Spg005810 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg005810
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRNase H domain-containing protein
Locationscaffold11: 1121387 .. 1122227 (-)
RNA-Seq ExpressionSpg005810
SyntenySpg005810
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTGGGTGTGGAAGGTCCAAAAAGGTATGTGATAGTATGTTTGCACGGGTGGATGCTCAAATTCCGATACGGAATAATTTTCTTGATCGAATTATTTGGCTTGCAAAGCATCTTGGAAGAGAGGAATTTGAGCGAGCTTGCATCACATTTTGGTCTCTGTGGAATGATAGAAATAATTTCAACAACAATGTACCTCTTATGGATTTTTCAAAACGTTGTGAATGGATTTGTGACTATTGGGAAAAGACAAGAAATGCGCAGATGGTAACTAAATCCACAAGGGTGAGGGACAAAGAGATTTCGGTGATGGAAAGGCAGGAGGAGTACGCAGGCATAAACGGTGATGTCGTCTACTTGTACACAGATGCTGCTGTTCGGACTTGTGTAATAGGAGTAGGATTTGGAGTTGTTATAACGAGACCGCAAGGTGGTTTAGTTGCCGCAATGGAATTGATGAAACCATCAGCGTTGTCTCCTTTAGCGGCAGAGGTGAATGCTATAATTCATGACATTCGTTTGCATACAGCGTATGCAGATATCGAAGGCAGTTGTGTATTCGGACTCCAATAATGCGATTATGATGATTCGCGACGAAACCCAAATTACGACTGATGTATATCATTGGATTCTTCGAATTCGAACGATGTCTGCAGCATTTGAAGCCTTAACTTTTTACCATGTGCCTCGAGAAGATAACAAGAGGGCGGACTTTCTAGCAAAACGTGCTTTAGATCGACGGAACTGCATGCTTTGGTTAGGAAATTTTCCACCTGAGATAGATTCAATGAGTGATTTCTCTCTATGCAATTGTAATGTTCTATGTTCTTGTTCAACTTAA

mRNA sequence

ATGTGTGGGTGTGGAAGGTCCAAAAAGGTATGTGATAGTATGTTTGCACGGGTGGATGCTCAAATTCCGATACGGAATAATTTTCTTGATCGAATTATTTGGCTTGCAAAGCATCTTGGAAGAGAGGAATTTGAGCGAGCTTGCATCACATTTTGGTCTCTGTGGAATGATAGAAATAATTTCAACAACAATGTACCTCTTATGGATTTTTCAAAACGTTGTGAATGGATTTGTGACTATTGGGAAAAGACAAGAAATGCGCAGATGGTAACTAAATCCACAAGGGTGAGGGACAAAGAGATTTCGGTGATGGAAAGGCAGGAGGAGTACGCAGGCATAAACGGTGATGTCGTCTACTTGTACACAGATGCTGCTGTTCGGACTTGTGTAATAGGAGTAGGATTTGGAGTTGTTATAACGAGACCGCAAGGTGGTTTAGTTGCCGCAATGGAATTGATGAAACCATCAGCGTTGTCTCCTTTAGCGGCAGAGATATCGAAGGCAGTTGTGTATTCGGACTCCAATAATGCGATTATGATGATTCGCGACGAAACCCAAATTACGACTGATGTATATCATTGGATTCTTCGAATTCGAACGATGTCTGCAGCATTTGAAGCCTTAACTTTTTACCATGTGCCTCGAGAAGATAACAAGAGGGCGGACTTTCTAGCAAAACGTGCTTTAGATCGACGGAACTGCATGCTTTGGTTAGGAAATTTTCCACCTGAGATAGATTCAATGAGTGATTTCTCTCTATGCAATTGTAATGTTCTATGTTCTTGTTCAACTTAA

Coding sequence (CDS)

ATGTGTGGGTGTGGAAGGTCCAAAAAGGTATGTGATAGTATGTTTGCACGGGTGGATGCTCAAATTCCGATACGGAATAATTTTCTTGATCGAATTATTTGGCTTGCAAAGCATCTTGGAAGAGAGGAATTTGAGCGAGCTTGCATCACATTTTGGTCTCTGTGGAATGATAGAAATAATTTCAACAACAATGTACCTCTTATGGATTTTTCAAAACGTTGTGAATGGATTTGTGACTATTGGGAAAAGACAAGAAATGCGCAGATGGTAACTAAATCCACAAGGGTGAGGGACAAAGAGATTTCGGTGATGGAAAGGCAGGAGGAGTACGCAGGCATAAACGGTGATGTCGTCTACTTGTACACAGATGCTGCTGTTCGGACTTGTGTAATAGGAGTAGGATTTGGAGTTGTTATAACGAGACCGCAAGGTGGTTTAGTTGCCGCAATGGAATTGATGAAACCATCAGCGTTGTCTCCTTTAGCGGCAGAGATATCGAAGGCAGTTGTGTATTCGGACTCCAATAATGCGATTATGATGATTCGCGACGAAACCCAAATTACGACTGATGTATATCATTGGATTCTTCGAATTCGAACGATGTCTGCAGCATTTGAAGCCTTAACTTTTTACCATGTGCCTCGAGAAGATAACAAGAGGGCGGACTTTCTAGCAAAACGTGCTTTAGATCGACGGAACTGCATGCTTTGGTTAGGAAATTTTCCACCTGAGATAGATTCAATGAGTGATTTCTCTCTATGCAATTGTAATGTTCTATGTTCTTGTTCAACTTAA

Protein sequence

MCGCGRSKKVCDSMFARVDAQIPIRNNFLDRIIWLAKHLGREEFERACITFWSLWNDRNNFNNNVPLMDFSKRCEWICDYWEKTRNAQMVTKSTRVRDKEISVMERQEEYAGINGDVVYLYTDAAVRTCVIGVGFGVVITRPQGGLVAAMELMKPSALSPLAAEISKAVVYSDSNNAIMMIRDETQITTDVYHWILRIRTMSAAFEALTFYHVPREDNKRADFLAKRALDRRNCMLWLGNFPPEIDSMSDFSLCNCNVLCSCST
Homology
BLAST of Spg005810 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])

HSP 1 Score: 98.6 bits (244), Expect = 8.6e-17
Identity = 73/256 (28.52%), Postives = 117/256 (45.70%), Query Frame = 0

Query: 4    CGRSKKVCDSMFARVDAQIPIRN-NFLDRIIWLAKHLGREEFERACITFWSLWNDRNNFN 63
            C R++++  ++F  +       N +FL+    L + L  ++   A IT W +WNDRN+  
Sbjct: 1190 CKRARQIWRTLFPFLTCLSAEDNISFLELWSSLTEQLEPKDLNLAAITGWGIWNDRNSLI 1249

Query: 64   NNVPLMDFSKRCEWICDYWEKTRNAQMVTKSTRVRDKEISVMERQEEYAGINGDVVYLYT 123
            +   +     +CEW+  + +    AQM   S R +     V++     + ++   + L T
Sbjct: 1250 HGKQVSPVEFKCEWLTPFLDSHSQAQMSNYSPRTQSNHRPVVQYWRPSSSVS---LKLNT 1309

Query: 124  DAAVRTCVIGVGFGVVITRPQGGLVAAMELMKPSALSPLAAEI---------------SK 183
            DAA R       FG +I      LVAA  +  P  LSPL AEI               + 
Sbjct: 1310 DAACRGA--STSFGCIIRDSSCSLVAATSIRVPFPLSPLLAEIRCILEGLKFAAASNFTH 1369

Query: 184  AVVYSDSNNAIMMIRDETQITTDVYHWILRIRTMSAAFEALTFYHVPREDNKRADFLAKR 243
              V SDS  AI +IR+E     D  +W++ I+ ++  F  ++F H  R+ N+ A  LAK 
Sbjct: 1370 LEVESDSLLAIQLIRNEIHTRGDEQNWVMEIQALTCCFAFISFSHSSRQCNRAAHGLAKW 1429

BLAST of Spg005810 vs. NCBI nr
Match: XP_024046732.1 (uncharacterized protein LOC112101057 [Citrus clementina])

HSP 1 Score: 77.0 bits (188), Expect = 2.7e-10
Identity = 61/260 (23.46%), Postives = 107/260 (41.15%), Query Frame = 0

Query: 4   CGRSKKVCDSMFARVDAQIPIRNNFLDRIIWLAKHLGREEFERACITFWSLWNDRNNF-- 63
           C  ++KV    +   + Q  +R   L  +  L K +   E E   + +W +W+ RN    
Sbjct: 130 CKVARKVWKYSYLASEMQEVVREGILSVMQSLIKKMSMREVEFVAVVWWEIWHARNKLIF 189

Query: 64  -NNNVPLMDFSKRCEWICDYWEKTRNAQMVTKSTRVRDKEISVMERQEEYAGINGDVVYL 123
               V  M    + +   + +++    +  +K    R +++S   +Q+++         +
Sbjct: 190 EGKRVNPMSLIAKAQAAVEAYQRVHGKEQTSK----RSEDVS---KQDQWCPPPVGFYKV 249

Query: 124 YTDAAVRTCVIGVGFGVVITRPQGGLV---------------AAMELMKPSALSPLAAEI 183
             DAAV T     G GVVI  PQG ++               A  E +K      L A +
Sbjct: 250 NVDAAVHTEQQLTGLGVVIRNPQGQVIVTAVKSTKFQDNVTAAEAEAVKWGLEIALEARL 309

Query: 184 SKAVVYSDSNNAIMMIRDETQITTDVYHWILRIRTMSAAFEALTFYHVPREDNKRADFLA 243
           +  ++ +D      +   +T    ++   I  I +    F++L+  HVPR  N  A  LA
Sbjct: 310 AAVIIETDCIEVANLANSKTSSRKEIVWTISDIHSYKEKFQSLSIQHVPRCCNSCAHSLA 369

Query: 244 KRALDRRNCMLWLGNFPPEI 246
           KRAL     + W  NFPP++
Sbjct: 370 KRALRSSETVTWKDNFPPDV 382

BLAST of Spg005810 vs. NCBI nr
Match: XP_015385025.1 (uncharacterized protein LOC107176703 [Citrus sinensis])

HSP 1 Score: 77.0 bits (188), Expect = 2.7e-10
Identity = 61/260 (23.46%), Postives = 108/260 (41.54%), Query Frame = 0

Query: 4   CGRSKKVCDSMFARVDAQIPIRNNFLDRIIWLAKHLGREEFERACITFWSLWNDRNNF-- 63
           C  ++KV    +   + Q  +R + L  +  L K +   E E   + +W +W+ RN    
Sbjct: 3   CKVARKVWKYSYLASEMQGVVREDILSVMQSLIKKMSMREVEFVAVVWWEVWHARNKLIF 62

Query: 64  -NNNVPLMDFSKRCEWICDYWEKTRNAQMVTKSTRVRDKEISVMERQEEYAGINGDVVYL 123
               V  M    + +   + +++    +  +K    R +++S   +Q+++         +
Sbjct: 63  EGKRVNPMSLIAKAQAAVEAYQRVHGKEQTSK----RSEDVS---KQDQWCPPPVGFYKV 122

Query: 124 YTDAAVRTCVIGVGFGVVITRPQGGLVAA---------------MELMKPSALSPLAAEI 183
             DAAV T     G GVVI  PQG ++ A                E +K      L A +
Sbjct: 123 NVDAAVHTEQQLTGLGVVIRNPQGQIIVAAIKSTKFQDNVTAAEAEAVKWGLEIALEARL 182

Query: 184 SKAVVYSDSNNAIMMIRDETQITTDVYHWILRIRTMSAAFEALTFYHVPREDNKRADFLA 243
           +  ++ +D      +   +T    ++   I  I +    F++L+  HVPR  N  A  LA
Sbjct: 183 AAVIIETDCIEVANLANSKTSSKKEIMWTISDIHSYKEKFQSLSIQHVPRCCNSCAHSLA 242

Query: 244 KRALDRRNCMLWLGNFPPEI 246
           KRAL     + W  NFPP++
Sbjct: 243 KRALRSLETVTWKDNFPPDV 255

BLAST of Spg005810 vs. NCBI nr
Match: XP_024950112.1 (uncharacterized protein LOC112496847 [Citrus sinensis])

HSP 1 Score: 76.6 bits (187), Expect = 3.5e-10
Identity = 62/230 (26.96%), Postives = 104/230 (45.22%), Query Frame = 0

Query: 35   LAKHLGREEFERACITFWSLWNDRNN--FNNNV--PLMDFSKRCEWICDYWEKTRNAQMV 94
            +AK L + + E      WS W  RN   F+     P++  +K  E +   +++ R  Q  
Sbjct: 1163 MAKELRKSDLELMVALCWSAWYARNKCIFDGRELNPIISAAK-AESVLTAFQRVRKPQQS 1222

Query: 95   TKSTRVRDKEISVMERQEEYAGINGDVVYLYTDAAVRTCVIGVGFGVVITRPQGGLVAA- 154
              S       IS+ E+Q+E+     +V  +  DAA  +  +  G G VI    G +VAA 
Sbjct: 1223 HIS-------ISIKEKQQEWLPPPQNVFKVNVDAAFNSKNLSAGVGAVIRDSNGKIVAAG 1282

Query: 155  --MELMKPSALSPLA------------AEISKAVVYSDSNNAIMMIRDETQITTDVYHWI 214
                L+K SA    A            A++S  ++ SD    + ++ +     ++++  I
Sbjct: 1283 VNQNLLKGSASLAEAEAVLWGLQLARNADVSSLIIESDCLEVVQLVNNTKGSRSEIFWTI 1342

Query: 215  LRIRTMSAAFEALTFYHVPREDNKRADFLAKRALDRRNCMLWLGNFPPEI 246
            L I+     F+ +   H+PR  N  A +LAK AL + +  +WLGN P E+
Sbjct: 1343 LAIQNQMKIFQKVVVNHIPRHCNACAHYLAKIALGKISPCMWLGNIPAEL 1384

BLAST of Spg005810 vs. NCBI nr
Match: XP_024033146.1 (uncharacterized protein LOC112095446 [Citrus clementina])

HSP 1 Score: 76.6 bits (187), Expect = 3.5e-10
Identity = 61/260 (23.46%), Postives = 108/260 (41.54%), Query Frame = 0

Query: 4   CGRSKKVCDSMFARVDAQIPIRNNFLDRIIWLAKHLGREEFERACITFWSLWNDRNNF-- 63
           C  ++KV    +   + Q  +R + L  +  L K +   E E   + +W +W+ RN    
Sbjct: 3   CKVARKVWKYSYLASEMQGVVREDILSVMQSLIKKMSMREVEFVAVVWWEIWHARNKLIF 62

Query: 64  -NNNVPLMDFSKRCEWICDYWEKTRNAQMVTKSTRVRDKEISVMERQEEYAGINGDVVYL 123
               V  M    + +   + +++    +  +K    R +++S   +Q+++         +
Sbjct: 63  EGKRVNPMSLIAKAQAAVEAYQRVHGKEQTSK----RSEDVS---KQDQWFPPPVGFYKV 122

Query: 124 YTDAAVRTCVIGVGFGVVITRPQGGLVAA---------------MELMKPSALSPLAAEI 183
             DAAV T     G GVVI  PQG ++ A                E +K      L A +
Sbjct: 123 NVDAAVHTEQQLTGLGVVIRNPQGQIIVAAVKSTKFQDNVTAAEAEAVKWGLEIALEARL 182

Query: 184 SKAVVYSDSNNAIMMIRDETQITTDVYHWILRIRTMSAAFEALTFYHVPREDNKRADFLA 243
           +  ++ +D      +   +T    ++   I  I +    F++L+  HVPR  N  A  LA
Sbjct: 183 ATVIIETDCIEVANLANSKTSSRKEIMWTISDIHSYKEKFQSLSIQHVPRCCNSCAHSLA 242

Query: 244 KRALDRRNCMLWLGNFPPEI 246
           KRAL     + W  NFPP++
Sbjct: 243 KRALRSLETVTWKDNFPPDV 255

BLAST of Spg005810 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 4.1e-17
Identity = 73/256 (28.52%), Postives = 117/256 (45.70%), Query Frame = 0

Query: 4    CGRSKKVCDSMFARVDAQIPIRN-NFLDRIIWLAKHLGREEFERACITFWSLWNDRNNFN 63
            C R++++  ++F  +       N +FL+    L + L  ++   A IT W +WNDRN+  
Sbjct: 1190 CKRARQIWRTLFPFLTCLSAEDNISFLELWSSLTEQLEPKDLNLAAITGWGIWNDRNSLI 1249

Query: 64   NNVPLMDFSKRCEWICDYWEKTRNAQMVTKSTRVRDKEISVMERQEEYAGINGDVVYLYT 123
            +   +     +CEW+  + +    AQM   S R +     V++     + ++   + L T
Sbjct: 1250 HGKQVSPVEFKCEWLTPFLDSHSQAQMSNYSPRTQSNHRPVVQYWRPSSSVS---LKLNT 1309

Query: 124  DAAVRTCVIGVGFGVVITRPQGGLVAAMELMKPSALSPLAAEI---------------SK 183
            DAA R       FG +I      LVAA  +  P  LSPL AEI               + 
Sbjct: 1310 DAACRGA--STSFGCIIRDSSCSLVAATSIRVPFPLSPLLAEIRCILEGLKFAAASNFTH 1369

Query: 184  AVVYSDSNNAIMMIRDETQITTDVYHWILRIRTMSAAFEALTFYHVPREDNKRADFLAKR 243
              V SDS  AI +IR+E     D  +W++ I+ ++  F  ++F H  R+ N+ A  LAK 
Sbjct: 1370 LEVESDSLLAIQLIRNEIHTRGDEQNWVMEIQALTCCFAFISFSHSSRQCNRAAHGLAKW 1429

BLAST of Spg005810 vs. ExPASy TrEMBL
Match: A0A7J6HMG9 (RNase H domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_005744 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 9.3e-09
Identity = 52/228 (22.81%), Postives = 99/228 (43.42%), Query Frame = 0

Query: 30  DRIIWLAKHLGREEFERACITFWSLWNDRNNFNNNVPLMDFSKRCEWICDYWEKTRNAQM 89
           D ++ + + + R EFE      W++W +RN   N +P M+  +   W+ + + K     +
Sbjct: 3   DVLLAVEQRVNRSEFEDTIKVLWAIWENRNRKWNQLPSMNGQQLLNWVFNAYPK-----V 62

Query: 90  VTKSTRVRDKEISVMERQEEYAGINGDVVYLYTDAAVRTCVIGVGFGVVITRPQGGLVAA 149
            T    V  K+       + +       + + +DAAV+   +GVG G +  +  G L++A
Sbjct: 63  TTVDPMVVQKKADAPPNPKHWIPPESGCICVNSDAAVKDNAVGVGLGFIWRKANGQLLSA 122

Query: 150 MELMKPSALS---------------PLAAEISKAVVYSDSNNAIMMIRDETQITTDVYHW 209
             +  PS  S               P AA+ S+  V +D    +  I+ +    T   + 
Sbjct: 123 GMIYMPSLYSVKMAEAWALLEALKKPPAADTSQIAVQTDCRLLVEEIKGQGNSLTVESNI 182

Query: 210 ILRIRTMSAAFEALTFYHVPREDNKRADFLAKRALDRRNCMLWLGNFP 243
           I +I  +   F ++   HV R +N+ A+ LA++ L  +    +  +FP
Sbjct: 183 IHKIHMVLETFNSVNISHVKRINNECANLLARKCLVDKTTQFFDNSFP 225

BLAST of Spg005810 vs. ExPASy TrEMBL
Match: A0A7J6G5T3 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_025848 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 9.3e-09
Identity = 50/217 (23.04%), Postives = 92/217 (42.40%), Query Frame = 0

Query: 41  REEFERACITFWSLWNDRNNFNNNVPLMDFSKRCEWICDYWEKTRNAQMVTKSTRVRDKE 100
           R+EFE      W++W +RN   N +P M+  +   W+ + + K     +         K+
Sbjct: 163 RDEFEDTIKVLWAIWENRNRQWNQIPSMNGQQLLNWVFNAYPKASTVDLT-----AGQKK 222

Query: 101 ISVMERQEEYAGINGDVVYLYTDAAVRTCVIGVGFGVVITRPQGGLVAAMELMKPSALS- 160
           + V    + +   +   + + +DAA+     GVG G V     G L++A  +  PS  S 
Sbjct: 223 VDVYPNPKHWIPPDSGCICVNSDAAINENTAGVGLGFVWRTASGQLLSAGMVYMPSLCSV 282

Query: 161 --------------PLAAEISKAVVYSDSNNAIMMIRDETQITTDVYHWILRIRTMSAAF 220
                         P A + S+  V +D    +  I+ +  I T   + I ++  +   F
Sbjct: 283 KMAEAWALLEALKKPPAIDTSQIAVQTDCKLLVEEIKTQGNILTAERNIIHKLNRVLETF 342

Query: 221 EALTFYHVPREDNKRADFLAKRALDRRNCMLWLGNFP 243
            ++  +HV R +NK A+ LA++ L  +    +   FP
Sbjct: 343 NSVHIFHVKRTNNKCANLLARKCLADKTTQFFDNAFP 374

BLAST of Spg005810 vs. ExPASy TrEMBL
Match: A0A7J6E4T6 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_005047 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.2e-08
Identity = 57/228 (25.00%), Postives = 98/228 (42.98%), Query Frame = 0

Query: 30  DRIIWLAKHLGREEFERACITFWSLWNDRNNFNNNVPLMDFSKRCEWICDYWEKTRNAQM 89
           D+I  + K L   EFE      W++W +RN   N++P M+  +   W+   + K      
Sbjct: 48  DKIKNIWKLLPWSEFEDIVKVLWAIWENRNRKWNHLPSMNRQQLMNWLFSAYPKA----- 107

Query: 90  VTKSTRVRDKEISVMERQEEYAGINGDVVYLYTDAAVRTCVIGVGFGVVITRPQGGLVAA 149
            T  T    KE  V   Q+ +       + + +DAAV   V GVG G +  +  G L++A
Sbjct: 108 TTTETIAVQKEAGVPPNQKHWIPPTSGCICVNSDAAVLDNVAGVGLGFIWRKADGQLLSA 167

Query: 150 MELMKPSALS---------------PLAAEISKAVVYSDSNNAIMMIRDETQITTDVYHW 209
             +   S  S               P AAE ++  +       +  I+D+ +  T   + 
Sbjct: 168 GMIYMHSICSVKMAEAWAILEALKTPPAAETNQIEIQMYCRMLVEEIKDQGKRFTAESNI 227

Query: 210 ILRIRTMSAAFEALTFYHVPREDNKRADFLAKRALDRRNCMLWLGNFP 243
           I +I  +   F ++   HV R +N+ A+ LA++ LD +    +  +FP
Sbjct: 228 IHKIHNVLETFTSVNIIHVKRTNNECANLLARKCLDDKTTQFFDNSFP 270

BLAST of Spg005810 vs. ExPASy TrEMBL
Match: A0A803NGI9 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 2.7e-08
Identity = 61/264 (23.11%), Postives = 107/264 (40.53%), Query Frame = 0

Query: 4    CGRSKKVCDSMFARVDAQIPIRNNFLDRIIWLAKHLGREEFERACITFWSLWNDRNNFNN 63
            C  +KKV       ++  +  R +F D ++ L+      E E+   T W LWNDRNNF +
Sbjct: 864  CKHAKKVWRVAGISLNFDLVSRMSFADFLMLLSTLKSTSEMEQLLCTLWFLWNDRNNFIH 923

Query: 64   NVPLMD----FSKRCEWICDYWEKTRNAQMVTKSTRVRDKEISVMERQEEYAGINGDVVY 123
              P +     ++K   + C++ +++ +++ +  ST            Q  +     D + 
Sbjct: 924  GKPGLSPTQLWAKSVAYFCNFQQQSTSSKSIRDSTGA--------AAQPHWISPPLDKLK 983

Query: 124  LYTDAAVRTCVIGVGFGVVITRPQGGLVAAMELMKPSALSPLAAE--------------- 183
            +  DAA       +G G++I    G +VAA        L P   E               
Sbjct: 984  MNVDAACDISRNKIGVGIIIRNSSGQVVAAYSKPLTGRLKPQEMEAKALLIGINWAARCN 1043

Query: 184  ISKAVVYSDSNNAIMMIRDETQITTDVYHWILRIRTMSAAFEALTFYHVPREDNKRADFL 243
            +S  +  SDS   +  I   +   +     +L I+   +   ++   HV R+ N+ A  L
Sbjct: 1044 LSINLFESDSLILVNSINSISNAISSFGDLVLDIKNRLSYLSSVCVSHVKRDANQAAHGL 1103

Query: 244  AKRALDRRNCMLWLGNFPPEIDSM 249
            AK AL+  +  +W    P  I S+
Sbjct: 1104 AKHALELDDDCMWFEEIPSTIFSV 1119

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022158377.18.6e-1728.52uncharacterized protein LOC111024874 [Momordica charantia][more]
XP_024046732.12.7e-1023.46uncharacterized protein LOC112101057 [Citrus clementina][more]
XP_015385025.12.7e-1023.46uncharacterized protein LOC107176703 [Citrus sinensis][more]
XP_024950112.13.5e-1026.96uncharacterized protein LOC112496847 [Citrus sinensis][more]
XP_024033146.13.5e-1023.46uncharacterized protein LOC112095446 [Citrus clementina][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DX304.1e-1728.52uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A7J6HMG99.3e-0922.81RNase H domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_005744 PE=... [more]
A0A7J6G5T39.3e-0923.04Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_025848 PE=4 SV=1[more]
A0A7J6E4T61.2e-0825.00Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_005047 PE=4 SV=1[more]
A0A803NGI92.7e-0823.11Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 163..228
e-value: 2.8E-9
score: 36.8
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 117..235
e-value: 4.3E-11
score: 44.9
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 117..232

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg005810.1Spg005810.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity