Spg005788 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg005788
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Flagellar hook-associated protein like
Location	scaffold11: 2828991 .. 2829410 (-)
RNA-Seq Expression	Spg005788
Synteny	Spg005788

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTCCGTCTGCATATCAGAATGCGTCGACAACGCCTGCATCGTCCCCGCCGCCCGCCCGACGTACGTGAACCTGCAGCGGTGGCCGGAGGAGGAGAACGGCTCTGCAGAGCGCCGCCGGCCACGGCCGAGAGCGCCGGAGGGTATCTCTCGCCGGCAAATGTACCTGAGGAGCTACACCTTCTCCAGAGAGGACACCGCCGTCCCTGAGAGTACAACTCAGAACTGCCTTGGGAAGCTCAGGCCGACGCGGAGGCCGGCGGAGATCCGCGGCGGCCTGAGGAGGAGGAGGAGCCGCTGTTTCGCCGTCGTGAGGTCCGCCGCCAAGCAGGCTTCTTCCGGTGCTTTGTTCTCGATGTTCCGACGGTTGCTTTGTTGCGTGGCGAAAGTCGACGGTCGCGGCCGTAAGCATTTGTGA

mRNA sequence

ATGGCCTCCGTCTGCATATCAGAATGCGTCGACAACGCCTGCATCGTCCCCGCCGCCCGCCCGACGTACGTGAACCTGCAGCGGTGGCCGGAGGAGGAGAACGGCTCTGCAGAGCGCCGCCGGCCACGGCCGAGAGCGCCGGAGGGTATCTCTCGCCGGCAAATGTACCTGAGGAGCTACACCTTCTCCAGAGAGGACACCGCCGTCCCTGAGAGTACAACTCAGAACTGCCTTGGGAAGCTCAGGCCGACGCGGAGGCCGGCGGAGATCCGCGGCGGCCTGAGGAGGAGGAGGAGCCGCTGTTTCGCCGTCGTGAGGTCCGCCGCCAAGCAGGCTTCTTCCGGTGCTTTGTTCTCGATGTTCCGACGGTTGCTTTGTTGCGTGGCGAAAGTCGACGGTCGCGGCCGTAAGCATTTGTGA

Coding sequence (CDS)

ATGGCCTCCGTCTGCATATCAGAATGCGTCGACAACGCCTGCATCGTCCCCGCCGCCCGCCCGACGTACGTGAACCTGCAGCGGTGGCCGGAGGAGGAGAACGGCTCTGCAGAGCGCCGCCGGCCACGGCCGAGAGCGCCGGAGGGTATCTCTCGCCGGCAAATGTACCTGAGGAGCTACACCTTCTCCAGAGAGGACACCGCCGTCCCTGAGAGTACAACTCAGAACTGCCTTGGGAAGCTCAGGCCGACGCGGAGGCCGGCGGAGATCCGCGGCGGCCTGAGGAGGAGGAGGAGCCGCTGTTTCGCCGTCGTGAGGTCCGCCGCCAAGCAGGCTTCTTCCGGTGCTTTGTTCTCGATGTTCCGACGGTTGCTTTGTTGCGTGGCGAAAGTCGACGGTCGCGGCCGTAAGCATTTGTGA

Protein sequence

MASVCISECVDNACIVPAARPTYVNLQRWPEEENGSAERRRPRPRAPEGISRRQMYLRSYTFSREDTAVPESTTQNCLGKLRPTRRPAEIRGGLRRRRSRCFAVVRSAAKQASSGALFSMFRRLLCCVAKVDGRGRKHL

Homology

[Close]

BLAST of Spg005788 vs. NCBI nr
Match: XP_008457578.1 (PREDICTED: uncharacterized protein LOC103497245 [Cucumis melo] >KAA0033875.1 uncharacterized protein E6C27_scaffold43059G00600 [Cucumis melo var. makuwa] >TYK01259.1 uncharacterized protein E5676_scaffold49G00460 [Cucumis melo var. makuwa])

HSP 1 Score: 212.6 bits (540), Expect = 2.1e-51
Identity = 112/137 (81.75%), Postives = 118/137 (86.13%), Query Frame = 0


Query: 1   MASVCISECVDNACIVPAARPTYVNLQRWPEEENGSAERRRPRPRAPEGISRRQMYLRSY 60
           MASVCISECVDNACIV AA+PTYVNLQRW EEE  S ERRRPRPRA EGISRRQMYLRSY
Sbjct: 1   MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSY 60

Query: 61  TFSREDTAVPESTTQNCLGKLRPTR-RPAEIRGGLRRRRSRCFAVVRSAAKQASSGALFS 120
           TFSREDT VPE+TTQNC GK+R  R RPA IRG   RRRSRCFA+V++AA QASSGAL  
Sbjct: 61  TFSREDTVVPETTTQNCFGKIRRRRQRPARIRGS--RRRSRCFAMVKAAATQASSGALVL 120

Query: 121 MFRRLLCCVAKVDGRGR 137
           MFRRLLCCVAKVDGR R
Sbjct: 121 MFRRLLCCVAKVDGRSR 135

[Close]

BLAST of Spg005788 vs. NCBI nr
Match: XP_022970388.1 (uncharacterized protein LOC111469389 [Cucurbita maxima])

HSP 1 Score: 207.6 bits (527), Expect = 6.9e-50
Identity = 106/134 (79.10%), Postives = 117/134 (87.31%), Query Frame = 0


Query: 1   MASVCISECVDNACIVPAARPTYVNLQRWPEEENGSAERRRPRPRAPEGISRRQMYLRSY 60
           MASVCISEC+++ACI+PA RPTY +LQRWPEEE+GS E RRPR RA +GISRRQMYLRSY
Sbjct: 1   MASVCISECINDACIIPAGRPTYFSLQRWPEEEDGSVEPRRPRLRAADGISRRQMYLRSY 60

Query: 61  TFSREDTAVPESTTQNCLGKLRPTRRPAEIRGGLRRRRSRCFAVVRSAAKQASSGALFSM 120
           TFSREDT V EST Q CLGKL+  RRPAEIRGG   RRSRCFA+VR+AA +ASSGAL SM
Sbjct: 61  TFSREDTEVHESTAQTCLGKLKRRRRPAEIRGG--GRRSRCFAIVRAAAAKASSGALLSM 120

Query: 121 FRRLLCCVAKVDGR 135
           FRRLLCCVAKVDGR
Sbjct: 121 FRRLLCCVAKVDGR 132

[Close]

BLAST of Spg005788 vs. NCBI nr
Match: XP_011648508.1 (uncharacterized protein LOC105434501 [Cucumis sativus])

HSP 1 Score: 206.5 bits (524), Expect = 1.5e-49
Identity = 108/135 (80.00%), Postives = 115/135 (85.19%), Query Frame = 0


Query: 1   MASVCISECVDNACIVPAARPTYVNLQRWPEEENGSAERRRPRPRAPEGISRRQMYLRSY 60
           MASVCISECVDNACIV AARPTYVNLQRW EEE  S ERRRPRPRA +GISRRQMYLRSY
Sbjct: 1   MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSY 60

Query: 61  TFSREDTAVPESTTQNCLGKLRPTRR-PAEIRGGLRRRRSRCFAVVRSAAKQASSGALFS 120
           TFSRED  VPE+TTQNC GK+R  RR PA IRGG  RRRSRC A+V++AA Q SSGAL  
Sbjct: 61  TFSREDIVVPETTTQNCFGKIRRRRRKPATIRGG--RRRSRCLAMVKAAASQVSSGALLF 120

Query: 121 MFRRLLCCVAKVDGR 135
           +FRRLLCCVAKVDGR
Sbjct: 121 LFRRLLCCVAKVDGR 133

[Close]

BLAST of Spg005788 vs. NCBI nr
Match: KAE8653233.1 (hypothetical protein Csa_019953 [Cucumis sativus])

HSP 1 Score: 206.5 bits (524), Expect = 1.5e-49
Identity = 108/135 (80.00%), Postives = 115/135 (85.19%), Query Frame = 0


Query: 1   MASVCISECVDNACIVPAARPTYVNLQRWPEEENGSAERRRPRPRAPEGISRRQMYLRSY 60
           MASVCISECVDNACIV AARPTYVNLQRW EEE  S ERRRPRPRA +GISRRQMYLRSY
Sbjct: 1   MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSY 60

Query: 61  TFSREDTAVPESTTQNCLGKLRPTRR-PAEIRGGLRRRRSRCFAVVRSAAKQASSGALFS 120
           TFSRED  VPE+TTQNC GK+R  RR PA IRGG  RRRSRC A+V++AA Q SSGAL  
Sbjct: 61  TFSREDIVVPETTTQNCFGKIRRRRRKPATIRGG--RRRSRCLAMVKAAASQVSSGALLF 120

Query: 121 MFRRLLCCVAKVDGR 135
           +FRRLLCCVAKVDGR
Sbjct: 121 LFRRLLCCVAKVDGR 133

[Close]

BLAST of Spg005788 vs. NCBI nr
Match: XP_023519361.1 (uncharacterized protein LOC111782795 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 202.2 bits (513), Expect = 2.9e-48
Identity = 104/134 (77.61%), Postives = 115/134 (85.82%), Query Frame = 0


Query: 1   MASVCISECVDNACIVPAARPTYVNLQRWPEEENGSAERRRPRPRAPEGISRRQMYLRSY 60
           MASVCISEC+++ CI+PA RPTY +LQRWPEEE+GS E RRPR RA +GISRRQMYLRSY
Sbjct: 1   MASVCISECINDTCIIPAGRPTYFSLQRWPEEEDGSVEPRRPRLRAADGISRRQMYLRSY 60

Query: 61  TFSREDTAVPESTTQNCLGKLRPTRRPAEIRGGLRRRRSRCFAVVRSAAKQASSGALFSM 120
           TFSREDT V EST Q CLGKL+  RRPAEIRGG   RRSRCFA+VR+AA +ASSGAL SM
Sbjct: 61  TFSREDTEVHESTAQTCLGKLKRRRRPAEIRGG--GRRSRCFAIVRAAAAKASSGALLSM 120

Query: 121 FRRLLCCVAKVDGR 135
           FRRLL CVAKVDGR
Sbjct: 121 FRRLLSCVAKVDGR 132

[Close]

BLAST of Spg005788 vs. ExPASy TrEMBL
Match: A0A5A7SXG3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00460 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 1.0e-51
Identity = 112/137 (81.75%), Postives = 118/137 (86.13%), Query Frame = 0


Query: 1   MASVCISECVDNACIVPAARPTYVNLQRWPEEENGSAERRRPRPRAPEGISRRQMYLRSY 60
           MASVCISECVDNACIV AA+PTYVNLQRW EEE  S ERRRPRPRA EGISRRQMYLRSY
Sbjct: 1   MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSY 60

Query: 61  TFSREDTAVPESTTQNCLGKLRPTR-RPAEIRGGLRRRRSRCFAVVRSAAKQASSGALFS 120
           TFSREDT VPE+TTQNC GK+R  R RPA IRG   RRRSRCFA+V++AA QASSGAL  
Sbjct: 61  TFSREDTVVPETTTQNCFGKIRRRRQRPARIRGS--RRRSRCFAMVKAAATQASSGALVL 120

Query: 121 MFRRLLCCVAKVDGRGR 137
           MFRRLLCCVAKVDGR R
Sbjct: 121 MFRRLLCCVAKVDGRSR 135

[Close]

BLAST of Spg005788 vs. ExPASy TrEMBL
Match: A0A1S3C748 (uncharacterized protein LOC103497245 OS=Cucumis melo OX=3656 GN=LOC103497245 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 1.0e-51
Identity = 112/137 (81.75%), Postives = 118/137 (86.13%), Query Frame = 0


Query: 1   MASVCISECVDNACIVPAARPTYVNLQRWPEEENGSAERRRPRPRAPEGISRRQMYLRSY 60
           MASVCISECVDNACIV AA+PTYVNLQRW EEE  S ERRRPRPRA EGISRRQMYLRSY
Sbjct: 1   MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSY 60

Query: 61  TFSREDTAVPESTTQNCLGKLRPTR-RPAEIRGGLRRRRSRCFAVVRSAAKQASSGALFS 120
           TFSREDT VPE+TTQNC GK+R  R RPA IRG   RRRSRCFA+V++AA QASSGAL  
Sbjct: 61  TFSREDTVVPETTTQNCFGKIRRRRQRPARIRGS--RRRSRCFAMVKAAATQASSGALVL 120

Query: 121 MFRRLLCCVAKVDGRGR 137
           MFRRLLCCVAKVDGR R
Sbjct: 121 MFRRLLCCVAKVDGRSR 135

[Close]

BLAST of Spg005788 vs. ExPASy TrEMBL
Match: A0A6J1I3Q2 (uncharacterized protein LOC111469389 OS=Cucurbita maxima OX=3661 GN=LOC111469389 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 3.3e-50
Identity = 106/134 (79.10%), Postives = 117/134 (87.31%), Query Frame = 0


Query: 1   MASVCISECVDNACIVPAARPTYVNLQRWPEEENGSAERRRPRPRAPEGISRRQMYLRSY 60
           MASVCISEC+++ACI+PA RPTY +LQRWPEEE+GS E RRPR RA +GISRRQMYLRSY
Sbjct: 1   MASVCISECINDACIIPAGRPTYFSLQRWPEEEDGSVEPRRPRLRAADGISRRQMYLRSY 60

Query: 61  TFSREDTAVPESTTQNCLGKLRPTRRPAEIRGGLRRRRSRCFAVVRSAAKQASSGALFSM 120
           TFSREDT V EST Q CLGKL+  RRPAEIRGG   RRSRCFA+VR+AA +ASSGAL SM
Sbjct: 61  TFSREDTEVHESTAQTCLGKLKRRRRPAEIRGG--GRRSRCFAIVRAAAAKASSGALLSM 120

Query: 121 FRRLLCCVAKVDGR 135
           FRRLLCCVAKVDGR
Sbjct: 121 FRRLLCCVAKVDGR 132

[Close]

BLAST of Spg005788 vs. ExPASy TrEMBL
Match: A0A0A0LXY3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G497810 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 7.4e-50
Identity = 108/135 (80.00%), Postives = 115/135 (85.19%), Query Frame = 0


Query: 1   MASVCISECVDNACIVPAARPTYVNLQRWPEEENGSAERRRPRPRAPEGISRRQMYLRSY 60
           MASVCISECVDNACIV AARPTYVNLQRW EEE  S ERRRPRPRA +GISRRQMYLRSY
Sbjct: 1   MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSY 60

Query: 61  TFSREDTAVPESTTQNCLGKLRPTRR-PAEIRGGLRRRRSRCFAVVRSAAKQASSGALFS 120
           TFSRED  VPE+TTQNC GK+R  RR PA IRGG  RRRSRC A+V++AA Q SSGAL  
Sbjct: 61  TFSREDIVVPETTTQNCFGKIRRRRRKPATIRGG--RRRSRCLAMVKAAASQVSSGALLF 120

Query: 121 MFRRLLCCVAKVDGR 135
           +FRRLLCCVAKVDGR
Sbjct: 121 LFRRLLCCVAKVDGR 133

[Close]

BLAST of Spg005788 vs. ExPASy TrEMBL
Match: A0A6J1HP59 (uncharacterized protein LOC111464745 OS=Cucurbita moschata OX=3662 GN=LOC111464745 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.8e-48
Identity = 104/134 (77.61%), Postives = 115/134 (85.82%), Query Frame = 0


Query: 1   MASVCISECVDNACIVPAARPTYVNLQRWPEEENGSAERRRPRPRAPEGISRRQMYLRSY 60
           MASVCISEC+++ACI+PA RPTY +LQRWPEEE+GS E RRPR RA +GISRRQMYLRSY
Sbjct: 1   MASVCISECINDACIIPAGRPTYFSLQRWPEEEDGSVEPRRPRVRAADGISRRQMYLRSY 60

Query: 61  TFSREDTAVPESTTQNCLGKLRPTRRPAEIRGGLRRRRSRCFAVVRSAAKQASSGALFSM 120
           TF REDT V EST Q CLGKL+  RRPAEIRGG   RRSRCFA+VR+AA +ASSGAL SM
Sbjct: 61  TFCREDTVVHESTAQTCLGKLKWRRRPAEIRGG--GRRSRCFAIVRAAAAKASSGALLSM 120

Query: 121 FRRLLCCVAKVDGR 135
           FRRLL CVAKVDGR
Sbjct: 121 FRRLLSCVAKVDGR 132

[Close]

BLAST of Spg005788 vs. TAIR 10
Match: AT5G02640.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46300.1); Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 77.0 bits (188), Expect = 1.3e-14
Identity = 59/156 (37.82%), Postives = 78/156 (50.00%), Query Frame = 0


Query: 1   MASVCISECVDNA----CIVPAARPTYVNLQRWPEEENGSAERRR-----PRPRAPEGIS 60
           M SVCIS C+++A      V   R +YVNL +WPE +       R     P  R  + IS
Sbjct: 1   MNSVCISSCINDAHDPRVPVRPVRASYVNLYKWPESDAEFVRSVRRGGGLPAARVVDSIS 60

Query: 61  RRQMYLRSYTFSRED-----TAVPESTTQNCLGKLRPT---RRPAEIRGGL-------RR 120
            RQMYLRSYTFSRED       V   T  +CLG+++ T   RR ++   G+        R
Sbjct: 61  CRQMYLRSYTFSREDDESKSEKVSSGTQTSCLGRVKGTASSRRKSKEENGIIIVESTKPR 120

Query: 121 RRSRCFAVVRSAAKQASSGALFSMFRRLLCCVAKVD 133
           RR     V R   ++ +   +  +FRRLL C A VD
Sbjct: 121 RRGEKRRVSRKNKQEQACSVILRIFRRLLSCAATVD 156

[Close]

BLAST of Spg005788 vs. TAIR 10
Match: AT3G46300.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46310.1); Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 47.0 bits (110), Expect = 1.5e-05
Identity = 46/148 (31.08%), Postives = 67/148 (45.27%), Query Frame = 0


Query: 1   MASVCISECV----DNACIVPAARPTYVNLQRWPEEE-----NGSAERRRPRPRAPEGIS 60
           MAS CI +CV    D+ C+ P    TY NL +WP  E     + + +  + R    + IS
Sbjct: 1   MASKCIDDCVNIKRDSICVRPVM--TYANLYKWPMAEAEFVRSINHDGSQHRTTVVDSIS 60

Query: 61  RRQMYLRSYTFSREDT----------AVPESTTQNCLGKLRPTRRPAEIRGGLRRRRSRC 120
            RQMYLRSYTFS E+           AV     Q+C             RGG  R+++  
Sbjct: 61  CRQMYLRSYTFSTEENEEDGDGGDGEAVTRRHNQSC------------FRGGGGRKKAAK 120

Query: 121 FAVVRSAAKQASSGALFSMFRRLLCCVA 130
            A +R+    +    +F + R+ L C +
Sbjct: 121 NA-MRNNKTWSCRTFVFRLVRKCLSCAS 133

[Close]

BLAST of Spg005788 vs. TAIR 10
Match: AT3G46310.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46300.1); Has 35 Blast hits to 35 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.8 bits (107), Expect = 3.2e-05
Identity = 32/74 (43.24%), Postives = 42/74 (56.76%), Query Frame = 0


Query: 1  MASVCISECV---DNACIVPAARPTYVNLQRWPEEE-----NGSAERRRPRPRAPEGISR 60
          MAS CI +CV   +NA  V   R T+  + +WP  E     + S +    R  A E +S 
Sbjct: 1  MASKCIGDCVNIKNNAICVRPGR-THAKIHKWPMAEVEFVQSISQDGSPRRTTAVESLSC 60

Query: 61 RQMYLRSYTFSRED 67
          RQMYLRSYTFSR++
Sbjct: 61 RQMYLRSYTFSRKE 73

The following BLAST results are available for this feature:

BLAST of Spg005788 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457578.1	2.1e-51	81.75	PREDICTED: uncharacterized protein LOC103497245 [Cucumis melo] >KAA0033875.1 unc...	[more]
XP_022970388.1	6.9e-50	79.10	uncharacterized protein LOC111469389 [Cucurbita maxima]	[more]
XP_011648508.1	1.5e-49	80.00	uncharacterized protein LOC105434501 [Cucumis sativus]	[more]
KAE8653233.1	1.5e-49	80.00	hypothetical protein Csa_019953 [Cucumis sativus]	[more]
XP_023519361.1	2.9e-48	77.61	uncharacterized protein LOC111782795 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Spg005788 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg005788 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SXG3	1.0e-51	81.75	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3C748	1.0e-51	81.75	uncharacterized protein LOC103497245 OS=Cucumis melo OX=3656 GN=LOC103497245 PE=...	[more]
A0A6J1I3Q2	3.3e-50	79.10	uncharacterized protein LOC111469389 OS=Cucurbita maxima OX=3661 GN=LOC111469389...	[more]
A0A0A0LXY3	7.4e-50	80.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G497810 PE=4 SV=1	[more]
A0A6J1HP59	1.8e-48	77.61	uncharacterized protein LOC111464745 OS=Cucurbita moschata OX=3662 GN=LOC1114647...	[more]

BLAST of Spg005788 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G02640.1	1.3e-14	37.82	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G46300.1	1.5e-05	31.08	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G46310.1	3.2e-05	43.24	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..50
None	No IPR available	PANTHER	PTHR35304	OS05G0120300 PROTEIN-RELATED	coord: 1..134
None	No IPR available	PANTHER	PTHR35304:SF2	SUBFAMILY NOT NAMED	coord: 1..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg005788.1	Spg005788.1	mRNA