Spg005395 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg005395
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCell division cycle 20.2, cofactor of APC complex
Locationscaffold6: 34701007 .. 34707659 (-)
RNA-Seq ExpressionSpg005395
SyntenySpg005395
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCAAGGGTCGGTGTGATGAGTCTAGAAAGCAAGTATTGGACGCTTGGGGAAGGTCCAATAAGTTTAAATCATCGGTGCACCTCGGGTACAAATGGCCAAGGGGCGACGTACAGTTTGAGGCCTTGGGTACAAATGGTCAAGGTTCGAATGCCGTGCTCCGTAGAGAGCATTGTGGCCCTAGGTACAAATGGTCAGGGACAGTGCGACTCGAAGGGTTAGTCTTGGAAAGCCATGTAGGGCTAAATATGAGCGTTGAGTGAGCTCGTGGAGTTTGAGTGGTTAGTGATTTGCATAGAGTGATGCATGAGTTATGGCTTAGGAGAGTCATTCATTTTATTAGCTTTTGAGCATGTTGTTGTGTTTATCGCTTTAAGAAGCATGTTGTTTGCGCATGAAAAGCACTTTGTTTGCTTGGTTGTTGTGTGATGGCTTCTCAAGTAGGGGCTGCTTACCAGTACCATGGTTGTACTGACCCCCTCCCCTCTCTCTCCCCCCAACTTCTAGATTATGCAGGTTATGAGGACTATCTTGACCATGGTGATGCAGAGGAGACGCATGAGGAAGCACCATAGCTAGATAGCGTTATTTTCCTTTATATTTTCATCTTGAATAGGGTAGTGTTGCTTTCATTGGTTGGACAACTGTTTGTCCTATTTGTTTTAGTTCTAAATTTATTCTTGTTGCAACTCTAGACTTTAGTTGTGTTGGTGTTAATGAACTCTATCTATTCACTTAGTTAATAATAATTAAGTTTGTTTTGAATAGACTAAAGTTGTAAGCTTTGTTAAGGTTGTGTTCTGGTTAGTTAGTTGTTGATATGAGACCTGTGTTGTAGTTTGGTGGAATAATTAAAAATGTTATAGGAGTGTTATTCTTGTTTTAGTAGGTGTTTGAAAATTTTGGGTTAGTCCTATGTATGTCGTTATGTTGCCGAAATTTTCGGAACACTGTTCTATAAGAAGTTAAGAAGTTAGTAATATCGCTAGGTTAGTTGTTAATAAAAACCTGGGGCGTTACAATTTGTATCAGAGCAAAGTTGTTCCTGTAGACTGACCTAGGAAATCTAGGTTGTTTGGGGAGTCTAGGATAGTGGTCTTCCTCATTCTCCTCTCCATCACCAGGTATGTTGGAATAAAGTTGTTATATTATCTGGTTGCGTAGTATTTGTTATTTTGAATATGCAATGTATGATTATTGTTTGATGTACTTGAGTGCTTAGCTGGCTTGTATTCTTATTATTATTTTGGTTGTCTTGTCTGAGCATGTTGTTTTCCTGTGTTCTTTATTATATGGTAGCTAGGTTTGGGATGCTCCCTTTAGGTGGATAGATAGATTGCTTTGATTGTGTGATTCTTGTTTGGTAGTAGGAGTAGGATGCTCCCATAGTTAGCTAGATAGCTCTTGTTTTTCTTGTGATTGTCTTGTGTGATGTTGTTTGTTAGTAGACATAGGATGTTGTCATAGTTTTCTAAATTGCTTGCGTATTCTTGTTGTGCATGTTGAGTGTTATAGCTTTTTAAGCATGTTGTTTGCGTGTGAGTAGCATGTTGATTTACCTTGGTTGTTGTTTGTGACTTAGCAAGTGTGAGCTGCTTACCAGTATCACGGTTGTACTGATACCCCCACTCTTTTCTTCCCCCAACATTTTAGAGGTTGCAAGTTTGGACGATGAGCTAGACCATGGTGGTGAGGAAGAGGAGAACTACGAGGAGGAATCCTAGAGTGGTTGAGTTTTCCTTTGTTTATGATTGAATAGGCTAGAGTTGGTTTGGTTAAATTGTTGTTTCTGTTATGATGAGAGATTAACTTGAGATGTGTAACGCCCCGCGTTCTGAAATCGAGCCATTTTGGAGTTATTTGGGCGTTGTATTCTAATTTGGAAAATTAGAATTTAAGTTTAGCCTTGGGTCGTTAAATAAATTTCTATAACTTGGGGAAAAGAGATTTTTAATTAAGTCTTTAATTTTCCTAAAGTTTGGAGATTTGATAATCGATATTTATTTTGAATATCATAAGACCCTAACTCGATTTAAATCTCAAAATCTTTAGGAGCTAAGATTGGGATTTAAAATCCAATCGGGGTTTTAAATTGAAATCCTAACTCCTTATTAAATTGGGATTTTATCCCTAGGGTTTATTTAAAAGAATGTGGGGCAAAAAAAAAAAAGAAGTTAGCAAAAAGAGCCCTAATTTCCCTTTTCTCTCTCCATCTCCTTCCTTCTTGCCGTGAACCAGCCCCCTCCCCTTTATAATTTTCTTCCAGCCGCCGCACCCTCCGTCCAGTCGCCGGAATCCGGCCGTCGTCGCCCCAAACCACGAACGCACACCGCCGCCCAGCCTTCCCTTGCCGCTGTCCAGCCGCGCCGTCCCTGCTCATCTCTCTCTCGCGCGTCTCTCTCTCTCTCTCGGTTTCCCCCGTCGTGAAGCTTCAGCGCCGCCGTTGATTAGAGCCTCGCGCCGCCGCCGTTGGTCGCAGCACTGAGCCCCGTCGCAGCAACGCCGTCCCTTCGCCGCCTCTCTCCCTCTCTGTTCGTGTGATTTCGACTAAGGAAGCTCGTGGGTAAGTCTCTATCCTTCTCATTCCTAGTTGTTGAAGGCCTGATCTAACCCCTTGCGCTCATTCCGACTAGTTTCGTGTCCGTCCAGCAGCGGAGTTTCCGTTTTCTCGCATTTTTGTCTCTGTCCAGCATCGTTTTCGAGCGTTTTCGGCGTCGTTTGGTGATTTCGGTAAGCTTTAACTCTTACCCATTCTTGGTTAGAGTTTACATTATATTACCCAATGGATTAGGTGCTGGAAATTATAAGAAAACGTTGAAATTCTATTCTGCAGAGTCGTAAAAGTGTTCGATTGAGTTCGAATCACTTAAAGCTTGAATACCCATTGCCCAAGGATCGTTCTAGTGCGTTGTTCGAGGTTATTGTAACCCGTCTTGCGTGGAAACGGGTTCGTTGGGCAAGGTTCAATGCTGTTTTTAGTTTTATAGGCTATGTGTTTGATACCCATTAGAGATTAAAGCCTTAAAATTATGTTTTAATCGATACCCATTAGCTGTTTACGCTTTTAAAGGTTTGCCCAACTCCTATAGGTCCTTAGAATGTGAAGTTAATGAGTTTCCACATGTTACTCATGGCTTAAAAGCATGTTTCTATTAATGCCCATTATGTGTCGTCGCCTAATTAGTCTTACCCAACCCTTGTAGGTCCTTAAATCATGATTTAGGAGGTTTATGTTTGCTGTTCGTGGTTTTAAAAGCATGCTAAAATTATCTTATATCAATTGCCTAAGCCGAGTAGCGTTGCCCAACCTCTAGGAGTCCTTAGAATCCAAGTTCTTGTCTTTTACTTTCTGTCCAACGGCTGAAAAGCCTTGGCTATAGCCATTCGGTGAGTACCCATTGCCCGTTGTGCCTCAGACATGGTTGCCCATGGTCTAAAGGCTTTGGGTTTTTAATTTGGGGAATTTTGAGTGGTTATACGATAAGGAAATAGACTTTCCTCAGTTGATTTAGACCCTTCTAGTATGTTTAAAGTATTTAGTAAGTTAGTTCTAATTTTAGAAGTTATTCTTGTTGTTTAGGAGCTTATCTAAATCTCTTGAGCAGTTTAAGGAGTTCTTAGGAGTGCTCGTAAGCTTTTCGGTAAGTAGTTTCTATCCGTTGAGTCTGTTTGATTGCATGAGCATGCTTGCTGTTTATCGCTTTTCTAGTATGCCTCGTTGTCTTGTTGTTTGTTATGGAATTTGATTTATGTGTTAGAAGTGTTGTTTGATCGATATTAAAGCATGATGAACTGTTGGTTGTGTTAAGCAAGTTGTCTTATTGCTTTTGAGCTATACTGCACGATAGTCAAGTTGCATGGTCTTGTGTGCTCATTGAGAGGTGAGTCGGGTTGTGTGAGCGGAGCGTGACGCGAAAATCACGTGTTAAGATTGCGCTACATGACGCGAAAATCATGTTATTGGTGCGGAGCGTGACGCGTAAATCACGTGCGAGTGTGCGCTGCGCATGGCGCGTAACTCATGTGCTGGGTGTGAGTGCGTTACATGACGCGGAAATCATGTTTTGGTGCGGAGCGTGACGCGGAAATCACGTGTTAAGTTGCGTTGCATGGCGCGGAATTCATGTGCATTGGTGCGTGGCATGACGCGTAAATCATGTGCTAAGAAAGCGAGCATGGCGCGGAATCCATGTGGGTTGCATAGCATGTCGTGTGTTTACATGAGCCATTCTTTTGAGTTAACAAGAGTTTTGTTGATGAGTTATCGTTTTGTGGAGCATGATTATGTGTTTATTGCTTAAGAGTATGTTGGATGCGTGTGCCTAGCATGTTGATTTTGTTGTTTGATGCTTGATGGCTCACCGGGTGTGAGCTGCTTACCAGTACCGTGGTTGTACTGACCCCTCCCCTTTCTTCCCCCCAACATTTTAGATGATGCAGGTGTTGGCGGATATTATGAGCCCGGTGGTGCTGACGAGGAGACACACGAGGAGTGACTCCACTGGCCTAGGCATTTTTGTTATCTAGAAATTAGTTTTTTCTATTTTGGTTATTAAAGTAATTTTATTCCTCTGGTTGTAAGGGATAGTGTTACGTTTCTTCTTTCAGAGGCTCGTTTAGTTGTTTTGTTTTGAGAGGATAGGTTTAGCTTTTGAGAAGTTGTACTTGAAGTTTGATGCCTTATTTTGATAAAGCTACGTCGTGCTAATAATCGAGTTGCATGCTTTTACTTAGTAAGTTTATATTTCTGAAGTTAGTTGTGAATGCGAGGTCTGACTCGCTTTATTGTGGAGTATGGGTTTCTGTTGTGTGATAGTGGAGTTGTGGAGTGTAGTTGTGGGTTGAATGTTATTTAGAAGTGTGTTTTATGTTTAGCAGGTTAAAAGAAAAATTTTGGGTTAGTCCTATGTATGTCGTTATGCTGCCGAAATTTTCGGTGCAATCGATTAGTTTGGGTTGAGAGTTAGTAATGTCGCTAGGATTAGTTTAAAAAAATCCTGGGGCGTTACAAGATGTTTATGTTTTTGATAACTTGTGGTCTAGCCTTGTGGTTAGCTTTGATGAAAGAATAATTTGAATTAGCTAGTATGTTACTAATTGAGTTGTTAGTCTTAATAAAGATTTGGCTTATGTTCTGTTGTCTGGTTTTAGTTTTAATGCATGTTGCTACGAGACCCGACTCGTATAGTGAAGTTAGGTTGTGAAATCTGCATTGTAGTTTGGTGGAGTTTGGTTTTGGAACCGTTTAGAAGTGTTTGTTTTGTTTATCAGGTTAAAAGAAATTTTGGGTTAGCCAGTTTTATGTCGTTATGTTACCGAAATTTTTGGGGCACTCGGTTGTAAAAGGCTTAGAATTGAAGTAGCGTCGCTAGGCTAGTGGTTTGTAGAACCTGGGGCGTTACACTTGGTTCAATGGGTTCAAAGATAATTCCATCCAAAACTTCCATGTATTGAGCAAATCATATCTGGAATTTTTCCATTTCTAAGTAGCTAGCTTGGGAGACTTTCGACCACATTGTTGTAATGTAAAATAAGGGCCCAAGGTGGAGTCCCTTGAGATCATATCAAGCAATTCAATGTACACAAACTTAAAGCATTGAAAAATTAAAACAATTCAAATTCGGTCACGTACTTATTAGTAGTTGGTAAGTAGAAGTAGAATTCTTTAGTCACTTTGAGGTTCATTCCTTTCTCGAAAATCTAAAAAACACTTTTAGAGGTAATAAAAGAAAACAACAAAAGGGAGTGTGACATCCACCTTTGGAATCTTAAGGTTGCCTTGCCTTAGATACCATCCCAAGAAACAAAAAGGAAAAGGAAAAGAAAAGAAAAACATTGTAAATGAAGTGATGAGTGGATCGGATCGAATCACTGAACCAAAGCAAGGACCTCCTTCATTTGGCTCTCTTTTACTCCATGCTTAAGCTGGCAAAGTGAATAAAGGAAAGAGGAAAGAGGAAAACCTAATTCGTTCATTTGTGCTCCGTGCCACTTCTTCTTCTTCTTCATGTCGTCTCCTCCTCTGTTTTAGCAGTTCAGTGTCGTTGCTGCCTCTCTCCCATTCACTGTTGGCGCTGCTGTCGTCTTTCTTACGCTTGTGCCACCACCACCTTTGTCTTTCTTTCTTTCGTGCCGTCGAAGCCTCCCTACTAGTGGTTTTGCACTGATTTTCTACTCCCCTCTTGTTCCTGGTATACTCCCAATCTCCATCTATGTCTTTCTTCTCACTTGAGAAAAACAAATTAGAACTCGTCTAATGAAAGAATGGAGGACATTGTCATTTCCTCCACTTGCGCAAGCTTGAGGAGTGGCATCTGTCCCAGAAGATGCCATTGATCTGTCCCATGACAATGTCCTCCACGTCTGGGACAAATCAATGGCATCTTCAAACTCAGTGACCCAGTGGCTTCACAGGCTTGAGGAGCATACTTCTGCAGTCAAGGCTCTTGCATGGTGTCCATTCCAAGGTAACTTGCTCGCAACAGGTGGAGGTGCTGGAGATCGCACCATAAAGTTTTGGAACACCCACACTGGCGCATGTTTGAATTCTGTCGATACTGGTTCTCAAGTCTGTGCTCTATTGTGGAACAAGAATGAGAAAGAGCTAAGCAGGAGAACTAAGCAGCTCTCTCTCATTCTTGTTCCACAATAG

mRNA sequence

ATGGTCAAGGGTCGGTGTGATGAGTCTAGAAAGCAAGTATTGGACGCTTGGGGAAGGTCCAATAAGTTTAAATCATCGGTGCACCTCGGGTACAAATGGCCAAGGGGCGACGTACAGTTTGAGGCCTTGGGTACAAATGGTCAAGGTTCGAATGCCGTGCTCCGTAGAGAGCATTGTGGCCCTAGGTACAAATGGTCAGGGACAGTGCGACTCGAAGGCAAGTGTGAGCTGCTTACCAGTATCACGGTTGTACTGATACCCCCACTCTTTTCTTCCCCCAACATTTTAGAGGTTGCAAGTTTGGACGATGAGCTAGACCATGGTGAGCCTCGCGCCGCCGCCGTTGGTCGCAGCACTGAGCCCCGTCGCAGCAACGCCGTCCCTTCGCCGCCTCTCTCCCTCTCTGTTCGTGTGATTTCGACTAAGGAAGCTCGTGGTTTCGTGTCCGTCCAGCAGCGGAGTTTCCGTTTTCTCGCATTTTTGTCTCTGTCCAGCATCGTTTTCGAGCGTTTTCGGCGTCGTTTGGTGATTTCGAGTCGTAAAAGTGTTCGATTGAGTTCGAATCACTTAAAGCTTGAATACCCATTGCCCAAGGATCGTTCTAGTGCGTTGTTCGAGGTTATTGTAACCCGTCTTGCGTGGAAACGGGTTCGTTGGGCAAGGAGCTTATCTAAATCTCTTGAGCAGTTTAAGGAGTTCTTAGGAGTGCTCGTAAGCTTTTCGTTGCGTTGCATGGCGCGGAATTCATGTGCATTGGTGCGTGGCATGACGCGTAAATCATGTGCTAAGAAAGCGAGCATGGCGCGGAATCCATGTGGGTTGCATAGCATGTCGTGTGTTTACATGAGCCATTCTTTTGAGTTAACAAGAGTTTTGTTGATGAGTTATCGTTTTGTGGAGCATGATTATGTGTTGGCGGATATTATGAGCCCGGTGGTGCTGACGAGGAGACACACGAGGAGTGACTCCACTGGCCTAGGCATTTTTTTAGTTGTGAATGCGAGTGTCGTTGCTGCCTCTCTCCCATTCACTGTTGGCGCTGCTGTCGTCTTTCTTACGCTTGTGCCACCACCACCTTTGTCTTTCTTTCTTTCGTGCCGTCGAAGCCTCCCTACTAGTGGTTTTGCACTGATTTTCTACTCCCCTCTTGTTCCTGGAGTGGCATCTGTCCCAGAAGATGCCATTGATCTGTCCCATGACAATGTCCTCCACGTCTGGGACAAATCAATGGCATCTTCAAACTCAGTGACCCAGTGGCTTCACAGGCTTGAGGAGCATACTTCTGCAGTCAAGGCTCTTGCATGGTGTCCATTCCAAGGTAACTTGCTCGCAACAGGTGGAGGTGCTGGAGATCGCACCATAAAGTTTTGGAACACCCACACTGGCGCATGTTTGAATTCTGTCGATACTGGTTCTCAAGTCTGTGCTCTATTGTGGAACAAGAATGAGAAAGAGCTAAGCAGGAGAACTAAGCAGCTCTCTCTCATTCTTGTTCCACAATAG

Coding sequence (CDS)

ATGGTCAAGGGTCGGTGTGATGAGTCTAGAAAGCAAGTATTGGACGCTTGGGGAAGGTCCAATAAGTTTAAATCATCGGTGCACCTCGGGTACAAATGGCCAAGGGGCGACGTACAGTTTGAGGCCTTGGGTACAAATGGTCAAGGTTCGAATGCCGTGCTCCGTAGAGAGCATTGTGGCCCTAGGTACAAATGGTCAGGGACAGTGCGACTCGAAGGCAAGTGTGAGCTGCTTACCAGTATCACGGTTGTACTGATACCCCCACTCTTTTCTTCCCCCAACATTTTAGAGGTTGCAAGTTTGGACGATGAGCTAGACCATGGTGAGCCTCGCGCCGCCGCCGTTGGTCGCAGCACTGAGCCCCGTCGCAGCAACGCCGTCCCTTCGCCGCCTCTCTCCCTCTCTGTTCGTGTGATTTCGACTAAGGAAGCTCGTGGTTTCGTGTCCGTCCAGCAGCGGAGTTTCCGTTTTCTCGCATTTTTGTCTCTGTCCAGCATCGTTTTCGAGCGTTTTCGGCGTCGTTTGGTGATTTCGAGTCGTAAAAGTGTTCGATTGAGTTCGAATCACTTAAAGCTTGAATACCCATTGCCCAAGGATCGTTCTAGTGCGTTGTTCGAGGTTATTGTAACCCGTCTTGCGTGGAAACGGGTTCGTTGGGCAAGGAGCTTATCTAAATCTCTTGAGCAGTTTAAGGAGTTCTTAGGAGTGCTCGTAAGCTTTTCGTTGCGTTGCATGGCGCGGAATTCATGTGCATTGGTGCGTGGCATGACGCGTAAATCATGTGCTAAGAAAGCGAGCATGGCGCGGAATCCATGTGGGTTGCATAGCATGTCGTGTGTTTACATGAGCCATTCTTTTGAGTTAACAAGAGTTTTGTTGATGAGTTATCGTTTTGTGGAGCATGATTATGTGTTGGCGGATATTATGAGCCCGGTGGTGCTGACGAGGAGACACACGAGGAGTGACTCCACTGGCCTAGGCATTTTTTTAGTTGTGAATGCGAGTGTCGTTGCTGCCTCTCTCCCATTCACTGTTGGCGCTGCTGTCGTCTTTCTTACGCTTGTGCCACCACCACCTTTGTCTTTCTTTCTTTCGTGCCGTCGAAGCCTCCCTACTAGTGGTTTTGCACTGATTTTCTACTCCCCTCTTGTTCCTGGAGTGGCATCTGTCCCAGAAGATGCCATTGATCTGTCCCATGACAATGTCCTCCACGTCTGGGACAAATCAATGGCATCTTCAAACTCAGTGACCCAGTGGCTTCACAGGCTTGAGGAGCATACTTCTGCAGTCAAGGCTCTTGCATGGTGTCCATTCCAAGGTAACTTGCTCGCAACAGGTGGAGGTGCTGGAGATCGCACCATAAAGTTTTGGAACACCCACACTGGCGCATGTTTGAATTCTGTCGATACTGGTTCTCAAGTCTGTGCTCTATTGTGGAACAAGAATGAGAAAGAGCTAAGCAGGAGAACTAAGCAGCTCTCTCTCATTCTTGTTCCACAATAG

Protein sequence

MVKGRCDESRKQVLDAWGRSNKFKSSVHLGYKWPRGDVQFEALGTNGQGSNAVLRREHCGPRYKWSGTVRLEGKCELLTSITVVLIPPLFSSPNILEVASLDDELDHGEPRAAAVGRSTEPRRSNAVPSPPLSLSVRVISTKEARGFVSVQQRSFRFLAFLSLSSIVFERFRRRLVISSRKSVRLSSNHLKLEYPLPKDRSSALFEVIVTRLAWKRVRWARSLSKSLEQFKEFLGVLVSFSLRCMARNSCALVRGMTRKSCAKKASMARNPCGLHSMSCVYMSHSFELTRVLLMSYRFVEHDYVLADIMSPVVLTRRHTRSDSTGLGIFLVVNASVVAASLPFTVGAAVVFLTLVPPPPLSFFLSCRRSLPTSGFALIFYSPLVPGVASVPEDAIDLSHDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWNTHTGACLNSVDTGSQVCALLWNKNEKELSRRTKQLSLILVPQ
Homology
BLAST of Spg005395 vs. NCBI nr
Match: XP_004149610.1 (cell division cycle 20.2, cofactor of APC complex [Cucumis sativus] >KGN58619.1 hypothetical protein Csa_000850 [Cucumis sativus])

HSP 1 Score: 184.9 bits (468), Expect = 1.7e-42
Identity = 82/88 (93.18%), Postives = 87/88 (98.86%), Query Frame = 0

Query: 399 HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWN 458
           +DNVLH+WD+SMASSNS TQWLHRLE+HTSAVKALAWCPFQGNLLATGGGAGDRTIKFWN
Sbjct: 282 NDNVLHIWDRSMASSNSATQWLHRLEDHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWN 341

Query: 459 THTGACLNSVDTGSQVCALLWNKNEKEL 487
           THTGACLNSVDTGSQVCALLWNKNE+EL
Sbjct: 342 THTGACLNSVDTGSQVCALLWNKNEREL 369

BLAST of Spg005395 vs. NCBI nr
Match: XP_008461771.1 (PREDICTED: cell division cycle 20.2, cofactor of APC complex-like [Cucumis melo] >KAA0048303.1 cell division cycle 20.2, cofactor of APC complex-like [Cucumis melo var. makuwa] >TYK10648.1 cell division cycle 20.2, cofactor of APC complex-like [Cucumis melo var. makuwa])

HSP 1 Score: 184.1 bits (466), Expect = 2.9e-42
Identity = 82/88 (93.18%), Postives = 86/88 (97.73%), Query Frame = 0

Query: 399 HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWN 458
           +DNVLH+WD+SMASSNS TQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDR IKFWN
Sbjct: 282 NDNVLHIWDRSMASSNSATQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRNIKFWN 341

Query: 459 THTGACLNSVDTGSQVCALLWNKNEKEL 487
           THTGACLNSVDTGSQVCALLWNKNE+EL
Sbjct: 342 THTGACLNSVDTGSQVCALLWNKNEREL 369

BLAST of Spg005395 vs. NCBI nr
Match: TXG47997.1 (hypothetical protein EZV62_027291 [Acer yangbiense])

HSP 1 Score: 181.8 bits (460), Expect = 1.5e-41
Identity = 80/88 (90.91%), Postives = 85/88 (96.59%), Query Frame = 0

Query: 399 HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWN 458
           +DN+LH+WD+SMASSNS TQWLHRLEEHTSAVKALAWCPFQGNLLATGGG GDR IKFWN
Sbjct: 279 NDNLLHIWDRSMASSNSTTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGGGDRCIKFWN 338

Query: 459 THTGACLNSVDTGSQVCALLWNKNEKEL 487
           THTGACLNS+DTGSQVCALLWNKNEKEL
Sbjct: 339 THTGACLNSIDTGSQVCALLWNKNEKEL 366

BLAST of Spg005395 vs. NCBI nr
Match: XP_030533075.1 (cell division cycle 20.2, cofactor of APC complex-like [Rhodamnia argentea] >XP_030533077.1 cell division cycle 20.2, cofactor of APC complex-like [Rhodamnia argentea] >XP_030533078.1 cell division cycle 20.2, cofactor of APC complex-like [Rhodamnia argentea] >XP_030533079.1 cell division cycle 20.2, cofactor of APC complex-like [Rhodamnia argentea])

HSP 1 Score: 181.0 bits (458), Expect = 2.5e-41
Identity = 80/88 (90.91%), Postives = 86/88 (97.73%), Query Frame = 0

Query: 399 HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWN 458
           +DNVLH+WDKSMASSNS TQWLHRLEEHT+AVKALAWCPFQGNLLA+GGG GDRTIKFWN
Sbjct: 280 NDNVLHIWDKSMASSNSPTQWLHRLEEHTAAVKALAWCPFQGNLLASGGGGGDRTIKFWN 339

Query: 459 THTGACLNSVDTGSQVCALLWNKNEKEL 487
           THTGACLNS+DTGSQVCALLWNKNE+EL
Sbjct: 340 THTGACLNSLDTGSQVCALLWNKNEREL 367

BLAST of Spg005395 vs. NCBI nr
Match: KAG6605663.1 (Cell division cycle 20.1, cofactor of APC complex, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 180.3 bits (456), Expect = 4.2e-41
Identity = 80/88 (90.91%), Postives = 85/88 (96.59%), Query Frame = 0

Query: 399 HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWN 458
           +DNVLH+WD+SMASSNS TQWLHRLE+HTSAVKALAWCPFQ NLLATGGGA DRTIKFWN
Sbjct: 273 NDNVLHIWDRSMASSNSATQWLHRLEDHTSAVKALAWCPFQSNLLATGGGASDRTIKFWN 332

Query: 459 THTGACLNSVDTGSQVCALLWNKNEKEL 487
           THTGACLNSVDTGSQVCALLWNKNE+EL
Sbjct: 333 THTGACLNSVDTGSQVCALLWNKNEREL 360

BLAST of Spg005395 vs. ExPASy Swiss-Prot
Match: Q9SZA4 (Cell division cycle 20.1, cofactor of APC complex OS=Arabidopsis thaliana OX=3702 GN=CDC20-1 PE=1 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 8.0e-43
Identity = 77/88 (87.50%), Postives = 85/88 (96.59%), Query Frame = 0

Query: 399 HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWN 458
           +DNV+H+WD+S+ASSNS TQWLHRLEEHTSAVKALAWCPFQ NLLATGGG GDRTIKFWN
Sbjct: 286 NDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGDRTIKFWN 345

Query: 459 THTGACLNSVDTGSQVCALLWNKNEKEL 487
           THTGACLNSVDTGSQVC+LLW+KNE+EL
Sbjct: 346 THTGACLNSVDTGSQVCSLLWSKNEREL 373

BLAST of Spg005395 vs. ExPASy Swiss-Prot
Match: Q9S7I8 (Cell division cycle 20.2, cofactor of APC complex OS=Arabidopsis thaliana OX=3702 GN=CDC20-2 PE=1 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 8.0e-43
Identity = 77/88 (87.50%), Postives = 85/88 (96.59%), Query Frame = 0

Query: 399 HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWN 458
           +DNV+H+WD+S+ASSNS TQWLHRLEEHTSAVKALAWCPFQ NLLATGGG GDRTIKFWN
Sbjct: 276 NDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGDRTIKFWN 335

Query: 459 THTGACLNSVDTGSQVCALLWNKNEKEL 487
           THTGACLNSVDTGSQVC+LLW+KNE+EL
Sbjct: 336 THTGACLNSVDTGSQVCSLLWSKNEREL 363

BLAST of Spg005395 vs. ExPASy Swiss-Prot
Match: F4K5R6 (Cell division cycle 20.6, cofactor of APC complex OS=Arabidopsis thaliana OX=3702 GN=CDC20-6 PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 8.6e-37
Identity = 66/88 (75.00%), Postives = 79/88 (89.77%), Query Frame = 0

Query: 399 HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWN 458
           +DNV+H+WD+S+ASSN   QWLHR EEHT+AV+ALAWCPFQ +LLATGGG GD  I FWN
Sbjct: 256 NDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDGKINFWN 315

Query: 459 THTGACLNSVDTGSQVCALLWNKNEKEL 487
           THTGACLNSV+TGSQVC+LLW+K+E+EL
Sbjct: 316 THTGACLNSVETGSQVCSLLWSKSEREL 343

BLAST of Spg005395 vs. ExPASy Swiss-Prot
Match: Q4PSE4 (Cell division cycle 20.4, cofactor of APC complex OS=Arabidopsis thaliana OX=3702 GN=CDC20-4 PE=2 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 2.5e-36
Identity = 65/88 (73.86%), Postives = 79/88 (89.77%), Query Frame = 0

Query: 399 HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWN 458
           +DNV+H+WD+S+ASS    QWLHR EEHT+AV+ALAWCPFQ +LLATGGG GD  IKFWN
Sbjct: 272 NDNVVHIWDRSLASSKQTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDGKIKFWN 331

Query: 459 THTGACLNSVDTGSQVCALLWNKNEKEL 487
           THTGACLNSV+TGSQVC+LLW+++E+EL
Sbjct: 332 THTGACLNSVETGSQVCSLLWSQSEREL 359

BLAST of Spg005395 vs. ExPASy Swiss-Prot
Match: Q3E906 (Cell division cycle 20.5, cofactor of APC complex OS=Arabidopsis thaliana OX=3702 GN=CDC20-5 PE=1 SV=3)

HSP 1 Score: 153.3 bits (386), Expect = 7.3e-36
Identity = 67/89 (75.28%), Postives = 80/89 (89.89%), Query Frame = 0

Query: 399 HDNVLHVWD-KSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFW 458
           +DNV+H+WD +S+ASSN   QWLHR EEHT+AV+ALAWCPFQ +LLATGGG GD  IKFW
Sbjct: 277 NDNVVHIWDHRSVASSNPTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDGKIKFW 336

Query: 459 NTHTGACLNSVDTGSQVCALLWNKNEKEL 487
           NTHTGACLNSV+TGSQVC+LLW+K+E+EL
Sbjct: 337 NTHTGACLNSVETGSQVCSLLWSKSEREL 365

BLAST of Spg005395 vs. ExPASy TrEMBL
Match: A0A0A0LCG1 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G702570 PE=3 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 8.3e-43
Identity = 82/88 (93.18%), Postives = 87/88 (98.86%), Query Frame = 0

Query: 399 HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWN 458
           +DNVLH+WD+SMASSNS TQWLHRLE+HTSAVKALAWCPFQGNLLATGGGAGDRTIKFWN
Sbjct: 282 NDNVLHIWDRSMASSNSATQWLHRLEDHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWN 341

Query: 459 THTGACLNSVDTGSQVCALLWNKNEKEL 487
           THTGACLNSVDTGSQVCALLWNKNE+EL
Sbjct: 342 THTGACLNSVDTGSQVCALLWNKNEREL 369

BLAST of Spg005395 vs. ExPASy TrEMBL
Match: A0A5D3CHD8 (Cell division cycle 20.2, cofactor of APC complex-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25G00100 PE=3 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.4e-42
Identity = 82/88 (93.18%), Postives = 86/88 (97.73%), Query Frame = 0

Query: 399 HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWN 458
           +DNVLH+WD+SMASSNS TQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDR IKFWN
Sbjct: 282 NDNVLHIWDRSMASSNSATQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRNIKFWN 341

Query: 459 THTGACLNSVDTGSQVCALLWNKNEKEL 487
           THTGACLNSVDTGSQVCALLWNKNE+EL
Sbjct: 342 THTGACLNSVDTGSQVCALLWNKNEREL 369

BLAST of Spg005395 vs. ExPASy TrEMBL
Match: A0A1S3CFY1 (cell division cycle 20.2, cofactor of APC complex-like OS=Cucumis melo OX=3656 GN=LOC103500295 PE=3 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.4e-42
Identity = 82/88 (93.18%), Postives = 86/88 (97.73%), Query Frame = 0

Query: 399 HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWN 458
           +DNVLH+WD+SMASSNS TQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDR IKFWN
Sbjct: 282 NDNVLHIWDRSMASSNSATQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRNIKFWN 341

Query: 459 THTGACLNSVDTGSQVCALLWNKNEKEL 487
           THTGACLNSVDTGSQVCALLWNKNE+EL
Sbjct: 342 THTGACLNSVDTGSQVCALLWNKNEREL 369

BLAST of Spg005395 vs. ExPASy TrEMBL
Match: A0A5C7GU38 (WD_REPEATS_REGION domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_027291 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 7.1e-42
Identity = 80/88 (90.91%), Postives = 85/88 (96.59%), Query Frame = 0

Query: 399 HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWN 458
           +DN+LH+WD+SMASSNS TQWLHRLEEHTSAVKALAWCPFQGNLLATGGG GDR IKFWN
Sbjct: 279 NDNLLHIWDRSMASSNSTTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGGGDRCIKFWN 338

Query: 459 THTGACLNSVDTGSQVCALLWNKNEKEL 487
           THTGACLNS+DTGSQVCALLWNKNEKEL
Sbjct: 339 THTGACLNSIDTGSQVCALLWNKNEKEL 366

BLAST of Spg005395 vs. ExPASy TrEMBL
Match: A0A6J1JY99 (cell division cycle 20.2, cofactor of APC complex-like OS=Cucurbita maxima OX=3661 GN=LOC111490848 PE=3 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 2.1e-41
Identity = 80/88 (90.91%), Postives = 85/88 (96.59%), Query Frame = 0

Query: 399 HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWN 458
           +DNVLH+WD+SMASSNS TQWLHRLE+HTSAVKALAWCPFQ NLLATGGGA DRTIKFWN
Sbjct: 282 NDNVLHIWDRSMASSNSATQWLHRLEDHTSAVKALAWCPFQSNLLATGGGASDRTIKFWN 341

Query: 459 THTGACLNSVDTGSQVCALLWNKNEKEL 487
           THTGACLNSVDTGSQVCALLWNKNE+EL
Sbjct: 342 THTGACLNSVDTGSQVCALLWNKNEREL 369

BLAST of Spg005395 vs. TAIR 10
Match: AT4G33270.1 (Transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 176.4 bits (446), Expect = 5.7e-44
Identity = 77/88 (87.50%), Postives = 85/88 (96.59%), Query Frame = 0

Query: 399 HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWN 458
           +DNV+H+WD+S+ASSNS TQWLHRLEEHTSAVKALAWCPFQ NLLATGGG GDRTIKFWN
Sbjct: 286 NDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGDRTIKFWN 345

Query: 459 THTGACLNSVDTGSQVCALLWNKNEKEL 487
           THTGACLNSVDTGSQVC+LLW+KNE+EL
Sbjct: 346 THTGACLNSVDTGSQVCSLLWSKNEREL 373

BLAST of Spg005395 vs. TAIR 10
Match: AT4G33260.1 (Transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 176.4 bits (446), Expect = 5.7e-44
Identity = 77/88 (87.50%), Postives = 85/88 (96.59%), Query Frame = 0

Query: 399 HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWN 458
           +DNV+H+WD+S+ASSNS TQWLHRLEEHTSAVKALAWCPFQ NLLATGGG GDRTIKFWN
Sbjct: 276 NDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGDRTIKFWN 335

Query: 459 THTGACLNSVDTGSQVCALLWNKNEKEL 487
           THTGACLNSVDTGSQVC+LLW+KNE+EL
Sbjct: 336 THTGACLNSVDTGSQVCSLLWSKNEREL 363

BLAST of Spg005395 vs. TAIR 10
Match: AT4G33260.2 (Transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 176.4 bits (446), Expect = 5.7e-44
Identity = 77/88 (87.50%), Postives = 85/88 (96.59%), Query Frame = 0

Query: 399 HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWN 458
           +DNV+H+WD+S+ASSNS TQWLHRLEEHTSAVKALAWCPFQ NLLATGGG GDRTIKFWN
Sbjct: 276 NDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGDRTIKFWN 335

Query: 459 THTGACLNSVDTGSQVCALLWNKNEKEL 487
           THTGACLNSVDTGSQVC+LLW+KNE+EL
Sbjct: 336 THTGACLNSVDTGSQVCSLLWSKNEREL 363

BLAST of Spg005395 vs. TAIR 10
Match: AT5G27945.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 156.4 bits (394), Expect = 6.1e-38
Identity = 66/88 (75.00%), Postives = 79/88 (89.77%), Query Frame = 0

Query: 399 HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWN 458
           +DNV+H+WD+S+ASSN   QWLHR EEHT+AV+ALAWCPFQ +LLATGGG GD  I FWN
Sbjct: 256 NDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDGKINFWN 315

Query: 459 THTGACLNSVDTGSQVCALLWNKNEKEL 487
           THTGACLNSV+TGSQVC+LLW+K+E+EL
Sbjct: 316 THTGACLNSVETGSQVCSLLWSKSEREL 343

BLAST of Spg005395 vs. TAIR 10
Match: AT5G26900.1 (Transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 154.8 bits (390), Expect = 1.8e-37
Identity = 65/88 (73.86%), Postives = 79/88 (89.77%), Query Frame = 0

Query: 399 HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWN 458
           +DNV+H+WD+S+ASS    QWLHR EEHT+AV+ALAWCPFQ +LLATGGG GD  IKFWN
Sbjct: 272 NDNVVHIWDRSLASSKQTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDGKIKFWN 331

Query: 459 THTGACLNSVDTGSQVCALLWNKNEKEL 487
           THTGACLNSV+TGSQVC+LLW+++E+EL
Sbjct: 332 THTGACLNSVETGSQVCSLLWSQSEREL 359

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004149610.11.7e-4293.18cell division cycle 20.2, cofactor of APC complex [Cucumis sativus] >KGN58619.1 ... [more]
XP_008461771.12.9e-4293.18PREDICTED: cell division cycle 20.2, cofactor of APC complex-like [Cucumis melo]... [more]
TXG47997.11.5e-4190.91hypothetical protein EZV62_027291 [Acer yangbiense][more]
XP_030533075.12.5e-4190.91cell division cycle 20.2, cofactor of APC complex-like [Rhodamnia argentea] >XP_... [more]
KAG6605663.14.2e-4190.91Cell division cycle 20.1, cofactor of APC complex, partial [Cucurbita argyrosper... [more]
Match NameE-valueIdentityDescription
Q9SZA48.0e-4387.50Cell division cycle 20.1, cofactor of APC complex OS=Arabidopsis thaliana OX=370... [more]
Q9S7I88.0e-4387.50Cell division cycle 20.2, cofactor of APC complex OS=Arabidopsis thaliana OX=370... [more]
F4K5R68.6e-3775.00Cell division cycle 20.6, cofactor of APC complex OS=Arabidopsis thaliana OX=370... [more]
Q4PSE42.5e-3673.86Cell division cycle 20.4, cofactor of APC complex OS=Arabidopsis thaliana OX=370... [more]
Q3E9067.3e-3675.28Cell division cycle 20.5, cofactor of APC complex OS=Arabidopsis thaliana OX=370... [more]
Match NameE-valueIdentityDescription
A0A0A0LCG18.3e-4393.18WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G... [more]
A0A5D3CHD81.4e-4293.18Cell division cycle 20.2, cofactor of APC complex-like OS=Cucumis melo var. maku... [more]
A0A1S3CFY11.4e-4293.18cell division cycle 20.2, cofactor of APC complex-like OS=Cucumis melo OX=3656 G... [more]
A0A5C7GU387.1e-4290.91WD_REPEATS_REGION domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV... [more]
A0A6J1JY992.1e-4190.91cell division cycle 20.2, cofactor of APC complex-like OS=Cucurbita maxima OX=36... [more]
Match NameE-valueIdentityDescription
AT4G33270.15.7e-4487.50Transducin family protein / WD-40 repeat family protein [more]
AT4G33260.15.7e-4487.50Transducin family protein / WD-40 repeat family protein [more]
AT4G33260.25.7e-4487.50Transducin family protein / WD-40 repeat family protein [more]
AT5G27945.16.1e-3875.00Transducin/WD40 repeat-like superfamily protein [more]
AT5G26900.11.8e-3773.86Transducin family protein / WD-40 repeat family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 416..458
e-value: 2.2E-4
score: 30.6
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 396..499
e-value: 6.4E-26
score: 93.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 109..128
NoneNo IPR availablePANTHERPTHR19918:SF39TRANSDUCIN FAMILY PROTEIN/WD-40 REPEAT PROTEINcoord: 398..486
IPR033010The WD repeat Cdc20/Fizzy familyPANTHERPTHR19918CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATEDcoord: 398..486
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 398..485

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg005395.1Spg005395.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051301 cell division
biological_process GO:1905786 positive regulation of anaphase-promoting complex-dependent catabolic process
biological_process GO:1904668 positive regulation of ubiquitin protein ligase activity
cellular_component GO:0005680 anaphase-promoting complex
molecular_function GO:0010997 anaphase-promoting complex binding
molecular_function GO:0005515 protein binding
molecular_function GO:1990757 ubiquitin ligase activator activity
molecular_function GO:0097027 ubiquitin-protein transferase activator activity