Spg006179 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg006179
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2
Locationscaffold4: 6056642 .. 6058257 (-)
RNA-Seq ExpressionSpg006179
SyntenySpg006179
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAATTTCATAAATTAAATAATTTAATTAAAAAAAAAAACAAAGAAAGAAGAAGAAGATGTAGGAAGTTTCAAAAAAGAAAAGGAAAAGGCCCCTTTTTCGAGCAGCGGCGGCAGGGTTTAGCATTTGAATGCCCTAAGTCTAAGACGGAGCTCCGTTCATCGTGGCTGATTGCATAGAATTTCTCGCCGCATTCTCAGATTTACCGATGGCTTCCTTTGCCGCCAGGGCCATTTTCCGATCCTCCTCCGGCTCAGGTTGCAAGGCTGCCACTCTTCTGAGCGCCGGAGCCAGAGCAGCTCCGGCTCGTTCACCATTTCGCATTGCTTCTAAACGACCTTTCTCTCATTGTTCTGCAAGGTAATTTCCTCAAAAGCTTTCGATTTCGACGAAGTGTGCTCAATGTAAATTAACTATGAAATCTGTCTGAGTTGAGTTAACTGCGACGACTAAGGATCGAGAATAGGGCACTTGTGCCGATGTGGATCGGAAACGAATGCTGAATTGAGTTGAAAATAAGCTGAATGTTCTCGTTTGTGATCATTTATTTATTTAATTCTGTGAAGGGTTCCAGTTGAAATGAGCTTCTGTGTGGAGTCGATGCTTCCGTTCCATTCTGCTACTTCTTCTGCATTGATGACTTCGATGCTTTCTGTTTCTCGACATAGTTATGGCTGGCTTTCAGAAGGTACTTTCAGTCTCTTGTTCTTCTAGTAGTTTCTAGGAATCGGACCAAGTTATGAGCAATTATACTAGGATGAATTTTACTCTTTTCAATGTCTTGTTATGCTGTCAGTTTTTTCTTTGGTTCTGGTTTTTGTTGGCAAAAAATTAAATCTGCTGTGTTGGTTGAATAGCTTTATTAGTTACTTGGATTGGCTTTGTGATGTACAACACAGAGGAGGATAACATGTGATATACACAATAGATCCTTTAAATTTGGACCTTAGAATGTAGGATGAGAAATAGGATGGGAAAATAGTGGAGGGAGGGATATTTTATTTATTTATTTATTATTTTTATATATACAAGAAACACGAACTTCTCACTGATATTTGAGAAGTTATAGATGAAGATGAAGAGATGAGCTTTTATAATTCATTTCATCATAATTTTCACCAAGTGATTGAAAACAATAATAGGAAACTATCTAGAAAATAATTCTCCACTTGCTCATGTTAAACCATCAACAGTATTTTGGTATTTTGGGCAAATATATTTCCCCACTGCATCAGTAATCTAAAGTCTAAACGCTCTTTTGGCTTGATTGAGCAGATGTTTTTTGCTATCTTTTTCATATCAGTGAATCAAGAATCTGAGTTTATTGTCTTAAGATAAATATAAAATGCTGCATTCTGGATTGGGGTCTAACTTTTTCACCGCTAAAAAACACAAAATGGCTTTCATCCACATACTTGAAATTAAATGTGAAGATACTAATTGCTATGTTTAATCAGTGTTCAATGATGATGTGTGATGAATGGTCAAGGGGATTCGAGAGAAGATTTTTATGCAGAGTTCCACATTGTGACAGTGCCCGCTGCTAAATTAGATGAGCTGATGCACAGGGATTTGGTTTTCCATGTCTTGACTTTCAGTCAAGTTTGCATGTCTTGA

mRNA sequence

ATGGCTTCCTTTGCCGCCAGGGCCATTTTCCGATCCTCCTCCGGCTCAGGTTGCAAGGCTGCCACTCTTCTGAGCGCCGGAGCCAGAGCAGCTCCGGCTCGTTCACCATTTCGCATTGCTTCTAAACGACCTTTCTCTCATTGTTCTGCAAGGGTTCCAGTTGAAATGAGCTTCTGTGTGGAGTCGATGCTTCCGTTCCATTCTGCTACTTCTTCTGCATTGATGACTTCGATGCTTTCTGTTTCTCGACATAGTTATGGCTGGCTTTCAGAAGGGGATTCGAGAGAAGATTTTTATGCAGAGTTCCACATTGTGACAGTGCCCGCTGCTAAATTAGATGAGCTGATGCACAGGGATTTGGTTTTCCATGTCTTGACTTTCAGTCAAGTTTGCATGTCTTGA

Coding sequence (CDS)

ATGGCTTCCTTTGCCGCCAGGGCCATTTTCCGATCCTCCTCCGGCTCAGGTTGCAAGGCTGCCACTCTTCTGAGCGCCGGAGCCAGAGCAGCTCCGGCTCGTTCACCATTTCGCATTGCTTCTAAACGACCTTTCTCTCATTGTTCTGCAAGGGTTCCAGTTGAAATGAGCTTCTGTGTGGAGTCGATGCTTCCGTTCCATTCTGCTACTTCTTCTGCATTGATGACTTCGATGCTTTCTGTTTCTCGACATAGTTATGGCTGGCTTTCAGAAGGGGATTCGAGAGAAGATTTTTATGCAGAGTTCCACATTGTGACAGTGCCCGCTGCTAAATTAGATGAGCTGATGCACAGGGATTTGGTTTTCCATGTCTTGACTTTCAGTCAAGTTTGCATGTCTTGA

Protein sequence

MASFAARAIFRSSSGSGCKAATLLSAGARAAPARSPFRIASKRPFSHCSARVPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEGDSREDFYAEFHIVTVPAAKLDELMHRDLVFHVLTFSQVCMS
Homology
[Close]
BLAST of Spg006179 vs. NCBI nr
Match: TYK15251.1 (protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa])

HSP 1 Score: 151.8 bits (382), Expect = 4.3e-33
Identity = 84/92 (91.30%), Postives = 86/92 (93.48%), Query Frame = 0 

Query: 1  MASFAARAIFRSSSGSGCKAATLLSAGARAAPARSPFRIASKRPFSHCSARVPVEMSFCV 60
          MASFAARAIFRSSSG   KAATLLSAGARAAPARSPFRIASKRPFSH S R+P+EMSFCV
Sbjct: 1  MASFAARAIFRSSSG---KAATLLSAGARAAPARSPFRIASKRPFSHSSFRIPIEMSFCV 60

Query: 61 ESMLPFHSATSSALMTSMLSVSRHSYGWLSEG 93
          ESMLPFHSATSSALMTSMLSVS HSYGWLSEG
Sbjct: 61 ESMLPFHSATSSALMTSMLSVSPHSYGWLSEG 89

[Close]
BLAST of Spg006179 vs. NCBI nr
Match: XP_038887457.1 (protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial-like isoform X3 [Benincasa hispida])

HSP 1 Score: 149.8 bits (377), Expect = 1.6e-32
Identity = 82/92 (89.13%), Postives = 84/92 (91.30%), Query Frame = 0 

Query: 1  MASFAARAIFRSSSGSGCKAATLLSAGARAAPARSPFRIASKRPFSHCSARVPVEMSFCV 60
          MASFA RAIFRSSSG   KAATLLS GARAAPARSPFRIASKRPFS CS R+PVEMSFCV
Sbjct: 1  MASFAGRAIFRSSSG---KAATLLSVGARAAPARSPFRIASKRPFSQCSVRIPVEMSFCV 60

Query: 61 ESMLPFHSATSSALMTSMLSVSRHSYGWLSEG 93
          ESMLPFHSATSSALM SMLSVSRH+YGWLSEG
Sbjct: 61 ESMLPFHSATSSALMISMLSVSRHNYGWLSEG 89

[Close]
BLAST of Spg006179 vs. NCBI nr
Match: KAA0039497.1 (protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa])

HSP 1 Score: 149.4 bits (376), Expect = 2.1e-32
Identity = 83/91 (91.21%), Postives = 85/91 (93.41%), Query Frame = 0 

Query: 1  MASFAARAIFRSSSGSGCKAATLLSAGARAAPARSPFRIASKRPFSHCSARVPVEMSFCV 60
          MASFAARAIFRSSSG   KAATLLSAGARAAPARSPFRIASKRPFSH S R+P+EMSFCV
Sbjct: 1  MASFAARAIFRSSSG---KAATLLSAGARAAPARSPFRIASKRPFSHSSFRIPIEMSFCV 60

Query: 61 ESMLPFHSATSSALMTSMLSVSRHSYGWLSE 92
          ESMLPFHSATSSALMTSMLSVS HSYGWLSE
Sbjct: 61 ESMLPFHSATSSALMTSMLSVSPHSYGWLSE 88

[Close]
BLAST of Spg006179 vs. NCBI nr
Match: XP_008459321.1 (PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucumis melo])

HSP 1 Score: 147.9 bits (372), Expect = 6.2e-32
Identity = 82/91 (90.11%), Postives = 84/91 (92.31%), Query Frame = 0 

Query: 1  MASFAARAIFRSSSGSGCKAATLLSAGARAAPARSPFRIASKRPFSHCSARVPVEMSFCV 60
          MASFAARAIFRSSSG   K ATLLSAGARAAPARSPFRIASKRPFSH S R+P+EMSFCV
Sbjct: 1  MASFAARAIFRSSSG---KTATLLSAGARAAPARSPFRIASKRPFSHSSFRIPIEMSFCV 60

Query: 61 ESMLPFHSATSSALMTSMLSVSRHSYGWLSE 92
          ESMLPFHSATSSALMTSMLSVS HSYGWLSE
Sbjct: 61 ESMLPFHSATSSALMTSMLSVSPHSYGWLSE 88

[Close]
BLAST of Spg006179 vs. NCBI nr
Match: XP_008459322.1 (PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Cucumis melo])

HSP 1 Score: 147.9 bits (372), Expect = 6.2e-32
Identity = 82/91 (90.11%), Postives = 84/91 (92.31%), Query Frame = 0 

Query: 1  MASFAARAIFRSSSGSGCKAATLLSAGARAAPARSPFRIASKRPFSHCSARVPVEMSFCV 60
          MASFAARAIFRSSSG   K ATLLSAGARAAPARSPFRIASKRPFSH S R+P+EMSFCV
Sbjct: 1  MASFAARAIFRSSSG---KTATLLSAGARAAPARSPFRIASKRPFSHSSFRIPIEMSFCV 60

Query: 61 ESMLPFHSATSSALMTSMLSVSRHSYGWLSE 92
          ESMLPFHSATSSALMTSMLSVS HSYGWLSE
Sbjct: 61 ESMLPFHSATSSALMTSMLSVSPHSYGWLSE 88

[Close]
BLAST of Spg006179 vs. ExPASy Swiss-Prot
Match: Q93ZJ3 (Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NFD6 PE=3 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.1e-10
Identity = 42/87 (48.28%), Postives = 60/87 (68.97%), Query Frame = 0 

Query: 6  ARAIFRSSSGSGCKAAT-LLSAGARAAPARSPFRIASKRPFSHCSARVPVEMSFCVESML 65
          AR++ R++S     A+T   ++ A++AP    FR  ++R       R PVE+SFCVES+L
Sbjct: 10 ARSMLRAASSRSAAASTGRFASQAKSAPPL--FRATARRSPLLSPLRNPVELSFCVESLL 69

Query: 66 PFHSATSSALMTSMLSVSRHSYGWLSE 92
          P+HSAT+SALMTS LS+S  +YGWLS+
Sbjct: 70 PYHSATASALMTSKLSISGQTYGWLSD 94

[Close]
BLAST of Spg006179 vs. ExPASy TrEMBL
Match: A0A5D3CTR8 (Protein NUCLEAR FUSION DEFECTIVE 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold892G00250 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 2.1e-33
Identity = 84/92 (91.30%), Postives = 86/92 (93.48%), Query Frame = 0 

Query: 1  MASFAARAIFRSSSGSGCKAATLLSAGARAAPARSPFRIASKRPFSHCSARVPVEMSFCV 60
          MASFAARAIFRSSSG   KAATLLSAGARAAPARSPFRIASKRPFSH S R+P+EMSFCV
Sbjct: 1  MASFAARAIFRSSSG---KAATLLSAGARAAPARSPFRIASKRPFSHSSFRIPIEMSFCV 60

Query: 61 ESMLPFHSATSSALMTSMLSVSRHSYGWLSEG 93
          ESMLPFHSATSSALMTSMLSVS HSYGWLSEG
Sbjct: 61 ESMLPFHSATSSALMTSMLSVSPHSYGWLSEG 89

[Close]
BLAST of Spg006179 vs. ExPASy TrEMBL
Match: A0A5A7TDD1 (Protein NUCLEAR FUSION DEFECTIVE 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G003170 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 1.0e-32
Identity = 83/91 (91.21%), Postives = 85/91 (93.41%), Query Frame = 0 

Query: 1  MASFAARAIFRSSSGSGCKAATLLSAGARAAPARSPFRIASKRPFSHCSARVPVEMSFCV 60
          MASFAARAIFRSSSG   KAATLLSAGARAAPARSPFRIASKRPFSH S R+P+EMSFCV
Sbjct: 1  MASFAARAIFRSSSG---KAATLLSAGARAAPARSPFRIASKRPFSHSSFRIPIEMSFCV 60

Query: 61 ESMLPFHSATSSALMTSMLSVSRHSYGWLSE 92
          ESMLPFHSATSSALMTSMLSVS HSYGWLSE
Sbjct: 61 ESMLPFHSATSSALMTSMLSVSPHSYGWLSE 88

[Close]
BLAST of Spg006179 vs. ExPASy TrEMBL
Match: A0A1S3CB40 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498488 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 3.0e-32
Identity = 82/91 (90.11%), Postives = 84/91 (92.31%), Query Frame = 0 

Query: 1  MASFAARAIFRSSSGSGCKAATLLSAGARAAPARSPFRIASKRPFSHCSARVPVEMSFCV 60
          MASFAARAIFRSSSG   K ATLLSAGARAAPARSPFRIASKRPFSH S R+P+EMSFCV
Sbjct: 1  MASFAARAIFRSSSG---KTATLLSAGARAAPARSPFRIASKRPFSHSSFRIPIEMSFCV 60

Query: 61 ESMLPFHSATSSALMTSMLSVSRHSYGWLSE 92
          ESMLPFHSATSSALMTSMLSVS HSYGWLSE
Sbjct: 61 ESMLPFHSATSSALMTSMLSVSPHSYGWLSE 88

[Close]
BLAST of Spg006179 vs. ExPASy TrEMBL
Match: A0A1S3C9E2 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498488 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 3.0e-32
Identity = 82/91 (90.11%), Postives = 84/91 (92.31%), Query Frame = 0 

Query: 1  MASFAARAIFRSSSGSGCKAATLLSAGARAAPARSPFRIASKRPFSHCSARVPVEMSFCV 60
          MASFAARAIFRSSSG   K ATLLSAGARAAPARSPFRIASKRPFSH S R+P+EMSFCV
Sbjct: 1  MASFAARAIFRSSSG---KTATLLSAGARAAPARSPFRIASKRPFSHSSFRIPIEMSFCV 60

Query: 61 ESMLPFHSATSSALMTSMLSVSRHSYGWLSE 92
          ESMLPFHSATSSALMTSMLSVS HSYGWLSE
Sbjct: 61 ESMLPFHSATSSALMTSMLSVSPHSYGWLSE 88

[Close]
BLAST of Spg006179 vs. ExPASy TrEMBL
Match: A0A0A0KVK4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G636540 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 4.3e-31
Identity = 79/91 (86.81%), Postives = 84/91 (92.31%), Query Frame = 0 

Query: 1  MASFAARAIFRSSSGSGCKAATLLSAGARAAPARSPFRIASKRPFSHCSARVPVEMSFCV 60
          MASFAAR+IFRSSS    KAATLLSAGARAAPA SPFRIASKRPFSHCS R+P+E+SFCV
Sbjct: 1  MASFAARSIFRSSS---AKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIELSFCV 60

Query: 61 ESMLPFHSATSSALMTSMLSVSRHSYGWLSE 92
          ESMLPFHSATSSALMTSMLSVS HS+GWLSE
Sbjct: 61 ESMLPFHSATSSALMTSMLSVSPHSFGWLSE 88

[Close]
BLAST of Spg006179 vs. TAIR 10
Match: AT1G28395.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 89 Blast hits to 89 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 72.0 bits (175), Expect = 4.0e-13
Identity = 43/90 (47.78%), Postives = 61/90 (67.78%), Query Frame = 0 

Query: 5  AARAIFRSSSGSGCKAATLLSAGARAAP--ARSPFRIASKRPFSHCSARVPVEMSFCVES 64
          AAR++FRS++      A   SAG +  P  AR+ FR+  + P ++   R PVE+S CVE+
Sbjct: 3  AARSVFRSAASRASSTAFRFSAGPKPMPSSARTAFRMPKQSPLTNRIFRSPVELSCCVET 62

Query: 65 MLPFHSATSSALMTSMLSVSRHSYGWLSEG 93
          MLP+H+AT+SAL+ SMLSVSR   GW+ +G
Sbjct: 63 MLPYHTATASALLNSMLSVSRR--GWIVDG 90

[Close]
BLAST of Spg006179 vs. TAIR 10
Match: AT1G28395.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 89 Blast hits to 89 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 72.0 bits (175), Expect = 4.0e-13
Identity = 43/90 (47.78%), Postives = 61/90 (67.78%), Query Frame = 0 

Query: 5  AARAIFRSSSGSGCKAATLLSAGARAAP--ARSPFRIASKRPFSHCSARVPVEMSFCVES 64
          AAR++FRS++      A   SAG +  P  AR+ FR+  + P ++   R PVE+S CVE+
Sbjct: 3  AARSVFRSAASRASSTAFRFSAGPKPMPSSARTAFRMPKQSPLTNRIFRSPVELSCCVET 62

Query: 65 MLPFHSATSSALMTSMLSVSRHSYGWLSEG 93
          MLP+H+AT+SAL+ SMLSVSR   GW+ +G
Sbjct: 63 MLPYHTATASALLNSMLSVSRR--GWIVDG 90

[Close]
BLAST of Spg006179 vs. TAIR 10
Match: AT1G28395.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 72.0 bits (175), Expect = 4.0e-13
Identity = 43/90 (47.78%), Postives = 61/90 (67.78%), Query Frame = 0 

Query: 5  AARAIFRSSSGSGCKAATLLSAGARAAP--ARSPFRIASKRPFSHCSARVPVEMSFCVES 64
          AAR++FRS++      A   SAG +  P  AR+ FR+  + P ++   R PVE+S CVE+
Sbjct: 3  AARSVFRSAASRASSTAFRFSAGPKPMPSSARTAFRMPKQSPLTNRIFRSPVELSCCVET 62

Query: 65 MLPFHSATSSALMTSMLSVSRHSYGWLSEG 93
          MLP+H+AT+SAL+ SMLSVSR   GW+ +G
Sbjct: 63 MLPYHTATASALLNSMLSVSRR--GWIVDG 90

[Close]
BLAST of Spg006179 vs. TAIR 10
Match: AT2G20585.2 (nuclear fusion defective 6 )

HSP 1 Score: 70.5 bits (171), Expect = 1.2e-12
Identity = 45/94 (47.87%), Postives = 64/94 (68.09%), Query Frame = 0 

Query: 6   ARAIFRSSSGSGCKAAT-LLSAGARAAPARSPFRIASKRPFSHCSARVPVEMSFCVESML 65
           AR++ R++S     A+T   ++ A++AP    FR  ++R       R PVE+SFCVES+L
Sbjct: 10  ARSMLRAASSRSAAASTGRFASQAKSAPPL--FRATARRSPLLSPLRNPVELSFCVESLL 69

Query: 66  PFHSATSSALMTSMLSVSRHSYGWLSEGDSREDF 99
           P+HSAT+SALMTS LS+S  +YGWLS+   +EDF
Sbjct: 70  PYHSATASALMTSKLSISGQTYGWLSDA-CKEDF 100

[Close]
BLAST of Spg006179 vs. TAIR 10
Match: AT2G20585.3 (nuclear fusion defective 6 )

HSP 1 Score: 70.5 bits (171), Expect = 1.2e-12
Identity = 43/88 (48.86%), Postives = 61/88 (69.32%), Query Frame = 0 

Query: 6  ARAIFRSSSGSGCKAAT-LLSAGARAAPARSPFRIASKRPFSHCSARVPVEMSFCVESML 65
          AR++ R++S     A+T   ++ A++AP    FR  ++R       R PVE+SFCVES+L
Sbjct: 10 ARSMLRAASSRSAAASTGRFASQAKSAPPL--FRATARRSPLLSPLRNPVELSFCVESLL 69

Query: 66 PFHSATSSALMTSMLSVSRHSYGWLSEG 93
          P+HSAT+SALMTS LS+S  +YGWLS+G
Sbjct: 70 PYHSATASALMTSKLSISGQTYGWLSDG 95

The following BLAST results are available for this feature:
BLAST of Spg006179 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK15251.14.3e-3391.30protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa][more]
XP_038887457.11.6e-3289.13protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial-like isoform X3 [Benincasa his... [more]
KAA0039497.12.1e-3291.21protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa][more]
XP_008459321.16.2e-3290.11PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like ... [more]
XP_008459322.16.2e-3290.11PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like ... [more]
BLAST of Spg006179 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q93ZJ31.1e-1048.28Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial OS=Arabidopsis thaliana OX=370... [more]
BLAST of Spg006179 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CTR82.1e-3391.30Protein NUCLEAR FUSION DEFECTIVE 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A5A7TDD11.0e-3291.21Protein NUCLEAR FUSION DEFECTIVE 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C... [more]
A0A1S3CB403.0e-3290.11protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 ... [more]
A0A1S3C9E23.0e-3290.11protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 ... [more]
A0A0A0KVK44.3e-3186.81Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G636540 PE=4 SV=1[more]
BLAST of Spg006179 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G28395.24.0e-1347.78unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G28395.14.0e-1347.78unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G28395.34.0e-1347.78unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G20585.21.2e-1247.87nuclear fusion defective 6 [more]
AT2G20585.31.2e-1248.86nuclear fusion defective 6 [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043459NFD6/NOXY2-likePANTHERPTHR33156OS02G0230000 PROTEINcoord: 3..92
IPR033251Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrialPANTHERPTHR33156:SF48PROTEIN NUCLEAR FUSION DEFECTIVE 6, CHLOROPLASTIC/MITOCHONDRIALcoord: 3..92

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg006179.1Spg006179.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000741 karyogamy
cellular_component GO:0016021 integral component of membrane