Spg006174 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg006174
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	zf-RVT domain-containing protein
Location	scaffold4: 5234604 .. 5244716 (-)
RNA-Seq Expression	Spg006174
Synteny	Spg006174

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTCTGGGTGCTGGAGCTCTGTCCAGTGGGGAGGGTTGGTTCTTTCTTTCTTCCTTTCAGGAGGTTAATGGAGATAGAGGTTATCATATTCAAGTTTTGAGAGCGTGTTCTTAGTTAGCATGGCCTCTGATCGACATGGGTCAATGAGGATAGAAAGTAAGGTCTTTTCCTGTGGTTTTGATCGGAATTTTAAAGGGAGGGTGGTCAGAATTACCGAAGTTCATAGGAGAAGAAAGTTCTACATATCTGCTGAAGAAGTTGTGGTTGTCTGGTTATTTGACCCAATAGATGACCTCCTCCTATCGCCTTCAACCCAAAAATTCTTTCGCAAGACATATTGCAAAAACGTATTCATCTGGATACATAAAATCACCAACAAGAGGGGGAGCTTCTTAGAGATCACCAAAGTAGCTAACTCAGGGGAAAGAACAACATTGTCGTCCCAGCTGGGATTGAGTTCAGGGGTTGGAAAGACTTTGCGAACTTGCTGAAAGATTTTGTCAATGGAAAGGTTTTAGATGAAAAGAAGGAAAAAGAGAAACAACCTAATCATCAAAGAACCCGAAAGAAATCCTATGCCGAGGCTATTATATCTGAGGTTAACAACGGGTACCCGGCACCCCCCTGTTATAAATGCCAGTGACCAAAGGGATGTTGAATACCAAAGTGAGAAACCGTGTAGATTGGACGTAAGAAAGATTGATTGGGAGGAAGTTATTGTTGTAACTAAACGTGATTTTCATGATGATTGGGGAAGGATTCTCGAAATTATGCAACATCAGCTTGAGACCACCCTCGTTATAAACCCTTTTCAGCCTGATAAAGCTCTGTTAAAATGTCCTTCAAAGGATTTGGCAAATTTAATAACCACAAACAAGGGGTGGGTTAGTTTCGGGCCTGTGATTTTGAAAGTTGAGAGATGGAACAAAAACATTCTATGGCAAAATTAATGTGGTGCCCGATTATGGAGGGTGGGTGAGAATTAGAAACCTACCGTTGCATTTATGGCACTTGCAAATATTTAAAGCTCTGGGGGACTGTTTGGGTGGTTTTATCGAATATGCTGAACCCAATTCTTTGCTCATTGACTGTGTGGAAGTTGGAATTAGAGTGAAAGGAAACTACTGCGGCTTCATCCCTGGAGAAATCGAGATTGTAGAGGATGATCAGGTCTTCAAAACTCAGATTGTCACCTTTGAGGAAGGGAATATGCTGATTAATCGGATCGTCGGACTTCATGGAAGCTTTTCGCCGGAAGCTGCGCACGCCTTCTACAGAGGCCCCATGGACCCATACTTGAACCCAGTGGATAAATGGAGGATTGAGAATGGTGCCTTTTGCCCACAGGTTAAAACCCAACAGTTACTCGAGGTAGACGGAGGGGCTGACATAGCATTTAATGGAAAGTAGACGGTTGCCTGTAGAAATTTTGAATTATCCCGCCAGAAAGGAAAGATGAAGATGAATGAAGCCCATGAACCCACGAATGATTTAGAGATCAGTAGGGGATATCATAATAGAAAGATGGATCAGGCCCAAAGGGATCGCCCCAAAAGGAAAAGCCCAGAGAAAAGCCTGAGGGCTCTGACCAAAACAAAAAAAGGGGTCTCTTTCGCCAAAGAAGCCCATGTTACTTTATTTAAAAAAGGAAAGACTCAATTTACGGATAAGGAAAGTGACCCACGAAGACACCATGAATACCTGGAAAAAGGTGACGGAGTAGCTGAATCGGAATTTCAATATCGAGCCCTGGAAGCAAAACAGAGGACGAATACTCAGCTGAGAGAGAACGAACAGAGCTTCACGTAGATATTCCAGGGGAATATTTCAACTGCTTTATGCAGGATGGAGAATGCTCATCTCAGGCCAATATAGTATTCAGGGGTGAAAAGGAAGGAGCCCATTGCTATAGTGAGCCGGAGGATAATGAAGGAAACGAGATAGTTCCTCTTTCGTTAGTTGATATGGAGGATGGGCACTATGAGAATAAGCAACAAGATCAAGCTCACCCAAAGGTTCTAGTGATATCGCCTACAGGTAAGGAAAACAGAGCACCCCCCAATATCGAAGGCTTTGTTATCACTAGAGAATTGATCCTCACTTTGAAGAGAAATAATCTGTGCATTCGGCCGATTGCTGGAACCAATGCTAAGAAAGGGTGCACGACAAACAAGCGTAGAAATAGAGAAGTCACGAACCTCCTTCGTAGTTTGGAAAAGGAGGATGATGTAGAGCCCATAAACACCAGGGAAGGCCAAAGTCAACAAGAAGGCGAGGCCATAGATAGGGACGATGAAGTTTCCCCATGAAGCTGATTGCCTGGAACGTTAGAGGCTTGGCTAGTCGTTCTCAAAGGGCGATTGTCAAGGATTTAATTAGTAGAGAGAGTCCTGATATATTTATTCTCCAAGAATCGGAACTCCACCAGATTGATCGTAGGGTTGTTAAAGCTGTTTGGAGCTCAAGACATGTTGGCTGGGTGAGTTTAGATGCTTGGGGCTCGGCAGGGGGTATTTTAGTTATGTGGAAAGAAAATCGTATCACTGTTGAAGATTCTATTGTTAGGGCTTACTCCATCTCCTTACTCTGTTCTTTCCCGGGGCAAATAAAGGGTTGGATTACTGGGGTGTGGTCCTTGTGACTCGAGGGATAGAAAGTTCTTTCTTCAAGAGATTTCGGATGCCGCTGGTCTTTGTCAAGGCATTTGGTGCTTGGTGGGAGACTTTAATATGGTCAGATGGATAGAGGATAAGCTCCATGGGCCTAGGATTACCAAAAGCATGAGGGCCTTCAATCGGTTTATAGAGCCTTTTGATCTTATTGATGTTGCGATGTCTAATGGCAGGTTTACTTGGTCCCGAGCAGGTGAAAGGGCAGCGGCTTCGAGGCTGGATAGGATCCTAATATCCAGGCAATGGGCTGAAGCCTTCAAAGAATTCAGGCTTGACCGTCTCCAGAGGCCTACTTCCGACCATTTTCCTTTAGCTTTTGCTGTGGGGGCTATGCAGTGGGGCCCAATGTCGTTCAGATTTGAAAATATGTGGATGAGCCATCCGGGCTTCAAGAAGCAGGTAGAGTTGTGGTGGGCTAAGCTCAATCCGAGGGGTTGGGCTGGATATAGATTTATGGCCAAGCTGAAGGGTTTGAAAGATCACATAAAACAGTGGAACAAAGAAGTTTTCGAAAACTTGAATGAGAAGAAGAAATCCATCCTTGATCAGATTGAAAAATATGACTTGCTCGAAGAACAAGGCCTCATTACCTCCCAGCAAGCGGATGATAGAATGATCCTCAAGTCCTCCCTCCTCGAAATTGCTATGAACGACCAAAGAAGGATGCACCAGAAATGTAAGTTAAAATGGATGACCGAGGGGGATGAAAATACGGCTTTCTTCCATAGATGGGCTGGGGCGATGAAGAGCAGAGCATATATTTCTATGTTGGAAGGAGAGGGGGGGGGGGAATTTCTTATCCTCTATGGATGAGATCGAGGCAGAGATAACCGGCTTCTTTAGTAAGTTGTATTCTAGTGATAATGGCCCCCATTTTGTCATTGATGGTGTGAATTGGGCTCCTTTAGATGGGCAAAGCAGTGATAGATTGGAAGAGCCTTTTAAAGAAGATGAGATCCTTAGAGCCATCAAAAGTTTGGGAGCGATGAAGTCCCCCGGTCCAGATGGTATGACGGGTGAATTTTTTAAAAACTTTTGGAACATCTTGAAGCCTGACTTAGTAGAGGTGTTCCATGAGTTTTTTAAAAATGGCATCATCAACAAAAGAGTGAATGAGACTTATATTTGCCTGATCCCGAAAACTAAGACAACCTCTAAGATTACTAAATTTCGGCCCATTAGCCTAGTCACTTCCCTCTACAAAGTGGTGGCTAAGTTCTTGGCCGAGAGGTTGAAGGAGGTCCTCCCTAGCACCATAAGTGATAGCCAAGCAGCTTTTGTTCATGGCAGGCAAATTCTTAATCCTATTTTAGTGGCAGCTGAGACCGTTGAAGAGTACAGAGCCAATCAAAGAAAAGGAGTGTTGCTTAAACTTGACCTTGAAAAGGCCTACGAAAAGGTGAGTTGGGAGTTCCTAGACGCCATCCTTCAGTTTAAGGGCTTCGGGGTGTTGTGGAGAAAATGGATTCGGGGCTGCTTATCGAAACTGAACTTCTCTATTATGATAAATGGCAAACCAAGGGGAAAGATTTACGCTTCTAGAGGTTTGAGACAAGGGGATCCCCTCTCCCCCTTTTTATTCACCATCGTAGGCGATGCTATTAGTCGGTCCACTCAGTATTGTCTTGAAAAGAAGATTCTCAAGGGGCTCCTGGTGGGTCGTGATAACTTAGAGATTTCTATTTTACAATATGTTGATGATACTTTGATTTTCAGTGACCATGACGAAGCGGTTTTGATGAAATGGTGGGAGATTTTAAACCTTACTATGACAGGGGCGGGGCTGTCCTTGAACAAAGCTAAGTCTTCGATCACTGGGATTAATATTCAAAAGGAGGAGCTGGATCGTTGGGCTCATAGGTTCGGCTGTAAGATTGCGCCTTTACCCATCAACTACCTTGGCTTCTCCCTAGGAAGCAACCACCACAGAATTGGGTTTTGGGATCCTTTAGTTGATAAACTTAAAGCTAAGATTGATGGCTGGAAAAATTTGCAACTTTCCAAAGGGGGTCGGGTTACTCTTGCTCAATCAATCCTCTCTAGTTTGCCCATATATTGTTTTTCCCTCTTAAAAGCCCCTATAAAGGTGATTAATAGAATGGAAAATCTCATTAGAGACTTCATTTGGAATGGTGGCGCCTTTAAGCCTATTTGTAACCTTGTGAAATGGGATTGGGCAGCTTTGCCCACATCCCACGGTGGCATTGGAATGGGCGCGTTAGGGCATCGCAATAAGGCCCTCCTCACTAAATGGCTTTGGAGATTTGCCCATGAGGAAAATGCAACTTGGAGAAAAGTAATCAGCAGTATATATGGGATTGAAGATTTTGGTTGGAAAACTAAGAGGACTTACAAAAGGGGCAGCAGGAGAATGTGGCCAGACATTCAAAGAAATCAGCAAAGGTTTGAGGAATTTTCCAAGTTCCAAGTCAGTTGTGGTAACAAAATTAGATTTTGGGAAGATGCTTGGTGTGATCCTAGACCCCTGAACATGGTTTTCCCGGACCTCTTTGACGTTTCCTATAAAAAGAATGCTTCCATTAAGGAGTGTTGGGATGATAATAACCAAACGTGGAACCTTGGGCTGCGTAGGGGGCTCTTTGATCGGGAAGTCAGCAGCTGGGTTGGTTTAACTGAGATGCTGGAAAATATCCAGTTGGGAGATCAGGAAGACAGAATCTTGTGGAAGCTGGAGCCCTCGGGTTGCTTTTCTTGTAAATCTTTGGTTCGGAATTCGATTAGTAGATCGCCTAATATTAGTAAGTCTTTTGTTGGGCAAATTTGGAAGCATAATTCCCCCAAAAAGGTGAAAGTTTTCCTCTGGTCGGTGGCTTATAGGAGCTTGAATACGGATGAGAAAGTGCAAAGTAAGCTCAGAAATTGGTGTCTTTCCCCCTCGGTTTGCAGACTTTGCCTTAGGGAGTCAGAGAATATAGATCATTTGTTCTTACATTGTGTGTTTGCTCAGAGGGCCTGGAATTTTATTGGTGAGTTATTGGGGTTGTCCTTTTGTTTGCCGAAGAGTATAGAGGAGTGGTTAGCTGAGGGCCTGATTGCGTGGAACTTAAAGAATAAGGCTAAAGTGATTGGGGGATGCGCGTTTAGAGCAACCATGTGGCTTTTGTGGAAAGAGAGAAACACTAGAACTTTCGACGATAATTCGTCCTCTTTTGAGTTTTTTGCAAATACTGTAAAGAACACTGCCTCTTGGTGGATTTCCTCACACAAAAAGATTTTTTGTAATTACAGCTTGCTTATGATTACTAAAGATTGGCAAGCCCTTTTGAGATAGTTCTTGGGCGGGGCGATCTCCACCCCGGCCCTTAGATTGTTCATCCTTTTTGTGATTAATACATATCTTTTGATGTTTCTTATAAAAAAAAAAAAAAAGAGCTTGTTGACAGATGTCTACCTATCGTTGTCAACAACATTTAGTAATTAGAACTTAAAAGACAAGGAAAATCACATCAATTAATTTTATTGGAACATATAAACTATATAATATACCTCAAGATTGTTCCACATAAGAAGGTCAATATTACAAGAGTCCTAATATTCCAATTGTGCTTCAACACGTGTATGGGACAATCTTGAGCTTATCAAAGATGTCTACCTATTATTGTCAACAACTTCATCAATTAGAACATAAAAACCAAAAAGAGGAAATCTTTAGGGTGGTTTGTTGGACGAAGGAGGTGTGCCTAAGGGCAACGAAGGACTTATTCCGATAGTGTGCTTCTTGAATCACGAAGGAATTTTTTTTTCCAATGAGACTTGTCATTGACCAGAATTTCAACCGTCAGTTTATTGAGGAGAAAGAGACGTCAAATTCATCGAAAATGGTTGTCTTGCATCTGCCAAATGCATCGAATGTGGCGGGTCAGATGGTGCAATCGAGTAGGGGTCACATGAAGAAGGTGGGGTGTCCAACTACTCAAAGTGGTAGGCCAGAAAAAGTTGTGAATCAAGGGAAGCTTATGAAAAACCATCTATGCTCTGCTCCGGTAAGTTGACTTTTCCTTTACCTTTCTCTTTAGCTTTGCCTTCTAAAGGAGGAGGGGGTCTGAACAGTTTTAATGAAAGTGTTGGGTCTCCATTGTTGCTTAATTCTTTTCCAATTTATGGTTGTGTCTTGCCTCATTCGACTTACTATGTGCTAAGCGAGAGTGTTTCAACTTTTGTGCCTCTGTCCTATACTTTGGGGTGTCCAACTACTCGCAAGGGGAGGGGGTTCAGTCAACCTTTTCAAAACAAGTTGTTGTTGGTAACCCTATGCCCCTATTTAGTTCTTCGACCCTTCAAGGTTTCCCTACAACTAGGGGTACTCATGGCAATTGGCCCGCGACTTGAACTTCCTTCGCTTCGGTTGGAATTCATAAAATCTCGGATGAGGTGAATCCCTGAAGCACCAACATTAATACTAAGATGGGAAAAACGACTAGTAAGAGAGGAGGGAGTTCTAAAGAAGCTAGACAAGGAACTTAAAAAGTTGGATTGTTCTATGAAGTCTATGAAGTAATGTAATAAGGTTATTGAGGGGTGTAGTTTGTTTGACACCCCCAAACAACGAGTTTACTTGGGCTAACAGTAGGATGCATAGCAAAATAGATAGATTTCTATTATCGAGGAATTGATGGAGACTTTTTCCACAGTTAGACAATTGTTGGGACCTAGAGCCACCTCAAATCATTGGTTGCACATCCTTGTCTCAGGTCCTCAGTGTTGGGTTTTATGCCCTAAAACTCGTAGATAGTGAATGTAACCGTTGACTGGATATTAATGAAATAATATTGATATATTTTTCCATTAAATGTTATTAGGTATTTTATATTTGTCTTTGCCTAAAATAACCCTAATCCAATAAACTAGACATCCTAGGTTGTAATATGAGTCTTGAACTATATGTAGCGACATATGGGGATCATTGTTCAAGAAACAGCCTAAAGGGTCTATAGTATAGGGATAAGACTGGGTGCCTTATCCTGGTGACACTATGGATACGACCCACCTTGTATGATACAAACGCTATGATCCAACGCGTTCGTGTAGGAGACATGCGAGTGAGGGTATCCTATGCAATGAGTTTGCATAAGACCGGACCGCGAAATAGTAACCACTTGTTATAACACCGTTGACTAGTTGGTTTTCTATTTCACTAGGACGACCTAGACAACTTGGTCTTAATCCTGAGTTGATTATGGACTCCTGCTCATGAGGGATTGTCCTTTGATTTGTATGGGTGAGAGTGGCCAATACGCCGACTCAATAAGCCTACCATTTTGGGGACAAGACCGAGTGGGGAGCTGGGAACATAATCGTACAAGATGGAATTCACTCCTTTCCGACTTTAGGGAAGCAGATGAGTGTTCCCTTAAGTGGTCACTCCGAGTCTTGAACAAAGGGCCCTACCCTCTCAATGGCACGAGAGGGTTTTCTGTTTGATGGTTGGACCACAAACAGGTTGTTCATTAGAGGAGAACTGGTACTTAAGGAAATAGGAGTAACCCAAGGGTAAAACGGTAATTTGACCCAACTGGTGTTACGGACACTCGTGAAGGACTAACTAGTCGATATTGGTCTATATCCGTGGACACAGAAAATATGTCTGCAGTGAGAAGAGTGCAACTCTGAGTCTATAGTGGAATGTACACACAGTTAACGAATATTGATTAATTTGGTTAATGAGTTTGACCAATTAATCAAACATCGTTGGAGCTTCTGATCTGCAGGTTCATTAGGTCCCACTGGTAGCTCAAAAAGTAATTTGAGGCAACTAAGTAATAAATGTAAATTGAAAGTGTTCAATTTACTAAGGGAAACAATATAATATATATTGATATATTATTATGAGAGAAATTAATATTTGAAGAAATTCAAATATTAATATAAATTTGAGTCACTATAAATTTATGGAAGTTTGAAAGAGTTCAAATATGAATTAATTAATTTTAAGGCCTAAAATCTATTTGGGCAAAATTAATTAATTCAAAGACGGAAATTAAATATGTGATATTTAATTGGTGGTTAATTAATTAAAGAATTCATTAGCCGGGAATTAATCAATTATGGAAATAATTAATCACTTAAGGAAGTGATTAATCATTTATGGAAATGATCTAATCACTTATGGAATAATTAGTCATTTGTGGAAAAGATTAATCAATTATGGAATTGATTGATCTTGGATTGATTAAAAAAGAATAAAGATTGAATCAATTTTGGAAAAGATTGATTTAATTGAATATTTTATTCATGGCCTCTCTTCTATAAATAGAACACTAGACCTAATTGGTTCAGTACTCTTCTATTGCTCTTAGACTCACAAGACAAGGCCATAGAATTCTCTCTAGCCTCCCTCTTAGAGAAAGACTCCCACAAGTCATTTGCCTCCTAGACTTAGAGACATACCGGTGTAACCTCTGTGGTTATTGTGTCTTTGAAGAAGAAATTTCCAGCAAAGAAATCAAGAGGGAGTTGCTGGGTTTTCGGTCGTTGGAGCATCGTTGGCGAAGAACGGTCAAGTCTACAACGAAGGTTTGTAACGGTTCTTTCCCGTTTCTCTAGAAAAGCAAGAAAATAAATTTAGATTTATTTTTCAGCATGTTTATAGCTATTTTCCAGCAACTTTAAAGCATGTTTAAAGTTTATTTTGCCTTTTCGTAACGGTATTTTAATGTTAATTAATATACAGCGTAAGGTCCTTTCAATGCGCTTCCGCTGCGTGGGGACTTTTATTCCCTTCACTTAGAAGTAGGGCCTCTGTCCTTTTAGGTTCAAAAACATGTGGCTAGATCATTCCTCCTTTAAACCTTCCTTTCCCTCATGGTGGAATACGGAGGTCTCGAGCAATTGGATAGGCTATCGGTTCATGGGAAAGCTAAGAAAACTAAAATGGATTCTAAAATCATGGAATAGGGAGGTCTTTGGGGACTTTCGGATTAAAAAGGAGGAGGCAAGTAGGATTGGTTGTATTGTCGCTTTAGAAGAGATTAGTCAGCTGAAGGAGGCCCTTAAGGAGGAGCGGATGTCTCTTAAGTTGGAGTATGCGATGGTTAAAAAGGACACCGTAAGTTGGAAACAATAGGCCAAAGTAAAATGAGCAAAGAAGGGGGATTGTAATTCTTCTTTCTTCCAAAAGGCAAACGGAAGAAGAAACAAGAATTTTGTTGGGCCTTTGGAGAATGATAGGGGAATCCTACCTTAAAGAGGGGAAGGAGGTTGAGGATGAGATTCTTCGTATTTCTCTAAGCTCTACACTCCAGAGGTGTCTCCCAAACCCTTTTGTGGAGGGGTTGACTAGAGCCCCATTCCTGAGAAGGAGAAGTGTGGATTGGAGGCTCCCTTTTCAGAGGAAGAGGTTATGAACACGGTCTTCTATGGTGACAAAGACGCGGCCCCAGGGCTTGACGACATCTCCATGACCCTTTTTGATCACTTATAG

mRNA sequence

GTTCTGGGTGCTGGAGCTCTGTCCAGTGGGGAGGTTAGCATGGCCTCTGATCGACATGGGTCAATGAGGATAGAAAGTAAGGTCTTTTCCTGTGGTTTTGATCGGAATTTTAAAGGGAGGGTGGTCAGAATTACCGAAGTTCATAGGAGAAGAAAGTTCTACATATCTGCTGAAGAAGTTGTGGTTGTCTGGGGAAAGAACAACATTGTCGTCCCAGCTGGGATTGAGTTCAGGGGTTGGAAAGACTTTGCGAACTTGCTGAAAGATTTTGTCAATGGAAAGGTTTTAGATGAAAAGAAGGAAAAAGAGAAACAACCTAATCATCAAAGAACCCGAAAGAAATCCTATGCCGAGGCTATTATATCTGAGGTTAACAACGGAGATGGAACAAAAACATTCTATGGCAAAATTAATGTGGTGCCCGATTATGGAGGGTGGGTGAGAATTAGAAACCTACCGTTGCATTTATGGCACTTGCAAATATTTAAAGCTCTGGGGGACTGTTTGGGTGGTTTTATCGAATATGCTGAACCCAATTCTTTGCTCATTGACTGTGTGGAAGTTGGAATTAGAGTGAAAGGAAACTACTGCGGCTTCATCCCTGGAGAAATCGAGATTGTAGAGGATGATCAGGTCTTCAAAACTCAGATTGTCACCTTTGAGGAAGGGAATATGCTGATTAATCGGATCGTCGGACTTCATGGAAGCTTTTCGCCGGAAGCTGCGCACGCCTTCTACAGAGGCCCCATGGACCCATACTTGAACCCAGTGGATAAATGGAGGATTGAGAATGGTGCCTTTTGCCCACAGGTTAAAACCCAACAGTTACTCGAGGATGGAGAATGCTCATCTCAGGCCAATATAGTATTCAGGGGTGAAAAGGAAGGAGCCCATTGCTATAGTGAGCCGGAGGATAATGAAGGAAACGAGATAGTTCCTCTTTCGTTAGTTGATATGGAGGATGGGCACTATGAGAATAAGCAACAAGATCAAGCTCACCCAAAGGTTCTAGTGATATCGCCTACAGGTAAGGAAAACAGAGCACCCCCCAATATCGAAGGCTTTGTTATCACTAGAGAATTGATCCTCACTTTGAAGAGAAATAATCTGTGCATTCGGCCGATTGCTGGAACCAATGCTAAGAAAGGGTGCACGACAAACAAGCGTAGAAATAGAGAAGTCACGAACCTCCTTCGTAGTTTGGAAAAGGAGGATGATGTAGAGCCCATAAACACCAGGGAAGGCCAAAGTCAACAAGAAGGCGAGGCCATAGATAGGGACGATGAAAATCGGAACTCCACCAGATTGATCGTAGGGTTGTTAAAGCTGTTTGGAGCTCAAGACATGTTGGCTGGGGTTGGATTACTGGGGTGTGGTCCTTGTGACTCGAGGGATAGAAAGTTCTTTCTTCAAGAGATTTCGGATGCCGCTGGTCTTTGTCAAGGCATTTGGTGCTTGGTGGGAGACTTTAATATGGTCAGATGGATAGAGGATAAGCTCCATGGGCCTAGGATTACCAAAAGCATGAGGGCCTTCAATCGGTTTATAGAGCCTTTTGATCTTATTGATGTTGCGATGTCTAATGGCAGGTTTACTTGGTCCCGAGCAGGTGAAAGGGCAGCGGCTTCGAGGCTGGATAGGATCCTAATATCCAGGCAATGGGCTGAAGCCTTCAAAGAATTCAGGCTTGACCGTCTCCAGAGGCCTACTTCCGACCATTTTCCTTTAGCTTTTGCTGTGGGGGCTATGCAGTGGGGCCCAATGTCGTTCAGATTTGAAAATATGTGGATGAGCCATCCGGGCTTCAAGAAGCAGGTAGAGTTGTGGTGGGCTAAGCTCAATCCGAGGGGTTGGGCTGGATATAGATTTATGGCCAAGCTGAAGGGTTTGAAAGATCACATAAAACAGTGGAACAAAGAAGTTTTCGAAAACTTGAATGAGAAGAAGAAATCCATCCTTGATCAGATTGAAAAATATGACTTGCTCGAAGAACAAGGCCTCATTACCTCCCAGCAAGCGGATGATAGAATGATCCTCAAGTCCTCCCTCCTCGAAATTGCTATGAACGACCAAAGAAGGATGCACCAGAAATCTTTGCCCACATCCCACGGTGGCATTGGAATGGGCGCGTTAGGGCATCGCAATAAGGCCCTCCTCACTAAATGGCTTTGGAGATTTGCCCATGAGGAAAATGCAACTTGGAGAAAAGTAATCAGCAGTATATATGGGATTGAAGATTTTGGTTGGAAAACTAAGAGGACTTACAAAAGGGGCAGCAGGAGAATGTGGCCAGACATTCAAAGAAATCAGCAAAGGTTTGAGGAATTTTCCAAGTTCCAAGTCAGTTGTGGTAACAAAATTAGATTTTGGGAAGATGCTTGGTGTGATCCTAGACCCCTGAACATGGTTTTCCCGGACCTCTTTGACGTTTCCTATAAAAAGAATGCTTCCATTAAGGAGTGTTGGGATGATAATAACCAAACGTGGAACCTTGGGCTGCGTAGGGGGCTCTTTGATCGGGAAGTCAGCAGCTGGGTTGGTTTAACTGAGATGCTGGAAAATATCCAGTTGGGAGATCAGGAAGACAGAATCTTGTGGAAGCTGGAGCCCTCGGGTTGCTTTTCTTGTAAATCTTTGGTTCGGAATTCGATTAGTAGATCGCCTAATATTAGTAAGTCTTTTGTTGGGCAAATTTGGAAGCATAATTCCCCCAAAAAGGTGAAAGTTTTCCTCTGGTCGGTGGCTTATAGGAGCTTGAATACGGATGAGAAAGTGCAAAGTAAGCTCAGAAATTGGTGTCTTTCCCCCTCGGTTTGCAGACTTTGCCTTAGGGAGTCAGAGAATATAGATCATTTGTTCTTACATTGTGTGTTTGCTCAGAGGGCCTGGAATTTTATTGGTGAGTTATTGGGGTTGTCCTTTTGTTTGCCGAAGAGTATAGAGGAGTGGTTAGCTGAGGGCCTGATTGCGTGGAACTTAAAGAATAAGGCTAAAGTGATTGGGGGATGCGCGTTTAGAGCAACCATGTGGCTTTTGTGGAAAGAGAGAAACACTAGAACTTTCGACGATAATTCGTCCTCTTTTGAGTTTTTTGCAAATACTTTTATTGAGGAGAAAGAGACGTCAAATTCATCGAAAATGGTTGTCTTGCATCTGCCAAATGCATCGAATGTGGCGGGTCAGATGGTGCAATCGAGTAGGGGTCACATGAAGAAGGTGGGGTGTCCAACTACTCAAAGTGGTAGGCCAGAAAAAGTTGTGAATCAAGGGAAGCTTATGAAAAACCATCTATGCTCTGCTCCGCAAAGAAATCAAGAGGGAGTTGCTGGGTTTTCGGTCGTTGGAGCATCGTTGGCGAAGAACGGTCAAGTCTACAACGAAGGCTATCGGTTCATGGGAAAGCTAAGAAAACTAAAATGGATTCTAAAATCATGGAATAGGGAGGTCTTTGGGGACTTTCGGATTAAAAAGGAGGAGGCAAGTAGGATTGGTTGTATTGTCGCTTTAGAAGAGATTAGTCAGCTGAAGGAGGCCCTTAAGGAGGAGCGGATGTCTCTTAAGTTGGAGTATGCGATGGTTAAAAAGGACACCAGCCCCATTCCTGAGAAGGAGAAGTGTGGATTGGAGGCTCCCTTTTCAGAGGAAGAGGTTATGAACACGGTCTTCTATGGTGACAAAGACGCGGCCCCAGGGCTTGACGACATCTCCATGACCCTTTTTGATCACTTATAG

Coding sequence (CDS)

GTTCTGGGTGCTGGAGCTCTGTCCAGTGGGGAGGTTAGCATGGCCTCTGATCGACATGGGTCAATGAGGATAGAAAGTAAGGTCTTTTCCTGTGGTTTTGATCGGAATTTTAAAGGGAGGGTGGTCAGAATTACCGAAGTTCATAGGAGAAGAAAGTTCTACATATCTGCTGAAGAAGTTGTGGTTGTCTGGGGAAAGAACAACATTGTCGTCCCAGCTGGGATTGAGTTCAGGGGTTGGAAAGACTTTGCGAACTTGCTGAAAGATTTTGTCAATGGAAAGGTTTTAGATGAAAAGAAGGAAAAAGAGAAACAACCTAATCATCAAAGAACCCGAAAGAAATCCTATGCCGAGGCTATTATATCTGAGGTTAACAACGGAGATGGAACAAAAACATTCTATGGCAAAATTAATGTGGTGCCCGATTATGGAGGGTGGGTGAGAATTAGAAACCTACCGTTGCATTTATGGCACTTGCAAATATTTAAAGCTCTGGGGGACTGTTTGGGTGGTTTTATCGAATATGCTGAACCCAATTCTTTGCTCATTGACTGTGTGGAAGTTGGAATTAGAGTGAAAGGAAACTACTGCGGCTTCATCCCTGGAGAAATCGAGATTGTAGAGGATGATCAGGTCTTCAAAACTCAGATTGTCACCTTTGAGGAAGGGAATATGCTGATTAATCGGATCGTCGGACTTCATGGAAGCTTTTCGCCGGAAGCTGCGCACGCCTTCTACAGAGGCCCCATGGACCCATACTTGAACCCAGTGGATAAATGGAGGATTGAGAATGGTGCCTTTTGCCCACAGGTTAAAACCCAACAGTTACTCGAGGATGGAGAATGCTCATCTCAGGCCAATATAGTATTCAGGGGTGAAAAGGAAGGAGCCCATTGCTATAGTGAGCCGGAGGATAATGAAGGAAACGAGATAGTTCCTCTTTCGTTAGTTGATATGGAGGATGGGCACTATGAGAATAAGCAACAAGATCAAGCTCACCCAAAGGTTCTAGTGATATCGCCTACAGGTAAGGAAAACAGAGCACCCCCCAATATCGAAGGCTTTGTTATCACTAGAGAATTGATCCTCACTTTGAAGAGAAATAATCTGTGCATTCGGCCGATTGCTGGAACCAATGCTAAGAAAGGGTGCACGACAAACAAGCGTAGAAATAGAGAAGTCACGAACCTCCTTCGTAGTTTGGAAAAGGAGGATGATGTAGAGCCCATAAACACCAGGGAAGGCCAAAGTCAACAAGAAGGCGAGGCCATAGATAGGGACGATGAAAATCGGAACTCCACCAGATTGATCGTAGGGTTGTTAAAGCTGTTTGGAGCTCAAGACATGTTGGCTGGGGTTGGATTACTGGGGTGTGGTCCTTGTGACTCGAGGGATAGAAAGTTCTTTCTTCAAGAGATTTCGGATGCCGCTGGTCTTTGTCAAGGCATTTGGTGCTTGGTGGGAGACTTTAATATGGTCAGATGGATAGAGGATAAGCTCCATGGGCCTAGGATTACCAAAAGCATGAGGGCCTTCAATCGGTTTATAGAGCCTTTTGATCTTATTGATGTTGCGATGTCTAATGGCAGGTTTACTTGGTCCCGAGCAGGTGAAAGGGCAGCGGCTTCGAGGCTGGATAGGATCCTAATATCCAGGCAATGGGCTGAAGCCTTCAAAGAATTCAGGCTTGACCGTCTCCAGAGGCCTACTTCCGACCATTTTCCTTTAGCTTTTGCTGTGGGGGCTATGCAGTGGGGCCCAATGTCGTTCAGATTTGAAAATATGTGGATGAGCCATCCGGGCTTCAAGAAGCAGGTAGAGTTGTGGTGGGCTAAGCTCAATCCGAGGGGTTGGGCTGGATATAGATTTATGGCCAAGCTGAAGGGTTTGAAAGATCACATAAAACAGTGGAACAAAGAAGTTTTCGAAAACTTGAATGAGAAGAAGAAATCCATCCTTGATCAGATTGAAAAATATGACTTGCTCGAAGAACAAGGCCTCATTACCTCCCAGCAAGCGGATGATAGAATGATCCTCAAGTCCTCCCTCCTCGAAATTGCTATGAACGACCAAAGAAGGATGCACCAGAAATCTTTGCCCACATCCCACGGTGGCATTGGAATGGGCGCGTTAGGGCATCGCAATAAGGCCCTCCTCACTAAATGGCTTTGGAGATTTGCCCATGAGGAAAATGCAACTTGGAGAAAAGTAATCAGCAGTATATATGGGATTGAAGATTTTGGTTGGAAAACTAAGAGGACTTACAAAAGGGGCAGCAGGAGAATGTGGCCAGACATTCAAAGAAATCAGCAAAGGTTTGAGGAATTTTCCAAGTTCCAAGTCAGTTGTGGTAACAAAATTAGATTTTGGGAAGATGCTTGGTGTGATCCTAGACCCCTGAACATGGTTTTCCCGGACCTCTTTGACGTTTCCTATAAAAAGAATGCTTCCATTAAGGAGTGTTGGGATGATAATAACCAAACGTGGAACCTTGGGCTGCGTAGGGGGCTCTTTGATCGGGAAGTCAGCAGCTGGGTTGGTTTAACTGAGATGCTGGAAAATATCCAGTTGGGAGATCAGGAAGACAGAATCTTGTGGAAGCTGGAGCCCTCGGGTTGCTTTTCTTGTAAATCTTTGGTTCGGAATTCGATTAGTAGATCGCCTAATATTAGTAAGTCTTTTGTTGGGCAAATTTGGAAGCATAATTCCCCCAAAAAGGTGAAAGTTTTCCTCTGGTCGGTGGCTTATAGGAGCTTGAATACGGATGAGAAAGTGCAAAGTAAGCTCAGAAATTGGTGTCTTTCCCCCTCGGTTTGCAGACTTTGCCTTAGGGAGTCAGAGAATATAGATCATTTGTTCTTACATTGTGTGTTTGCTCAGAGGGCCTGGAATTTTATTGGTGAGTTATTGGGGTTGTCCTTTTGTTTGCCGAAGAGTATAGAGGAGTGGTTAGCTGAGGGCCTGATTGCGTGGAACTTAAAGAATAAGGCTAAAGTGATTGGGGGATGCGCGTTTAGAGCAACCATGTGGCTTTTGTGGAAAGAGAGAAACACTAGAACTTTCGACGATAATTCGTCCTCTTTTGAGTTTTTTGCAAATACTTTTATTGAGGAGAAAGAGACGTCAAATTCATCGAAAATGGTTGTCTTGCATCTGCCAAATGCATCGAATGTGGCGGGTCAGATGGTGCAATCGAGTAGGGGTCACATGAAGAAGGTGGGGTGTCCAACTACTCAAAGTGGTAGGCCAGAAAAAGTTGTGAATCAAGGGAAGCTTATGAAAAACCATCTATGCTCTGCTCCGCAAAGAAATCAAGAGGGAGTTGCTGGGTTTTCGGTCGTTGGAGCATCGTTGGCGAAGAACGGTCAAGTCTACAACGAAGGCTATCGGTTCATGGGAAAGCTAAGAAAACTAAAATGGATTCTAAAATCATGGAATAGGGAGGTCTTTGGGGACTTTCGGATTAAAAAGGAGGAGGCAAGTAGGATTGGTTGTATTGTCGCTTTAGAAGAGATTAGTCAGCTGAAGGAGGCCCTTAAGGAGGAGCGGATGTCTCTTAAGTTGGAGTATGCGATGGTTAAAAAGGACACCAGCCCCATTCCTGAGAAGGAGAAGTGTGGATTGGAGGCTCCCTTTTCAGAGGAAGAGGTTATGAACACGGTCTTCTATGGTGACAAAGACGCGGCCCCAGGGCTTGACGACATCTCCATGACCCTTTTTGATCACTTATAG

Protein sequence

VLGAGALSSGEVSMASDRHGSMRIESKVFSCGFDRNFKGRVVRITEVHRRRKFYISAEEVVVVWGKNNIVVPAGIEFRGWKDFANLLKDFVNGKVLDEKKEKEKQPNHQRTRKKSYAEAIISEVNNGDGTKTFYGKINVVPDYGGWVRIRNLPLHLWHLQIFKALGDCLGGFIEYAEPNSLLIDCVEVGIRVKGNYCGFIPGEIEIVEDDQVFKTQIVTFEEGNMLINRIVGLHGSFSPEAAHAFYRGPMDPYLNPVDKWRIENGAFCPQVKTQQLLEDGECSSQANIVFRGEKEGAHCYSEPEDNEGNEIVPLSLVDMEDGHYENKQQDQAHPKVLVISPTGKENRAPPNIEGFVITRELILTLKRNNLCIRPIAGTNAKKGCTTNKRRNREVTNLLRSLEKEDDVEPINTREGQSQQEGEAIDRDDENRNSTRLIVGLLKLFGAQDMLAGVGLLGCGPCDSRDRKFFLQEISDAAGLCQGIWCLVGDFNMVRWIEDKLHGPRITKSMRAFNRFIEPFDLIDVAMSNGRFTWSRAGERAAASRLDRILISRQWAEAFKEFRLDRLQRPTSDHFPLAFAVGAMQWGPMSFRFENMWMSHPGFKKQVELWWAKLNPRGWAGYRFMAKLKGLKDHIKQWNKEVFENLNEKKKSILDQIEKYDLLEEQGLITSQQADDRMILKSSLLEIAMNDQRRMHQKSLPTSHGGIGMGALGHRNKALLTKWLWRFAHEENATWRKVISSIYGIEDFGWKTKRTYKRGSRRMWPDIQRNQQRFEEFSKFQVSCGNKIRFWEDAWCDPRPLNMVFPDLFDVSYKKNASIKECWDDNNQTWNLGLRRGLFDREVSSWVGLTEMLENIQLGDQEDRILWKLEPSGCFSCKSLVRNSISRSPNISKSFVGQIWKHNSPKKVKVFLWSVAYRSLNTDEKVQSKLRNWCLSPSVCRLCLRESENIDHLFLHCVFAQRAWNFIGELLGLSFCLPKSIEEWLAEGLIAWNLKNKAKVIGGCAFRATMWLLWKERNTRTFDDNSSSFEFFANTFIEEKETSNSSKMVVLHLPNASNVAGQMVQSSRGHMKKVGCPTTQSGRPEKVVNQGKLMKNHLCSAPQRNQEGVAGFSVVGASLAKNGQVYNEGYRFMGKLRKLKWILKSWNREVFGDFRIKKEEASRIGCIVALEEISQLKEALKEERMSLKLEYAMVKKDTSPIPEKEKCGLEAPFSEEEVMNTVFYGDKDAAPGLDDISMTLFDHL

Homology

[Close]

BLAST of Spg006174 vs. NCBI nr
Match: CAN61757.1 (hypothetical protein VITISV_030741 [Vitis vinifera])

HSP 1 Score: 312.4 bits (799), Expect = 1.8e-80
Identity = 202/745 (27.11%), Postives = 300/745 (40.27%), Query Frame = 0


Query: 459  GPCDSRDRKFFLQEISDAAGLCQGIWCLVGDFNMVRWIEDKLHGPRITKSMRAFNRFIEP 518
            GP +S  RK F  E+SD  GL    WC+ GDFN++R   +KL G R+T +M+ F+ FI  
Sbjct: 548  GPNNSALRKDFWMELSDIFGLSSPRWCVGGDFNVIRRSSEKLGGSRLTPNMKDFDDFIRD 607

Query: 519  FDLIDVAMSNGRFTWSRAGERAAASRLDRILISRQWAEAFKEFRLDRLQRPTSDHFPLAF 578
             +LID  + +  FTWS                          F  + L R TSDH+ +  
Sbjct: 608  CELIDSPLRSAPFTWS-------------------------NFLQEVLPRWTSDHWLIVL 667

Query: 579  AVGAMQWGPMSFRFENMWMSHPGFKKQVELWWAKLNPRGWAGYRFMAKLKGLKDHIKQWN 638
                 +WGP  FRFENMW+ H  FK+    WW +    GW G++FM KL+ +K  +K+WN
Sbjct: 668  ETNPFKWGPTPFRFENMWLQHLSFKESFGSWWREFQGNGWEGHKFMRKLQFIKAKLKEWN 727

Query: 639  KEVFENLNEKKKSILDQIEKYDLLEEQGLITSQQADDRMILKSSLLEIAMNDQRRMHQKS 698
            K  F  L+++KKSIL  +  +D LE++G ++S+    R + K  L E+ + ++    QK+
Sbjct: 728  KASFGELSKRKKSILSDLANFDTLEQEGGLSSELLVQRALRKGELEELILREEIHWRQKA 787

Query: 699  ------------------------------------------------------------ 758
                                                                        
Sbjct: 788  RVKWVKEGDCNSXFFHKVANGXXNRKXIKELENESGLMLNNSESIKEEILRYFEKLYASP 847

Query: 759  ----------------------------------------LPTS---------------- 818
                                                    LP                  
Sbjct: 848  SGEPWRVEGLDWSPISGESASRLAKMLDYKASGWPILYLGLPMGGNPKACGFWDPVIERI 907

Query: 819  ------------------------------------------------------HGGIGM 878
                                                                    G+G 
Sbjct: 908  SRRLDGWQKAYLSFGGRITLIQSCLTHMPCYFLSLFKILTSVAAKIERLQRDFLWSGVGE 967

Query: 879  GALGH----RNKALLTKWLWRFAHEENATWRKVISSIYGIEDFGWKTKRTYKRGSRRMWP 938
            G   H    RN ALL KWLWR+  E +A W +VI SIYG    GW      +   R  W 
Sbjct: 968  GKRDHLISVRNVALLGKWLWRYPREGSALWHQVILSIYGSHSNGWDVNNNVRWSHRCPWK 1027

Query: 939  DIQRNQQRFEEFSKFQVSCGNKIRFWEDAWCDPRPLNMVFPDLFDVSYKKNASIKECWDD 998
             I    Q F +F++F V  G++IRFW+D W   +PL   +P L  V   KNA I      
Sbjct: 1028 AIALVFQEFSKFTRFVVGDGDRIRFWDDLWWGDQPLGTQYPRLLSVVTDKNALISSILGY 1087

Query: 999  NNQ-TWNLGLRRGLFDREVSSWVGLTEMLENIQLGDQ-EDRILWKLEPSGCFSCKS--LV 1026
            +   +WN   RR L D E+     L   L+ + +     D+  W + PSG F+ KS  L 
Sbjct: 1088 SRPFSWNFNFRRNLTDSEIEDLESLMRSLDRLHISPSVPDKRSWSISPSGLFTVKSFFLA 1147

[Close]

BLAST of Spg006174 vs. NCBI nr
Match: RVW89101.1 (putative ribonuclease H protein [Vitis vinifera])

HSP 1 Score: 306.6 bits (784), Expect = 9.7e-79
Identity = 194/666 (29.13%), Postives = 293/666 (43.99%), Query Frame = 0


Query: 459  GPCDSRDRKFFLQEISDAAGLCQGIWCLVGDFNMVRWIEDKLHGPRITKSMRAFNRFIEP 518
            G    R+R+   +E+ D  GL    WC+ GDFNM+R+  +   G R++ SMR F+  I+ 
Sbjct: 217  GSTMKRNRELLWEELGDIQGLWNDPWCIGGDFNMIRFPNEWRRGGRLSPSMRRFSEVIDD 276

Query: 519  FDLIDVAMSNGRFTWSRAGERAAASRLDRILISRQWAEAFKEFRLDRLQRPTSDHFPLAF 578
             DL D+ +  G FTWS      A SRLDR L+S  W   F       L RP S+HFP+  
Sbjct: 277  LDLRDLPLQGGPFTWSGGLNNQAMSRLDRFLVSEDWEGHFNGVVQSTLPRPVSNHFPILL 336

Query: 579  AVGAMQWGPMSFRFENMWMSHPGFKKQVELWWAKLNPRGWAGYRFMAKLKGLKDHIKQWN 638
              G ++ G + FRFENMW+   GFK  ++ WW  L   G   +    KLK LK  +K WN
Sbjct: 337  DGGGVRRGLVPFRFENMWLKEEGFKDLLKGWWQGLRFSGSFTFILAEKLKALKAILKSWN 396

Query: 639  KEVFENLNEKKKSILDQIEKYDLLEEQGLITSQQADDRMILKSSLLEIAMNDQRRMHQKS 698
            K VF  +   K+  LD+++ +D  E+   ++ ++ + R   K    + A+ ++    QKS
Sbjct: 397  KLVFGKVGVNKRLALDKVDFWDSQEKMRTLSLEELEARKEAKGDFEKWALMEEISWRQKS 456

Query: 699  -----------------LPTSH-------------------------------------- 758
                             +  SH                                      
Sbjct: 457  REVWLREGDRNTGFFHKMANSHRRRSCLSKIKINGNWLTEEQDINGGVVGAFENLLTDPG 516

Query: 759  ------------------------------GGIGMGALGHRNKALLTKWLWRFAHEENAT 818
                                          GG+G+  L   N+ALL KW WRFA+E  A 
Sbjct: 517  DWHPSMEGLDFNRIDGEDGARLEGTFDIRKGGLGVRRLTTLNRALLCKWNWRFANEREAL 576

Query: 819  WRKVISSIYGIEDFGWKTKRTYKRGSRRMWPDIQRNQQRFEEFSKFQVSCGNKIRFWEDA 878
            WR+VI   +G E  GW T+   +     +W +I++     +    F V  G +++FW D 
Sbjct: 577  WRQVIGRKFGEEQGGWYTREVREGFGVGLWKEIRKEGALLQNKVVFSVGNGRRVKFWNDN 636

Query: 879  WCDPRPLNMVFPDLFDVSYKKNASIKECWDDNNQ--TWNLGLRRGLFDREVSSWVGLTEM 938
            WC    L+ +FP L+  +  K A ++E WD +     WN    R   D EV     L   
Sbjct: 637  WCGNFSLSNLFPSLYAFASIKEAWLEELWDHSGDEGVWNPSFSRSFNDWEVEEVERLLLT 696

Query: 939  LENIQLGD-QEDRILWKLEPSGCFSCKSLVRNSISRSPNISKSFVGQIWKHNSPKKVKVF 998
            +   +L    EDR+LWK    G FS KSL  +  SR  ++   +   IW    P KV  F
Sbjct: 697  IRGRRLNPLLEDRMLWKETKDGIFSVKSLYSSLASRR-DVQFPY-SNIWSTCVPTKVSFF 756

Query: 999  LWSVAYRSLNTDEKVQSKLRNWCLSPSVCRLCLRESENIDHLFLHCVFAQRAWNFIGELL 1037
             W   +  + T ++++ + R+     + C LC  E E+IDH+ + C  A+  W  +  L 
Sbjct: 757  AWEAYWGKVLTLDQLKKRGRSLA---NRCFLCGMEEESIDHILIQCSKARGLWELLFALF 816

[Close]

BLAST of Spg006174 vs. NCBI nr
Match: CAN72727.1 (hypothetical protein VITISV_015094 [Vitis vinifera])

HSP 1 Score: 256.5 bits (654), Expect = 1.2e-63
Identity = 199/842 (23.63%), Postives = 286/842 (33.97%), Query Frame = 0


Query: 459  GPCDSRDRKFFLQEISDAAGLCQGIWCLVGDFNMVRWIEDKLHGPRITKSMRAFNRFIEP 518
            GP     RK F  E+ D  GL    WC+ GDFN++R I +K+   R+T +MR F+ FI  
Sbjct: 807  GPNKPLWRKDFWLELQDLYGLTFPRWCVGGDFNVIRRISEKMGDSRLTVNMRCFDEFIRE 866

Query: 519  FDLIDVAMSNGRFTWSRAGERAAASRLDRILISRQWAEAFKEFRLDRLQRPTSDHFPLAF 578
              L+D  + N  FTWS         RLDR L S +W   F +   + L R TSDH P+  
Sbjct: 867  SGLLDPPLRNAAFTWSNMQVDPICKRLDRFLFSSEWDFFFSQSFQEALPRWTSDHSPICL 926

Query: 579  AVGAMQWGPMSFRFENMWMSHPGFKKQVELWWAKLNPRGWAGYRFMAKLKGLKDHIKQWN 638
                ++WG   FRFENMW+ HP FK++   WW +    GW G++FM KLK +K   K+WN
Sbjct: 927  ETNPLKWGRTPFRFENMWLLHPEFKEKFRDWWQECTVEGWEGHKFMRKLKFIKSKXKEWN 986

Query: 639  KEVFENLNEKKKSILDQIEKYDLLEEQGLITSQQADDRMILKSSLLEIAMNDQRRMHQK- 698
               F +L E+KK IL ++ + DL+E++G +      +R + +  L ++ + ++ +  QK 
Sbjct: 987  IVAFGDLRERKKHILSELGRIDLIEQEGNLNLDLVSERTLGRKELEDLLLKEEVQWRQKS 1046

Query: 699  ------------------------------------------------------------ 758
                                                                        
Sbjct: 1047 RVKWIKEGDCNSKFFHRVAIGXRSRKFIKSLISERGKTLSNIEVISEEIVNFFGKFYSKL 1106

Query: 759  ------------------------------------------------------------ 818
                                                                        
Sbjct: 1107 EGDSWRIEGIDWAPISGESAVWLNRPFSEEEVRMAVFQLNKEKALDPDDFTXAVYSRVLG 1166

Query: 819  ------------------------------------------------------------ 878
                                                                        
Sbjct: 1167 CDKRGSYEGRLRKVLHETIFGSQGAFVEGRHILDAVLIANEVVDEKRRSREERVVFKIDF 1226

Query: 879  ------------------------------------------------------------ 938
                                                                        
Sbjct: 1227 EKAYDHMDWAILDHVLQRKGFSQKWRSWMRGCLSSSSFAILVNGNAKGWVKASRVSIVSK 1286

Query: 939  ---------------------------SLPTSHGGIGMGALGHRNKALLTKWLWRFAHEE 998
                                       S P   GG+G G    RN ALL KWLWRF  E 
Sbjct: 1287 IEKMQRDFLWSGAGEGKKDHLIRWEVVSRPKELGGLGFGKTSMRNIALLEKWLWRFPRER 1346

Query: 999  NATWRKVISSIYGIEDFGWKTKRTYKRGSRRMWPDIQRNQQRFEEFSKFQVSCGNKIRFW 1030
            +  W KVI+SIYG    GW                I +  Q+F  F +  V  G +IRFW
Sbjct: 1347 SGLWHKVIASIYGTHPNGWDXNTV----------AIAQVFQKFSPFVRLVVGNGERIRFW 1406

[Close]

BLAST of Spg006174 vs. NCBI nr
Match: CAN62051.1 (hypothetical protein VITISV_016641 [Vitis vinifera])

HSP 1 Score: 255.4 bits (651), Expect = 2.6e-63
Identity = 208/983 (21.16%), Postives = 309/983 (31.43%), Query Frame = 0


Query: 459  GPCDSRDRKFFLQEISDAAGLCQGIWCLVGDFNMVRWIEDKLHGPRITKSMRAFNRFIEP 518
            GP +S  RK F  E+SD AGL    WC+ GDFN++R   +KL G R+T  M+ F+ FI  
Sbjct: 844  GPNNSALRKDFWVELSDIAGLSHPRWCVGGDFNVIRRSSEKLGGSRLTPCMKDFDEFIRD 903

Query: 519  FDLIDVAMSNGRFTWSRAGERAAASRLDRILISRQWAEAFKEFRLDRLQRPTSDHFPLAF 578
             +LID  + +  +TWS   E     RLDR L S +W + F +     L R TSDH+P+  
Sbjct: 904  CELIDSPLRSVSYTWSNMQENPVCKRLDRFLYSNEWEQVFPQSLQGVLPRWTSDHWPIVL 963

Query: 579  AVGAMQWGPMSFRFENMWMSHPGFKKQVELWWAKLNPRGWAGYRFMAKLKGLKDHIKQWN 638
                 +WGP  FRFENMW+ H  FK+    WW++    GW G++FM KL+ +K  +K+WN
Sbjct: 964  ETNPFKWGPTPFRFENMWLQHSSFKENFGRWWSEFQGNGWEGHKFMRKLQFVKAKLKEWN 1023

Query: 639  KEVFENLNEKKKSILDQIEKYDLLEEQGLITSQQADDRMILKSSLLEIAMNDQRRMHQKS 698
            K  F  L++KKK IL  +  +D LE++G ++ +    R   K  L E+ + ++    QK+
Sbjct: 1024 KTSFGELSKKKKDILAVLANFDSLEQEGGLSQELLVQRAFSKGELEELILREEIHWRQKA 1083

Query: 699  ------------------------------------------------------------ 758
                                                                        
Sbjct: 1084 RVKWVKEGDCNSKFFHKVANGRRNRKFIKELENESGLMLNNPESIKEEILKYFEKLYACP 1143

Query: 759  ------------------------------------------------------------ 818
                                                                        
Sbjct: 1144 SRESWRVEGLDWSPIDGESASRLESPFTEEEIYKAIFQMDRDKAPGPDGFTIAVFQDCWD 1203

Query: 819  ------------------------------------------------------------ 878
                                                                        
Sbjct: 1204 VIKEDLVRVFAEFHRSGIINQSTNASFIVLLPKKSISRRISDFRPISLITSLYKIIAKVL 1263

Query: 879  ------------------------------------------------------------ 938
                                                                        
Sbjct: 1264 AGRLRGVLHETIHSTQGAFVQGRQILDAVLIANEIVDEKRRTGEEGVVFKIDFEKAYDHL 1323

Query: 939  ------------------------------------------------------------ 998
                                                                        
Sbjct: 1324 SWDFLDHVLEMKGFSLRWRKWMRGCLSSVSYAVLVNGNAKGWVNLDKSNIYGINIEQNHL 1383

Query: 999  ------------------------------------------------------------ 1026
                                                                        
Sbjct: 1384 SRLAVMLDCKASGWPILYLGLPLGGNPKASGFWDPVIERISRRLDGWQKAYLSFGGRITL 1443

[Close]

BLAST of Spg006174 vs. NCBI nr
Match: CAN83561.1 (hypothetical protein VITISV_024106 [Vitis vinifera])

HSP 1 Score: 253.1 bits (645), Expect = 1.3e-62
Identity = 211/976 (21.62%), Postives = 311/976 (31.86%), Query Frame = 0


Query: 459  GPCDSRDRKFFLQEISDAAGLCQGIWCLVGDFNMVRWIEDKLHGPRITKSMRAFNRFIEP 518
            GP     RK F  E+ D  GL   +WC+ GDFN++R   +K+ G  +T SMR F+ FI  
Sbjct: 745  GPNSPSLRKDFWVELFDIYGLTYPLWCVGGDFNVIRRSSEKMGGSSLTPSMRDFDSFISE 804

Query: 519  FDLIDVAMSNGRFTWSRAGERAAASRLDRILISRQWAEAFKEFRLDRLQRPTSDHFPLAF 578
             +L+D  + N  FTWS   E     RLDR L S +W   F +   + L R TSDH+P+  
Sbjct: 805  CELLDPPLRNASFTWSNMQESPVCKRLDRFLYSNEWGLLFPQGLQEALIRRTSDHWPIVM 864

Query: 579  AVGAMQWGPMSFRFENMWMSHPGFKKQVELWWAKLNPRGWAGYRFMAKLKGLKDHIKQWN 638
                  WGP  FRFENMW+ H  FK+    WW+     GW G++FM +L+ +K  +K+WN
Sbjct: 865  DTNPFMWGPTPFRFENMWLQHTNFKENFRDWWSGFQGIGWEGHKFMRRLQYVKAKLKEWN 924

Query: 639  KEVFENLNEKKKSILDQIEKYDLLEEQGLITSQQADDRMILKSSLLEIAMNDQRRMHQK- 698
            K  F  L EKKKSIL+ +  +D +E++G +       R+  K  L E+ + ++    QK 
Sbjct: 925  KSSFGELKEKKKSILNDLANFDAIEQEGGLNPDLISQRVSRKGELEELILREEIHWRQKA 984

Query: 699  ------------------------------------------------------------ 758
                                                                        
Sbjct: 985  KVKWVKEGDCNSKFYHKVANGRRNRKYIKELENERGLVLKNAERESWGVEGLDWSPISEE 1044

Query: 759  ------------------------------------------------------------ 818
                                                                        
Sbjct: 1045 SALRLESPFTEEEISKAIFQLDRBKAPGPDGFTIAVFQECWDVIKEDLVRVFAEFHRSGI 1104

Query: 819  ------------------------------------------------------------ 878
                                                                        
Sbjct: 1105 INQSTNASFIVLIPKKSLSKRISDFRPISLITSLYKIIAKVLSGRLRGGDKYWNAVLIAN 1164

Query: 879  ------------------------------------------------------------ 938
                                                                        
Sbjct: 1165 EIVDERRRSXEEGVVFKIDFEKAYDHVKWDFLDHVLEKKGFSPRWRKWMSGCLSSVSFAI 1224

Query: 939  ------------------------------------------------------------ 998
                                                                        
Sbjct: 1225 LVNGSAKGWVKASRGLRQGDPLSPFLFTLVADVLSRMLMRAEERNMLEGFRVGRNRTRVS 1284

Query: 999  ------------------------------------------------------------ 1037
                                                                        
Sbjct: 1285 HLQFADDTIFFSNSREEELQTLKSLLLVFGHISGLKVNLNKSSIYGINLDQAHLSRLAEM 1344

[Close]

BLAST of Spg006174 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 3.2e-16
Identity = 92/378 (24.34%), Postives = 148/378 (39.15%), Query Frame = 0


Query: 700  PTSHGGIGMGALGHRNKALLTKWLWRFAHEENATWRKVISSIYGIEDFGWKTKRTYKRGS 759
            P   GG+G+ A    N+AL++K  WR   E+N+ W  V+   Y + +         K   
Sbjct: 95   PKKEGGLGVRAAKSMNRALISKVGWRLLQEKNSLWTLVLQKKYHVGEIRDSRWLIPKGSW 154

Query: 760  RRMWPDIQRNQQRFEEFSKFQV-SCGNKIRFWEDAWCDPRPL----NMVFPDLFDVSYKK 819
               W  I    +         +   G +IRFW D W   +PL    N   P   D    K
Sbjct: 155  SSTWRSIAIGLRDVVSHGVGWIPGDGQQIRFWTDRWVSGKPLLELDNGERPTDCDTVVAK 214

Query: 820  NASIK-ECWD----DNNQTWNLGLRRGLFDREVSSWVGLTEMLENIQLGDQEDRILWKLE 879
            +  I    WD    D   T N  L              L  ++ ++  G   DR+ WK  
Sbjct: 215  DLWIPGRGWDFAKIDPYTTNNTRLE-------------LRAVVLDLVTG-ARDRLSWKFS 274

Query: 880  PSGCFSCKS----LVRNSISRSPNISKSFVGQIWKHNSPKKVKVFLWSVAYRSLNTDEKV 939
              G FS +S    L  + + R PN++ SF   +WK   P++VK FLW V  +++ T+E+ 
Sbjct: 275  QDGQFSVRSAYEMLTVDEVPR-PNMA-SFFNCLWKVRVPERVKTFLWLVGNQAVMTEEE- 334

Query: 940  QSKLRNWCLSPSVCRLCLRESENIDHLFLHCVFAQRAWNFIGELLGLSFCLPKSIEEWLA 999
              + R    + +VC++C    E++ H+   C      W  +           KS+ EWL 
Sbjct: 335  --RHRRHLSASNVCQVCKGGVESMLHVLRDCPAQLGIWVRVVPQRRQQGFFSKSLFEWLY 394

Query: 1000 EGLIAWNLKNKAKVIGGCAFRATMWLLWKERNTRTFDDNS---SSFEFFANTFIEEKETS 1059
            + L   +      +     F   +W  WK R    F +N+      +F     +E     
Sbjct: 395  DNL--GDRSGCEDIPWSTIFAVIIWWGWKWRCGNIFGENTKCRDRVKFVKEWAVEVYRAH 451

Query: 1060 NSSKMVVLHLPNASNVAG 1061
            + + +V +  P    + G
Sbjct: 455  SGNVLVGITQPRVERMIG 451

[Close]

BLAST of Spg006174 vs. ExPASy TrEMBL
Match: A5BTG1 (zf-RVT domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_030741 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 8.6e-81
Identity = 202/745 (27.11%), Postives = 300/745 (40.27%), Query Frame = 0


Query: 459  GPCDSRDRKFFLQEISDAAGLCQGIWCLVGDFNMVRWIEDKLHGPRITKSMRAFNRFIEP 518
            GP +S  RK F  E+SD  GL    WC+ GDFN++R   +KL G R+T +M+ F+ FI  
Sbjct: 548  GPNNSALRKDFWMELSDIFGLSSPRWCVGGDFNVIRRSSEKLGGSRLTPNMKDFDDFIRD 607

Query: 519  FDLIDVAMSNGRFTWSRAGERAAASRLDRILISRQWAEAFKEFRLDRLQRPTSDHFPLAF 578
             +LID  + +  FTWS                          F  + L R TSDH+ +  
Sbjct: 608  CELIDSPLRSAPFTWS-------------------------NFLQEVLPRWTSDHWLIVL 667

Query: 579  AVGAMQWGPMSFRFENMWMSHPGFKKQVELWWAKLNPRGWAGYRFMAKLKGLKDHIKQWN 638
                 +WGP  FRFENMW+ H  FK+    WW +    GW G++FM KL+ +K  +K+WN
Sbjct: 668  ETNPFKWGPTPFRFENMWLQHLSFKESFGSWWREFQGNGWEGHKFMRKLQFIKAKLKEWN 727

Query: 639  KEVFENLNEKKKSILDQIEKYDLLEEQGLITSQQADDRMILKSSLLEIAMNDQRRMHQKS 698
            K  F  L+++KKSIL  +  +D LE++G ++S+    R + K  L E+ + ++    QK+
Sbjct: 728  KASFGELSKRKKSILSDLANFDTLEQEGGLSSELLVQRALRKGELEELILREEIHWRQKA 787

Query: 699  ------------------------------------------------------------ 758
                                                                        
Sbjct: 788  RVKWVKEGDCNSXFFHKVANGXXNRKXIKELENESGLMLNNSESIKEEILRYFEKLYASP 847

Query: 759  ----------------------------------------LPTS---------------- 818
                                                    LP                  
Sbjct: 848  SGEPWRVEGLDWSPISGESASRLAKMLDYKASGWPILYLGLPMGGNPKACGFWDPVIERI 907

Query: 819  ------------------------------------------------------HGGIGM 878
                                                                    G+G 
Sbjct: 908  SRRLDGWQKAYLSFGGRITLIQSCLTHMPCYFLSLFKILTSVAAKIERLQRDFLWSGVGE 967

Query: 879  GALGH----RNKALLTKWLWRFAHEENATWRKVISSIYGIEDFGWKTKRTYKRGSRRMWP 938
            G   H    RN ALL KWLWR+  E +A W +VI SIYG    GW      +   R  W 
Sbjct: 968  GKRDHLISVRNVALLGKWLWRYPREGSALWHQVILSIYGSHSNGWDVNNNVRWSHRCPWK 1027

Query: 939  DIQRNQQRFEEFSKFQVSCGNKIRFWEDAWCDPRPLNMVFPDLFDVSYKKNASIKECWDD 998
             I    Q F +F++F V  G++IRFW+D W   +PL   +P L  V   KNA I      
Sbjct: 1028 AIALVFQEFSKFTRFVVGDGDRIRFWDDLWWGDQPLGTQYPRLLSVVTDKNALISSILGY 1087

Query: 999  NNQ-TWNLGLRRGLFDREVSSWVGLTEMLENIQLGDQ-EDRILWKLEPSGCFSCKS--LV 1026
            +   +WN   RR L D E+     L   L+ + +     D+  W + PSG F+ KS  L 
Sbjct: 1088 SRPFSWNFNFRRNLTDSEIEDLESLMRSLDRLHISPSVPDKRSWSISPSGLFTVKSFFLA 1147

[Close]

BLAST of Spg006174 vs. ExPASy TrEMBL
Match: A0A438HXB1 (Putative ribonuclease H protein OS=Vitis vinifera OX=29760 GN=VvCHDp000001_814 PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 4.7e-79
Identity = 194/666 (29.13%), Postives = 293/666 (43.99%), Query Frame = 0


Query: 459  GPCDSRDRKFFLQEISDAAGLCQGIWCLVGDFNMVRWIEDKLHGPRITKSMRAFNRFIEP 518
            G    R+R+   +E+ D  GL    WC+ GDFNM+R+  +   G R++ SMR F+  I+ 
Sbjct: 217  GSTMKRNRELLWEELGDIQGLWNDPWCIGGDFNMIRFPNEWRRGGRLSPSMRRFSEVIDD 276

Query: 519  FDLIDVAMSNGRFTWSRAGERAAASRLDRILISRQWAEAFKEFRLDRLQRPTSDHFPLAF 578
             DL D+ +  G FTWS      A SRLDR L+S  W   F       L RP S+HFP+  
Sbjct: 277  LDLRDLPLQGGPFTWSGGLNNQAMSRLDRFLVSEDWEGHFNGVVQSTLPRPVSNHFPILL 336

Query: 579  AVGAMQWGPMSFRFENMWMSHPGFKKQVELWWAKLNPRGWAGYRFMAKLKGLKDHIKQWN 638
              G ++ G + FRFENMW+   GFK  ++ WW  L   G   +    KLK LK  +K WN
Sbjct: 337  DGGGVRRGLVPFRFENMWLKEEGFKDLLKGWWQGLRFSGSFTFILAEKLKALKAILKSWN 396

Query: 639  KEVFENLNEKKKSILDQIEKYDLLEEQGLITSQQADDRMILKSSLLEIAMNDQRRMHQKS 698
            K VF  +   K+  LD+++ +D  E+   ++ ++ + R   K    + A+ ++    QKS
Sbjct: 397  KLVFGKVGVNKRLALDKVDFWDSQEKMRTLSLEELEARKEAKGDFEKWALMEEISWRQKS 456

Query: 699  -----------------LPTSH-------------------------------------- 758
                             +  SH                                      
Sbjct: 457  REVWLREGDRNTGFFHKMANSHRRRSCLSKIKINGNWLTEEQDINGGVVGAFENLLTDPG 516

Query: 759  ------------------------------GGIGMGALGHRNKALLTKWLWRFAHEENAT 818
                                          GG+G+  L   N+ALL KW WRFA+E  A 
Sbjct: 517  DWHPSMEGLDFNRIDGEDGARLEGTFDIRKGGLGVRRLTTLNRALLCKWNWRFANEREAL 576

Query: 819  WRKVISSIYGIEDFGWKTKRTYKRGSRRMWPDIQRNQQRFEEFSKFQVSCGNKIRFWEDA 878
            WR+VI   +G E  GW T+   +     +W +I++     +    F V  G +++FW D 
Sbjct: 577  WRQVIGRKFGEEQGGWYTREVREGFGVGLWKEIRKEGALLQNKVVFSVGNGRRVKFWNDN 636

Query: 879  WCDPRPLNMVFPDLFDVSYKKNASIKECWDDNNQ--TWNLGLRRGLFDREVSSWVGLTEM 938
            WC    L+ +FP L+  +  K A ++E WD +     WN    R   D EV     L   
Sbjct: 637  WCGNFSLSNLFPSLYAFASIKEAWLEELWDHSGDEGVWNPSFSRSFNDWEVEEVERLLLT 696

Query: 939  LENIQLGD-QEDRILWKLEPSGCFSCKSLVRNSISRSPNISKSFVGQIWKHNSPKKVKVF 998
            +   +L    EDR+LWK    G FS KSL  +  SR  ++   +   IW    P KV  F
Sbjct: 697  IRGRRLNPLLEDRMLWKETKDGIFSVKSLYSSLASRR-DVQFPY-SNIWSTCVPTKVSFF 756

Query: 999  LWSVAYRSLNTDEKVQSKLRNWCLSPSVCRLCLRESENIDHLFLHCVFAQRAWNFIGELL 1037
             W   +  + T ++++ + R+     + C LC  E E+IDH+ + C  A+  W  +  L 
Sbjct: 757  AWEAYWGKVLTLDQLKKRGRSLA---NRCFLCGMEEESIDHILIQCSKARGLWELLFALF 816

[Close]

BLAST of Spg006174 vs. ExPASy TrEMBL
Match: A5BV05 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_015094 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 5.6e-64
Identity = 199/842 (23.63%), Postives = 286/842 (33.97%), Query Frame = 0


Query: 459  GPCDSRDRKFFLQEISDAAGLCQGIWCLVGDFNMVRWIEDKLHGPRITKSMRAFNRFIEP 518
            GP     RK F  E+ D  GL    WC+ GDFN++R I +K+   R+T +MR F+ FI  
Sbjct: 807  GPNKPLWRKDFWLELQDLYGLTFPRWCVGGDFNVIRRISEKMGDSRLTVNMRCFDEFIRE 866

Query: 519  FDLIDVAMSNGRFTWSRAGERAAASRLDRILISRQWAEAFKEFRLDRLQRPTSDHFPLAF 578
              L+D  + N  FTWS         RLDR L S +W   F +   + L R TSDH P+  
Sbjct: 867  SGLLDPPLRNAAFTWSNMQVDPICKRLDRFLFSSEWDFFFSQSFQEALPRWTSDHSPICL 926

Query: 579  AVGAMQWGPMSFRFENMWMSHPGFKKQVELWWAKLNPRGWAGYRFMAKLKGLKDHIKQWN 638
                ++WG   FRFENMW+ HP FK++   WW +    GW G++FM KLK +K   K+WN
Sbjct: 927  ETNPLKWGRTPFRFENMWLLHPEFKEKFRDWWQECTVEGWEGHKFMRKLKFIKSKXKEWN 986

Query: 639  KEVFENLNEKKKSILDQIEKYDLLEEQGLITSQQADDRMILKSSLLEIAMNDQRRMHQK- 698
               F +L E+KK IL ++ + DL+E++G +      +R + +  L ++ + ++ +  QK 
Sbjct: 987  IVAFGDLRERKKHILSELGRIDLIEQEGNLNLDLVSERTLGRKELEDLLLKEEVQWRQKS 1046

Query: 699  ------------------------------------------------------------ 758
                                                                        
Sbjct: 1047 RVKWIKEGDCNSKFFHRVAIGXRSRKFIKSLISERGKTLSNIEVISEEIVNFFGKFYSKL 1106

Query: 759  ------------------------------------------------------------ 818
                                                                        
Sbjct: 1107 EGDSWRIEGIDWAPISGESAVWLNRPFSEEEVRMAVFQLNKEKALDPDDFTXAVYSRVLG 1166

Query: 819  ------------------------------------------------------------ 878
                                                                        
Sbjct: 1167 CDKRGSYEGRLRKVLHETIFGSQGAFVEGRHILDAVLIANEVVDEKRRSREERVVFKIDF 1226

Query: 879  ------------------------------------------------------------ 938
                                                                        
Sbjct: 1227 EKAYDHMDWAILDHVLQRKGFSQKWRSWMRGCLSSSSFAILVNGNAKGWVKASRVSIVSK 1286

Query: 939  ---------------------------SLPTSHGGIGMGALGHRNKALLTKWLWRFAHEE 998
                                       S P   GG+G G    RN ALL KWLWRF  E 
Sbjct: 1287 IEKMQRDFLWSGAGEGKKDHLIRWEVVSRPKELGGLGFGKTSMRNIALLEKWLWRFPRER 1346

Query: 999  NATWRKVISSIYGIEDFGWKTKRTYKRGSRRMWPDIQRNQQRFEEFSKFQVSCGNKIRFW 1030
            +  W KVI+SIYG    GW                I +  Q+F  F +  V  G +IRFW
Sbjct: 1347 SGLWHKVIASIYGTHPNGWDXNTV----------AIAQVFQKFSPFVRLVVGNGERIRFW 1406

[Close]

BLAST of Spg006174 vs. ExPASy TrEMBL
Match: A5C377 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_016641 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 9.6e-64
Identity = 208/983 (21.16%), Postives = 309/983 (31.43%), Query Frame = 0


Query: 459  GPCDSRDRKFFLQEISDAAGLCQGIWCLVGDFNMVRWIEDKLHGPRITKSMRAFNRFIEP 518
            GP +S  RK F  E+SD AGL    WC+ GDFN++R   +KL G R+T  M+ F+ FI  
Sbjct: 844  GPNNSALRKDFWVELSDIAGLSHPRWCVGGDFNVIRRSSEKLGGSRLTPCMKDFDEFIRD 903

Query: 519  FDLIDVAMSNGRFTWSRAGERAAASRLDRILISRQWAEAFKEFRLDRLQRPTSDHFPLAF 578
             +LID  + +  +TWS   E     RLDR L S +W + F +     L R TSDH+P+  
Sbjct: 904  CELIDSPLRSVSYTWSNMQENPVCKRLDRFLYSNEWEQVFPQSLQGVLPRWTSDHWPIVL 963

Query: 579  AVGAMQWGPMSFRFENMWMSHPGFKKQVELWWAKLNPRGWAGYRFMAKLKGLKDHIKQWN 638
                 +WGP  FRFENMW+ H  FK+    WW++    GW G++FM KL+ +K  +K+WN
Sbjct: 964  ETNPFKWGPTPFRFENMWLQHSSFKENFGRWWSEFQGNGWEGHKFMRKLQFVKAKLKEWN 1023

Query: 639  KEVFENLNEKKKSILDQIEKYDLLEEQGLITSQQADDRMILKSSLLEIAMNDQRRMHQKS 698
            K  F  L++KKK IL  +  +D LE++G ++ +    R   K  L E+ + ++    QK+
Sbjct: 1024 KTSFGELSKKKKDILAVLANFDSLEQEGGLSQELLVQRAFSKGELEELILREEIHWRQKA 1083

Query: 699  ------------------------------------------------------------ 758
                                                                        
Sbjct: 1084 RVKWVKEGDCNSKFFHKVANGRRNRKFIKELENESGLMLNNPESIKEEILKYFEKLYACP 1143

Query: 759  ------------------------------------------------------------ 818
                                                                        
Sbjct: 1144 SRESWRVEGLDWSPIDGESASRLESPFTEEEIYKAIFQMDRDKAPGPDGFTIAVFQDCWD 1203

Query: 819  ------------------------------------------------------------ 878
                                                                        
Sbjct: 1204 VIKEDLVRVFAEFHRSGIINQSTNASFIVLLPKKSISRRISDFRPISLITSLYKIIAKVL 1263

Query: 879  ------------------------------------------------------------ 938
                                                                        
Sbjct: 1264 AGRLRGVLHETIHSTQGAFVQGRQILDAVLIANEIVDEKRRTGEEGVVFKIDFEKAYDHL 1323

Query: 939  ------------------------------------------------------------ 998
                                                                        
Sbjct: 1324 SWDFLDHVLEMKGFSLRWRKWMRGCLSSVSYAVLVNGNAKGWVNLDKSNIYGINIEQNHL 1383

Query: 999  ------------------------------------------------------------ 1026
                                                                        
Sbjct: 1384 SRLAVMLDCKASGWPILYLGLPLGGNPKASGFWDPVIERISRRLDGWQKAYLSFGGRITL 1443

[Close]

BLAST of Spg006174 vs. ExPASy TrEMBL
Match: A5BSZ6 (Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_024106 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 6.2e-63
Identity = 211/976 (21.62%), Postives = 311/976 (31.86%), Query Frame = 0


Query: 459  GPCDSRDRKFFLQEISDAAGLCQGIWCLVGDFNMVRWIEDKLHGPRITKSMRAFNRFIEP 518
            GP     RK F  E+ D  GL   +WC+ GDFN++R   +K+ G  +T SMR F+ FI  
Sbjct: 745  GPNSPSLRKDFWVELFDIYGLTYPLWCVGGDFNVIRRSSEKMGGSSLTPSMRDFDSFISE 804

Query: 519  FDLIDVAMSNGRFTWSRAGERAAASRLDRILISRQWAEAFKEFRLDRLQRPTSDHFPLAF 578
             +L+D  + N  FTWS   E     RLDR L S +W   F +   + L R TSDH+P+  
Sbjct: 805  CELLDPPLRNASFTWSNMQESPVCKRLDRFLYSNEWGLLFPQGLQEALIRRTSDHWPIVM 864

Query: 579  AVGAMQWGPMSFRFENMWMSHPGFKKQVELWWAKLNPRGWAGYRFMAKLKGLKDHIKQWN 638
                  WGP  FRFENMW+ H  FK+    WW+     GW G++FM +L+ +K  +K+WN
Sbjct: 865  DTNPFMWGPTPFRFENMWLQHTNFKENFRDWWSGFQGIGWEGHKFMRRLQYVKAKLKEWN 924

Query: 639  KEVFENLNEKKKSILDQIEKYDLLEEQGLITSQQADDRMILKSSLLEIAMNDQRRMHQK- 698
            K  F  L EKKKSIL+ +  +D +E++G +       R+  K  L E+ + ++    QK 
Sbjct: 925  KSSFGELKEKKKSILNDLANFDAIEQEGGLNPDLISQRVSRKGELEELILREEIHWRQKA 984

Query: 699  ------------------------------------------------------------ 758
                                                                        
Sbjct: 985  KVKWVKEGDCNSKFYHKVANGRRNRKYIKELENERGLVLKNAERESWGVEGLDWSPISEE 1044

Query: 759  ------------------------------------------------------------ 818
                                                                        
Sbjct: 1045 SALRLESPFTEEEISKAIFQLDRBKAPGPDGFTIAVFQECWDVIKEDLVRVFAEFHRSGI 1104

Query: 819  ------------------------------------------------------------ 878
                                                                        
Sbjct: 1105 INQSTNASFIVLIPKKSLSKRISDFRPISLITSLYKIIAKVLSGRLRGGDKYWNAVLIAN 1164

Query: 879  ------------------------------------------------------------ 938
                                                                        
Sbjct: 1165 EIVDERRRSXEEGVVFKIDFEKAYDHVKWDFLDHVLEKKGFSPRWRKWMSGCLSSVSFAI 1224

Query: 939  ------------------------------------------------------------ 998
                                                                        
Sbjct: 1225 LVNGSAKGWVKASRGLRQGDPLSPFLFTLVADVLSRMLMRAEERNMLEGFRVGRNRTRVS 1284

Query: 999  ------------------------------------------------------------ 1037
                                                                        
Sbjct: 1285 HLQFADDTIFFSNSREEELQTLKSLLLVFGHISGLKVNLNKSSIYGINLDQAHLSRLAEM 1344

The following BLAST results are available for this feature:

BLAST of Spg006174 vs. NCBI nr


Match Name	E-value	Identity	Description
CAN61757.1	1.8e-80	27.11	hypothetical protein VITISV_030741 [Vitis vinifera]	[more]
RVW89101.1	9.7e-79	29.13	putative ribonuclease H protein [Vitis vinifera]	[more]
CAN72727.1	1.2e-63	23.63	hypothetical protein VITISV_015094 [Vitis vinifera]	[more]
CAN62051.1	2.6e-63	21.16	hypothetical protein VITISV_016641 [Vitis vinifera]	[more]
CAN83561.1	1.3e-62	21.62	hypothetical protein VITISV_024106 [Vitis vinifera]	[more]

BLAST of Spg006174 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0C2F6	3.2e-16	24.34	Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]

BLAST of Spg006174 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A5BTG1	8.6e-81	27.11	zf-RVT domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_030741 PE=...	[more]
A0A438HXB1	4.7e-79	29.13	Putative ribonuclease H protein OS=Vitis vinifera OX=29760 GN=VvCHDp000001_814 P...	[more]
A5BV05	5.6e-64	23.63	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_015094 PE=4 SV=1	[more]
A5C377	9.6e-64	21.16	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_016641 PE=4 SV=1	[more]
A5BSZ6	6.2e-63	21.62	Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VI...	[more]

BLAST of Spg006174 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 1169..1196
None	No IPR available	COILS	Coil	Coil	coord: 645..665
None	No IPR available	GENE3D	3.30.2450.30		coord: 11..136 e-value: 4.0E-5 score: 25.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 401..428
None	No IPR available	PANTHER	PTHR33710	BNAC02G09200D PROTEIN	coord: 470..672
None	No IPR available	PANTHER	PTHR33710:SF28	SUBFAMILY NOT NAMED	coord: 470..672
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	GENE3D	3.60.10.10	Endonuclease/exonuclease/phosphatase	coord: 442..579 e-value: 1.7E-17 score: 66.0
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 459..577
IPR026960	Reverse transcriptase zinc-binding domain	PFAM	PF13966	zf-RVT	coord: 874..963 e-value: 5.6E-14 score: 52.6

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg006174.1	Spg006174.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050789	regulation of biological process
cellular_component	GO:0110165	cellular anatomical entity