Spg005635 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg005635
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	CACTA en-spm transposon protein
Location	scaffold8: 21783284 .. 21784832 (-)
RNA-Seq Expression	Spg005635
Synteny	Spg005635

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGCAGAGACGAAGTTGAACCCACAATATTAGAGGGACAAATTACTGAGAACAACGATGACAGTTTTATAAATGACGAGAAGATAACGTAGAGGTACCTCTGACGAAGAAGATGATGTAGAACTGGAGGTTGCAACCTCCAATTCAGAACAAGAAGCCTAACATGGGCCACACGTGACTATAATTTTCATGTATGAACTAATTATAATTATGTTTGATTTACTTAACATTGTTTTCTTTCTCTTTTTCAGGTATACGATGTCATCGTCATCACGCCTACAAGACGAGACTGATGGAGAGTACGTCGAGGTGCCGACACCCCCTCGCACGACCTTACCATCTTCCACGGGGGATACGTCAGGTACATCGTGTTCGGTCAATTTTTTTCCAATTTCCTTTTTACTTAAACGATCAAGTGGTTTCCTGTTTGCCCTCAAATGGTACATCCAGGACTAAGAGGAACAAGCATGACTATGGACGAAATCTTCTCTTGGACAACCACGTCACAAGATATTGCAGAATTCCGATTACAATCGATCAAGAGGTGAAAAACCTAGTTGGCAAATAGGTGACACAATTTATCATAGCTATTGGTACGGCCGTCCGGGAGTCTTTCTCTGTTCGATTCAACACATGGGATGACGTAACTGAAAAGGCTAAGAACCTAGTAAAGGCTCTACTACTGGTGAGGAGAACATCTTCTCGTGTTGTTACATTATGTGCTACATCATAGTTCCATACTCAGATATCTATTGCTTTTTTGTAGGACCATTTTGAGATTGATCTGAATTTACCTGCAGTTGTGCGCTTTATAGATCGCACAATGATGAACGCATTTAAGGAGTACAGGGGGGAATTATCTAGACATTACAAATCCTTTGAGACTCTCGAACAAGCACGAGAGAATCCACATGACCGACTGAAAAATTCATTGGAAGATTGACATTATCTGTGCAACAAGTTCGAGGACCCGAATTGGAAAGTAAGAGTATATTCTTGTTGTTAACTTATGCAGAAAGCTTCAGAATCGAATAAAAGGAGTCGATCCATGTTGTCATTCAACCATAAGGCAGGGTCAAAATCATTTATAAACATTCAACACGAAATGGTAAGATATGAATAAACTAATTAAGTTATCTCTACGATTATCAATAAGTTGTTTCTTAAGATTTCACTTGTATTTGAATTGCAGAAAGAGAAAGAGGGCAGAGATATAGATCCCATTGAACTGTTTGAACTGACCCATTCGCGAGATAGAAAGTGGGTGAACCAGGCAGCGGAGGATGCACACATAAGAATGTACACTTTAGTTACTTTGTGGAGTTTTAAAGAACTTAATTGTATATTTTATAAATGTAGGGGAAGATGGAAGATCTACGGGATGCTCCTACTCCAGAAGGGTCTCAACCACTCACTGGACCTGTCATATGTGAAACGGTTTTGGGTAGACGGCCCGGCCACGTTAAAGGCATGGGTTGGGGACCTAAGCCATCTCGATCAAGCACGAGTGGCAGCACATCAATCAATTCGAGACCCACGCAGAGATAA

mRNA sequence

ATGTGCAGAGACGAAGTTGAACCCACAATATTAGAGGGACAAATTACTGAGAACAACGATGACAGTTTTATAAATGACGAGAAGATAACGTATACGATGTCATCGTCATCACGCCTACAAGACGAGACTGATGGAGAGTACGTCGAGGTGCCGACACCCCCTCGCACGACCTTACCATCTTCCACGGGGGATACGTCAGCTATTGGTACGGCCGTCCGGGAGTCTTTCTCTGTTCGATTCAACACATGGGATGACGTAACTGAAAAGGCTAAGAACCTAGTAAAGGCTCTACTACTGAAAGCTTCAGAATCGAATAAAAGGAGTCGATCCATGTTGTCATTCAACCATAAGGCAGGGTCAAAATCATTTATAAACATTCAACACGAAATGGGGAAGATGGAAGATCTACGGGATGCTCCTACTCCAGAAGGGTCTCAACCACTCACTGGACCTGTCATATGTGAAACGGTTTTGGGTAGACGGCCCGGCCACGTTAAAGGCATGGGTTGGGGACCTAAGCCATCTCGATCAAGCACGAGTGGCAGCACATCAATCAATTCGAGACCCACGCAGAGATAA

Coding sequence (CDS)

ATGTGCAGAGACGAAGTTGAACCCACAATATTAGAGGGACAAATTACTGAGAACAACGATGACAGTTTTATAAATGACGAGAAGATAACGTATACGATGTCATCGTCATCACGCCTACAAGACGAGACTGATGGAGAGTACGTCGAGGTGCCGACACCCCCTCGCACGACCTTACCATCTTCCACGGGGGATACGTCAGCTATTGGTACGGCCGTCCGGGAGTCTTTCTCTGTTCGATTCAACACATGGGATGACGTAACTGAAAAGGCTAAGAACCTAGTAAAGGCTCTACTACTGAAAGCTTCAGAATCGAATAAAAGGAGTCGATCCATGTTGTCATTCAACCATAAGGCAGGGTCAAAATCATTTATAAACATTCAACACGAAATGGGGAAGATGGAAGATCTACGGGATGCTCCTACTCCAGAAGGGTCTCAACCACTCACTGGACCTGTCATATGTGAAACGGTTTTGGGTAGACGGCCCGGCCACGTTAAAGGCATGGGTTGGGGACCTAAGCCATCTCGATCAAGCACGAGTGGCAGCACATCAATCAATTCGAGACCCACGCAGAGATAA

Protein sequence

MCRDEVEPTILEGQITENNDDSFINDEKITYTMSSSSRLQDETDGEYVEVPTPPRTTLPSSTGDTSAIGTAVRESFSVRFNTWDDVTEKAKNLVKALLLKASESNKRSRSMLSFNHKAGSKSFINIQHEMGKMEDLRDAPTPEGSQPLTGPVICETVLGRRPGHVKGMGWGPKPSRSSTSGSTSINSRPTQR

Homology

[Close]

BLAST of Spg005635 vs. NCBI nr
Match: TYK00061.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 89.4 bits (220), Expect = 3.8e-14
Identity = 57/174 (32.76%), Postives = 87/174 (50.00%), Query Frame = 0


Query: 51  PTPPRTTLPSSTGDTSAIGTAVRESFSVRFNTWDDVTEKAKNLVKALLLKASESNKRSRS 110
           P   ++  P +     AIG  +R++F +R     DV  +   +VK  L + S +NK +R 
Sbjct: 67  PRAEKSISPHAVRFNQAIGVYMRKTFPIRCLKCVDVGREYIEVVKGDLQEQSRTNKAARQ 126

Query: 111 MLSFNHKAGSKSFINIQHEM---------------------------------GKMEDLR 170
              +NH +GSKSF+  Q+E+                                  +M +L+
Sbjct: 127 KQPYNHSSGSKSFLQRQYELAERKGESVDRVELFRETHVRAGTFVSQATEDAHNQMLELQ 186

Query: 171 DAPTPEGSQPLTGPVICETVLGRRPGHVKGMGWGPKPSRSSTSGSTSINSRPTQ 192
             PTPEGSQPL+   IC+ VLGRRPG+ KG+GWGPKP    T+ ++S ++  +Q
Sbjct: 187 SQPTPEGSQPLSEDEICDQVLGRRPGYSKGLGWGPKPKARRTASASSSSTSYSQ 240

[Close]

BLAST of Spg005635 vs. NCBI nr
Match: TYK31695.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 85.9 bits (211), Expect = 4.2e-13
Identity = 66/193 (34.20%), Postives = 87/193 (45.08%), Query Frame = 0


Query: 49  EVPTPPRTTLPSSTGDTSAIGTAVRESFSVRFNTWDDVTEKAKNLVKA------------ 108
           E P  P T L S      AIG  VR++F VR   W DV  +   +VK             
Sbjct: 70  EKPISPHTVLFS-----QAIGVCVRKTFLVRCLKWADVGREYIEVVKGDLQRLFVLDFND 129

Query: 109 -----------------------------------LLLKASESNKRSRSMLSFNHKAGSK 168
                                              L  + S +NK +R    +NH +GSK
Sbjct: 130 QTMNNDPEEARANPPNALVGRDEDWHFLGDHYISRLFQEQSRTNKAARQKQPYNHSSGSK 189

Query: 169 SFINIQHEM------GKMEDLRDAPTPEGSQPLTGPVICETVLGRRPGHVKGMGWGPKP- 188
            F+  Q+E+       +M +L+  PTPEGSQPL    IC+ VLGRRPG+ KG+GWGPKP 
Sbjct: 190 LFLQRQYEIATEDAHNQMLELQSQPTPEGSQPLFEDEICDRVLGRRPGYSKGLGWGPKPK 249

[Close]

BLAST of Spg005635 vs. NCBI nr
Match: KAA0056252.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 85.1 bits (209), Expect = 7.1e-13
Identity = 52/132 (39.39%), Postives = 77/132 (58.33%), Query Frame = 0


Query: 73  RESFSVRFNTWDDVTEKAKNLVKALLLKASESNKRSRSMLSFNHKAGSKSFINIQHEMG- 132
           R  +   F  + D  E   N   A  L+ S +NK +R    +NH +GSKSF+  Q+E+  
Sbjct: 107 RADYHKHFKKYSDPEEARANPPNA--LEQSRTNKAARQKQPYNHSSGSKSFLQRQYELAE 166

Query: 133 -------KMEDLRDA-PTPEGSQPLTGPVICETVLGRRPGHVKGMGWGPKPS---RSSTS 192
                  ++E  R+  PTP+GSQPL+   IC+ VLGR+PG+ KG+GWGPKP     +S S
Sbjct: 167 RRGQLVDRVELFRETHPTPKGSQPLSEDEICDQVLGRQPGYSKGLGWGPKPKARRTASAS 226

[Close]

BLAST of Spg005635 vs. NCBI nr
Match: KAA0038349.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYJ97045.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 84.3 bits (207), Expect = 1.2e-12
Identity = 55/174 (31.61%), Postives = 85/174 (48.85%), Query Frame = 0


Query: 51  PTPPRTTLPSSTGDTSAIGTAVRESFSVRFNTWDDVTEKAKNLVKALLLKASESNKRSRS 110
           P   +   P +   + AIG  VR++FS+ +  W DV  +   +VK  L + S +NK +R 
Sbjct: 66  PGAEKPISPHAVRFSQAIGVCVRKTFSIHYLKWADVGREYIEVVKGDLQEQSRTNKAARQ 125

Query: 111 MLSFNHKAGSKSFINIQHEM---------------------------------GKMEDLR 170
              +NH +GSKSF+  Q+E+                                  +M +L+
Sbjct: 126 KQPYNHSSGSKSFLQRQYELAERKGESVDRVELFRETHVQAGTFVSQTVEDAHNQMLELQ 185

Query: 171 DAPTPEGSQPLTGPVICETVLGRRPGHVKGMGWGPKPSRSSTSGSTSINSRPTQ 192
             PT EGSQPL+   IC+ VLGRRPG+ KG+ WG K     T+ ++S ++  +Q
Sbjct: 186 SQPTLEGSQPLSEDEICDQVLGRRPGYSKGLSWGHKSKARRTARASSSSTSCSQ 239

[Close]

BLAST of Spg005635 vs. NCBI nr
Match: KAA0051394.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 83.6 bits (205), Expect = 2.1e-12
Identity = 44/94 (46.81%), Postives = 63/94 (67.02%), Query Frame = 0


Query: 102 SESNKRSRSMLSFNHKAGSKSFINIQHEMGKME-------DLRDAPTPEGSQPLTGPVIC 161
           S +NK +R   S+NH +GSKSF+  Q+E+ + +       +L+  PTP+GSQPL    IC
Sbjct: 81  SRTNKAARQKQSYNHSSGSKSFLQRQYELAERQGELNQILELQSQPTPKGSQPLFEDEIC 140

Query: 162 ETVLGRRPGHVKGMGWGPKP-SRSSTSGSTSINS 188
           + VLGRR G+ +G+GWGPKP +R +TS S+S  S
Sbjct: 141 DQVLGRRSGYSRGLGWGPKPKARRTTSASSSSTS 174

[Close]

BLAST of Spg005635 vs. ExPASy TrEMBL
Match: A0A5D3BJR1 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold596G00080 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 1.8e-14
Identity = 57/174 (32.76%), Postives = 87/174 (50.00%), Query Frame = 0


Query: 51  PTPPRTTLPSSTGDTSAIGTAVRESFSVRFNTWDDVTEKAKNLVKALLLKASESNKRSRS 110
           P   ++  P +     AIG  +R++F +R     DV  +   +VK  L + S +NK +R 
Sbjct: 67  PRAEKSISPHAVRFNQAIGVYMRKTFPIRCLKCVDVGREYIEVVKGDLQEQSRTNKAARQ 126

Query: 111 MLSFNHKAGSKSFINIQHEM---------------------------------GKMEDLR 170
              +NH +GSKSF+  Q+E+                                  +M +L+
Sbjct: 127 KQPYNHSSGSKSFLQRQYELAERKGESVDRVELFRETHVRAGTFVSQATEDAHNQMLELQ 186

Query: 171 DAPTPEGSQPLTGPVICETVLGRRPGHVKGMGWGPKPSRSSTSGSTSINSRPTQ 192
             PTPEGSQPL+   IC+ VLGRRPG+ KG+GWGPKP    T+ ++S ++  +Q
Sbjct: 187 SQPTPEGSQPLSEDEICDQVLGRRPGYSKGLGWGPKPKARRTASASSSSTSYSQ 240

[Close]

BLAST of Spg005635 vs. ExPASy TrEMBL
Match: A0A5D3E8U2 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold398G00610 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 2.0e-13
Identity = 66/193 (34.20%), Postives = 87/193 (45.08%), Query Frame = 0


Query: 49  EVPTPPRTTLPSSTGDTSAIGTAVRESFSVRFNTWDDVTEKAKNLVKA------------ 108
           E P  P T L S      AIG  VR++F VR   W DV  +   +VK             
Sbjct: 70  EKPISPHTVLFS-----QAIGVCVRKTFLVRCLKWADVGREYIEVVKGDLQRLFVLDFND 129

Query: 109 -----------------------------------LLLKASESNKRSRSMLSFNHKAGSK 168
                                              L  + S +NK +R    +NH +GSK
Sbjct: 130 QTMNNDPEEARANPPNALVGRDEDWHFLGDHYISRLFQEQSRTNKAARQKQPYNHSSGSK 189

Query: 169 SFINIQHEM------GKMEDLRDAPTPEGSQPLTGPVICETVLGRRPGHVKGMGWGPKP- 188
            F+  Q+E+       +M +L+  PTPEGSQPL    IC+ VLGRRPG+ KG+GWGPKP 
Sbjct: 190 LFLQRQYEIATEDAHNQMLELQSQPTPEGSQPLFEDEICDRVLGRRPGYSKGLGWGPKPK 249

[Close]

BLAST of Spg005635 vs. ExPASy TrEMBL
Match: A0A5A7UK57 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold226G00190 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 3.4e-13
Identity = 52/132 (39.39%), Postives = 77/132 (58.33%), Query Frame = 0


Query: 73  RESFSVRFNTWDDVTEKAKNLVKALLLKASESNKRSRSMLSFNHKAGSKSFINIQHEMG- 132
           R  +   F  + D  E   N   A  L+ S +NK +R    +NH +GSKSF+  Q+E+  
Sbjct: 107 RADYHKHFKKYSDPEEARANPPNA--LEQSRTNKAARQKQPYNHSSGSKSFLQRQYELAE 166

Query: 133 -------KMEDLRDA-PTPEGSQPLTGPVICETVLGRRPGHVKGMGWGPKPS---RSSTS 192
                  ++E  R+  PTP+GSQPL+   IC+ VLGR+PG+ KG+GWGPKP     +S S
Sbjct: 167 RRGQLVDRVELFRETHPTPKGSQPLSEDEICDQVLGRQPGYSKGLGWGPKPKARRTASAS 226

[Close]

BLAST of Spg005635 vs. ExPASy TrEMBL
Match: A0A5A7TAG5 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold506G001110 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 5.9e-13
Identity = 55/174 (31.61%), Postives = 85/174 (48.85%), Query Frame = 0


Query: 51  PTPPRTTLPSSTGDTSAIGTAVRESFSVRFNTWDDVTEKAKNLVKALLLKASESNKRSRS 110
           P   +   P +   + AIG  VR++FS+ +  W DV  +   +VK  L + S +NK +R 
Sbjct: 66  PGAEKPISPHAVRFSQAIGVCVRKTFSIHYLKWADVGREYIEVVKGDLQEQSRTNKAARQ 125

Query: 111 MLSFNHKAGSKSFINIQHEM---------------------------------GKMEDLR 170
              +NH +GSKSF+  Q+E+                                  +M +L+
Sbjct: 126 KQPYNHSSGSKSFLQRQYELAERKGESVDRVELFRETHVQAGTFVSQTVEDAHNQMLELQ 185

Query: 171 DAPTPEGSQPLTGPVICETVLGRRPGHVKGMGWGPKPSRSSTSGSTSINSRPTQ 192
             PT EGSQPL+   IC+ VLGRRPG+ KG+ WG K     T+ ++S ++  +Q
Sbjct: 186 SQPTLEGSQPLSEDEICDQVLGRRPGYSKGLSWGHKSKARRTARASSSSTSCSQ 239

[Close]

BLAST of Spg005635 vs. ExPASy TrEMBL
Match: A0A5A7V2C4 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold340G00820 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.0e-12
Identity = 59/166 (35.54%), Postives = 84/166 (50.60%), Query Frame = 0


Query: 51  PTPPRTTLPSSTGDTSAIGTAVRESFSVRFNTWDDVTEKAKNLVKALLLKASESNKRSRS 110
           P   +   P +   + AIG  VR++F VR   W DV  +   +VK  L + S +NK +R 
Sbjct: 66  PGAEKLISPHAVCFSQAIGVCVRKTFPVRCLKWADVGREYIEVVKGDLQEQSRTNKAARQ 125

Query: 111 MLSFNHKAGSKSFINIQHEMG--------KMEDLRDA----------------PTPEGSQ 170
              +NH +GSKSF+  Q+E+         ++E  R+                 PT EGSQ
Sbjct: 126 KQPYNHSSGSKSFLQRQYELAERKGEPVDRVELFRETHVRAGTFMSQAAEDAHPTLEGSQ 185

Query: 171 PLTGPVICETVLGRRPGHVKGMGWGPKP--------SRSSTSGSTS 185
           PL+   IC+ +LGRRP ++KG+ WGP+P        S SSTS S S
Sbjct: 186 PLSENEICDQMLGRRPDYLKGLSWGPEPKARITVSISSSSTSCSQS 231

The following BLAST results are available for this feature:

BLAST of Spg005635 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK00061.1	3.8e-14	32.76	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
TYK31695.1	4.2e-13	34.20	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
KAA0056252.1	7.1e-13	39.39	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
KAA0038349.1	1.2e-12	31.61	CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYJ97045.1 CACTA en-...	[more]
KAA0051394.1	2.1e-12	46.81	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]

BLAST of Spg005635 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg005635 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BJR1	1.8e-14	32.76	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5D3E8U2	2.0e-13	34.20	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7UK57	3.4e-13	39.39	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5A7TAG5	5.9e-13	31.61	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7V2C4	1.0e-12	35.54	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]

BLAST of Spg005635 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..66
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 173..192
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..192

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg005635.1	Spg005635.1	mRNA