Spg006211 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATTGAAGAGACGTAATTGGCGATGTCAAAGTATGAATTTCCGAGGCTTCCACGGGCAGATATTGCATTGCTACTAGCACAGTGTCAAATTGCTGCTGTAACAGAGCGGGACCTTCTTCACCCGTCACCAGATTTGGTTTCAGATCTTTACACACGTTTAATGATCTACCTTGACTTGCTCCATGAGTAATTCCTCTGCTTATGGCATTTCCTTTTAACAAGTATTTGAACTGTTTTTTTGAAAGGAAGGAGAAAGAGAAAAGTTTATTTATGTGTTACTATGTCAGTCATCATTCACTTCTTTCAACGTTTTGATATCTGTGAGGTTTATAGCGTGGATTTGATGTCAAACAACTTTACTTGGTCAACTTTTTATTTCTTGCTTCTAAGAAAATTTAATATTGCATAGAATAGTAGGATAATGGTTTTATCTCTCCGTTTGTTGATAATAGGAATTGGTGTGACCCATAATTCACGTTTTGTTTCCTAGAGAATTCAAATTATGGAAGTTTTTTCTTCTCTTTGGAAGAGTAAAATACCAAAGAAGGTCAAAGTCTTTGTGCGGTAGGTTTTGCACGGATTTGTCTTTATAGGTGTCTATTTCCTGACCTTTTGGTAATTAGGAGTTTGGTTTGGTCCTCTTGGATTGAAGTCCGTTTCTTTAGCTAGTGTTTGAACTCTTTTTTGTCTATTTCCTGACCTTTTGGTAATTAGGAGTTTGGTTTGGTCCTCTTGGATTGAAGTCCGTTTCTTTAGCTAGTGTTTGAACTCTTTTTTGTGGGCTTATTGTTGTATGCTCTTGTACATTCTTTCATTTTTTCAATGAAAGCTCGGTTTCTTACTTAAAAAAATATCCATGTGTTCATGAATTTCCCTTACTCCTTTTCCATTCTAGATCTTTGGAGTGTCATACTGTGAACTTGTTTATTTCTCTATGCTTAGAATCCTTTTTAAGAAAGGTTATATTTCAATTTTGTTCGTTATTTGTGCAGGGAAGACCAAGGACAAGTTGAGTTTGCTGCCTTGGATCAGCTCGAGAACCCTGATCTGCATATGGATTCAGTTCGGATAATGAAGTTGCACAACAGAATAAAGCATGTCATTGCCTCTCTTGACTGTCCAAAAAAGTTTACATTGAAAGATTTGATAAAACCTGAAGGAGATAGGACCGAAATTTTCCTTAGTGCAATGTTGAACTTTTGCATTCACAAGTACGAACCTTATCTTCTTCTTCTCTATGGTCGTCACTTTCTCTTTACGAGAAAAAAAAAAAGAACTAGTGTAACAAACTATTAGTTTGACCTCGAAGGTCTTTATGGGTTTATCAGCTAACTTAGGGTGTAGTATCTCAACCAAGGAATTTCTACTCAATTCTCAGCTTATTATTGGGATTCTAGTCAATTGTAAATAATCGTAAGTAAACATCTCAATTAAATGAGTTTATTATTTAACTTACTACTTATGTTTGCCCCATTTATATTAGTTAGCTCATCACATTATATTGAATGAAAGCGCCAGCTTCTTGCTTATTGTTAATTTGATCATAGGCTTAATTAGATGTTCTTGTAGTTCAATGGCATTGTGCACAAGTCAACATATTCTGATAAATTTTCTAGCTTGTCACGGTAGGTTTAGTTTCTTTATGATTGGATGAATGAGATGAAGTAACAAAAACTTATCACTTCAATTTATTATATTTTATTGTTGTCATGCTTTCTTATTTGTAATACATCCCACGGGCTGGGACACAGCTCCATGCTTTCGTGTTGGTAATTACATCCAAAAGCTCAATTTTCTTATTGAATAGGCAGGGACTTCCCTACAGGGTGCTTTGATAAGGATATGTATTATTTTATTGTCTGTAGATGTTGCATGATATATATCTATCGAAATATGGTTTTTCATAAAAGAATAGATAGATTTATATCGACTCAGTTATGACTCTTGTATTTCCATTTGAAGAGATGCCAAAATCACCCTCCATACTCCAGTTATGGATGAGCTGAGTACTCTTGGTGACCAGCAAAGGGAATGGGAGGTTAAGATTTCTCAGGTATTTAGATCTCATCCCTTTTTCATTTTTATTTAATATTATTTTATTTTAAATTCGAAAAAGGGTGGACATATATATTTCTTTTTCCATTTGGCTGAACTTGTGTGTTACAGTTGAATGCAGAGATCGCAGAGTACAATGAAGCAAGAGAAAGGGAAATACCTTTTGTTCAAGAGATTGATGCTAAAGTGAAAGAACTACAACAGACTATTGGAGGACTTAACAATCAGCAGATGTCATTGCGTGCTTCTATCCGAAAGTTGAAAGACAAAGCTGGAGAAATGGATGAGAAGGTTAGATTATTAACAACTTTTTCTTTTTTCTATTTCTCTTTTTGGGATAGGGAACAGATACTTGTATATTCCTTGTTGAGAGAAGTTCCTCAAGTCGAACCATTTCTTCACAAACATTAACATAGCAGTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGAAATGGTTGATGATAAGGTGTGATCAGATTGACACTAATCATAGCCATCTTGCTTTAACACATTTATAAAGTTTTCAAACCAAGCCCGAGGTGATTGTTTTAGGCTAAGAAGCACGGACACTTTAGTTTGGCTAGCGTGTCCGTGTCGGACACGTGTCGGACACTTGGACACTTGTTGGACACGTATCGGACACTTGTTAGCACAATTGATATGTGGCAAACACTAGTTGTAGGTTCATTTCAAACCCTTGTTATGTATACTAAATAGACACAATGCTTAAATGACAAAAATAATAAATTTTATAAGTAAAATACATTAAATTCATTTTTTCAAGCATACAAATGCATAAACTAATTGATTTTGAATTTCCTTCTGGGATAAAAACAATATATATTTTAAAAAATGTATATTTTTCTAAATGTGTCCTTGCCGTGTCCGTGTCCTAGATTTAAAAAAAAATAACGTGTCACCGTGTCCGTGTCGTGTCGTATCCGTGTCTCGTGTCCGTATCCGTGCTTCTTAGGTCTTAGGCTATAAAAAGGTTTCTTGAGTTTACATTCCTTTCCTTTAGTATAATGATCCTCAAATCTAAGAGATGTATCCATATGCATATCTTGTATTGGCCAACATTAAAAATGTATTTTTTACATTGAATAGAAATAGTAGTCAATCTAAATATGTTACAATAGAGAGGTACCCAAATAATATTTAACTCAGTTGTTGGAGCAAACGTTTCCTAATAGTCCATCGCTTAAGCTTGGATGAATCCTTTAACCACAATACAAAAGGGTCCAATATTAGAGTTGAAAAAATCATGAGCTTTATTAGGGACTTATTTGACACAAATCTAAAAGTATAGAGATTAAATTTGTAATTTAACTTTAAATTTAAAATGTTTAAGAGGTCACTCCAACATGATGAGGTGTAAGGGCATTATCTCGTAAGGTAAGAGGATAATAATTGTTAGAATCTAGAACAATCACCAATGCTTTATTGCTTGTGTAACAATCGGGTGGTGCCAAATTCCTTGCAAGTCAATGAGGAAGAGGAGTTTTTTTTGGGTGGAGTAATCCTTTTCTTATGTTTTAGTTTTAAAGTTCAGGGGTAGAAAGATCAACATGAGGTATTAAGTTCCTTTTGATGTTTAAAAAAGAAACTGGGATATATATTAATGAAAAGACCCATACCAAAAAGGGGAGATGAGTTATCTCTACATGATCAATGGGTTGAAAAGGATTTCAAATTGGAAAAGATATCCAATAGCTCAAAATTACAGAAATATTTAGAGGAAGATCAGCAAACGGAGGAGAAAAGCCTAGATACAAAAAACATTCATAGCAAGATTTAACCCTTGGAGGCCTGTGAGGTATTCATCCTGACGTTTAGAATTTGGTTTAGTTGTATGGGCACCTTTTGAAACTTATAAGAAACAATCTCTCGTTGCCTTTGTGGGGAATGACGAGTGGGTTCATGGGGAGAATATTTTCCTTCAAAGAGGCCCCCATTGTTCGTAGTTTCTACTTCATTCTATAGCCCTCTCGAAAGCTCTTTGATCTTCTCAAATATTCTTTCGAGGGGACCTCTTGTTTAATTTTTGCTGTTGTAGAGCTCTTAGTAGTCAAGAGATAGAGGACTTAGAGACTCCCTCTAATAACCAAAATTTCTATCCTAAATGTAGGGAGCGGTCGTTTGTGGTCACTTGAGCCTTTGGAAATCTTTTCTGATTTCTTTTGCGAGTCTTTTTTTTTCCCTCTCTGTGGACGCTTACAAACTTGAAGAAGATTATTCTTTTCTTGGCTCATAGCCTTGGAGAGGATTAATATCATAGAATTTTTGCTGATTCTTCGATTTTGTTCTTGACCCGAACTGGTGTGTCTAGTGTTTGTGTGATGTAGTCTTGGTAGTTGGTCCTTTTTTCTTAACCCTATGTAGTTAATTGTCTTTTACTGCCTTTCTTTTATTTGAATTAGTTTGCTTTTATTGACCAGCTTTTTACCATGTGGTAAATGGCTTTAGTTAGGCGGTTAAGTACATAAGACTTTATTAGGGTAACTTCCAGCTATATATATGGCTGGTGTTACTTTTTTTCAATTAATAAAAAAACTTTATAGAATCTTGAAGATTTGTGTGAGGGTACTAGTATGATATATTTGGGGAATAGAATTAGAAGGGTAGTAAGGGTATAATAGTAAATAGCTAGGGAGCCTTGGTTGTGTCTTGATTATAAATAGGGAAGTTAGGAAGCCTTAGAGGTGTGGAGAATTTTGGGTATAGTCTCATAGTGAGGCTTTGGGAGAGAGTTAGCCCTCTCGAAAGGCTATTGGTTATATTGTAACTTCTTTTGATATTGCAATATATAGTATTTGGTGTTTTCTTAGTTTGGATACCTAACAAATTGGTATCAGAGCACGTTCGTCCTAGAGCAAGCATCAACTGCAACCGCAATGGAGTTTGCTCGTTGGAACTACACTGGGAAACAATGCAGCACAAGATCAAGGAAATGCAACAAGGGATCAAGAAAGTGCAACAAATCTTAG ATGTCAAAGTATGAATTTCCGAGGCTTCCACGGGCAGATATTGCATTGCTACTAGCACAGTGTCAAATTGCTGCTGTAACAGAGCGGGACCTTCTTCACCCGTCACCAGATTTGGTTTCAGATCTTTACACACGTTTAATGATCTACCTTGACTTGCTCCATGAGGAAGACCAAGGACAAGTTGAGTTTGCTGCCTTGGATCAGCTCGAGAACCCTGATCTGCATATGGATTCAGTTCGGATAATGAAGTTGCACAACAGAATAAAGCATGTCATTGCCTCTCTTGACTGTCCAAAAAAGTTTACATTGAAAGATTTGATAAAACCTGAAGGAGATAGGACCGAAATTTTCCTTAGTGCAATGTTGAACTTTTGCATTCACAAAGATGCCAAAATCACCCTCCATACTCCAGTTATGGATGAGCTGAGTACTCTTGGTGACCAGCAAAGGGAATGGGAGGTTAAGATTTCTCAGTTGAATGCAGAGATCGCAGAGTACAATGAAGCAAGAGAAAGGGAAATACCTTTTGTTCAAGAGATTGATGCTAAAGTGAAAGAACTACAACAGACTATTGGAGGACTTAACAATCAGCAGATGTCATTGCGTGCTTCTATCCGAAAGTTGAAAGACAAAGCTGGAGAAATGGATGAGAAGAGCACGTTCGTCCTAGAGCAAGCATCAACTGCAACCGCAATGGAGTTTGCTCGTTGGAACTACACTGGGAAACAATGCAGCACAAGATCAAGGAAATGCAACAAGGGATCAAGAAAGTGCAACAAATCTTAG ATGTCAAAGTATGAATTTCCGAGGCTTCCACGGGCAGATATTGCATTGCTACTAGCACAGTGTCAAATTGCTGCTGTAACAGAGCGGGACCTTCTTCACCCGTCACCAGATTTGGTTTCAGATCTTTACACACGTTTAATGATCTACCTTGACTTGCTCCATGAGGAAGACCAAGGACAAGTTGAGTTTGCTGCCTTGGATCAGCTCGAGAACCCTGATCTGCATATGGATTCAGTTCGGATAATGAAGTTGCACAACAGAATAAAGCATGTCATTGCCTCTCTTGACTGTCCAAAAAAGTTTACATTGAAAGATTTGATAAAACCTGAAGGAGATAGGACCGAAATTTTCCTTAGTGCAATGTTGAACTTTTGCATTCACAAAGATGCCAAAATCACCCTCCATACTCCAGTTATGGATGAGCTGAGTACTCTTGGTGACCAGCAAAGGGAATGGGAGGTTAAGATTTCTCAGTTGAATGCAGAGATCGCAGAGTACAATGAAGCAAGAGAAAGGGAAATACCTTTTGTTCAAGAGATTGATGCTAAAGTGAAAGAACTACAACAGACTATTGGAGGACTTAACAATCAGCAGATGTCATTGCGTGCTTCTATCCGAAAGTTGAAAGACAAAGCTGGAGAAATGGATGAGAAGAGCACGTTCGTCCTAGAGCAAGCATCAACTGCAACCGCAATGGAGTTTGCTCGTTGGAACTACACTGGGAAACAATGCAGCACAAGATCAAGGAAATGCAACAAGGGATCAAGAAAGTGCAACAAATCTTAG MSKYEFPRLPRADIALLLAQCQIAAVTERDLLHPSPDLVSDLYTRLMIYLDLLHEEDQGQVEFAALDQLENPDLHMDSVRIMKLHNRIKHVIASLDCPKKFTLKDLIKPEGDRTEIFLSAMLNFCIHKDAKITLHTPVMDELSTLGDQQREWEVKISQLNAEIAEYNEAREREIPFVQEIDAKVKELQQTIGGLNNQQMSLRASIRKLKDKAGEMDEKSTFVLEQASTATAMEFARWNYTGKQCSTRSRKCNKGSRKCNKS Homology
BLAST of Spg006211 vs. NCBI nr
Match: KAG6588803.1 (Kinetochore protein NUF2-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 401.0 bits (1029), Expect = 8.0e-108 Identity = 203/229 (88.65%), Postives = 216/229 (94.32%), Query Frame = 0
BLAST of Spg006211 vs. NCBI nr
Match: XP_022927739.1 (probable kinetochore protein NUF2 [Cucurbita moschata] >XP_022927740.1 probable kinetochore protein NUF2 [Cucurbita moschata] >XP_022927741.1 probable kinetochore protein NUF2 [Cucurbita moschata] >KAG7022576.1 NUF2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 401.0 bits (1029), Expect = 8.0e-108 Identity = 203/229 (88.65%), Postives = 216/229 (94.32%), Query Frame = 0
BLAST of Spg006211 vs. NCBI nr
Match: XP_023529466.1 (probable kinetochore protein NUF2 [Cucurbita pepo subsp. pepo] >XP_023529467.1 probable kinetochore protein NUF2 [Cucurbita pepo subsp. pepo] >XP_023529468.1 probable kinetochore protein NUF2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 401.0 bits (1029), Expect = 8.0e-108 Identity = 203/229 (88.65%), Postives = 216/229 (94.32%), Query Frame = 0
BLAST of Spg006211 vs. NCBI nr
Match: XP_022989268.1 (probable kinetochore protein NUF2 [Cucurbita maxima] >XP_022989269.1 probable kinetochore protein NUF2 [Cucurbita maxima]) HSP 1 Score: 399.4 bits (1025), Expect = 2.3e-107 Identity = 202/229 (88.21%), Postives = 215/229 (93.89%), Query Frame = 0
BLAST of Spg006211 vs. NCBI nr
Match: XP_038877491.1 (kinetochore protein NUF2 homolog [Benincasa hispida] >XP_038877492.1 kinetochore protein NUF2 homolog [Benincasa hispida]) HSP 1 Score: 396.7 bits (1018), Expect = 1.5e-106 Identity = 205/229 (89.52%), Postives = 212/229 (92.58%), Query Frame = 0
BLAST of Spg006211 vs. ExPASy Swiss-Prot
Match: Q8RXJ0 (Kinetochore protein NUF2 homolog OS=Arabidopsis thaliana OX=3702 GN=NUF2 PE=1 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 4.5e-61 Identity = 113/218 (51.83%), Postives = 166/218 (76.15%), Query Frame = 0
BLAST of Spg006211 vs. ExPASy Swiss-Prot
Match: P33895 (Kinetochore protein NUF2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=NUF2 PE=1 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.4e-06 Identity = 47/204 (23.04%), Postives = 96/204 (47.06%), Query Frame = 0
BLAST of Spg006211 vs. ExPASy Swiss-Prot
Match: Q10173 (Kinetochore protein nuf2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=nuf2 PE=1 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 4.1e-06 Identity = 47/186 (25.27%), Postives = 93/186 (50.00%), Query Frame = 0
BLAST of Spg006211 vs. ExPASy TrEMBL
Match: A0A6J1EIG6 (probable kinetochore protein NUF2 OS=Cucurbita moschata OX=3662 GN=LOC111434552 PE=3 SV=1) HSP 1 Score: 401.0 bits (1029), Expect = 3.9e-108 Identity = 203/229 (88.65%), Postives = 216/229 (94.32%), Query Frame = 0
BLAST of Spg006211 vs. ExPASy TrEMBL
Match: A0A6J1JNW1 (probable kinetochore protein NUF2 OS=Cucurbita maxima OX=3661 GN=LOC111486390 PE=3 SV=1) HSP 1 Score: 399.4 bits (1025), Expect = 1.1e-107 Identity = 202/229 (88.21%), Postives = 215/229 (93.89%), Query Frame = 0
BLAST of Spg006211 vs. ExPASy TrEMBL
Match: A0A1S4E5E4 (probable kinetochore protein NUF2 OS=Cucumis melo OX=3656 GN=LOC103503319 PE=3 SV=1) HSP 1 Score: 377.1 bits (967), Expect = 6.0e-101 Identity = 194/229 (84.72%), Postives = 206/229 (89.96%), Query Frame = 0
BLAST of Spg006211 vs. ExPASy TrEMBL
Match: A0A6J1DWL1 (probable kinetochore protein NUF2 OS=Momordica charantia OX=3673 GN=LOC111024175 PE=3 SV=1) HSP 1 Score: 374.8 bits (961), Expect = 3.0e-100 Identity = 193/229 (84.28%), Postives = 208/229 (90.83%), Query Frame = 0
BLAST of Spg006211 vs. ExPASy TrEMBL
Match: A0A0A0KNL7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G488740 PE=3 SV=1) HSP 1 Score: 374.0 bits (959), Expect = 5.1e-100 Identity = 193/229 (84.28%), Postives = 204/229 (89.08%), Query Frame = 0
BLAST of Spg006211 vs. TAIR 10
Match: AT1G61000.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: mitosis; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Kinetochore protein Nuf2 (InterPro:IPR005549); Has 50972 Blast hits to 29793 proteins in 2070 species: Archae - 902; Bacteria - 7404; Metazoa - 23628; Fungi - 4156; Plants - 2312; Viruses - 158; Other Eukaryotes - 12412 (source: NCBI BLink). ) HSP 1 Score: 236.1 bits (601), Expect = 3.2e-62 Identity = 113/218 (51.83%), Postives = 166/218 (76.15%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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