Spg006217 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg006217
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPolyamine-modulated factor 1/Kinetochore protein NNF
Locationscaffold4: 3870307 .. 3876638 (+)
RNA-Seq ExpressionSpg006217
SyntenySpg006217
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGATTTTCCCTTCGTTTCAGACCGGAATCGAAGGGGAATAGCAGCGCGAGGATAGAGCTTTCGTTGGAGAAGGAGGTGCTCGCCGGAGAGAAAGAAAACTGTGGGTCTGGTCTTTGCGCGCGGTGGGTCTTCGCTTCACGCGTGAGATGTAGTCGGAGGGAGGAAGATTGCGTGCGGTTCGTTGGAGAAGGGGATCGAGAGGGAGGGCTGAACCAAGGTGAGAAAAAAAAAAAAAAAAAAAAAAAAAAGTCGTCGGCGGCACCGTCAGGTGTGCTGGTGGTGGGTTAAAGAACTAGAGTAGGTTGAAGAAGAAGAAAAGAAGAAGGAGAGAAAAAGAAATAAAATTAAAAAAATAATAATATTTTATTATTTTAATATATATTATATTTTAAAAAATTCAAAAATAAATTTTTTAATAAAAAAATAGTGTCACGTCAGCAAACCGTTAGGTTTTAACGGAAAAATGGATGGAAGGACTAAAATGAAACTAAAATCAAACCTTAGAGATTAAATTATTGAGTTTGAAAACTCAGGGACCAAAATGAAATCTAACCCAAATCTCAGGGACTAAAAATGTATTTTTCCCTAAAAAATAATAGAACATTCCCAAAAAGAATTCCGGAGCACGGGTCGGCCCATCTGGCGATCGGTGCGGTCAACTGGTCCATATGGACCGATATAACCCATTTAGGATTCAATTTTAAAAAATTTTCAATATTGATGAAATATTACATAATTACCAAGTTTCAACTCTAAAAATAATCTCCCGCTAATTCCAGTAATCATAGTTCAGAATTCTCGGACTTCAATTTCTTCGTCAGTTCGTCTTTTCGTCGTCGCCGCCGTGACCCGCCGGCACTGACCAGAGTCAATTCAGCAACTCGCTCACTTGCTGCAACTTTCTAATTTCTTCTTCTTGTTGCTGTTGTGCCATTTCCGCAGAGTTAAATGTTAGCGTAGAATTTAGCAAGATAGGGTTGGGGATCGAAGTGGACAAACGTTTTGAACATGGAGAAGAAGCGCGAGATTGGTACTCCGGTGAGCTCAAGCCACATCGATCTGAAAAAGTCGTTCAGGCTCGCTGTTCGTTCTCTCCTCACTTCCTGTTCCAGGGAGGTATGCACGAAAGTTTCTGTAATGTGTATAATTTTTTGTTCTATAATATAGCAACTTTTTTTGTTCAAATTTGTTTTGGAATGGTGTGGAATTGGTCCTTAGGAATGGGAATTTGCTTTCCAAGTGGCAATTTGGTTATGAGAGGTATCTTTAGTTTACTTTTCTTTTGAAAGAGATGGTAAAATTTGTATAGTTGTGCTTTTTGTTACATAAATAAGGAGTTTCGGGAATGCTTTTCGAGATTTACGACTTCGGAGCAAGAATATCTTCATCGTCTTTTCATTCAGGTACTATTGTGCTGCTCTTTTATGTCTCCCCCCACCCTCTCAGGAAAGCTGAGTTAAAAGCAAACAAGCATCATAAGGACATAGTGTAATGCTTTAATTTAAGCTGGAGATCTTGAGTTTCTTGTAATATGATTCTAGGACGTTTTCTTGCGTGGATCTTTAATTTTGTTGCATGTGCAAATCCCGTCTTTCTTCAATGGTTAGCAGCATGATATTTACTTTACATGTTTAGAATTTACATATTTTTCTTATTGCTTTTAGTCTCCTTGGACATTGGAATAATGCACTTTTGTGTTCATCACACTTTCAGGTTATAACTTCTTTGCATGGAAACATAGAGGTAAATTTCCATTCAAGGTTTTGCTTCAGACTCCATTCTGATTTGATTTCGGGATTTCCTGTTTAGTGATGTGATCATGTCATTTCTTCATAGTCCATCTGATTCTTAATGACATAGTGCTAATTCTATGCTTAGGCTTGTTATTGTTCTACTTGGATGTTCTCATTACTTATTTGATTTCCTTCTCTAATTATATATATAATTCTATGCTATATATATAGCATGGAAGTTCTCATCTAGTGTTTTCACAATGTAAGATCCACTTTAAGACAACAAGCTTGTTACTCAACGGTAGCGGAGACGCATTACAGGCTATACGGCACTACAACGAGACACATGATTTAGAATAGATAGAATATACTTACATATTGTAAATAGAAGATAGGAATACATGATAACACAAAATTTGTTTGCATCTGTCTCTAAGATACAAGGAATGGAAAAAAGAAAAATTTCTCAAAAAATACGCAAAAAGGCGTTGAAGATCATCTTTCAGTAGAGTGCATATTGCCTCCGTTGCTAGGGTGCAAAAAGCAACCCACGCAATCACCTGGGTGAAGGTGCTTGCCATAGACTAGTGCTATTGGCGTTCAACTAACCCTGTCTTGAAATAAGTCTCACAATAAGCTTCTCTTCTTTTAAATTTATGTGGTCATCAATTTTAATTCTCTTTTTACATATTGTACTTTTGTTCGATAACACTACCATTTTTGAAATATACAGGACGAGTTTGAGTCATTATGTGTTGAAACACAGGTAATGCTCCTGGTTTGTTAACTAATTGTGATCATTTACTTTTAGCTCTTGCTTGCAAGCAACTTGAATGTGTCAGATTCGTTTTGTTTTTTTTTCTTGGGGGGGGGGGGGGGGGGGGGGTTAAGACCTTACGATCTGATCCACTTCAAAGGTTTTGCTGCCCTCTTCTTCTTCTTCTTCTTTTTCTTCTTTTTTTTTTAAATTTTTTTTTCCCATTATATATATTCGTATGTGAGTGATTCCTTGGGCTTGTTCAGTATGATTACAGGGAGGAACTTCATTGAAATTATTGATATATTAGTTTTGAAAGTCTCAACTAGTTTTCACAGTCTTGAATCTATCAGATGTCTTAGTCCAAATAGGCGATGGTGGGTTCCAATTAAAGAAGATAAAAGAACATGAATGATGACTGACGAGTAAGAAATAGTGGAAATATGTGAATTGATGACGATGGTTAAATGATAGGATCATAGAAATAGTAATCGACATACTGTAATGTTTCATTTTGTACAATGATAATTTTTCTTCTCAATTTCCAATTTCGTGTCACTTGTACTTTGTCTTCATTAACTGTACTGTATTAGGATTTGTTTGAAGTGATGATCTATTGCTAGTCATTTGTGTCATATGCAGGTGACTTTCCCAGTTTCCCTCTTCCATTTTGTCACTCTTTGCCTTGCATTTTAATAGTTTTGCATTATGCAGGTAGGACTTATACTTGATAATGTTGAACAACTTTTGGAAGAACAGGATCTAGACCCATTGTATTCTAAGAAGTAGGTATCTTATCTTCTGCTGGGAGATTATTTTCTGAATTCTTGGTCCAAATAAGTTAGGTTTTCTGATAGTTATGTCAATGATTTGATGTTATGATTATATAATTTTTAGATAAAGAATTTAAGCATCGCCTTATACATGAATTGAAATACATGATTGTATAATATTTGGAATGTTAACCAACCAAACCCTTCTGTGTTGGGACATATTACAAAGCATAAACTACCTTTGAACCATTAAAAATGTTACAGCCAAAAGCCAAAGCTTGAAACTGTACAAACGTTACAATTTAACCCCCTTTTCTAATTATGTAAAACTTAAAAACTGTAATATTAACCATGATAAAGGCCAATCTAAGCATAGTTCAATTGGTTAAGGCATTATATCCTCATTCAAAAGGTCAGAGGTGTGAATCCTCTAGCCCACCTGTTGATATTAAAAAAAAAAAAAAAAAACTTTTTTTTAAAGAAAAAATTCAATAACTACAATATTAACTAAGTCTCGAAAAATTAACTACAATATTAACTATGACTCCAATAAAGACATAACCCAAGCATAGACTTATCTTTGAGGTAAGGTGTTCGAGCCAGGAATGGTTAAGCTTTGATTTTTGTCAAGAATCAATTGCAAACAAACTTACATTACTTAAACACATCTCTACTCGGGTTTATGTCCTATTTGTTGCCATGGTTAATATTGTAGTTGTTGAATTTTAAATAAAATTTTCATGGTTAATATTATAGTTTTCAAATTTTATAGAATTTCAAAATATAGGTTAAATTGTAACAATTCAATAGTTCAATGGGTTTGATTGGAACACGTATAATGGTTCGGGGATACTTTGTTTGTTTTTCAATATGTTACTAACAGTTTTATAATTGTAGGGTACAATTGTAACAATTTTGTAAGTTTTGGGATAAATAAGAATGGATTAAATCGAAAGTTTGATAGTGTGATATAAGAACTCCTATAGCGGTGATGTATGCAATTTTCCCATCTTTTTCCGGGACGCGAAGTGGCCTATTAAAGTCGGGCTTTCTTCCGCCTTTACAGATTGAAGTTCTCAGGTGGAGTAGACAAATAACAATTTCTAATGCAGGACTAATATAATGGATATTGCTAATTATCAGTCCATGACAAAGAAGAATGAGATCCAGCACTTGAAGGACACGTTGAAAACGGTAAGCAACTTGTAACAGTAGCGAACTTCTCCATCTAAAACCAAACCACTTAATCAATACTATTACTTTTATTTTATAAGAATTTAGGATTTTCTTCCTTGGTAAACCGAACTATATCACCTCTTTTCCCTTTAGAAGAACAGAATTCTTAAAAGTCACGACAAAACCAGTAGTTTCTTATTCGATGAATCTTTTTTCTATCATAGATATTTGAAAAAAATTGAGTATGCATTTGCTCTGTTCCATCTCTAAGCACGCATATTAGCTATCAGGTAAAAAAGGCTCAATAATGCATTTGTCTTTGTACTCTTCCCTTTTTGCTTCTATTTCTTGGTTGTGTTTACCTATGTTACTCTCTTTACTATATTATACATCTTCCTTTACTATCCATTCCACTTTAGTTCCCCAAAACAATATGTGTTGTCTTTTCTTGTATGGTCAGTGCCACTGCCAACTTATGATGTGTGGCTTCTGAAAGAGTCATTACAGATATTACCAATTAATTCATCCACTAGAGTTCTTACCTAACAATTTCCTGACAAATAAAGTATGGAAGTTTTCACATGATCGAAACTTTCTCTAGGCTGAGGAACAGAACCGGCATATTCAAGCCTGTATCGATGTCCTCAGAAAAGGAGTGCAAGACGCCTCGGGCATGGCAGATGCTGTTGAGAAGGTGCAACTTTTATTTTCTTACCTTTTCCCACCTCTTCCAAATGGATAAATAATTTGAAAATGGTAGATAAAATACAAAATGGCTGACGAAGAGGAAACTTCCATTGGTTAGACTTTTCAATAGCCCAATTGGTAATTTGGTATTTTGAACTAAGCCTAAGAAATGGTAAGTCTGTGAAAGAAATGGTTGTTTTCTGATGAATTAAACAATCTGGAAGAGAAAATAAAACTCAGGATCTAGTTTCTAACCTCTATATCTAACCTGTAAATGTTCACAGCTAAGAAACAGATGCAATGCTTATGCAACTAATGGCGTCGACGGGACCTGCGATATGTAACTCATGCTTCACCAACTCGTTGTTGCCATCTGATTTGTTTTTATCACGTTAAATGCATCTGGGATTGGTCGATAACGACATCGGTATGTAATTTAGTAGATTATATTTTGGTAGCTTTATGTTAATTTCTCAACTTAGCTTAAGCTTTGTAATTCATATCAACAACTTTAGATGTTTCAAATTGTAGATGATGTTTCCTCTGTCAATTCAACCACTCTGTCTTGTATCAAAGAAATCTTCCATGGCTAAGTTGGAACGCTATATGGCCCTTGTTTTTCCTTTTCCACTCTCTCTCAAGAGACAACTTTAATGGAGATTGTACTCACAAATCAATGCCACAGATATCTAAAAGGAAAAAAAAAATAATGTTTACAGCCAAATTATGTGTAGGTATATGATCAGTCAGAATACTCATGGGCAGTGTTTCACAAGGACAACCTAACCAACAAATTTTTATTGATGCAAATATTTCGCTGAAGATTTGAATATCTTTTCTCATAATTTCATTTGTCAATATAAATCTTTTTAAGAAAAGGAATGGATTGTGTTTTTTTTTTTTTTTTTTTTTTTTTGGGTGGGTGAATTATTTCCACGAAATTGTATTGGTCAATCAAGTTAAGTGACTGGCATTTGAATTCCTCTTAATTGACAAATACCATTATTTTAATCCAAATTTCAATATATATATATTCAAAATTAATTTACAAAATTATATGAAAGAGGAGTGCACTTGTCTTAGATATTTCCATGCAATTTTATTAACCATTTTGTCAAAAACTCGAAGTACACGTCTCCATTTCTTATACTATCAAATAAATATTATACAAGAACCAACAACAAATCCAAGAGATATGCTGAT

mRNA sequence

ATGAGATTTTCCCTTCGTTTCAGACCGGAATCGAAGGGGAATAGCAGCGCGAGGATAGAGCTTTCGTTGGAGAAGGAGGTGCTCGCCGGAGAGAAAGAAAACTGTGGGTCTGGTCTTTGCGCGCGGTGGGTCTTCGCTTCACGCGTGAGATGTAGTCGGAGGGAGGAAGATTGCGTGCGGTTCGTTGGAGAAGGGGATCGAGAGGGAGGGCTGAACCAAGAGTTAAATGTTAGCGTAGAATTTAGCAAGATAGGGTTGGGGATCGAAGTGGACAAACGTTTTGAACATGGAGAAGAAGCGCGAGATTGGTACTCCGGTGAGCTCAAGCCACATCGATCTGAAAAAGTCGTTCAGGCTCGCTGTTCGTTCTCTCCTCACTTCCTGTTCCAGGGAGGAGTTTCGGGAATGCTTTTCGAGATTTACGACTTCGGAGCAAGAATATCTTCATCGTCTTTTCATTCAGGTTATAACTTCTTTGCATGGAAACATAGAGGTAATGCTCCTGGTTTGTTAACTAATTGTGATCATTTACTTTTAGCTCTTGCTTGCAAGCAACTTGAATGTGTCAGATTCGTAGGACTTATACTTGATAATGTTGAACAACTTTTGGAAGAACAGGATCTAGACCCATTGTATTCTAAGAAGACTAATATAATGGATATTGCTAATTATCAGTCCATGACAAAGAAGAATGAGATCCAGCACTTGAAGGACACGTTGAAAACGGCTGAGGAACAGAACCGGCATATTCAAGCCTGTATCGATGTCCTCAGAAAAGGAGTGCAAGACGCCTCGGGCATGGCAGATGCTGTTGAGAAGCTAAGAAACAGATGCAATGCTTATGCAACTAATGGCGTCGACGGGACCTGCGATATGTAA

Coding sequence (CDS)

ATGAGATTTTCCCTTCGTTTCAGACCGGAATCGAAGGGGAATAGCAGCGCGAGGATAGAGCTTTCGTTGGAGAAGGAGGTGCTCGCCGGAGAGAAAGAAAACTGTGGGTCTGGTCTTTGCGCGCGGTGGGTCTTCGCTTCACGCGTGAGATGTAGTCGGAGGGAGGAAGATTGCGTGCGGTTCGTTGGAGAAGGGGATCGAGAGGGAGGGCTGAACCAAGAGTTAAATGTTAGCGTAGAATTTAGCAAGATAGGGTTGGGGATCGAAGTGGACAAACGTTTTGAACATGGAGAAGAAGCGCGAGATTGGTACTCCGGTGAGCTCAAGCCACATCGATCTGAAAAAGTCGTTCAGGCTCGCTGTTCGTTCTCTCCTCACTTCCTGTTCCAGGGAGGAGTTTCGGGAATGCTTTTCGAGATTTACGACTTCGGAGCAAGAATATCTTCATCGTCTTTTCATTCAGGTTATAACTTCTTTGCATGGAAACATAGAGGTAATGCTCCTGGTTTGTTAACTAATTGTGATCATTTACTTTTAGCTCTTGCTTGCAAGCAACTTGAATGTGTCAGATTCGTAGGACTTATACTTGATAATGTTGAACAACTTTTGGAAGAACAGGATCTAGACCCATTGTATTCTAAGAAGACTAATATAATGGATATTGCTAATTATCAGTCCATGACAAAGAAGAATGAGATCCAGCACTTGAAGGACACGTTGAAAACGGCTGAGGAACAGAACCGGCATATTCAAGCCTGTATCGATGTCCTCAGAAAAGGAGTGCAAGACGCCTCGGGCATGGCAGATGCTGTTGAGAAGCTAAGAAACAGATGCAATGCTTATGCAACTAATGGCGTCGACGGGACCTGCGATATGTAA

Protein sequence

MRFSLRFRPESKGNSSARIELSLEKEVLAGEKENCGSGLCARWVFASRVRCSRREEDCVRFVGEGDREGGLNQELNVSVEFSKIGLGIEVDKRFEHGEEARDWYSGELKPHRSEKVVQARCSFSPHFLFQGGVSGMLFEIYDFGARISSSSFHSGYNFFAWKHRGNAPGLLTNCDHLLLALACKQLECVRFVGLILDNVEQLLEEQDLDPLYSKKTNIMDIANYQSMTKKNEIQHLKDTLKTAEEQNRHIQACIDVLRKGVQDASGMADAVEKLRNRCNAYATNGVDGTCDM
Homology
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BLAST of Spg006217 vs. NCBI nr
Match: KAG7015109.1 (hypothetical protein SDJN02_22742 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 166.4 bits (420), Expect = 3.7e-37
Identity = 84/102 (82.35%), Postives = 89/102 (87.25%), Query Frame = 0 

Query: 188 CVRFVGLILDNVEQLLEEQDLDPLYSKKTNIMDIANYQSMTKKNEIQHLKDTLKTAEEQN 247
           C   VGL+LDNVEQLLEEQDLDPLYSKKTNIM+IANY SMTKKNEIQHLKD LKTAEEQN
Sbjct: 82  CFMQVGLVLDNVEQLLEEQDLDPLYSKKTNIMEIANYLSMTKKNEIQHLKDMLKTAEEQN 141

Query: 248 RHIQACIDVLRKGVQDASGMADAVEKLRNRCNAYATNGVDGT 290
           RH+Q  ID+LRKGVQDAS M DAVEKLRNRC AYA +GV  T
Sbjct: 142 RHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRT 183

[Close]
BLAST of Spg006217 vs. NCBI nr
Match: XP_022931291.1 (uncharacterized protein LOC111437518 isoform X2 [Cucurbita moschata] >XP_023552811.1 uncharacterized protein LOC111810334 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 166.0 bits (419), Expect = 4.8e-37
Identity = 95/156 (60.90%), Postives = 109/156 (69.87%), Query Frame = 0 

Query: 141 YDFGARISSSSFHSGYNFFAWKHRGNAPGLLTNCDHLLLALACKQLE------CVRF-VG 200
           ++ G  +SSS      +F     +     LLT+C   ++      +E      CV   VG
Sbjct: 5   HEIGTPVSSSQIDLKKSF-----KLAVRSLLTSCSREVITSLHGNIEDEFESLCVETQVG 64

Query: 201 LILDNVEQLLEEQDLDPLYSKKTNIMDIANYQSMTKKNEIQHLKDTLKTAEEQNRHIQAC 260
           L+LDNVEQLLEEQDLDPLYSKKTNIM+IANY SMTKKNEIQHLKD LKTAEEQNRH+Q  
Sbjct: 65  LVLDNVEQLLEEQDLDPLYSKKTNIMEIANYLSMTKKNEIQHLKDMLKTAEEQNRHVQGR 124

Query: 261 IDVLRKGVQDASGMADAVEKLRNRCNAYATNGVDGT 290
           ID+LRKGVQDAS M DAVEKLRNRC AYA +GV  T
Sbjct: 125 IDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRT 155

[Close]
BLAST of Spg006217 vs. NCBI nr
Match: XP_023527503.1 (uncharacterized protein LOC111790708 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 166.0 bits (419), Expect = 4.8e-37
Identity = 84/100 (84.00%), Postives = 91/100 (91.00%), Query Frame = 0 

Query: 192 VGLILDNVEQLLEEQDLDPLYSKKTNIMDIANYQSMTKKNEIQHLKDTLKTAEEQNRHIQ 251
           VG +LDNVEQLLEEQDLDPLYSKKTNIMDIANY SMT+KNEIQHLKD LKT+EEQNRHIQ
Sbjct: 81  VGRVLDNVEQLLEEQDLDPLYSKKTNIMDIANYLSMTRKNEIQHLKDMLKTSEEQNRHIQ 140

Query: 252 ACIDVLRKGVQDASGMADAVEKLRNRCNAYATNGVDGTCD 292
           A IDVL+KGV+DASGMADAVEKLR RC A  T+G +GTCD
Sbjct: 141 ARIDVLKKGVEDASGMADAVEKLRIRCRASPTDGDNGTCD 180

[Close]
BLAST of Spg006217 vs. NCBI nr
Match: XP_022985333.1 (uncharacterized protein LOC111483373 isoform X2 [Cucurbita maxima])

HSP 1 Score: 165.6 bits (418), Expect = 6.3e-37
Identity = 95/156 (60.90%), Postives = 109/156 (69.87%), Query Frame = 0 

Query: 141 YDFGARISSSSFHSGYNFFAWKHRGNAPGLLTNCDHLLLALACKQLE------CVRF-VG 200
           ++ G  +SSS      +F     +     LLT+C   ++      +E      CV   VG
Sbjct: 5   HEIGTPVSSSQIDLKKSF-----KLAVRSLLTSCSRGVITSLHGNIEDEFESLCVETKVG 64

Query: 201 LILDNVEQLLEEQDLDPLYSKKTNIMDIANYQSMTKKNEIQHLKDTLKTAEEQNRHIQAC 260
           L+LDNVEQLLEEQDLDPLYSKKTNIM+IANY SMTKKNEIQHLKD LKTAEEQNRH+Q  
Sbjct: 65  LVLDNVEQLLEEQDLDPLYSKKTNIMEIANYLSMTKKNEIQHLKDMLKTAEEQNRHVQGR 124

Query: 261 IDVLRKGVQDASGMADAVEKLRNRCNAYATNGVDGT 290
           ID+LRKGVQDAS M DAVEKLRNRC AYA +GV  T
Sbjct: 125 IDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRT 155

[Close]
BLAST of Spg006217 vs. NCBI nr
Match: XP_022931290.1 (uncharacterized protein LOC111437518 isoform X1 [Cucurbita moschata] >XP_023552810.1 uncharacterized protein LOC111810334 isoform X1 [Cucurbita pepo subsp. pepo] >KAG6577107.1 hypothetical protein SDJN03_24681, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 164.9 bits (416), Expect = 1.1e-36
Identity = 83/98 (84.69%), Postives = 88/98 (89.80%), Query Frame = 0 

Query: 192 VGLILDNVEQLLEEQDLDPLYSKKTNIMDIANYQSMTKKNEIQHLKDTLKTAEEQNRHIQ 251
           VGL+LDNVEQLLEEQDLDPLYSKKTNIM+IANY SMTKKNEIQHLKD LKTAEEQNRH+Q
Sbjct: 81  VGLVLDNVEQLLEEQDLDPLYSKKTNIMEIANYLSMTKKNEIQHLKDMLKTAEEQNRHVQ 140

Query: 252 ACIDVLRKGVQDASGMADAVEKLRNRCNAYATNGVDGT 290
             ID+LRKGVQDAS M DAVEKLRNRC AYA +GV  T
Sbjct: 141 GRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRT 178

[Close]
BLAST of Spg006217 vs. ExPASy TrEMBL
Match: A0A6J1ETA0 (uncharacterized protein LOC111437518 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111437518 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 2.3e-37
Identity = 95/156 (60.90%), Postives = 109/156 (69.87%), Query Frame = 0 

Query: 141 YDFGARISSSSFHSGYNFFAWKHRGNAPGLLTNCDHLLLALACKQLE------CVRF-VG 200
           ++ G  +SSS      +F     +     LLT+C   ++      +E      CV   VG
Sbjct: 5   HEIGTPVSSSQIDLKKSF-----KLAVRSLLTSCSREVITSLHGNIEDEFESLCVETQVG 64

Query: 201 LILDNVEQLLEEQDLDPLYSKKTNIMDIANYQSMTKKNEIQHLKDTLKTAEEQNRHIQAC 260
           L+LDNVEQLLEEQDLDPLYSKKTNIM+IANY SMTKKNEIQHLKD LKTAEEQNRH+Q  
Sbjct: 65  LVLDNVEQLLEEQDLDPLYSKKTNIMEIANYLSMTKKNEIQHLKDMLKTAEEQNRHVQGR 124

Query: 261 IDVLRKGVQDASGMADAVEKLRNRCNAYATNGVDGT 290
           ID+LRKGVQDAS M DAVEKLRNRC AYA +GV  T
Sbjct: 125 IDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRT 155

[Close]
BLAST of Spg006217 vs. ExPASy TrEMBL
Match: A0A6J1JDB6 (uncharacterized protein LOC111483373 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111483373 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 3.1e-37
Identity = 95/156 (60.90%), Postives = 109/156 (69.87%), Query Frame = 0 

Query: 141 YDFGARISSSSFHSGYNFFAWKHRGNAPGLLTNCDHLLLALACKQLE------CVRF-VG 200
           ++ G  +SSS      +F     +     LLT+C   ++      +E      CV   VG
Sbjct: 5   HEIGTPVSSSQIDLKKSF-----KLAVRSLLTSCSRGVITSLHGNIEDEFESLCVETKVG 64

Query: 201 LILDNVEQLLEEQDLDPLYSKKTNIMDIANYQSMTKKNEIQHLKDTLKTAEEQNRHIQAC 260
           L+LDNVEQLLEEQDLDPLYSKKTNIM+IANY SMTKKNEIQHLKD LKTAEEQNRH+Q  
Sbjct: 65  LVLDNVEQLLEEQDLDPLYSKKTNIMEIANYLSMTKKNEIQHLKDMLKTAEEQNRHVQGR 124

Query: 261 IDVLRKGVQDASGMADAVEKLRNRCNAYATNGVDGT 290
           ID+LRKGVQDAS M DAVEKLRNRC AYA +GV  T
Sbjct: 125 IDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRT 155

[Close]
BLAST of Spg006217 vs. ExPASy TrEMBL
Match: A0A6J1J4K9 (uncharacterized protein LOC111483373 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483373 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 5.2e-37
Identity = 83/98 (84.69%), Postives = 88/98 (89.80%), Query Frame = 0 

Query: 192 VGLILDNVEQLLEEQDLDPLYSKKTNIMDIANYQSMTKKNEIQHLKDTLKTAEEQNRHIQ 251
           VGL+LDNVEQLLEEQDLDPLYSKKTNIM+IANY SMTKKNEIQHLKD LKTAEEQNRH+Q
Sbjct: 81  VGLVLDNVEQLLEEQDLDPLYSKKTNIMEIANYLSMTKKNEIQHLKDMLKTAEEQNRHVQ 140

Query: 252 ACIDVLRKGVQDASGMADAVEKLRNRCNAYATNGVDGT 290
             ID+LRKGVQDAS M DAVEKLRNRC AYA +GV  T
Sbjct: 141 GRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRT 178

[Close]
BLAST of Spg006217 vs. ExPASy TrEMBL
Match: A0A6J1EZ15 (uncharacterized protein LOC111437518 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437518 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 5.2e-37
Identity = 83/98 (84.69%), Postives = 88/98 (89.80%), Query Frame = 0 

Query: 192 VGLILDNVEQLLEEQDLDPLYSKKTNIMDIANYQSMTKKNEIQHLKDTLKTAEEQNRHIQ 251
           VGL+LDNVEQLLEEQDLDPLYSKKTNIM+IANY SMTKKNEIQHLKD LKTAEEQNRH+Q
Sbjct: 81  VGLVLDNVEQLLEEQDLDPLYSKKTNIMEIANYLSMTKKNEIQHLKDMLKTAEEQNRHVQ 140

Query: 252 ACIDVLRKGVQDASGMADAVEKLRNRCNAYATNGVDGT 290
             ID+LRKGVQDAS M DAVEKLRNRC AYA +GV  T
Sbjct: 141 GRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRT 178

[Close]
BLAST of Spg006217 vs. ExPASy TrEMBL
Match: A0A6J1IY03 (uncharacterized protein LOC111481654 OS=Cucurbita maxima OX=3661 GN=LOC111481654 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.2e-36
Identity = 83/100 (83.00%), Postives = 91/100 (91.00%), Query Frame = 0 

Query: 192 VGLILDNVEQLLEEQDLDPLYSKKTNIMDIANYQSMTKKNEIQHLKDTLKTAEEQNRHIQ 251
           VG +LDNVEQLLEEQDLDPLYSKKTNIMDIA+Y S+TKKNEIQHLKD LKT+EEQNRHIQ
Sbjct: 81  VGRVLDNVEQLLEEQDLDPLYSKKTNIMDIADYLSITKKNEIQHLKDMLKTSEEQNRHIQ 140

Query: 252 ACIDVLRKGVQDASGMADAVEKLRNRCNAYATNGVDGTCD 292
           A IDVL+KGV+DASGMADAVEKLR RC A A +G +GTCD
Sbjct: 141 ARIDVLKKGVEDASGMADAVEKLRIRCRASAADGDNGTCD 180

[Close]
BLAST of Spg006217 vs. TAIR 10
Match: AT4G19350.1 (embryo defective 3006 )

HSP 1 Score: 87.8 bits (216), Expect = 1.6e-17
Identity = 49/90 (54.44%), Postives = 62/90 (68.89%), Query Frame = 0 

Query: 192 VGLILDNVEQLLEEQDLDPLYSKKTNIMDIANYQSMTKKNEIQHLKDTLKTAEEQNRHIQ 251
           VG ILD VE+L+EEQ LDPL+S KT++M IA   + +KKNEIQ L   L+ AEEQNR  +
Sbjct: 81  VGPILDTVEELVEEQSLDPLFSDKTDVMAIAYDLTTSKKNEIQKLTVLLQRAEEQNRQKE 140

Query: 252 ACIDVLRKGVQDASGMADAVEKLRNRCNAY 282
           A I +L+K  QD SG AD +EKL    + Y
Sbjct: 141 ARISMLKKQTQDLSGTADRIEKLNAGVSGY 170

The following BLAST results are available for this feature:
BLAST of Spg006217 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7015109.13.7e-3782.35hypothetical protein SDJN02_22742 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022931291.14.8e-3760.90uncharacterized protein LOC111437518 isoform X2 [Cucurbita moschata] >XP_0235528... [more]
XP_023527503.14.8e-3784.00uncharacterized protein LOC111790708 [Cucurbita pepo subsp. pepo][more]
XP_022985333.16.3e-3760.90uncharacterized protein LOC111483373 isoform X2 [Cucurbita maxima][more]
XP_022931290.11.1e-3684.69uncharacterized protein LOC111437518 isoform X1 [Cucurbita moschata] >XP_0235528... [more]
BLAST of Spg006217 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg006217 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1ETA02.3e-3760.90uncharacterized protein LOC111437518 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1JDB63.1e-3760.90uncharacterized protein LOC111483373 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1J4K95.2e-3784.69uncharacterized protein LOC111483373 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1EZ155.2e-3784.69uncharacterized protein LOC111437518 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1IY031.2e-3683.00uncharacterized protein LOC111481654 OS=Cucurbita maxima OX=3661 GN=LOC111481654... [more]
BLAST of Spg006217 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G19350.11.6e-1754.44embryo defective 3006 [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 226..253
NoneNo IPR availablePANTHERPTHR15459:SF3POLYAMINE-MODULATED FACTOR 1coord: 192..283
IPR007128Nuclear MIS12/MIND complex subunit PMF1/Nnf1PANTHERPTHR15459POLYAMINE-MODULATED FACTOR 1coord: 192..283

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg006217.1Spg006217.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007049 cell cycle
biological_process GO:0051301 cell division
biological_process GO:0007059 chromosome segregation
cellular_component GO:0000818 nuclear MIS12/MIND complex