST of Spg006223 vs. ExPASy Swiss-Prot
Match: Q8L4B2 (Nuclear transcription factor Y subunit C-9 OS=Arabidopsis thaliana OX=3702 GN=NFYC9 PE=1 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 6.1e-58
Identity = 144/248 (58.06%), Postives = 175/248 (70.56%), Query Frame = 0


Query: 19  AGQLSY-SNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQ- 78
           +G ++Y +NPYQT PM    T A T+      +  +  P QLA+ Q     HQQQQQQQ 
Sbjct: 9   SGAMNYGTNPYQTNPM---STTAATV------AGGAAQPGQLAFHQI----HQQQQQQQL 68

Query: 79  -QQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFI 138
            QQLQ FW NQ +EIE+TTDFKNHSLPLARIKKIMKADEDVRMISAEAPV+FA+ACEMFI
Sbjct: 69  AQQLQAFWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFI 128

Query: 139 LELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIP 198
           LELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I + ++P
Sbjct: 129 LELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLGSIPRGTVP 188

Query: 199 VVGSPADLPYYYVPS-QHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQ 258
              + A  PY Y+P+   P+G  GM+MG      N  GA      PP P+M  P  Q Q 
Sbjct: 189 EAAA-AGYPYGYLPAGTAPIGNPGMVMG------NPGGA-----YPPNPYMGQPMWQQQA 231

Query: 259 QQQTQQQS 262
             Q  Q++
Sbjct: 249 PDQPDQEN 231

[Close]

BLAST of Spg006223 vs. ExPASy Swiss-Prot
Match: Q9SMP0 (Nuclear transcription factor Y subunit C-1 OS=Arabidopsis thaliana OX=3702 GN=NFYC1 PE=1 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 9.1e-54
Identity = 113/183 (61.75%), Postives = 136/183 (74.32%), Query Frame = 0


Query: 40  AITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNH 99
           A  IPP  P ++ S +    +Y       H   QQQQQQLQ+FW  Q QEIEQ  DFKNH
Sbjct: 12  AAGIPPPPPGTTISAAGGGASY-------HHLLQQQQQQLQLFWTYQRQEIEQVNDFKNH 71

Query: 100 SLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDI 159
            LPLARIKKIMKADEDVRMISAEAP++FAKACE+FILELT+RSW+H EENKRRTLQKNDI
Sbjct: 72  QLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDI 131

Query: 160 AAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVGATGMI 219
           AAAI+RTD+FDFLVDI+PRDE+K+E   +    + V  + + +PYYY P   P G  GM+
Sbjct: 132 AAAITRTDIFDFLVDIVPRDEIKDEA-AVLGGGMVVAPTASGVPYYYPPMGQPAGPGGMM 186

Query: 220 MGK 223
           +G+
Sbjct: 192 IGR 186

[Close]

BLAST of Spg006223 vs. ExPASy Swiss-Prot
Match: Q9ZVL3 (Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana OX=3702 GN=NFYC3 PE=1 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 2.9e-52
Identity = 140/256 (54.69%), Postives = 159/256 (62.11%), Query Frame = 0


Query: 8   QQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHF 67
           QQ Q  A   G      SNPYQT  M            T P  S   + HQ+        
Sbjct: 3   QQGQSSAMNYG------SNPYQTNAMT-----------TTPTGSDHPAYHQI-------- 62

Query: 68  HHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIF 127
           H QQQQQ  QQLQ FW  Q +EIE+TTDFKNHSLPLARIKKIMKADEDVRMISAEAPV+F
Sbjct: 63  HQQQQQQLTQQLQSFWETQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVF 122

Query: 128 AKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG 187
           A+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG
Sbjct: 123 ARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLG 182

Query: 188 ITKASIPVVGSPADLPYYYV-PSQHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPW 247
              A      + A  PY Y+ P   P+G  GM+MG         GA      PP P+M  
Sbjct: 183 GVGAE---AATAAGYPYGYLPPGTAPIGNPGMVMGNP-------GA-----YPPNPYMGQ 216

Query: 248 PHTQTQQQQQTQQQSD 263
           P    QQ    QQ  D
Sbjct: 243 P--MWQQPGPEQQDPD 216

[Close]

BLAST of Spg006223 vs. ExPASy TrEMBL
Match: A0A1S3C190 (nuclear transcription factor Y subunit C-2 OS=Cucumis melo OX=3656 GN=LOC103495470 PE=4 SV=1)

HSP 1 Score: 487.6 bits (1254), Expect = 3.2e-134
Identity = 256/265 (96.60%), Postives = 258/265 (97.36%), Query Frame = 0


Query: 1   MDQSER---QQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60
           MDQSER   QQQSQQPAGGVGAGQL YSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH
Sbjct: 1   MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60

Query: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120
           QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAASQQP 240
           RDELKEEGLGITKAS+PVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGA +QQP
Sbjct: 181 RDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQP 240

Query: 241 RPPMPFMPWPHTQTQQQQQTQQQSD 263
           RP MPFMPWPHTQ QQQQQTQQQSD
Sbjct: 241 RPSMPFMPWPHTQPQQQQQTQQQSD 265

[Close]

BLAST of Spg006223 vs. ExPASy TrEMBL
Match: A0A5A7SLP2 (Nuclear transcription factor Y subunit C-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G002960 PE=4 SV=1)

HSP 1 Score: 487.6 bits (1254), Expect = 3.2e-134
Identity = 256/265 (96.60%), Postives = 258/265 (97.36%), Query Frame = 0


Query: 1   MDQSER---QQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60
           MDQSER   QQQSQQPAGGVGAGQL YSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH
Sbjct: 1   MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60

Query: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120
           QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAASQQP 240
           RDELKEEGLGITKAS+PVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGA +QQP
Sbjct: 181 RDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQP 240

Query: 241 RPPMPFMPWPHTQTQQQQQTQQQSD 263
           RP MPFMPWPHTQ QQQQQTQQQSD
Sbjct: 241 RPSMPFMPWPHTQPQQQQQTQQQSD 265

[Close]

BLAST of Spg006223 vs. ExPASy TrEMBL
Match: A0A0A0K5U1 (Histone domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G051420 PE=4 SV=1)

HSP 1 Score: 487.6 bits (1254), Expect = 3.2e-134
Identity = 256/265 (96.60%), Postives = 258/265 (97.36%), Query Frame = 0


Query: 1   MDQSER---QQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60
           MDQSER   QQQSQQPAGGVGAGQL YSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH
Sbjct: 1   MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60

Query: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120
           QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAASQQP 240
           RDELKEEGLGITKAS+PVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGA +QQP
Sbjct: 181 RDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQP 240

Query: 241 RPPMPFMPWPHTQTQQQQQTQQQSD 263
           RP MPFMPWPHTQ QQQQQTQQQSD
Sbjct: 241 RPSMPFMPWPHTQPQQQQQTQQQSD 265

[Close]

BLAST of Spg006223 vs. ExPASy TrEMBL
Match: A0A6J1DV19 (nuclear transcription factor Y subunit C-2 OS=Momordica charantia OX=3673 GN=LOC111024312 PE=4 SV=1)

HSP 1 Score: 477.6 bits (1228), Expect = 3.3e-131
Identity = 252/266 (94.74%), Postives = 254/266 (95.49%), Query Frame = 0


Query: 1   MDQSER---QQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60
           MDQSER   QQQSQQPAGGVGAGQL YSNPY+T  MVASGTPAITIPPTQPPSSFSNSPH
Sbjct: 1   MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYETNLMVASGTPAITIPPTQPPSSFSNSPH 60

Query: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120
           QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAASQQP 240
           RDELKEEGLGITKASIPVVGSPADLPYYYVP QHPV A GMIMGKQLDQANMYG  +QQP
Sbjct: 181 RDELKEEGLGITKASIPVVGSPADLPYYYVPPQHPVAAPGMIMGKQLDQANMYGGTAQQP 240

Query: 241 RPPMPFMPWPHTQTQQQQQTQQQSDA 264
           RPPMPFMPWPHTQ QQQQQTQQQSDA
Sbjct: 241 RPPMPFMPWPHTQPQQQQQTQQQSDA 266

[Close]

BLAST of Spg006223 vs. ExPASy TrEMBL
Match: A0A6J1JII4 (nuclear transcription factor Y subunit C-2-like OS=Cucurbita maxima OX=3661 GN=LOC111486109 PE=4 SV=1)

HSP 1 Score: 470.7 bits (1210), Expect = 4.0e-129
Identity = 252/269 (93.68%), Postives = 255/269 (94.80%), Query Frame = 0


Query: 1   MDQSER---QQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60
           MDQSER   QQQSQQ AGGVGAGQL YSNPYQTAPM ASGTPAITIPPTQ PSSFSNSPH
Sbjct: 1   MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPH 60

Query: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120
           QLA+QQAQHFH QQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  QLAFQQAQHFHQQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAASQQP 240
           RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPV ATGMIMGKQLDQANMYGA +QQP
Sbjct: 181 RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQP 240

Query: 241 RPPMPFMPWPHTQT---QQQQQTQQQSDA 264
           RPP+PFMPWPHTQ    QQQQQTQQQSDA
Sbjct: 241 RPPIPFMPWPHTQAQQQQQQQQTQQQSDA 269

[Close]

BLAST of Spg006223 vs. TAIR 10
Match: AT1G56170.1 (nuclear factor Y, subunit C2 )

HSP 1 Score: 258.1 bits (658), Expect = 7.8e-69
Identity = 150/213 (70.42%), Postives = 162/213 (76.06%), Query Frame = 0


Query: 1   MDQSERQQQSQQPAGGVGAGQLSYSNP--YQTAPMVASGTPAITIPPTQPPSSFSNSPHQ 60
           M+QSE  QQ QQ       G + Y  P  YQ+ P+                    N+   
Sbjct: 1   MEQSEEGQQQQQ------QGVMDYVPPHAYQSGPV--------------------NAASH 60

Query: 61  LAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRM 120
           +A+QQA HFHH  QQQQQQQLQMFWANQMQEIE TTDFKNH+LPLARIKKIMKADEDVRM
Sbjct: 61  MAFQQAHHFHHHHQQQQQQQLQMFWANQMQEIEHTTDFKNHTLPLARIKKIMKADEDVRM 120

Query: 121 ISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPR 180
           ISAEAPVIFAKACEMFILELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPR
Sbjct: 121 ISAEAPVIFAKACEMFILELTLRAWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPR 180

Query: 181 DELKEEGLGITKASIP-VVGSPADLPYYYVPSQ 211
           DELKEEGLG+TK +IP VVGSP   PYYY+  Q
Sbjct: 181 DELKEEGLGVTKGTIPSVVGSP---PYYYLQQQ 184

[Close]

BLAST of Spg006223 vs. TAIR 10
Match: AT1G56170.2 (nuclear factor Y, subunit C2 )

HSP 1 Score: 258.1 bits (658), Expect = 7.8e-69
Identity = 150/213 (70.42%), Postives = 162/213 (76.06%), Query Frame = 0


Query: 1   MDQSERQQQSQQPAGGVGAGQLSYSNP--YQTAPMVASGTPAITIPPTQPPSSFSNSPHQ 60
           M+QSE  QQ QQ       G + Y  P  YQ+ P+                    N+   
Sbjct: 1   MEQSEEGQQQQQ------QGVMDYVPPHAYQSGPV--------------------NAASH 60

Query: 61  LAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRM 120
           +A+QQA HFHH  QQQQQQQLQMFWANQMQEIE TTDFKNH+LPLARIKKIMKADEDVRM
Sbjct: 61  MAFQQAHHFHHHHQQQQQQQLQMFWANQMQEIEHTTDFKNHTLPLARIKKIMKADEDVRM 120

Query: 121 ISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPR 180
           ISAEAPVIFAKACEMFILELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPR
Sbjct: 121 ISAEAPVIFAKACEMFILELTLRAWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPR 180

Query: 181 DELKEEGLGITKASIP-VVGSPADLPYYYVPSQ 211
           DELKEEGLG+TK +IP VVGSP   PYYY+  Q
Sbjct: 181 DELKEEGLGVTKGTIPSVVGSP---PYYYLQQQ 184

[Close]

BLAST of Spg006223 vs. TAIR 10
Match: AT1G08970.4 (nuclear factor Y, subunit C9 )

HSP 1 Score: 225.7 bits (574), Expect = 4.3e-59
Identity = 144/248 (58.06%), Postives = 175/248 (70.56%), Query Frame = 0


Query: 19  AGQLSY-SNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQ- 78
           +G ++Y +NPYQT PM    T A T+      +  +  P QLA+ Q     HQQQQQQQ 
Sbjct: 9   SGAMNYGTNPYQTNPM---STTAATV------AGGAAQPGQLAFHQI----HQQQQQQQL 68

Query: 79  -QQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFI 138
            QQLQ FW NQ +EIE+TTDFKNHSLPLARIKKIMKADEDVRMISAEAPV+FA+ACEMFI
Sbjct: 69  AQQLQAFWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFI 128

Query: 139 LELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIP 198
           LELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I + ++P
Sbjct: 129 LELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLGSIPRGTVP 188

Query: 199 VVGSPADLPYYYVPS-QHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQ 258
              + A  PY Y+P+   P+G  GM+MG      N  GA      PP P+M  P  Q Q 
Sbjct: 189 EAAA-AGYPYGYLPAGTAPIGNPGMVMG------NPGGA-----YPPNPYMGQPMWQQQA 231

Query: 259 QQQTQQQS 262
             Q  Q++
Sbjct: 249 PDQPDQEN 231

[Close]

BLAST of Spg006223 vs. TAIR 10
Match: AT1G08970.1 (nuclear factor Y, subunit C9 )

HSP 1 Score: 225.7 bits (574), Expect = 4.3e-59
Identity = 144/248 (58.06%), Postives = 175/248 (70.56%), Query Frame = 0


Query: 19  AGQLSY-SNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQ- 78
           +G ++Y +NPYQT PM    T A T+      +  +  P QLA+ Q     HQQQQQQQ 
Sbjct: 9   SGAMNYGTNPYQTNPM---STTAATV------AGGAAQPGQLAFHQI----HQQQQQQQL 68

Query: 79  -QQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFI 138
            QQLQ FW NQ +EIE+TTDFKNHSLPLARIKKIMKADEDVRMISAEAPV+FA+ACEMFI
Sbjct: 69  AQQLQAFWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFI 128

Query: 139 LELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIP 198
           LELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I + ++P
Sbjct: 129 LELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLGSIPRGTVP 188

Query: 199 VVGSPADLPYYYVPS-QHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQ 258
              + A  PY Y+P+   P+G  GM+MG      N  GA      PP P+M  P  Q Q 
Sbjct: 189 EAAA-AGYPYGYLPAGTAPIGNPGMVMG------NPGGA-----YPPNPYMGQPMWQQQA 231

Query: 259 QQQTQQQS 262
             Q  Q++
Sbjct: 249 PDQPDQEN 231

[Close]

BLAST of Spg006223 vs. TAIR 10
Match: AT1G08970.3 (nuclear factor Y, subunit C9 )

HSP 1 Score: 225.7 bits (574), Expect = 4.3e-59
Identity = 144/248 (58.06%), Postives = 175/248 (70.56%), Query Frame = 0


Query: 19  AGQLSY-SNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQ- 78
           +G ++Y +NPYQT PM    T A T+      +  +  P QLA+ Q     HQQQQQQQ 
Sbjct: 9   SGAMNYGTNPYQTNPM---STTAATV------AGGAAQPGQLAFHQI----HQQQQQQQL 68

Query: 79  -QQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFI 138
            QQLQ FW NQ +EIE+TTDFKNHSLPLARIKKIMKADEDVRMISAEAPV+FA+ACEMFI
Sbjct: 69  AQQLQAFWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFI 128

Query: 139 LELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIP 198
           LELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I + ++P
Sbjct: 129 LELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLGSIPRGTVP 188

Query: 199 VVGSPADLPYYYVPS-QHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQ 258
              + A  PY Y+P+   P+G  GM+MG      N  GA      PP P+M  P  Q Q 
Sbjct: 189 EAAA-AGYPYGYLPAGTAPIGNPGMVMG------NPGGA-----YPPNPYMGQPMWQQQA 231

Query: 259 QQQTQQQS 262
             Q  Q++
Sbjct: 249 PDQPDQEN 231

The following BLAST results are available for this feature:

BLAST of Spg006223 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136852.1	6.5e-134	96.60	nuclear transcription factor Y subunit C-2 [Cucumis sativus] >XP_008455266.1 PRE...	[more]
XP_038888434.1	2.1e-132	95.49	nuclear transcription factor Y subunit C-2-like [Benincasa hispida] >XP_03888843...	[more]
XP_022157652.1	6.8e-131	94.74	nuclear transcription factor Y subunit C-2 [Momordica charantia] >XP_022157653.1...	[more]
XP_022988890.1	8.3e-129	93.68	nuclear transcription factor Y subunit C-2-like [Cucurbita maxima] >XP_022988891...	[more]
XP_022927856.1	2.4e-128	93.31	nuclear transcription factor Y subunit C-2-like [Cucurbita moschata] >XP_0229278...	[more]

BLAST of Spg006223 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LCG7	1.1e-67	70.42	Nuclear transcription factor Y subunit C-2 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q655V5	1.5e-64	60.00	Nuclear transcription factor Y subunit C-4 OS=Oryza sativa subsp. japonica OX=39...	[more]
Q8L4B2	6.1e-58	58.06	Nuclear transcription factor Y subunit C-9 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9SMP0	9.1e-54	61.75	Nuclear transcription factor Y subunit C-1 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9ZVL3	2.9e-52	54.69	Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of Spg006223 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C190	3.2e-134	96.60	nuclear transcription factor Y subunit C-2 OS=Cucumis melo OX=3656 GN=LOC1034954...	[more]
A0A5A7SLP2	3.2e-134	96.60	Nuclear transcription factor Y subunit C-2 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A0A0K5U1	3.2e-134	96.60	Histone domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G051420 PE=...	[more]
A0A6J1DV19	3.3e-131	94.74	nuclear transcription factor Y subunit C-2 OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1JII4	4.0e-129	93.68	nuclear transcription factor Y subunit C-2-like OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Spg006223 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G56170.1	7.8e-69	70.42	nuclear factor Y, subunit C2	[more]
AT1G56170.2	7.8e-69	70.42	nuclear factor Y, subunit C2	[more]
AT1G08970.4	4.3e-59	58.06	nuclear factor Y, subunit C9	[more]
AT1G08970.1	4.3e-59	58.06	nuclear factor Y, subunit C9	[more]
AT1G08970.3	4.3e-59	58.06	nuclear factor Y, subunit C9	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 54..163 e-value: 5.8E-18 score: 65.5
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 61..178 e-value: 2.7E-48 score: 165.1
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 56..172
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 247..263
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 231..263
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..36
None	No IPR available	PANTHER	PTHR10252	HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED	coord: 6..256
None	No IPR available	PANTHER	PTHR10252:SF117	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-9	coord: 6..256

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg006223.1	Spg006223.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific
molecular_function	GO:0046982	protein heterodimerization activity