Spg005796 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg005796
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	RING-CH-type domain-containing protein
Location	scaffold11: 1417052 .. 1419754 (+)
RNA-Seq Expression	Spg005796
Synteny	Spg005796

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAAAGGAGACTGTAGATTCATGATCCTTAAATGATCGGAAAAGGCTGCAAATTCTGTCTCTTGCATCCCTTTCCTCTTTTGCGTCTCCTTCAACCATCACTGTTCTTGTCACACTTTTTTCTTTTCATTTTCATTTTTTTAATTTTCTTTTCTCTTCGATCTTCAGCAATCGAAACTGACACGCCGAAAAAGAGTTTCACTGTGTGTCTGTATTTGTTTGCGAGAGACGAACCTGATATTATCCTTTGATCTTCGATAGAGAGAGAGAGAGACTGAGAGAAAACCAACAAATCAACAAACAGACAAAAACCCATAACCCCACGTTTGCTCTCTCTCTCTCTCTCTCTCTTAATGCAACTCCAAAGGGTTTTCATCAGACACTAATCTCATGGTTAAAAGGGAAGATTCTATGGGGGCTGAGCTTTTGATTTGCTGGGTGTTATGAATTTTTCACATTCTTGTTTGTGGTATTTCTTCTGGATTTTGATTTCGTGTTGTACATTCTGAAAATTTTGAATGGAATCTGTTCATGATTACGAGTAGAAAGGGTTTCGGTTCCTTAATCTTTTCATCTTGCTGGGACCGCCATGCTTTCCTGCACTGTTTCTTAATACATATCTTTTGGTTTTCGCCACTCGAATGCCATTTCCCCATCTGGGTTTCGCAGGATGTCGGCGGTTGAAGCTCCCCGTGGTGACCCAGACCCTGCAAATCTCAGTTCTCTGCCATTTCGCGATGCTCGTTCAGCAGCTGATAGCGGCAGCGACGTGTCGGTACTTGATGACTCCGACGACCAGTCGTGGCACTCGGTTTTCGACTCCACGGCTTGGGGATCTCACGGCGAGGGCCGGTTTTCCGGCGAGATAGAGGGCGTTCCGGACGCTGAGATGGGCCATTTCATCTCGGAGAGCTCGTCGGAGGTGGATTTGGAGAGCGGGGATTTGGAGGTGAAGGTGCATTTGGGGAAGATTGAAAGAGATTGCAGAATTTGTCACTTGGAGCTGGAAAACGGTGGAGGAAGAGATAATTCTGATACTCCAATTCAGCTTGGTTGTTGCTGTCGAGGTGATTTGGGTACTGCCCACAAGCAATGTGCTGAGACTTGGTTCAAAATCAAGGGAAATACGTAAGTAATTACTCTGTTGAACTTCCATTTTTCCATCAGATTTCATCCCCTTTTAAAACCCAGTTCTTACTTTTGTTTCTCTATCTCTCTTCAATACTTTGAATCTTTTGATCGTCAGTGGTTTTGATGTAGTTTTGCCTAGACTTGAATTAGCTTAGCTCTTGCAAGAAGTTCAATCTGAAACACATCGAAAATCTTAGCTTCTAAAAGATAAGAAGACTGTTTTTCTAGGGCAATGAACTTAAAATCTCCTCTGTTTCTTGTTTTGAGCAACAATTCACTTCAGTCTTCTGCCATGAATCCCCCCCAAATACTTCTATTCTTTTGATTCATTATGACTACAAAACTTGAGTCAGATCTTCTGCAGACAGTAATTGGTTTTCTTAACAGTACTTGAGAAGTAATCAACTCAATTCTGGTGGATTCTATCTGTTCTGACTTCTAAGTTTTTCAAATTTAGCTTTGGTCAGTATCAAGTTGAATATCTCATTTTTTTTCCTCTACTTCAATAATATGAAGGTGTCACACTTAAAGTTCCTACAAATTTCCATGTGTCGAAGTTGAACTTACAAACTTGTCCTTAGCTAATCTGTTTCATCTCCTTTTTGATAACATAGATCAGATACATGTGACCTTTTTTCTGACAGTTGGGAATTGGGCAGATTAATTAGAATTCTAGTTAGAAACCTTAAATCACAACTAGATCTTGTCTGTGAGAATTAATATATTGTTATTAAGTTAATGTATTTTCATATTGCAAGGTTGCTGATGGTTGGTTCATCAGCCGAAAACAGGTGTAAAACTTAAGGGACTCTATATGTATTCGATTTTTTGTTCGAGCACGACTTTGCTCGATCATAGAACTATTTTCTATATATCTTGAAGGAGTCGTAGATCGATTAACTCTCTAGATAGGAACGTTCAACCGACCATGTTCAGATTTTTTTGCTGGTTGGTGTATATCAAATCCTTATGCTAGATGACCTTGTTGTTATGACTAGTAACTTGACAAGCAATATGATCTTTTCTGGCAGAATTTGTGAGATATGTGGGGCAACTGCACAGAACGTTGCAAGTCAGCAAATAAATGAACCAAGCAACGGGGTTGCGGCTGCAGTAGCCTCCTCAGCTCCAACGGCGCCCCTGACTCTCGTCGAGACTCGAACGATCTTTCACGGTCGCCGCATTATGAACTTTCTGCTTGCTTGCATGCTCCTTGCATTTGCAATGTCCTGGCTTTTTCACTTCAAGTTAATGTCATAGGATTTAGGAAGATCACCTACACCTACTGGAGGAAGAAAATTAATGAAGAATGAAAATTTGGGTTCTTTAGGCTTTTGTGTATATATTTACACTTTTGTTTTGTTTTGTCGATTTTGATGAGGCTGGTTTCATTAGGCATTTCTGAGTTGTAGTGTGGTGAAAGCATAGGGCTCAATAAATATAAGTACATCTCTCTAAATCTATGTTGCTCAAAATATGTTTTTTTTTTCTGACAAGAGCAACTGCACAAGAGAGGAGGACTGACTTGATGGGATTTTTTAGAGAAAATATCAAGAATAATTATAAAATCAC

mRNA sequence

ATGAATTTTTCACATTCTTGTTTGTGGATGTCGGCGGTTGAAGCTCCCCGTGGTGACCCAGACCCTGCAAATCTCAGTTCTCTGCCATTTCGCGATGCTCGTTCAGCAGCTGATAGCGGCAGCGACGTGTCGGTACTTGATGACTCCGACGACCAGTCGTGGCACTCGGTTTTCGACTCCACGGCTTGGGGATCTCACGGCGAGGGCCGGTTTTCCGGCGAGATAGAGGGCGTTCCGGACGCTGAGATGGGCCATTTCATCTCGGAGAGCTCGTCGGAGGTGGATTTGGAGAGCGGGGATTTGGAGGTGAAGGTGCATTTGGGGAAGATTGAAAGAGATTGCAGAATTTGTCACTTGGAGCTGGAAAACGGTGGAGGAAGAGATAATTCTGATACTCCAATTCAGCTTGGTTGTTGCTGTCGAGGTGATTTGGGTACTGCCCACAAGCAATGTGCTGAGACTTGGTTCAAAATCAAGGGAAATACAATTTGTGAGATATGTGGGGCAACTGCACAGAACGTTGCAAGTCAGCAAATAAATGAACCAAGCAACGGGGTTGCGGCTGCAGTAGCCTCCTCAGCTCCAACGGCGCCCCTGACTCTCGTCGAGACTCGAACGATCTTTCACGGTCGCCGCATTATGAACTTTCTGCTTGCTTGCATGCTCCTTGCATTTGCAATGTCCTGGCTTTTTCACTTCAAGTTAATGTCATAG

Coding sequence (CDS)

ATGAATTTTTCACATTCTTGTTTGTGGATGTCGGCGGTTGAAGCTCCCCGTGGTGACCCAGACCCTGCAAATCTCAGTTCTCTGCCATTTCGCGATGCTCGTTCAGCAGCTGATAGCGGCAGCGACGTGTCGGTACTTGATGACTCCGACGACCAGTCGTGGCACTCGGTTTTCGACTCCACGGCTTGGGGATCTCACGGCGAGGGCCGGTTTTCCGGCGAGATAGAGGGCGTTCCGGACGCTGAGATGGGCCATTTCATCTCGGAGAGCTCGTCGGAGGTGGATTTGGAGAGCGGGGATTTGGAGGTGAAGGTGCATTTGGGGAAGATTGAAAGAGATTGCAGAATTTGTCACTTGGAGCTGGAAAACGGTGGAGGAAGAGATAATTCTGATACTCCAATTCAGCTTGGTTGTTGCTGTCGAGGTGATTTGGGTACTGCCCACAAGCAATGTGCTGAGACTTGGTTCAAAATCAAGGGAAATACAATTTGTGAGATATGTGGGGCAACTGCACAGAACGTTGCAAGTCAGCAAATAAATGAACCAAGCAACGGGGTTGCGGCTGCAGTAGCCTCCTCAGCTCCAACGGCGCCCCTGACTCTCGTCGAGACTCGAACGATCTTTCACGGTCGCCGCATTATGAACTTTCTGCTTGCTTGCATGCTCCTTGCATTTGCAATGTCCTGGCTTTTTCACTTCAAGTTAATGTCATAG

Protein sequence

MNFSHSCLWMSAVEAPRGDPDPANLSSLPFRDARSAADSGSDVSVLDDSDDQSWHSVFDSTAWGSHGEGRFSGEIEGVPDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELENGGGRDNSDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNGVAAAVASSAPTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS

Homology

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BLAST of Spg005796 vs. NCBI nr
Match: XP_011658411.1 (uncharacterized protein LOC101212160 isoform X2 [Cucumis sativus])

HSP 1 Score: 432.6 bits (1111), Expect = 2.2e-117
Identity = 217/228 (95.18%), Postives = 220/228 (96.49%), Query Frame = 0


Query: 10  MSAVEAPRGDPDPANLSSLPFRDARSAADSGSDVSVLDDSDDQSWHSVFDSTAWGSHGEG 69
           MSAVEAPRGD DPAN SSLPFRDARSAA S SD+SVLDDSDDQSWHSVFDSTAWGSHGEG
Sbjct: 1   MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG 60

Query: 70  RFSGEIEGVPDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELENGGGRDN 129
           +FSGEIEGVPDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELE+ GGRDN
Sbjct: 61  QFSGEIEGVPDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN 120

Query: 130 SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNGVAAA 189
           SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSN VA A
Sbjct: 121 SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVATA 180

Query: 190 VASSAPTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 238
           VASSA TAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS
Sbjct: 181 VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 228

[Close]

BLAST of Spg005796 vs. NCBI nr
Match: XP_004145266.2 (uncharacterized protein LOC101212160 isoform X1 [Cucumis sativus] >KGN65776.1 hypothetical protein Csa_023291 [Cucumis sativus])

HSP 1 Score: 432.6 bits (1111), Expect = 2.2e-117
Identity = 217/228 (95.18%), Postives = 220/228 (96.49%), Query Frame = 0


Query: 10  MSAVEAPRGDPDPANLSSLPFRDARSAADSGSDVSVLDDSDDQSWHSVFDSTAWGSHGEG 69
           MSAVEAPRGD DPAN SSLPFRDARSAA S SD+SVLDDSDDQSWHSVFDSTAWGSHGEG
Sbjct: 50  MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG 109

Query: 70  RFSGEIEGVPDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELENGGGRDN 129
           +FSGEIEGVPDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELE+ GGRDN
Sbjct: 110 QFSGEIEGVPDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN 169

Query: 130 SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNGVAAA 189
           SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSN VA A
Sbjct: 170 SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVATA 229

Query: 190 VASSAPTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 238
           VASSA TAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS
Sbjct: 230 VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 277

[Close]

BLAST of Spg005796 vs. NCBI nr
Match: XP_008457415.1 (PREDICTED: uncharacterized protein LOC103497107 isoform X2 [Cucumis melo])

HSP 1 Score: 430.3 bits (1105), Expect = 1.1e-116
Identity = 217/228 (95.18%), Postives = 220/228 (96.49%), Query Frame = 0


Query: 10  MSAVEAPRGDPDPANLSSLPFRDARSAADSGSDVSVLDDSDDQSWHSVFDSTAWGSHGEG 69
           MSAVEAPRGD DPAN SSLPFRDARSAA S SD+SVLDDSDDQSWHSVFDSTAWGSHGEG
Sbjct: 1   MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG 60

Query: 70  RFSGEIEGVPDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELENGGGRDN 129
           +FSGEIEGV DAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELE+ GGRDN
Sbjct: 61  QFSGEIEGVLDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN 120

Query: 130 SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNGVAAA 189
           SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSN VAAA
Sbjct: 121 SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVAAA 180

Query: 190 VASSAPTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 238
           VASSA TAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS
Sbjct: 181 VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 228

[Close]

BLAST of Spg005796 vs. NCBI nr
Match: XP_008457414.1 (PREDICTED: uncharacterized protein LOC103497107 isoform X1 [Cucumis melo] >KAA0031780.1 E3 ubiquitin-protein ligase MARCH1 [Cucumis melo var. makuwa] >TYJ97351.1 E3 ubiquitin-protein ligase MARCH1 [Cucumis melo var. makuwa])

HSP 1 Score: 430.3 bits (1105), Expect = 1.1e-116
Identity = 217/228 (95.18%), Postives = 220/228 (96.49%), Query Frame = 0


Query: 10  MSAVEAPRGDPDPANLSSLPFRDARSAADSGSDVSVLDDSDDQSWHSVFDSTAWGSHGEG 69
           MSAVEAPRGD DPAN SSLPFRDARSAA S SD+SVLDDSDDQSWHSVFDSTAWGSHGEG
Sbjct: 49  MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG 108

Query: 70  RFSGEIEGVPDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELENGGGRDN 129
           +FSGEIEGV DAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELE+ GGRDN
Sbjct: 109 QFSGEIEGVLDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN 168

Query: 130 SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNGVAAA 189
           SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSN VAAA
Sbjct: 169 SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVAAA 228

Query: 190 VASSAPTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 238
           VASSA TAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS
Sbjct: 229 VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 276

[Close]

BLAST of Spg005796 vs. NCBI nr
Match: XP_038895035.1 (uncharacterized protein LOC120083374 [Benincasa hispida] >XP_038895036.1 uncharacterized protein LOC120083374 [Benincasa hispida])

HSP 1 Score: 428.3 bits (1100), Expect = 4.2e-116
Identity = 215/228 (94.30%), Postives = 219/228 (96.05%), Query Frame = 0


Query: 10  MSAVEAPRGDPDPANLSSLPFRDARSAADSGSDVSVLDDSDDQSWHSVFDSTAWGSHGEG 69
           MSAVEAPRGDPDPAN SS+ FRDARSAA S SD+SVLDDSDDQSWHSVFDSTAWGSHGEG
Sbjct: 1   MSAVEAPRGDPDPANPSSVLFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG 60

Query: 70  RFSGEIEGVPDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELENGGGRDN 129
           +FSGEIEGVPDAEMGHFISE SSEVDLESGDLEVKVHLGKIERDCRICHLELE+GGGRDN
Sbjct: 61  QFSGEIEGVPDAEMGHFISECSSEVDLESGDLEVKVHLGKIERDCRICHLELESGGGRDN 120

Query: 130 SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNGVAAA 189
            DTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSN VAAA
Sbjct: 121 FDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVAAA 180

Query: 190 VASSAPTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 238
           V SSA TAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS
Sbjct: 181 VPSSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 228

[Close]

BLAST of Spg005796 vs. ExPASy TrEMBL
Match: A0A0A0M0P0 (RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G527920 PE=4 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 1.1e-117
Identity = 217/228 (95.18%), Postives = 220/228 (96.49%), Query Frame = 0


Query: 10  MSAVEAPRGDPDPANLSSLPFRDARSAADSGSDVSVLDDSDDQSWHSVFDSTAWGSHGEG 69
           MSAVEAPRGD DPAN SSLPFRDARSAA S SD+SVLDDSDDQSWHSVFDSTAWGSHGEG
Sbjct: 50  MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG 109

Query: 70  RFSGEIEGVPDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELENGGGRDN 129
           +FSGEIEGVPDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELE+ GGRDN
Sbjct: 110 QFSGEIEGVPDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN 169

Query: 130 SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNGVAAA 189
           SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSN VA A
Sbjct: 170 SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVATA 229

Query: 190 VASSAPTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 238
           VASSA TAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS
Sbjct: 230 VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 277

[Close]

BLAST of Spg005796 vs. ExPASy TrEMBL
Match: A0A5D3BFF6 (E3 ubiquitin-protein ligase MARCH1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001610 PE=4 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 5.4e-117
Identity = 217/228 (95.18%), Postives = 220/228 (96.49%), Query Frame = 0


Query: 10  MSAVEAPRGDPDPANLSSLPFRDARSAADSGSDVSVLDDSDDQSWHSVFDSTAWGSHGEG 69
           MSAVEAPRGD DPAN SSLPFRDARSAA S SD+SVLDDSDDQSWHSVFDSTAWGSHGEG
Sbjct: 49  MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG 108

Query: 70  RFSGEIEGVPDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELENGGGRDN 129
           +FSGEIEGV DAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELE+ GGRDN
Sbjct: 109 QFSGEIEGVLDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN 168

Query: 130 SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNGVAAA 189
           SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSN VAAA
Sbjct: 169 SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVAAA 228

Query: 190 VASSAPTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 238
           VASSA TAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS
Sbjct: 229 VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 276

[Close]

BLAST of Spg005796 vs. ExPASy TrEMBL
Match: A0A1S3C517 (uncharacterized protein LOC103497107 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497107 PE=4 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 5.4e-117
Identity = 217/228 (95.18%), Postives = 220/228 (96.49%), Query Frame = 0


Query: 10  MSAVEAPRGDPDPANLSSLPFRDARSAADSGSDVSVLDDSDDQSWHSVFDSTAWGSHGEG 69
           MSAVEAPRGD DPAN SSLPFRDARSAA S SD+SVLDDSDDQSWHSVFDSTAWGSHGEG
Sbjct: 1   MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG 60

Query: 70  RFSGEIEGVPDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELENGGGRDN 129
           +FSGEIEGV DAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELE+ GGRDN
Sbjct: 61  QFSGEIEGVLDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN 120

Query: 130 SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNGVAAA 189
           SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSN VAAA
Sbjct: 121 SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVAAA 180

Query: 190 VASSAPTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 238
           VASSA TAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS
Sbjct: 181 VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 228

[Close]

BLAST of Spg005796 vs. ExPASy TrEMBL
Match: A0A1S3C6R6 (uncharacterized protein LOC103497107 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497107 PE=4 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 5.4e-117
Identity = 217/228 (95.18%), Postives = 220/228 (96.49%), Query Frame = 0


Query: 10  MSAVEAPRGDPDPANLSSLPFRDARSAADSGSDVSVLDDSDDQSWHSVFDSTAWGSHGEG 69
           MSAVEAPRGD DPAN SSLPFRDARSAA S SD+SVLDDSDDQSWHSVFDSTAWGSHGEG
Sbjct: 49  MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG 108

Query: 70  RFSGEIEGVPDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELENGGGRDN 129
           +FSGEIEGV DAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELE+ GGRDN
Sbjct: 109 QFSGEIEGVLDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN 168

Query: 130 SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNGVAAA 189
           SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSN VAAA
Sbjct: 169 SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVAAA 228

Query: 190 VASSAPTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 238
           VASSA TAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS
Sbjct: 229 VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 276

[Close]

BLAST of Spg005796 vs. ExPASy TrEMBL
Match: A0A6J1I103 (uncharacterized protein LOC111469521 OS=Cucurbita maxima OX=3661 GN=LOC111469521 PE=4 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 5.1e-107
Identity = 204/231 (88.31%), Postives = 211/231 (91.34%), Query Frame = 0


Query: 10  MSAVEAPRGDPDPANLSSLPFRDARSAA---DSGSDVSVLDDSDDQSWHSVFDSTAWGSH 69
           MSAV APRGDP  A+ SSLP+RDARSAA    S SD+SVLDDSDDQSWHSVFDSTAWGSH
Sbjct: 1   MSAVLAPRGDPILADPSSLPYRDARSAAGSSSSSSDLSVLDDSDDQSWHSVFDSTAWGSH 60

Query: 70  GEGRFSGEIEGVPDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELENGGG 129
           G+G FSGEIEGVPDAE G FIS SSSEVDLESGDLEVKVHLGKIERDCRICHLELE+GGG
Sbjct: 61  GDGLFSGEIEGVPDAETGGFISGSSSEVDLESGDLEVKVHLGKIERDCRICHLELESGGG 120

Query: 130 RDNSDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNGV 189
           RD +DTPI LGCCCRGDLGTAHK CAETWFKIKGNTICEICGA AQNVASQQINEPSN  
Sbjct: 121 RDYNDTPILLGCCCRGDLGTAHKHCAETWFKIKGNTICEICGAAAQNVASQQINEPSNLA 180

Query: 190 AAAVASSAPTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 238
           AAAVASSA TAPLTL+ETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS
Sbjct: 181 AAAVASSAMTAPLTLIETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 231

[Close]

BLAST of Spg005796 vs. TAIR 10
Match: AT5G05830.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 146.7 bits (369), Expect = 2.3e-35
Identity = 89/188 (47.34%), Postives = 110/188 (58.51%), Query Frame = 0


Query: 64  GSHGEG---RFSGEIEG----VPDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRI 123
           G  G+G   R SG +E     V D E     S  S E+DLE G  E  VHL + ERDCRI
Sbjct: 22  GCDGDGEPRRSSGAVEKEEEIVKDEERRSNASVCSVEIDLELGLPEKVVHLSQSERDCRI 81

Query: 124 CHLELENGGGRDNSDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVA- 183
           CH+ L+       S  PI+LGC C+ DL  AHK CAETWFKIKGN ICE+CG+ A NV  
Sbjct: 82  CHMSLD--AANLESGVPIELGCSCKADLAAAHKHCAETWFKIKGNKICEVCGSIAGNVVG 141

Query: 184 -----SQQINEPSNGVA-AAVASSAPTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSW 238
                S++    +NGV    + +S P     LVE R+ + G R +NFLLACM+ AF +SW
Sbjct: 142 SVEVESEESRNEANGVENLTLRTSGP----RLVEGRSFWQGHRFLNFLLACMVFAFVISW 201

[Close]

BLAST of Spg005796 vs. TAIR 10
Match: AT5G59000.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 137.5 bits (345), Expect = 1.4e-32
Identity = 85/198 (42.93%), Postives = 105/198 (53.03%), Query Frame = 0


Query: 89  ESSSEVDLESGDL---EVKVHLG------------------KIERDCRICHLELENGGGR 148
           +S S+VDLESG +   E ++H G                  K  RDCRICHL LE     
Sbjct: 35  DSLSQVDLESGGVPAPEKQLHSGGKKRRTRRRKRRKKKKKKKGGRDCRICHLPLETNKEA 94

Query: 149 DNSD-----------------------------TPIQLGCCCRGDLGTAHKQCAETWFKI 208
           ++ D                              P+QLGC C+GDLG AH +CAETWFKI
Sbjct: 95  EDEDEEEEDDSDDDEDEEDEEEEEEEEEEEYYGLPLQLGCSCKGDLGVAHSKCAETWFKI 154

Query: 209 KGNTICEICGATAQNVASQQINEPSNGVAAAVASSAPTAPLTLVETRTIFHGRRIMNFLL 237
           KGN  CEICGA A NVA +Q N  S   A+  + +A    LT  E R I+HGR +MNFLL
Sbjct: 155 KGNMTCEICGAMALNVAGEQSNPES--TASTHSQAAAGQSLTQTEPRGIWHGRPVMNFLL 214

[Close]

BLAST of Spg005796 vs. TAIR 10
Match: AT2G37950.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 123.6 bits (309), Expect = 2.1e-28
Identity = 83/208 (39.90%), Postives = 111/208 (53.37%), Query Frame = 0


Query: 40  GSDVSVL--DDSDDQSWHSVFDSTAWGSHGEGRFSGEIEGVPDAEMGHFISESSSEVDLE 99
           GSDVSV   D  D  S +S F ST  GS+       E EG    ++   +S SSSE+D +
Sbjct: 22  GSDVSVYYSDGEDVMSCYSYFYSTTGGSY-------EYEGDQSRKVSSVMSPSSSEIDDD 81

Query: 100 SGDLEVKVHLGKIERDCRICHLELENGGGRDNSDTPIQLGCCCRGDLGTAHKQCAETWFK 159
                        E+DCRICHL +E  GG       I+LGC C+ DL  AH+QCAETWFK
Sbjct: 82  DA-------TAPPEKDCRICHLGVETSGG-----GAIELGCSCKDDLAVAHRQCAETWFK 141

Query: 160 IKGNTICEICGATAQNV--------ASQQINEPSNGVAAAVASSAPTAPLTLVETRTIFH 219
           IKG+  CEIC + A+NV        ++ +  E  NG   A          T+VE R  + 
Sbjct: 142 IKGDKTCEICQSVARNVGGANEMVGSTMEERELRNGEETAAGEGGGA---TVVENR--WQ 201

Query: 220 GRRIMNFLLACMLLAFAMSWLFHFKLMS 238
            +R++N +LACM+  F +SW+FHF + S
Sbjct: 202 PQRVVNLVLACMVFGFFISWIFHFHVSS 205

[Close]

BLAST of Spg005796 vs. TAIR 10
Match: AT5G01070.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 114.8 bits (286), Expect = 9.7e-26
Identity = 82/212 (38.68%), Postives = 104/212 (49.06%), Query Frame = 0


Query: 31  RDARSAADSGSDVSVLDDSDDQSWHSVFDSTAWGSHGEGRFSGEIEGVPDAEMGHFISES 90
           R  R +  SG D S  D   D  +HS   S          F GE E   D      + + 
Sbjct: 18  RQYRPSDVSGEDSSSCD--YDYDFHSAVRS----------FCGEFEIADD------LDDE 77

Query: 91  SSEVDLESGDLEVKVHLGKIERDCRICHLELENGGGRDNSDTPIQLGCCCRGDLGTAHKQ 150
           +    + SG +      G  E+DCRICHL LE+   R     P+ LGC C+ DLG  HKQ
Sbjct: 78  TDTESVASGSIR-----GSPEKDCRICHLGLES--SRHECGDPMVLGCSCKDDLGYVHKQ 137

Query: 151 CAETWFKIKGNTICEICGATAQNV--ASQQINEPS--NGVAAAVASSAPTAPLTL-VETR 210
           CA+TWFKIKGN  CEIC + AQN      +I + +    V    A + PT   T   + R
Sbjct: 138 CADTWFKIKGNKTCEICRSIAQNFFKVDNEIGQTTVETNVDDVEAGNTPTMVATSDSDDR 197

Query: 211 TIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 238
            +  G R +NFLL CM+ AF +SW FHF L S
Sbjct: 198 RLCRGNRFLNFLLTCMVCAFVISWFFHFNLPS 204

[Close]

BLAST of Spg005796 vs. TAIR 10
Match: AT2G34200.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 81.3 bits (199), Expect = 1.2e-15
Identity = 36/69 (52.17%), Postives = 47/69 (68.12%), Query Frame = 0


Query: 111 ERDCRICHL---ELENGGGRDNSDTP--IQLGCCCRGDLGTAHKQCAETWFKIKGNTICE 170
           ER CRICH    +     G D S +P  I++GC C+ +LG AH  CAE WFK++GN++CE
Sbjct: 99  ERICRICHFGSDQSPEASGDDKSVSPELIEIGCKCKNELGLAHFHCAEAWFKLRGNSVCE 158

Query: 171 ICGATAQNV 175
           ICG TA+NV
Sbjct: 159 ICGCTAKNV 167

The following BLAST results are available for this feature:

BLAST of Spg005796 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011658411.1	2.2e-117	95.18	uncharacterized protein LOC101212160 isoform X2 [Cucumis sativus]	[more]
XP_004145266.2	2.2e-117	95.18	uncharacterized protein LOC101212160 isoform X1 [Cucumis sativus] >KGN65776.1 hy...	[more]
XP_008457415.1	1.1e-116	95.18	PREDICTED: uncharacterized protein LOC103497107 isoform X2 [Cucumis melo]	[more]
XP_008457414.1	1.1e-116	95.18	PREDICTED: uncharacterized protein LOC103497107 isoform X1 [Cucumis melo] >KAA00...	[more]
XP_038895035.1	4.2e-116	94.30	uncharacterized protein LOC120083374 [Benincasa hispida] >XP_038895036.1 unchara...	[more]

BLAST of Spg005796 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg005796 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M0P0	1.1e-117	95.18	RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G52792...	[more]
A0A5D3BFF6	5.4e-117	95.18	E3 ubiquitin-protein ligase MARCH1 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3C517	5.4e-117	95.18	uncharacterized protein LOC103497107 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3C6R6	5.4e-117	95.18	uncharacterized protein LOC103497107 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1I103	5.1e-107	88.31	uncharacterized protein LOC111469521 OS=Cucurbita maxima OX=3661 GN=LOC111469521...	[more]

BLAST of Spg005796 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05830.1	2.3e-35	47.34	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G59000.1	1.4e-32	42.93	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G37950.1	2.1e-28	39.90	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G01070.2	9.7e-26	38.68	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G34200.1	1.2e-15	52.17	RING/FYVE/PHD zinc finger superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 113..168 e-value: 2.6E-15 score: 66.9
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 114..167 e-value: 2.2E-9 score: 37.3
IPR011016	Zinc finger, RING-CH-type	PROSITE	PS51292	ZF_RING_CH	coord: 106..174 score: 19.093723
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 104..179 e-value: 3.1E-15 score: 57.5
None	No IPR available	PANTHER	PTHR46214:SF5	OS01G0850200 PROTEIN	coord: 37..235
None	No IPR available	PANTHER	PTHR46214	ZINC FINGER, RING-CH-TYPE	coord: 37..235
None	No IPR available	CDD	cd16495	RING_CH-C4HC3_MARCH	coord: 114..168 e-value: 5.50175E-12 score: 56.952
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 111..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg005796.1	Spg005796.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008270	zinc ion binding